data_1KSG # _entry.id 1KSG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1KSG pdb_00001ksg 10.2210/pdb1ksg/pdb RCSB RCSB015295 ? ? WWPDB D_1000015295 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1KSH 'Complex of Arl2 and PDE delta, crystal form 2 (native)' unspecified PDB 1KSJ 'Complex of Arl2 and PDE delta, crystal form 2 (SeMet)' unspecified PDB 1fzq 'Crystal Structure Of Murine Arl3-GDP' unspecified PDB 1doa ;Structure Of The Rho Family GTP-Binding Protein Cdc42 In Complex With The Multifunctional Regulator Rhogdi ; unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1KSG _pdbx_database_status.recvd_initial_deposition_date 2002-01-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hanzal-Bayer, M.' 1 'Renault, L.' 2 'Roversi, P.' 3 'Wittinghofer, A.' 4 'Hillig, R.C.' 5 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The complex of Arl2-GTP and PDE delta: from structure to function.' 'EMBO J.' 21 2095 2106 2002 EMJODG UK 0261-4189 0897 ? 11980706 10.1093/emboj/21.9.2095 1 ;Coexpression, copurification, crystallization and preliminary X-ray analysis of a complex of Arl2-GTP and PDE delta ; 'Acta Crystallogr.,Sect.D' 57 1167 1170 2001 ABCRE6 DK 0907-4449 0766 ? ? 10.1107/S0907444901009556 2 'Structural and biochemical properties show Arl3-GDP as a distinct GTP-binding protein' Structure 8 1239 1245 2000 STRUE6 UK 0969-2126 2005 ? ? '10.1016/S0969-2126(00)00531-1' 3 ;The delta subunit of rod specific cyclic GMP phosphodiesterase, PDE delta, interacts with the Arf-like protein Arl3 in a GTP specific manner ; 'FEBS Lett.' 458 55 59 1999 FEBLAL NE 0014-5793 0165 ? ? '10.1016/S0014-5793(99)01117-5' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hanzal-Bayer, M.' 1 ? primary 'Renault, L.' 2 ? primary 'Roversi, P.' 3 ? primary 'Wittinghofer, A.' 4 ? primary 'Hillig, R.C.' 5 ? 1 'Renault, L.' 6 ? 1 'Hanzal-Bayer, M.' 7 ? 1 'Hillig, R.C.' 8 ? 2 'Hillig, R.C.' 9 ? 2 'Hanzal-Bayer, M.' 10 ? 2 'Linari, M.' 11 ? 2 'Becker, J.' 12 ? 2 'Wittinghofer, A.' 13 ? 2 'Renault, L.' 14 ? 3 'Linari, M.' 15 ? 3 'Hanzal-Bayer, M.' 16 ? 3 'Becker, J.' 17 ? # _cell.entry_id 1KSG _cell.length_a 48.100 _cell.length_b 45.700 _cell.length_c 74.700 _cell.angle_alpha 90.00 _cell.angle_beta 94.00 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KSG _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'arf-like protein 2' 21034.053 1 ? S33L ? ? 2 polymer man ;RETINAL ROD RHODOPSIN-SENSITIVE CGMP 3',5'-CYCLIC PHOSPHODIESTERASE DELTA-SUBUNIT ; 17585.121 1 3.1.4.17 ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn "GUANOSINE-5'-TRIPHOSPHATE" 523.180 1 ? ? ? ? 5 water nat water 18.015 57 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'GMP-PDE DELTA, P17 PROTEIN' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSMGLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWR NYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCS AVTGEDLLPGIDWLLDDISSRVFTAD ; ;GSMGLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWR NYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCS AVTGEDLLPGIDWLLDDISSRVFTAD ; A ? 2 'polypeptide(L)' no no ;GSMSAKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRELNFSSTEQMEKFRLEQ KVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASVLTGNVIIETKFFDDDLLVSTSRVRLFYV ; ;GSMSAKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRELNFSSTEQMEKFRLEQ KVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASVLTGNVIIETKFFDDDLLVSTSRVRLFYV ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 MET n 1 4 GLY n 1 5 LEU n 1 6 LEU n 1 7 THR n 1 8 ILE n 1 9 LEU n 1 10 LYS n 1 11 LYS n 1 12 MET n 1 13 LYS n 1 14 GLN n 1 15 LYS n 1 16 GLU n 1 17 ARG n 1 18 GLU n 1 19 LEU n 1 20 ARG n 1 21 LEU n 1 22 LEU n 1 23 MET n 1 24 LEU n 1 25 GLY n 1 26 LEU n 1 27 ASP n 1 28 ASN n 1 29 ALA n 1 30 GLY n 1 31 LYS n 1 32 THR n 1 33 THR n 1 34 ILE n 1 35 LEU n 1 36 LYS n 1 37 LYS n 1 38 PHE n 1 39 ASN n 1 40 GLY n 1 41 GLU n 1 42 ASP n 1 43 VAL n 1 44 ASP n 1 45 THR n 1 46 ILE n 1 47 SER n 1 48 PRO n 1 49 THR n 1 50 LEU n 1 51 GLY n 1 52 PHE n 1 53 ASN n 1 54 ILE n 1 55 LYS n 1 56 THR n 1 57 LEU n 1 58 GLU n 1 59 HIS n 1 60 ARG n 1 61 GLY n 1 62 PHE n 1 63 LYS n 1 64 LEU n 1 65 ASN n 1 66 ILE n 1 67 TRP n 1 68 ASP n 1 69 VAL n 1 70 GLY n 1 71 GLY n 1 72 GLN n 1 73 LYS n 1 74 SER n 1 75 LEU n 1 76 ARG n 1 77 SER n 1 78 TYR n 1 79 TRP n 1 80 ARG n 1 81 ASN n 1 82 TYR n 1 83 PHE n 1 84 GLU n 1 85 SER n 1 86 THR n 1 87 ASP n 1 88 GLY n 1 89 LEU n 1 90 ILE n 1 91 TRP n 1 92 VAL n 1 93 VAL n 1 94 ASP n 1 95 SER n 1 96 ALA n 1 97 ASP n 1 98 ARG n 1 99 GLN n 1 100 ARG n 1 101 MET n 1 102 GLN n 1 103 ASP n 1 104 CYS n 1 105 GLN n 1 106 ARG n 1 107 GLU n 1 108 LEU n 1 109 GLN n 1 110 SER n 1 111 LEU n 1 112 LEU n 1 113 VAL n 1 114 GLU n 1 115 GLU n 1 116 ARG n 1 117 LEU n 1 118 ALA n 1 119 GLY n 1 120 ALA n 1 121 THR n 1 122 LEU n 1 123 LEU n 1 124 ILE n 1 125 PHE n 1 126 ALA n 1 127 ASN n 1 128 LYS n 1 129 GLN n 1 130 ASP n 1 131 LEU n 1 132 PRO n 1 133 GLY n 1 134 ALA n 1 135 LEU n 1 136 SER n 1 137 CYS n 1 138 ASN n 1 139 ALA n 1 140 ILE n 1 141 GLN n 1 142 GLU n 1 143 ALA n 1 144 LEU n 1 145 GLU n 1 146 LEU n 1 147 ASP n 1 148 SER n 1 149 ILE n 1 150 ARG n 1 151 SER n 1 152 HIS n 1 153 HIS n 1 154 TRP n 1 155 ARG n 1 156 ILE n 1 157 GLN n 1 158 GLY n 1 159 CYS n 1 160 SER n 1 161 ALA n 1 162 VAL n 1 163 THR n 1 164 GLY n 1 165 GLU n 1 166 ASP n 1 167 LEU n 1 168 LEU n 1 169 PRO n 1 170 GLY n 1 171 ILE n 1 172 ASP n 1 173 TRP n 1 174 LEU n 1 175 LEU n 1 176 ASP n 1 177 ASP n 1 178 ILE n 1 179 SER n 1 180 SER n 1 181 ARG n 1 182 VAL n 1 183 PHE n 1 184 THR n 1 185 ALA n 1 186 ASP n 2 1 GLY n 2 2 SER n 2 3 MET n 2 4 SER n 2 5 ALA n 2 6 LYS n 2 7 ASP n 2 8 GLU n 2 9 ARG n 2 10 ALA n 2 11 ARG n 2 12 GLU n 2 13 ILE n 2 14 LEU n 2 15 ARG n 2 16 GLY n 2 17 PHE n 2 18 LYS n 2 19 LEU n 2 20 ASN n 2 21 TRP n 2 22 MET n 2 23 ASN n 2 24 LEU n 2 25 ARG n 2 26 ASP n 2 27 ALA n 2 28 GLU n 2 29 THR n 2 30 GLY n 2 31 LYS n 2 32 ILE n 2 33 LEU n 2 34 TRP n 2 35 GLN n 2 36 GLY n 2 37 THR n 2 38 GLU n 2 39 ASP n 2 40 LEU n 2 41 SER n 2 42 VAL n 2 43 PRO n 2 44 GLY n 2 45 VAL n 2 46 GLU n 2 47 HIS n 2 48 GLU n 2 49 ALA n 2 50 ARG n 2 51 VAL n 2 52 PRO n 2 53 LYS n 2 54 LYS n 2 55 ILE n 2 56 LEU n 2 57 LYS n 2 58 CYS n 2 59 LYS n 2 60 ALA n 2 61 VAL n 2 62 SER n 2 63 ARG n 2 64 GLU n 2 65 LEU n 2 66 ASN n 2 67 PHE n 2 68 SER n 2 69 SER n 2 70 THR n 2 71 GLU n 2 72 GLN n 2 73 MET n 2 74 GLU n 2 75 LYS n 2 76 PHE n 2 77 ARG n 2 78 LEU n 2 79 GLU n 2 80 GLN n 2 81 LYS n 2 82 VAL n 2 83 TYR n 2 84 PHE n 2 85 LYS n 2 86 GLY n 2 87 GLN n 2 88 CYS n 2 89 LEU n 2 90 GLU n 2 91 GLU n 2 92 TRP n 2 93 PHE n 2 94 PHE n 2 95 GLU n 2 96 PHE n 2 97 GLY n 2 98 PHE n 2 99 VAL n 2 100 ILE n 2 101 PRO n 2 102 ASN n 2 103 SER n 2 104 THR n 2 105 ASN n 2 106 THR n 2 107 TRP n 2 108 GLN n 2 109 SER n 2 110 LEU n 2 111 ILE n 2 112 GLU n 2 113 ALA n 2 114 ALA n 2 115 PRO n 2 116 GLU n 2 117 SER n 2 118 GLN n 2 119 MET n 2 120 MET n 2 121 PRO n 2 122 ALA n 2 123 SER n 2 124 VAL n 2 125 LEU n 2 126 THR n 2 127 GLY n 2 128 ASN n 2 129 VAL n 2 130 ILE n 2 131 ILE n 2 132 GLU n 2 133 THR n 2 134 LYS n 2 135 PHE n 2 136 PHE n 2 137 ASP n 2 138 ASP n 2 139 ASP n 2 140 LEU n 2 141 LEU n 2 142 VAL n 2 143 SER n 2 144 THR n 2 145 SER n 2 146 ARG n 2 147 VAL n 2 148 ARG n 2 149 LEU n 2 150 PHE n 2 151 TYR n 2 152 VAL n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? 'house mouse' Mus ARL2 ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? B834 ? ? ? ? ? ? ? plasmid ? ? ? 'pGEX KG' ? ? 2 1 sample ? ? ? human Homo 'PDE6D or PDED' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? B834 ? ? ? ? ? ? ? plasmid ? ? ? pET28a ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP ARL2_MOUSE 1 ;MGLLTILKKMKQKERELRLLMLGLDNAGKTTISKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNY FESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAV TGEDLLPGIDWLLDDISSRVFTAD ; 1 Q9D0J4 ? 2 UNP PDE6D_HUMAN 2 ;MSAKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRELNFSSTEQMEKFRLEQKV YFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASVLTGNVIIETKFFDDDLLVSTSRVRLFYV ; 1 O43924 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1KSG A 3 ? 186 ? Q9D0J4 1 ? 184 ? 1 184 2 2 1KSG B 3 ? 152 ? O43924 1 ? 150 ? 1 150 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1KSG GLY A 1 ? UNP Q9D0J4 ? ? 'cloning artifact' -1 1 1 1KSG SER A 2 ? UNP Q9D0J4 ? ? 'cloning artifact' 0 2 1 1KSG LEU A 35 ? UNP Q9D0J4 SER 33 'engineered mutation' 33 3 2 1KSG GLY B 1 ? UNP O43924 ? ? 'cloning artifact' -1 4 2 1KSG SER B 2 ? UNP O43924 ? ? 'cloning artifact' 0 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1KSG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.1 _exptl_crystal.density_percent_sol 40.8 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details ;PEG 5000 MME, HEPES, MgCl2, beta mercaptoethanol, GTP, glycerol as cryo protectant, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2000-02-21 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.782 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID13' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID13 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.782 # _reflns.entry_id 1KSG _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 19.7 _reflns.d_resolution_high 2.3 _reflns.number_obs 14251 _reflns.number_all 14251 _reflns.percent_possible_obs 97.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.0650000 _reflns.pdbx_netI_over_sigmaI 14.8 _reflns.B_iso_Wilson_estimate 27.9 _reflns.pdbx_redundancy 2.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.3 _reflns_shell.d_res_low 2.35 _reflns_shell.percent_possible_all 99.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.2350000 _reflns_shell.meanI_over_sigI_obs 5.8 _reflns_shell.pdbx_redundancy 3.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1KSG _refine.ls_number_reflns_obs 14238 _refine.ls_number_reflns_all 14238 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 901500.34 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.ls_d_res_low 19.73 _refine.ls_d_res_high 2.3 _refine.ls_percent_reflns_obs 97.4 _refine.ls_R_factor_obs 0.2600000 _refine.ls_R_factor_all 0.2600000 _refine.ls_R_factor_R_work 0.2550000 _refine.ls_R_factor_R_free 0.3010000 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.9 _refine.ls_number_reflns_R_free 1406 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 45.1 _refine.aniso_B[1][1] 7.91 _refine.aniso_B[2][2] -3.48 _refine.aniso_B[3][3] -4.42 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 5.12 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.369833 _refine.solvent_model_param_bsol 45.5746 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'ARL3-GDP, pdb entry 1fzq' _refine.pdbx_method_to_determine_struct 'combination of Molecular Replacement and SAD phasing' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1KSG _refine_analyze.Luzzati_coordinate_error_obs 0.35 _refine_analyze.Luzzati_sigma_a_obs 0.34 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.48 _refine_analyze.Luzzati_sigma_a_free 0.46 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2507 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 33 _refine_hist.number_atoms_solvent 57 _refine_hist.number_atoms_total 2597 _refine_hist.d_res_high 2.3 _refine_hist.d_res_low 19.73 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 2.0 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 25.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.12 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.3 _refine_ls_shell.d_res_low 2.44 _refine_ls_shell.number_reflns_R_work 2137 _refine_ls_shell.R_factor_R_work 0.3140000 _refine_ls_shell.percent_reflns_obs 99.2 _refine_ls_shell.R_factor_R_free 0.3900000 _refine_ls_shell.R_factor_R_free_error 0.025 _refine_ls_shell.percent_reflns_R_free 10.5 _refine_ls_shell.number_reflns_R_free 250 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 ION.PARAM ? 'X-RAY DIFFRACTION' 3 GTP.PARAM ? 'X-RAY DIFFRACTION' 4 WATER_REP.PARAM ? 'X-RAY DIFFRACTION' # _struct.entry_id 1KSG _struct.title 'Complex of Arl2 and PDE delta, Crystal Form 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1KSG _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN/HYDROLASE' _struct_keywords.text ;small GTPase, small GTP-binding protein, Arf family, effector molecule, immunoglobuline-like fold, GDI, SIGNALING PROTEIN-HYDROLASE COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.details ;The deposited coordinates represent the biological assembly (consisting of one Arl2 molecule (bound to GDP/PO4) and one PDE delta molecule) ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MET A 3 ? LYS A 15 ? MET A 1 LYS A 13 1 ? 13 HELX_P HELX_P2 2 GLY A 30 ? PHE A 38 ? GLY A 28 PHE A 36 1 ? 9 HELX_P HELX_P3 3 GLN A 72 ? PHE A 83 ? GLN A 70 PHE A 81 5 ? 12 HELX_P HELX_P4 4 ARG A 100 ? VAL A 113 ? ARG A 98 VAL A 111 1 ? 14 HELX_P HELX_P5 5 GLU A 114 ? ALA A 118 ? GLU A 112 ALA A 116 5 ? 5 HELX_P HELX_P6 6 SER A 136 ? LEU A 144 ? SER A 134 LEU A 142 1 ? 9 HELX_P HELX_P7 7 GLU A 145 ? ILE A 149 ? GLU A 143 ILE A 147 5 ? 5 HELX_P HELX_P8 8 ASP A 166 ? ARG A 181 ? ASP A 164 ARG A 179 1 ? 16 HELX_P HELX_P9 9 ASP B 7 ? GLY B 16 ? ASP B 5 GLY B 14 1 ? 10 HELX_P HELX_P10 10 PRO B 52 ? CYS B 58 ? PRO B 50 CYS B 56 5 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A THR 32 OG1 ? ? ? 1_555 C MG . MG ? ? A THR 30 A MG 202 1_555 ? ? ? ? ? ? ? 2.318 ? ? metalc2 metalc ? ? A THR 49 OG1 ? ? ? 1_555 C MG . MG ? ? A THR 47 A MG 202 1_555 ? ? ? ? ? ? ? 2.229 ? ? metalc3 metalc ? ? D GTP . O2G ? ? ? 1_555 C MG . MG ? ? A GTP 201 A MG 202 1_555 ? ? ? ? ? ? ? 2.262 ? ? metalc4 metalc ? ? D GTP . O2B ? ? ? 1_555 C MG . MG ? ? A GTP 201 A MG 202 1_555 ? ? ? ? ? ? ? 2.170 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 202 A HOH 206 1_555 ? ? ? ? ? ? ? 2.441 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 202 A HOH 210 1_555 ? ? ? ? ? ? ? 2.440 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 10 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel A 6 7 ? parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TRP A 154 ? GLY A 158 ? TRP A 152 GLY A 156 A 2 THR A 121 ? ASN A 127 ? THR A 119 ASN A 125 A 3 GLY A 88 ? ASP A 94 ? GLY A 86 ASP A 92 A 4 GLU A 18 ? LEU A 24 ? GLU A 16 LEU A 22 A 5 LYS A 63 ? VAL A 69 ? LYS A 61 VAL A 67 A 6 PHE A 52 ? THR A 56 ? PHE A 50 THR A 54 A 7 SER B 103 ? LEU B 110 ? SER B 101 LEU B 108 A 8 VAL B 61 ? SER B 69 ? VAL B 59 SER B 67 A 9 PHE B 17 ? ASP B 26 ? PHE B 15 ASP B 24 A 10 ILE B 32 ? GLY B 36 ? ILE B 30 GLY B 34 B 1 GLU B 90 ? VAL B 99 ? GLU B 88 VAL B 97 B 2 MET B 73 ? VAL B 82 ? MET B 71 VAL B 80 B 3 GLU B 132 ? ASP B 137 ? GLU B 130 ASP B 135 B 4 LEU B 140 ? ARG B 146 ? LEU B 138 ARG B 144 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLN A 157 ? O GLN A 155 N ILE A 124 ? N ILE A 122 A 2 3 O THR A 121 ? O THR A 119 N LEU A 89 ? N LEU A 87 A 3 4 O ILE A 90 ? O ILE A 88 N LEU A 22 ? N LEU A 20 A 4 5 N MET A 23 ? N MET A 21 O TRP A 67 ? O TRP A 65 A 5 6 O ASP A 68 ? O ASP A 66 N ASN A 53 ? N ASN A 51 A 6 7 N ILE A 54 ? N ILE A 52 O THR B 106 ? O THR B 104 A 7 8 O ASN B 105 ? O ASN B 103 N PHE B 67 ? N PHE B 65 A 8 9 O SER B 68 ? O SER B 66 N LYS B 18 ? N LYS B 16 A 9 10 N LEU B 24 ? N LEU B 22 O LEU B 33 ? O LEU B 31 B 1 2 O TRP B 92 ? O TRP B 90 N GLN B 80 ? N GLN B 78 B 2 3 N GLU B 79 ? N GLU B 77 O LYS B 134 ? O LYS B 132 B 3 4 N PHE B 135 ? N PHE B 133 O VAL B 142 ? O VAL B 140 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 202 ? 5 'BINDING SITE FOR RESIDUE MG A 202' AC2 Software A GTP 201 ? 24 'BINDING SITE FOR RESIDUE GTP A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 THR A 32 ? THR A 30 . ? 1_555 ? 2 AC1 5 THR A 49 ? THR A 47 . ? 1_555 ? 3 AC1 5 GTP D . ? GTP A 201 . ? 1_555 ? 4 AC1 5 HOH E . ? HOH A 206 . ? 1_555 ? 5 AC1 5 HOH E . ? HOH A 210 . ? 1_555 ? 6 AC2 24 ASP A 27 ? ASP A 25 . ? 1_555 ? 7 AC2 24 ASN A 28 ? ASN A 26 . ? 1_555 ? 8 AC2 24 ALA A 29 ? ALA A 27 . ? 1_555 ? 9 AC2 24 GLY A 30 ? GLY A 28 . ? 1_555 ? 10 AC2 24 LYS A 31 ? LYS A 29 . ? 1_555 ? 11 AC2 24 THR A 32 ? THR A 30 . ? 1_555 ? 12 AC2 24 THR A 33 ? THR A 31 . ? 1_555 ? 13 AC2 24 PRO A 48 ? PRO A 46 . ? 1_555 ? 14 AC2 24 THR A 49 ? THR A 47 . ? 1_555 ? 15 AC2 24 GLY A 70 ? GLY A 68 . ? 1_555 ? 16 AC2 24 GLY A 71 ? GLY A 69 . ? 1_555 ? 17 AC2 24 ASN A 127 ? ASN A 125 . ? 1_555 ? 18 AC2 24 LYS A 128 ? LYS A 126 . ? 1_555 ? 19 AC2 24 ASP A 130 ? ASP A 128 . ? 1_555 ? 20 AC2 24 LEU A 131 ? LEU A 129 . ? 1_555 ? 21 AC2 24 SER A 160 ? SER A 158 . ? 1_555 ? 22 AC2 24 ALA A 161 ? ALA A 159 . ? 1_555 ? 23 AC2 24 VAL A 162 ? VAL A 160 . ? 1_555 ? 24 AC2 24 MG C . ? MG A 202 . ? 1_555 ? 25 AC2 24 HOH E . ? HOH A 206 . ? 1_555 ? 26 AC2 24 HOH E . ? HOH A 210 . ? 1_555 ? 27 AC2 24 HOH E . ? HOH A 214 . ? 1_555 ? 28 AC2 24 GLN B 87 ? GLN B 85 . ? 1_545 ? 29 AC2 24 CYS B 88 ? CYS B 86 . ? 1_545 ? # _database_PDB_matrix.entry_id 1KSG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1KSG _atom_sites.fract_transf_matrix[1][1] 0.020790 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001454 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021882 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013420 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 SER 2 0 0 SER SER A . n A 1 3 MET 3 1 1 MET MET A . n A 1 4 GLY 4 2 2 GLY GLY A . n A 1 5 LEU 5 3 3 LEU LEU A . n A 1 6 LEU 6 4 4 LEU LEU A . n A 1 7 THR 7 5 5 THR THR A . n A 1 8 ILE 8 6 6 ILE ILE A . n A 1 9 LEU 9 7 7 LEU LEU A . n A 1 10 LYS 10 8 8 LYS LYS A . n A 1 11 LYS 11 9 9 LYS LYS A . n A 1 12 MET 12 10 10 MET MET A . n A 1 13 LYS 13 11 11 LYS LYS A . n A 1 14 GLN 14 12 12 GLN GLN A . n A 1 15 LYS 15 13 13 LYS LYS A . n A 1 16 GLU 16 14 14 GLU GLU A . n A 1 17 ARG 17 15 15 ARG ARG A . n A 1 18 GLU 18 16 16 GLU GLU A . n A 1 19 LEU 19 17 17 LEU LEU A . n A 1 20 ARG 20 18 18 ARG ARG A . n A 1 21 LEU 21 19 19 LEU LEU A . n A 1 22 LEU 22 20 20 LEU LEU A . n A 1 23 MET 23 21 21 MET MET A . n A 1 24 LEU 24 22 22 LEU LEU A . n A 1 25 GLY 25 23 23 GLY GLY A . n A 1 26 LEU 26 24 24 LEU LEU A . n A 1 27 ASP 27 25 25 ASP ASP A . n A 1 28 ASN 28 26 26 ASN ASN A . n A 1 29 ALA 29 27 27 ALA ALA A . n A 1 30 GLY 30 28 28 GLY GLY A . n A 1 31 LYS 31 29 29 LYS LYS A . n A 1 32 THR 32 30 30 THR THR A . n A 1 33 THR 33 31 31 THR THR A . n A 1 34 ILE 34 32 32 ILE ILE A . n A 1 35 LEU 35 33 33 LEU LEU A . n A 1 36 LYS 36 34 34 LYS LYS A . n A 1 37 LYS 37 35 35 LYS LYS A . n A 1 38 PHE 38 36 36 PHE PHE A . n A 1 39 ASN 39 37 37 ASN ASN A . n A 1 40 GLY 40 38 38 GLY GLY A . n A 1 41 GLU 41 39 39 GLU GLU A . n A 1 42 ASP 42 40 40 ASP ASP A . n A 1 43 VAL 43 41 41 VAL VAL A . n A 1 44 ASP 44 42 42 ASP ASP A . n A 1 45 THR 45 43 43 THR THR A . n A 1 46 ILE 46 44 44 ILE ILE A . n A 1 47 SER 47 45 45 SER SER A . n A 1 48 PRO 48 46 46 PRO PRO A . n A 1 49 THR 49 47 47 THR THR A . n A 1 50 LEU 50 48 48 LEU LEU A . n A 1 51 GLY 51 49 49 GLY GLY A . n A 1 52 PHE 52 50 50 PHE PHE A . n A 1 53 ASN 53 51 51 ASN ASN A . n A 1 54 ILE 54 52 52 ILE ILE A . n A 1 55 LYS 55 53 53 LYS LYS A . n A 1 56 THR 56 54 54 THR THR A . n A 1 57 LEU 57 55 55 LEU LEU A . n A 1 58 GLU 58 56 56 GLU GLU A . n A 1 59 HIS 59 57 57 HIS HIS A . n A 1 60 ARG 60 58 58 ARG ARG A . n A 1 61 GLY 61 59 59 GLY GLY A . n A 1 62 PHE 62 60 60 PHE PHE A . n A 1 63 LYS 63 61 61 LYS LYS A . n A 1 64 LEU 64 62 62 LEU LEU A . n A 1 65 ASN 65 63 63 ASN ASN A . n A 1 66 ILE 66 64 64 ILE ILE A . n A 1 67 TRP 67 65 65 TRP TRP A . n A 1 68 ASP 68 66 66 ASP ASP A . n A 1 69 VAL 69 67 67 VAL VAL A . n A 1 70 GLY 70 68 68 GLY GLY A . n A 1 71 GLY 71 69 69 GLY GLY A . n A 1 72 GLN 72 70 70 GLN GLN A . n A 1 73 LYS 73 71 71 LYS LYS A . n A 1 74 SER 74 72 72 SER SER A . n A 1 75 LEU 75 73 73 LEU LEU A . n A 1 76 ARG 76 74 74 ARG ARG A . n A 1 77 SER 77 75 75 SER SER A . n A 1 78 TYR 78 76 76 TYR TYR A . n A 1 79 TRP 79 77 77 TRP TRP A . n A 1 80 ARG 80 78 78 ARG ARG A . n A 1 81 ASN 81 79 79 ASN ASN A . n A 1 82 TYR 82 80 80 TYR TYR A . n A 1 83 PHE 83 81 81 PHE PHE A . n A 1 84 GLU 84 82 82 GLU GLU A . n A 1 85 SER 85 83 83 SER SER A . n A 1 86 THR 86 84 84 THR THR A . n A 1 87 ASP 87 85 85 ASP ASP A . n A 1 88 GLY 88 86 86 GLY GLY A . n A 1 89 LEU 89 87 87 LEU LEU A . n A 1 90 ILE 90 88 88 ILE ILE A . n A 1 91 TRP 91 89 89 TRP TRP A . n A 1 92 VAL 92 90 90 VAL VAL A . n A 1 93 VAL 93 91 91 VAL VAL A . n A 1 94 ASP 94 92 92 ASP ASP A . n A 1 95 SER 95 93 93 SER SER A . n A 1 96 ALA 96 94 94 ALA ALA A . n A 1 97 ASP 97 95 95 ASP ASP A . n A 1 98 ARG 98 96 96 ARG ARG A . n A 1 99 GLN 99 97 97 GLN GLN A . n A 1 100 ARG 100 98 98 ARG ARG A . n A 1 101 MET 101 99 99 MET MET A . n A 1 102 GLN 102 100 100 GLN GLN A . n A 1 103 ASP 103 101 101 ASP ASP A . n A 1 104 CYS 104 102 102 CYS CYS A . n A 1 105 GLN 105 103 103 GLN GLN A . n A 1 106 ARG 106 104 104 ARG ARG A . n A 1 107 GLU 107 105 105 GLU GLU A . n A 1 108 LEU 108 106 106 LEU LEU A . n A 1 109 GLN 109 107 107 GLN GLN A . n A 1 110 SER 110 108 108 SER SER A . n A 1 111 LEU 111 109 109 LEU LEU A . n A 1 112 LEU 112 110 110 LEU LEU A . n A 1 113 VAL 113 111 111 VAL VAL A . n A 1 114 GLU 114 112 112 GLU GLU A . n A 1 115 GLU 115 113 113 GLU GLU A . n A 1 116 ARG 116 114 114 ARG ARG A . n A 1 117 LEU 117 115 115 LEU LEU A . n A 1 118 ALA 118 116 116 ALA ALA A . n A 1 119 GLY 119 117 117 GLY GLY A . n A 1 120 ALA 120 118 118 ALA ALA A . n A 1 121 THR 121 119 119 THR THR A . n A 1 122 LEU 122 120 120 LEU LEU A . n A 1 123 LEU 123 121 121 LEU LEU A . n A 1 124 ILE 124 122 122 ILE ILE A . n A 1 125 PHE 125 123 123 PHE PHE A . n A 1 126 ALA 126 124 124 ALA ALA A . n A 1 127 ASN 127 125 125 ASN ASN A . n A 1 128 LYS 128 126 126 LYS LYS A . n A 1 129 GLN 129 127 127 GLN GLN A . n A 1 130 ASP 130 128 128 ASP ASP A . n A 1 131 LEU 131 129 129 LEU LEU A . n A 1 132 PRO 132 130 130 PRO PRO A . n A 1 133 GLY 133 131 131 GLY GLY A . n A 1 134 ALA 134 132 132 ALA ALA A . n A 1 135 LEU 135 133 133 LEU LEU A . n A 1 136 SER 136 134 134 SER SER A . n A 1 137 CYS 137 135 135 CYS CYS A . n A 1 138 ASN 138 136 136 ASN ASN A . n A 1 139 ALA 139 137 137 ALA ALA A . n A 1 140 ILE 140 138 138 ILE ILE A . n A 1 141 GLN 141 139 139 GLN GLN A . n A 1 142 GLU 142 140 140 GLU GLU A . n A 1 143 ALA 143 141 141 ALA ALA A . n A 1 144 LEU 144 142 142 LEU LEU A . n A 1 145 GLU 145 143 143 GLU GLU A . n A 1 146 LEU 146 144 144 LEU LEU A . n A 1 147 ASP 147 145 145 ASP ASP A . n A 1 148 SER 148 146 146 SER SER A . n A 1 149 ILE 149 147 147 ILE ILE A . n A 1 150 ARG 150 148 148 ARG ARG A . n A 1 151 SER 151 149 149 SER SER A . n A 1 152 HIS 152 150 150 HIS HIS A . n A 1 153 HIS 153 151 151 HIS HIS A . n A 1 154 TRP 154 152 152 TRP TRP A . n A 1 155 ARG 155 153 153 ARG ARG A . n A 1 156 ILE 156 154 154 ILE ILE A . n A 1 157 GLN 157 155 155 GLN GLN A . n A 1 158 GLY 158 156 156 GLY GLY A . n A 1 159 CYS 159 157 157 CYS CYS A . n A 1 160 SER 160 158 158 SER SER A . n A 1 161 ALA 161 159 159 ALA ALA A . n A 1 162 VAL 162 160 160 VAL VAL A . n A 1 163 THR 163 161 161 THR THR A . n A 1 164 GLY 164 162 162 GLY GLY A . n A 1 165 GLU 165 163 163 GLU GLU A . n A 1 166 ASP 166 164 164 ASP ASP A . n A 1 167 LEU 167 165 165 LEU LEU A . n A 1 168 LEU 168 166 166 LEU LEU A . n A 1 169 PRO 169 167 167 PRO PRO A . n A 1 170 GLY 170 168 168 GLY GLY A . n A 1 171 ILE 171 169 169 ILE ILE A . n A 1 172 ASP 172 170 170 ASP ASP A . n A 1 173 TRP 173 171 171 TRP TRP A . n A 1 174 LEU 174 172 172 LEU LEU A . n A 1 175 LEU 175 173 173 LEU LEU A . n A 1 176 ASP 176 174 174 ASP ASP A . n A 1 177 ASP 177 175 175 ASP ASP A . n A 1 178 ILE 178 176 176 ILE ILE A . n A 1 179 SER 179 177 177 SER SER A . n A 1 180 SER 180 178 178 SER SER A . n A 1 181 ARG 181 179 179 ARG ARG A . n A 1 182 VAL 182 180 ? ? ? A . n A 1 183 PHE 183 181 ? ? ? A . n A 1 184 THR 184 182 ? ? ? A . n A 1 185 ALA 185 183 ? ? ? A . n A 1 186 ASP 186 184 ? ? ? A . n B 2 1 GLY 1 -1 ? ? ? B . n B 2 2 SER 2 0 ? ? ? B . n B 2 3 MET 3 1 ? ? ? B . n B 2 4 SER 4 2 ? ? ? B . n B 2 5 ALA 5 3 ? ? ? B . n B 2 6 LYS 6 4 4 LYS LYS B . n B 2 7 ASP 7 5 5 ASP ASP B . n B 2 8 GLU 8 6 6 GLU GLU B . n B 2 9 ARG 9 7 7 ARG ARG B . n B 2 10 ALA 10 8 8 ALA ALA B . n B 2 11 ARG 11 9 9 ARG ARG B . n B 2 12 GLU 12 10 10 GLU GLU B . n B 2 13 ILE 13 11 11 ILE ILE B . n B 2 14 LEU 14 12 12 LEU LEU B . n B 2 15 ARG 15 13 13 ARG ARG B . n B 2 16 GLY 16 14 14 GLY GLY B . n B 2 17 PHE 17 15 15 PHE PHE B . n B 2 18 LYS 18 16 16 LYS LYS B . n B 2 19 LEU 19 17 17 LEU LEU B . n B 2 20 ASN 20 18 18 ASN ASN B . n B 2 21 TRP 21 19 19 TRP TRP B . n B 2 22 MET 22 20 20 MET MET B . n B 2 23 ASN 23 21 21 ASN ASN B . n B 2 24 LEU 24 22 22 LEU LEU B . n B 2 25 ARG 25 23 23 ARG ARG B . n B 2 26 ASP 26 24 24 ASP ASP B . n B 2 27 ALA 27 25 25 ALA ALA B . n B 2 28 GLU 28 26 26 GLU GLU B . n B 2 29 THR 29 27 27 THR THR B . n B 2 30 GLY 30 28 28 GLY GLY B . n B 2 31 LYS 31 29 29 LYS LYS B . n B 2 32 ILE 32 30 30 ILE ILE B . n B 2 33 LEU 33 31 31 LEU LEU B . n B 2 34 TRP 34 32 32 TRP TRP B . n B 2 35 GLN 35 33 33 GLN GLN B . n B 2 36 GLY 36 34 34 GLY GLY B . n B 2 37 THR 37 35 35 THR THR B . n B 2 38 GLU 38 36 36 GLU GLU B . n B 2 39 ASP 39 37 37 ASP ASP B . n B 2 40 LEU 40 38 38 LEU LEU B . n B 2 41 SER 41 39 39 SER SER B . n B 2 42 VAL 42 40 40 VAL VAL B . n B 2 43 PRO 43 41 41 PRO PRO B . n B 2 44 GLY 44 42 42 GLY GLY B . n B 2 45 VAL 45 43 43 VAL VAL B . n B 2 46 GLU 46 44 44 GLU GLU B . n B 2 47 HIS 47 45 45 HIS HIS B . n B 2 48 GLU 48 46 46 GLU GLU B . n B 2 49 ALA 49 47 47 ALA ALA B . n B 2 50 ARG 50 48 48 ARG ARG B . n B 2 51 VAL 51 49 49 VAL VAL B . n B 2 52 PRO 52 50 50 PRO PRO B . n B 2 53 LYS 53 51 51 LYS LYS B . n B 2 54 LYS 54 52 52 LYS LYS B . n B 2 55 ILE 55 53 53 ILE ILE B . n B 2 56 LEU 56 54 54 LEU LEU B . n B 2 57 LYS 57 55 55 LYS LYS B . n B 2 58 CYS 58 56 56 CYS CYS B . n B 2 59 LYS 59 57 57 LYS LYS B . n B 2 60 ALA 60 58 58 ALA ALA B . n B 2 61 VAL 61 59 59 VAL VAL B . n B 2 62 SER 62 60 60 SER SER B . n B 2 63 ARG 63 61 61 ARG ARG B . n B 2 64 GLU 64 62 62 GLU GLU B . n B 2 65 LEU 65 63 63 LEU LEU B . n B 2 66 ASN 66 64 64 ASN ASN B . n B 2 67 PHE 67 65 65 PHE PHE B . n B 2 68 SER 68 66 66 SER SER B . n B 2 69 SER 69 67 67 SER SER B . n B 2 70 THR 70 68 68 THR THR B . n B 2 71 GLU 71 69 69 GLU GLU B . n B 2 72 GLN 72 70 70 GLN GLN B . n B 2 73 MET 73 71 71 MET MET B . n B 2 74 GLU 74 72 72 GLU GLU B . n B 2 75 LYS 75 73 73 LYS LYS B . n B 2 76 PHE 76 74 74 PHE PHE B . n B 2 77 ARG 77 75 75 ARG ARG B . n B 2 78 LEU 78 76 76 LEU LEU B . n B 2 79 GLU 79 77 77 GLU GLU B . n B 2 80 GLN 80 78 78 GLN GLN B . n B 2 81 LYS 81 79 79 LYS LYS B . n B 2 82 VAL 82 80 80 VAL VAL B . n B 2 83 TYR 83 81 81 TYR TYR B . n B 2 84 PHE 84 82 82 PHE PHE B . n B 2 85 LYS 85 83 83 LYS LYS B . n B 2 86 GLY 86 84 84 GLY GLY B . n B 2 87 GLN 87 85 85 GLN GLN B . n B 2 88 CYS 88 86 86 CYS CYS B . n B 2 89 LEU 89 87 87 LEU LEU B . n B 2 90 GLU 90 88 88 GLU GLU B . n B 2 91 GLU 91 89 89 GLU GLU B . n B 2 92 TRP 92 90 90 TRP TRP B . n B 2 93 PHE 93 91 91 PHE PHE B . n B 2 94 PHE 94 92 92 PHE PHE B . n B 2 95 GLU 95 93 93 GLU GLU B . n B 2 96 PHE 96 94 94 PHE PHE B . n B 2 97 GLY 97 95 95 GLY GLY B . n B 2 98 PHE 98 96 96 PHE PHE B . n B 2 99 VAL 99 97 97 VAL VAL B . n B 2 100 ILE 100 98 98 ILE ILE B . n B 2 101 PRO 101 99 99 PRO PRO B . n B 2 102 ASN 102 100 100 ASN ASN B . n B 2 103 SER 103 101 101 SER SER B . n B 2 104 THR 104 102 102 THR THR B . n B 2 105 ASN 105 103 103 ASN ASN B . n B 2 106 THR 106 104 104 THR THR B . n B 2 107 TRP 107 105 105 TRP TRP B . n B 2 108 GLN 108 106 106 GLN GLN B . n B 2 109 SER 109 107 107 SER SER B . n B 2 110 LEU 110 108 108 LEU LEU B . n B 2 111 ILE 111 109 109 ILE ILE B . n B 2 112 GLU 112 110 ? ? ? B . n B 2 113 ALA 113 111 ? ? ? B . n B 2 114 ALA 114 112 ? ? ? B . n B 2 115 PRO 115 113 ? ? ? B . n B 2 116 GLU 116 114 ? ? ? B . n B 2 117 SER 117 115 ? ? ? B . n B 2 118 GLN 118 116 ? ? ? B . n B 2 119 MET 119 117 ? ? ? B . n B 2 120 MET 120 118 ? ? ? B . n B 2 121 PRO 121 119 ? ? ? B . n B 2 122 ALA 122 120 ? ? ? B . n B 2 123 SER 123 121 ? ? ? B . n B 2 124 VAL 124 122 ? ? ? B . n B 2 125 LEU 125 123 ? ? ? B . n B 2 126 THR 126 124 ? ? ? B . n B 2 127 GLY 127 125 ? ? ? B . n B 2 128 ASN 128 126 ? ? ? B . n B 2 129 VAL 129 127 ? ? ? B . n B 2 130 ILE 130 128 ? ? ? B . n B 2 131 ILE 131 129 129 ILE ILE B . n B 2 132 GLU 132 130 130 GLU GLU B . n B 2 133 THR 133 131 131 THR THR B . n B 2 134 LYS 134 132 132 LYS LYS B . n B 2 135 PHE 135 133 133 PHE PHE B . n B 2 136 PHE 136 134 134 PHE PHE B . n B 2 137 ASP 137 135 135 ASP ASP B . n B 2 138 ASP 138 136 136 ASP ASP B . n B 2 139 ASP 139 137 137 ASP ASP B . n B 2 140 LEU 140 138 138 LEU LEU B . n B 2 141 LEU 141 139 139 LEU LEU B . n B 2 142 VAL 142 140 140 VAL VAL B . n B 2 143 SER 143 141 141 SER SER B . n B 2 144 THR 144 142 142 THR THR B . n B 2 145 SER 145 143 143 SER SER B . n B 2 146 ARG 146 144 144 ARG ARG B . n B 2 147 VAL 147 145 145 VAL VAL B . n B 2 148 ARG 148 146 146 ARG ARG B . n B 2 149 LEU 149 147 147 LEU LEU B . n B 2 150 PHE 150 148 148 PHE PHE B . n B 2 151 TYR 151 149 149 TYR TYR B . n B 2 152 VAL 152 150 150 VAL VAL B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG 1 202 2 MG MG A . D 4 GTP 1 201 1 GTP GTP A . E 5 HOH 1 203 1 HOH WAT A . E 5 HOH 2 204 2 HOH WAT A . E 5 HOH 3 205 3 HOH WAT A . E 5 HOH 4 206 4 HOH WAT A . E 5 HOH 5 207 5 HOH WAT A . E 5 HOH 6 208 6 HOH WAT A . E 5 HOH 7 209 8 HOH WAT A . E 5 HOH 8 210 9 HOH WAT A . E 5 HOH 9 211 10 HOH WAT A . E 5 HOH 10 212 11 HOH WAT A . E 5 HOH 11 213 12 HOH WAT A . E 5 HOH 12 214 13 HOH WAT A . E 5 HOH 13 215 14 HOH WAT A . E 5 HOH 14 216 15 HOH WAT A . E 5 HOH 15 217 18 HOH WAT A . E 5 HOH 16 218 21 HOH WAT A . E 5 HOH 17 219 22 HOH WAT A . E 5 HOH 18 220 23 HOH WAT A . E 5 HOH 19 221 24 HOH WAT A . E 5 HOH 20 222 25 HOH WAT A . E 5 HOH 21 223 30 HOH WAT A . E 5 HOH 22 224 33 HOH WAT A . E 5 HOH 23 225 34 HOH WAT A . E 5 HOH 24 226 35 HOH WAT A . E 5 HOH 25 227 36 HOH WAT A . E 5 HOH 26 228 37 HOH WAT A . E 5 HOH 27 229 38 HOH WAT A . E 5 HOH 28 230 39 HOH WAT A . E 5 HOH 29 231 40 HOH WAT A . E 5 HOH 30 232 41 HOH WAT A . E 5 HOH 31 233 46 HOH WAT A . E 5 HOH 32 234 47 HOH WAT A . E 5 HOH 33 235 48 HOH WAT A . E 5 HOH 34 236 49 HOH WAT A . E 5 HOH 35 237 50 HOH WAT A . E 5 HOH 36 238 51 HOH WAT A . E 5 HOH 37 239 52 HOH WAT A . E 5 HOH 38 240 53 HOH WAT A . F 5 HOH 1 151 7 HOH WAT B . F 5 HOH 2 152 16 HOH WAT B . F 5 HOH 3 153 17 HOH WAT B . F 5 HOH 4 154 19 HOH WAT B . F 5 HOH 5 155 20 HOH WAT B . F 5 HOH 6 156 26 HOH WAT B . F 5 HOH 7 157 27 HOH WAT B . F 5 HOH 8 158 28 HOH WAT B . F 5 HOH 9 159 29 HOH WAT B . F 5 HOH 10 160 31 HOH WAT B . F 5 HOH 11 161 32 HOH WAT B . F 5 HOH 12 162 42 HOH WAT B . F 5 HOH 13 163 43 HOH WAT B . F 5 HOH 14 164 44 HOH WAT B . F 5 HOH 15 165 45 HOH WAT B . F 5 HOH 16 166 54 HOH WAT B . F 5 HOH 17 167 55 HOH WAT B . F 5 HOH 18 168 56 HOH WAT B . F 5 HOH 19 169 57 HOH WAT B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG1 ? A THR 32 ? A THR 30 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 OG1 ? A THR 49 ? A THR 47 ? 1_555 82.7 ? 2 OG1 ? A THR 32 ? A THR 30 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O2G ? D GTP . ? A GTP 201 ? 1_555 163.8 ? 3 OG1 ? A THR 49 ? A THR 47 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O2G ? D GTP . ? A GTP 201 ? 1_555 90.9 ? 4 OG1 ? A THR 32 ? A THR 30 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O2B ? D GTP . ? A GTP 201 ? 1_555 89.5 ? 5 OG1 ? A THR 49 ? A THR 47 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O2B ? D GTP . ? A GTP 201 ? 1_555 165.9 ? 6 O2G ? D GTP . ? A GTP 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O2B ? D GTP . ? A GTP 201 ? 1_555 93.5 ? 7 OG1 ? A THR 32 ? A THR 30 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 206 ? 1_555 95.5 ? 8 OG1 ? A THR 49 ? A THR 47 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 206 ? 1_555 91.1 ? 9 O2G ? D GTP . ? A GTP 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 206 ? 1_555 99.5 ? 10 O2B ? D GTP . ? A GTP 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 206 ? 1_555 101.4 ? 11 OG1 ? A THR 32 ? A THR 30 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 210 ? 1_555 79.2 ? 12 OG1 ? A THR 49 ? A THR 47 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 210 ? 1_555 88.2 ? 13 O2G ? D GTP . ? A GTP 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 210 ? 1_555 85.8 ? 14 O2B ? D GTP . ? A GTP 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 210 ? 1_555 78.7 ? 15 O ? E HOH . ? A HOH 206 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 210 ? 1_555 174.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-05-08 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-27 5 'Structure model' 1 4 2023-08-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_struct_conn_angle 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 29 4 'Structure model' '_struct_ref_seq_dif.details' 30 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 31 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 32 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal AMoRE phasing . ? 1 ARP/wARP 'model building' . ? 2 SHARP phasing '(SAD PHASING)' ? 3 CNS refinement 1.0 ? 4 DENZO 'data reduction' . ? 5 SCALEPACK 'data scaling' . ? 6 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N B ARG 48 ? ? CA B ARG 48 ? ? C B ARG 48 ? ? 127.37 111.00 16.37 2.70 N 2 1 C B VAL 49 ? ? N B PRO 50 ? ? CA B PRO 50 ? ? 129.93 119.30 10.63 1.50 Y 3 1 N B TYR 81 ? ? CA B TYR 81 ? ? C B TYR 81 ? ? 131.04 111.00 20.04 2.70 N 4 1 N B ARG 146 ? ? CA B ARG 146 ? ? C B ARG 146 ? ? 131.16 111.00 20.16 2.70 N 5 1 N B LEU 147 ? ? CA B LEU 147 ? ? C B LEU 147 ? ? 141.46 111.00 30.46 2.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 13 ? ? -96.20 30.12 2 1 GLU A 39 ? ? -141.30 -34.02 3 1 ASP A 40 ? ? -37.41 107.00 4 1 ASP A 42 ? ? 23.24 51.45 5 1 LEU A 48 ? ? -105.67 45.81 6 1 LEU A 55 ? ? -107.21 -139.71 7 1 GLU A 56 ? ? -176.31 118.95 8 1 GLU A 82 ? ? -38.60 126.11 9 1 ASP A 95 ? ? -111.42 62.25 10 1 MET A 99 ? ? -38.40 -34.04 11 1 ASP B 5 ? ? -153.18 0.82 12 1 GLU B 44 ? ? 56.46 89.60 13 1 PRO B 50 ? ? -23.13 110.21 14 1 LYS B 52 ? ? -62.91 11.88 15 1 LYS B 83 ? ? 43.26 -107.87 16 1 GLN B 85 ? ? -37.32 143.94 17 1 ASP B 136 ? ? 61.58 -108.61 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id TYR _pdbx_validate_planes.auth_asym_id B _pdbx_validate_planes.auth_seq_id 81 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.073 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A VAL 180 ? A VAL 182 3 1 Y 1 A PHE 181 ? A PHE 183 4 1 Y 1 A THR 182 ? A THR 184 5 1 Y 1 A ALA 183 ? A ALA 185 6 1 Y 1 A ASP 184 ? A ASP 186 7 1 Y 1 B GLY -1 ? B GLY 1 8 1 Y 1 B SER 0 ? B SER 2 9 1 Y 1 B MET 1 ? B MET 3 10 1 Y 1 B SER 2 ? B SER 4 11 1 Y 1 B ALA 3 ? B ALA 5 12 1 Y 1 B GLU 110 ? B GLU 112 13 1 Y 1 B ALA 111 ? B ALA 113 14 1 Y 1 B ALA 112 ? B ALA 114 15 1 Y 1 B PRO 113 ? B PRO 115 16 1 Y 1 B GLU 114 ? B GLU 116 17 1 Y 1 B SER 115 ? B SER 117 18 1 Y 1 B GLN 116 ? B GLN 118 19 1 Y 1 B MET 117 ? B MET 119 20 1 Y 1 B MET 118 ? B MET 120 21 1 Y 1 B PRO 119 ? B PRO 121 22 1 Y 1 B ALA 120 ? B ALA 122 23 1 Y 1 B SER 121 ? B SER 123 24 1 Y 1 B VAL 122 ? B VAL 124 25 1 Y 1 B LEU 123 ? B LEU 125 26 1 Y 1 B THR 124 ? B THR 126 27 1 Y 1 B GLY 125 ? B GLY 127 28 1 Y 1 B ASN 126 ? B ASN 128 29 1 Y 1 B VAL 127 ? B VAL 129 30 1 Y 1 B ILE 128 ? B ILE 130 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GTP PG P N N 137 GTP O1G O N N 138 GTP O2G O N N 139 GTP O3G O N N 140 GTP O3B O N N 141 GTP PB P N N 142 GTP O1B O N N 143 GTP O2B O N N 144 GTP O3A O N N 145 GTP PA P N N 146 GTP O1A O N N 147 GTP O2A O N N 148 GTP "O5'" O N N 149 GTP "C5'" C N N 150 GTP "C4'" C N R 151 GTP "O4'" O N N 152 GTP "C3'" C N S 153 GTP "O3'" O N N 154 GTP "C2'" C N R 155 GTP "O2'" O N N 156 GTP "C1'" C N R 157 GTP N9 N Y N 158 GTP C8 C Y N 159 GTP N7 N Y N 160 GTP C5 C Y N 161 GTP C6 C N N 162 GTP O6 O N N 163 GTP N1 N N N 164 GTP C2 C N N 165 GTP N2 N N N 166 GTP N3 N N N 167 GTP C4 C Y N 168 GTP HOG2 H N N 169 GTP HOG3 H N N 170 GTP HOB2 H N N 171 GTP HOA2 H N N 172 GTP "H5'" H N N 173 GTP "H5''" H N N 174 GTP "H4'" H N N 175 GTP "H3'" H N N 176 GTP "HO3'" H N N 177 GTP "H2'" H N N 178 GTP "HO2'" H N N 179 GTP "H1'" H N N 180 GTP H8 H N N 181 GTP HN1 H N N 182 GTP HN21 H N N 183 GTP HN22 H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 HOH O O N N 206 HOH H1 H N N 207 HOH H2 H N N 208 ILE N N N N 209 ILE CA C N S 210 ILE C C N N 211 ILE O O N N 212 ILE CB C N S 213 ILE CG1 C N N 214 ILE CG2 C N N 215 ILE CD1 C N N 216 ILE OXT O N N 217 ILE H H N N 218 ILE H2 H N N 219 ILE HA H N N 220 ILE HB H N N 221 ILE HG12 H N N 222 ILE HG13 H N N 223 ILE HG21 H N N 224 ILE HG22 H N N 225 ILE HG23 H N N 226 ILE HD11 H N N 227 ILE HD12 H N N 228 ILE HD13 H N N 229 ILE HXT H N N 230 LEU N N N N 231 LEU CA C N S 232 LEU C C N N 233 LEU O O N N 234 LEU CB C N N 235 LEU CG C N N 236 LEU CD1 C N N 237 LEU CD2 C N N 238 LEU OXT O N N 239 LEU H H N N 240 LEU H2 H N N 241 LEU HA H N N 242 LEU HB2 H N N 243 LEU HB3 H N N 244 LEU HG H N N 245 LEU HD11 H N N 246 LEU HD12 H N N 247 LEU HD13 H N N 248 LEU HD21 H N N 249 LEU HD22 H N N 250 LEU HD23 H N N 251 LEU HXT H N N 252 LYS N N N N 253 LYS CA C N S 254 LYS C C N N 255 LYS O O N N 256 LYS CB C N N 257 LYS CG C N N 258 LYS CD C N N 259 LYS CE C N N 260 LYS NZ N N N 261 LYS OXT O N N 262 LYS H H N N 263 LYS H2 H N N 264 LYS HA H N N 265 LYS HB2 H N N 266 LYS HB3 H N N 267 LYS HG2 H N N 268 LYS HG3 H N N 269 LYS HD2 H N N 270 LYS HD3 H N N 271 LYS HE2 H N N 272 LYS HE3 H N N 273 LYS HZ1 H N N 274 LYS HZ2 H N N 275 LYS HZ3 H N N 276 LYS HXT H N N 277 MET N N N N 278 MET CA C N S 279 MET C C N N 280 MET O O N N 281 MET CB C N N 282 MET CG C N N 283 MET SD S N N 284 MET CE C N N 285 MET OXT O N N 286 MET H H N N 287 MET H2 H N N 288 MET HA H N N 289 MET HB2 H N N 290 MET HB3 H N N 291 MET HG2 H N N 292 MET HG3 H N N 293 MET HE1 H N N 294 MET HE2 H N N 295 MET HE3 H N N 296 MET HXT H N N 297 MG MG MG N N 298 PHE N N N N 299 PHE CA C N S 300 PHE C C N N 301 PHE O O N N 302 PHE CB C N N 303 PHE CG C Y N 304 PHE CD1 C Y N 305 PHE CD2 C Y N 306 PHE CE1 C Y N 307 PHE CE2 C Y N 308 PHE CZ C Y N 309 PHE OXT O N N 310 PHE H H N N 311 PHE H2 H N N 312 PHE HA H N N 313 PHE HB2 H N N 314 PHE HB3 H N N 315 PHE HD1 H N N 316 PHE HD2 H N N 317 PHE HE1 H N N 318 PHE HE2 H N N 319 PHE HZ H N N 320 PHE HXT H N N 321 PRO N N N N 322 PRO CA C N S 323 PRO C C N N 324 PRO O O N N 325 PRO CB C N N 326 PRO CG C N N 327 PRO CD C N N 328 PRO OXT O N N 329 PRO H H N N 330 PRO HA H N N 331 PRO HB2 H N N 332 PRO HB3 H N N 333 PRO HG2 H N N 334 PRO HG3 H N N 335 PRO HD2 H N N 336 PRO HD3 H N N 337 PRO HXT H N N 338 SER N N N N 339 SER CA C N S 340 SER C C N N 341 SER O O N N 342 SER CB C N N 343 SER OG O N N 344 SER OXT O N N 345 SER H H N N 346 SER H2 H N N 347 SER HA H N N 348 SER HB2 H N N 349 SER HB3 H N N 350 SER HG H N N 351 SER HXT H N N 352 THR N N N N 353 THR CA C N S 354 THR C C N N 355 THR O O N N 356 THR CB C N R 357 THR OG1 O N N 358 THR CG2 C N N 359 THR OXT O N N 360 THR H H N N 361 THR H2 H N N 362 THR HA H N N 363 THR HB H N N 364 THR HG1 H N N 365 THR HG21 H N N 366 THR HG22 H N N 367 THR HG23 H N N 368 THR HXT H N N 369 TRP N N N N 370 TRP CA C N S 371 TRP C C N N 372 TRP O O N N 373 TRP CB C N N 374 TRP CG C Y N 375 TRP CD1 C Y N 376 TRP CD2 C Y N 377 TRP NE1 N Y N 378 TRP CE2 C Y N 379 TRP CE3 C Y N 380 TRP CZ2 C Y N 381 TRP CZ3 C Y N 382 TRP CH2 C Y N 383 TRP OXT O N N 384 TRP H H N N 385 TRP H2 H N N 386 TRP HA H N N 387 TRP HB2 H N N 388 TRP HB3 H N N 389 TRP HD1 H N N 390 TRP HE1 H N N 391 TRP HE3 H N N 392 TRP HZ2 H N N 393 TRP HZ3 H N N 394 TRP HH2 H N N 395 TRP HXT H N N 396 TYR N N N N 397 TYR CA C N S 398 TYR C C N N 399 TYR O O N N 400 TYR CB C N N 401 TYR CG C Y N 402 TYR CD1 C Y N 403 TYR CD2 C Y N 404 TYR CE1 C Y N 405 TYR CE2 C Y N 406 TYR CZ C Y N 407 TYR OH O N N 408 TYR OXT O N N 409 TYR H H N N 410 TYR H2 H N N 411 TYR HA H N N 412 TYR HB2 H N N 413 TYR HB3 H N N 414 TYR HD1 H N N 415 TYR HD2 H N N 416 TYR HE1 H N N 417 TYR HE2 H N N 418 TYR HH H N N 419 TYR HXT H N N 420 VAL N N N N 421 VAL CA C N S 422 VAL C C N N 423 VAL O O N N 424 VAL CB C N N 425 VAL CG1 C N N 426 VAL CG2 C N N 427 VAL OXT O N N 428 VAL H H N N 429 VAL H2 H N N 430 VAL HA H N N 431 VAL HB H N N 432 VAL HG11 H N N 433 VAL HG12 H N N 434 VAL HG13 H N N 435 VAL HG21 H N N 436 VAL HG22 H N N 437 VAL HG23 H N N 438 VAL HXT H N N 439 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GTP PG O1G doub N N 129 GTP PG O2G sing N N 130 GTP PG O3G sing N N 131 GTP PG O3B sing N N 132 GTP O2G HOG2 sing N N 133 GTP O3G HOG3 sing N N 134 GTP O3B PB sing N N 135 GTP PB O1B doub N N 136 GTP PB O2B sing N N 137 GTP PB O3A sing N N 138 GTP O2B HOB2 sing N N 139 GTP O3A PA sing N N 140 GTP PA O1A doub N N 141 GTP PA O2A sing N N 142 GTP PA "O5'" sing N N 143 GTP O2A HOA2 sing N N 144 GTP "O5'" "C5'" sing N N 145 GTP "C5'" "C4'" sing N N 146 GTP "C5'" "H5'" sing N N 147 GTP "C5'" "H5''" sing N N 148 GTP "C4'" "O4'" sing N N 149 GTP "C4'" "C3'" sing N N 150 GTP "C4'" "H4'" sing N N 151 GTP "O4'" "C1'" sing N N 152 GTP "C3'" "O3'" sing N N 153 GTP "C3'" "C2'" sing N N 154 GTP "C3'" "H3'" sing N N 155 GTP "O3'" "HO3'" sing N N 156 GTP "C2'" "O2'" sing N N 157 GTP "C2'" "C1'" sing N N 158 GTP "C2'" "H2'" sing N N 159 GTP "O2'" "HO2'" sing N N 160 GTP "C1'" N9 sing N N 161 GTP "C1'" "H1'" sing N N 162 GTP N9 C8 sing Y N 163 GTP N9 C4 sing Y N 164 GTP C8 N7 doub Y N 165 GTP C8 H8 sing N N 166 GTP N7 C5 sing Y N 167 GTP C5 C6 sing N N 168 GTP C5 C4 doub Y N 169 GTP C6 O6 doub N N 170 GTP C6 N1 sing N N 171 GTP N1 C2 sing N N 172 GTP N1 HN1 sing N N 173 GTP C2 N2 sing N N 174 GTP C2 N3 doub N N 175 GTP N2 HN21 sing N N 176 GTP N2 HN22 sing N N 177 GTP N3 C4 sing N N 178 HIS N CA sing N N 179 HIS N H sing N N 180 HIS N H2 sing N N 181 HIS CA C sing N N 182 HIS CA CB sing N N 183 HIS CA HA sing N N 184 HIS C O doub N N 185 HIS C OXT sing N N 186 HIS CB CG sing N N 187 HIS CB HB2 sing N N 188 HIS CB HB3 sing N N 189 HIS CG ND1 sing Y N 190 HIS CG CD2 doub Y N 191 HIS ND1 CE1 doub Y N 192 HIS ND1 HD1 sing N N 193 HIS CD2 NE2 sing Y N 194 HIS CD2 HD2 sing N N 195 HIS CE1 NE2 sing Y N 196 HIS CE1 HE1 sing N N 197 HIS NE2 HE2 sing N N 198 HIS OXT HXT sing N N 199 HOH O H1 sing N N 200 HOH O H2 sing N N 201 ILE N CA sing N N 202 ILE N H sing N N 203 ILE N H2 sing N N 204 ILE CA C sing N N 205 ILE CA CB sing N N 206 ILE CA HA sing N N 207 ILE C O doub N N 208 ILE C OXT sing N N 209 ILE CB CG1 sing N N 210 ILE CB CG2 sing N N 211 ILE CB HB sing N N 212 ILE CG1 CD1 sing N N 213 ILE CG1 HG12 sing N N 214 ILE CG1 HG13 sing N N 215 ILE CG2 HG21 sing N N 216 ILE CG2 HG22 sing N N 217 ILE CG2 HG23 sing N N 218 ILE CD1 HD11 sing N N 219 ILE CD1 HD12 sing N N 220 ILE CD1 HD13 sing N N 221 ILE OXT HXT sing N N 222 LEU N CA sing N N 223 LEU N H sing N N 224 LEU N H2 sing N N 225 LEU CA C sing N N 226 LEU CA CB sing N N 227 LEU CA HA sing N N 228 LEU C O doub N N 229 LEU C OXT sing N N 230 LEU CB CG sing N N 231 LEU CB HB2 sing N N 232 LEU CB HB3 sing N N 233 LEU CG CD1 sing N N 234 LEU CG CD2 sing N N 235 LEU CG HG sing N N 236 LEU CD1 HD11 sing N N 237 LEU CD1 HD12 sing N N 238 LEU CD1 HD13 sing N N 239 LEU CD2 HD21 sing N N 240 LEU CD2 HD22 sing N N 241 LEU CD2 HD23 sing N N 242 LEU OXT HXT sing N N 243 LYS N CA sing N N 244 LYS N H sing N N 245 LYS N H2 sing N N 246 LYS CA C sing N N 247 LYS CA CB sing N N 248 LYS CA HA sing N N 249 LYS C O doub N N 250 LYS C OXT sing N N 251 LYS CB CG sing N N 252 LYS CB HB2 sing N N 253 LYS CB HB3 sing N N 254 LYS CG CD sing N N 255 LYS CG HG2 sing N N 256 LYS CG HG3 sing N N 257 LYS CD CE sing N N 258 LYS CD HD2 sing N N 259 LYS CD HD3 sing N N 260 LYS CE NZ sing N N 261 LYS CE HE2 sing N N 262 LYS CE HE3 sing N N 263 LYS NZ HZ1 sing N N 264 LYS NZ HZ2 sing N N 265 LYS NZ HZ3 sing N N 266 LYS OXT HXT sing N N 267 MET N CA sing N N 268 MET N H sing N N 269 MET N H2 sing N N 270 MET CA C sing N N 271 MET CA CB sing N N 272 MET CA HA sing N N 273 MET C O doub N N 274 MET C OXT sing N N 275 MET CB CG sing N N 276 MET CB HB2 sing N N 277 MET CB HB3 sing N N 278 MET CG SD sing N N 279 MET CG HG2 sing N N 280 MET CG HG3 sing N N 281 MET SD CE sing N N 282 MET CE HE1 sing N N 283 MET CE HE2 sing N N 284 MET CE HE3 sing N N 285 MET OXT HXT sing N N 286 PHE N CA sing N N 287 PHE N H sing N N 288 PHE N H2 sing N N 289 PHE CA C sing N N 290 PHE CA CB sing N N 291 PHE CA HA sing N N 292 PHE C O doub N N 293 PHE C OXT sing N N 294 PHE CB CG sing N N 295 PHE CB HB2 sing N N 296 PHE CB HB3 sing N N 297 PHE CG CD1 doub Y N 298 PHE CG CD2 sing Y N 299 PHE CD1 CE1 sing Y N 300 PHE CD1 HD1 sing N N 301 PHE CD2 CE2 doub Y N 302 PHE CD2 HD2 sing N N 303 PHE CE1 CZ doub Y N 304 PHE CE1 HE1 sing N N 305 PHE CE2 CZ sing Y N 306 PHE CE2 HE2 sing N N 307 PHE CZ HZ sing N N 308 PHE OXT HXT sing N N 309 PRO N CA sing N N 310 PRO N CD sing N N 311 PRO N H sing N N 312 PRO CA C sing N N 313 PRO CA CB sing N N 314 PRO CA HA sing N N 315 PRO C O doub N N 316 PRO C OXT sing N N 317 PRO CB CG sing N N 318 PRO CB HB2 sing N N 319 PRO CB HB3 sing N N 320 PRO CG CD sing N N 321 PRO CG HG2 sing N N 322 PRO CG HG3 sing N N 323 PRO CD HD2 sing N N 324 PRO CD HD3 sing N N 325 PRO OXT HXT sing N N 326 SER N CA sing N N 327 SER N H sing N N 328 SER N H2 sing N N 329 SER CA C sing N N 330 SER CA CB sing N N 331 SER CA HA sing N N 332 SER C O doub N N 333 SER C OXT sing N N 334 SER CB OG sing N N 335 SER CB HB2 sing N N 336 SER CB HB3 sing N N 337 SER OG HG sing N N 338 SER OXT HXT sing N N 339 THR N CA sing N N 340 THR N H sing N N 341 THR N H2 sing N N 342 THR CA C sing N N 343 THR CA CB sing N N 344 THR CA HA sing N N 345 THR C O doub N N 346 THR C OXT sing N N 347 THR CB OG1 sing N N 348 THR CB CG2 sing N N 349 THR CB HB sing N N 350 THR OG1 HG1 sing N N 351 THR CG2 HG21 sing N N 352 THR CG2 HG22 sing N N 353 THR CG2 HG23 sing N N 354 THR OXT HXT sing N N 355 TRP N CA sing N N 356 TRP N H sing N N 357 TRP N H2 sing N N 358 TRP CA C sing N N 359 TRP CA CB sing N N 360 TRP CA HA sing N N 361 TRP C O doub N N 362 TRP C OXT sing N N 363 TRP CB CG sing N N 364 TRP CB HB2 sing N N 365 TRP CB HB3 sing N N 366 TRP CG CD1 doub Y N 367 TRP CG CD2 sing Y N 368 TRP CD1 NE1 sing Y N 369 TRP CD1 HD1 sing N N 370 TRP CD2 CE2 doub Y N 371 TRP CD2 CE3 sing Y N 372 TRP NE1 CE2 sing Y N 373 TRP NE1 HE1 sing N N 374 TRP CE2 CZ2 sing Y N 375 TRP CE3 CZ3 doub Y N 376 TRP CE3 HE3 sing N N 377 TRP CZ2 CH2 doub Y N 378 TRP CZ2 HZ2 sing N N 379 TRP CZ3 CH2 sing Y N 380 TRP CZ3 HZ3 sing N N 381 TRP CH2 HH2 sing N N 382 TRP OXT HXT sing N N 383 TYR N CA sing N N 384 TYR N H sing N N 385 TYR N H2 sing N N 386 TYR CA C sing N N 387 TYR CA CB sing N N 388 TYR CA HA sing N N 389 TYR C O doub N N 390 TYR C OXT sing N N 391 TYR CB CG sing N N 392 TYR CB HB2 sing N N 393 TYR CB HB3 sing N N 394 TYR CG CD1 doub Y N 395 TYR CG CD2 sing Y N 396 TYR CD1 CE1 sing Y N 397 TYR CD1 HD1 sing N N 398 TYR CD2 CE2 doub Y N 399 TYR CD2 HD2 sing N N 400 TYR CE1 CZ doub Y N 401 TYR CE1 HE1 sing N N 402 TYR CE2 CZ sing Y N 403 TYR CE2 HE2 sing N N 404 TYR CZ OH sing N N 405 TYR OH HH sing N N 406 TYR OXT HXT sing N N 407 VAL N CA sing N N 408 VAL N H sing N N 409 VAL N H2 sing N N 410 VAL CA C sing N N 411 VAL CA CB sing N N 412 VAL CA HA sing N N 413 VAL C O doub N N 414 VAL C OXT sing N N 415 VAL CB CG1 sing N N 416 VAL CB CG2 sing N N 417 VAL CB HB sing N N 418 VAL CG1 HG11 sing N N 419 VAL CG1 HG12 sing N N 420 VAL CG1 HG13 sing N N 421 VAL CG2 HG21 sing N N 422 VAL CG2 HG22 sing N N 423 VAL CG2 HG23 sing N N 424 VAL OXT HXT sing N N 425 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 "GUANOSINE-5'-TRIPHOSPHATE" GTP 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1FZQ _pdbx_initial_refinement_model.details 'ARL3-GDP, pdb entry 1fzq' #