data_1KYJ # _entry.id 1KYJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1KYJ RCSB RCSB015470 WWPDB D_1000015470 # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.pdb_id 1KYJ _pdbx_database_PDB_obs_spr.replace_pdb_id 1SIA _pdbx_database_PDB_obs_spr.date 2002-02-20 _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.db_id 16963 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1KYJ _pdbx_database_status.recvd_initial_deposition_date 2002-02-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Coltart, D.M.' 1 'Williams, L.J.' 2 'Glunz, P.W.' 3 'Sames, D.' 4 'Kuduk, S.D.' 5 'Schwarz, J.B.' 6 'Chen, X.-T.' 7 'Royyuru, A.K.' 8 'Danishefsky, S.D.' 9 'Live, D.H.' 10 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Principles of Mucin Architecture: Structural Studies on Synthetic Glycopeptides Bearing Clustered Mono-, Di-, Tri-, and Hexasaccharide Glycodomains ; J.Am.Chem.Soc. 124 9833 9844 2002 JACSAT US 0002-7863 0004 ? 12175243 10.1021/ja020208f 1 'Probing Cell-Surface Architecture Through Synthesis: An NMR Determined Structural Motif for Tumor-Associated Mucins' Proc.Natl.Acad.Sci.USA 96 3489 3493 1999 PNASA6 US 0027-8424 0040 ? ? 10.1073/pnas.96.7.3489 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Coltart, D.M.' 1 ? primary 'Royyuru, A.K.' 2 ? primary 'Williams, L.J.' 3 ? primary 'Glunz, P.W.' 4 ? primary 'Sames, D.' 5 ? primary 'Kuduk, S.D.' 6 ? primary 'Schwarz, J.B.' 7 ? primary 'Chen, X.T.' 8 ? primary 'Danishefsky, S.J.' 9 ? primary 'Live, D.H.' 10 ? 1 'Live, D.H.' 11 ? 1 'Williams, L.J.' 12 ? 1 'Kuduk, S.D.' 13 ? 1 'Schwarz, J.B.' 14 ? 1 'Glunz, P.W.' 15 ? 1 'Chen, X.-T.' 16 ? 1 'Sames, D.' 17 ? 1 'Kumar, R.A.' 18 ? 1 'Danishefsky, S.J.' 19 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Leukosialin (CD43) fragment' 503.547 1 ? ? 'N-terminal glycopentapeptide' 'Ser A 1, Thr A 2, Thr A 3 modified with glycosylation by STF antigen' 2 non-polymer syn 2-acetamido-2-deoxy-alpha-D-galactopyranose 221.208 3 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'pentapeptide fragment of sialophorin' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ACE)STTAV' _entity_poly.pdbx_seq_one_letter_code_can XSTTAV _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 SER n 1 3 THR n 1 4 THR n 1 5 ALA n 1 6 VAL n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Fragment of human sequence' # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1KYJ _struct_ref.pdbx_db_accession 1KYJ _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1KYJ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 6 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1KYJ _struct_ref_seq.db_align_beg 0 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 5 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 0 _struct_ref_seq.pdbx_auth_seq_align_end 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A2G 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-galactopyranose ? 'C8 H15 N O6' 221.208 ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 '2D NOESY' 2 1 1 3D_TOCSY_NOESY # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 291 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 4.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '10 mM glycopeptide' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.field_strength 1 ? Varian INOVA 600 2 ? Varian INOVA 800 # _pdbx_nmr_refine.entry_id 1KYJ _pdbx_nmr_refine.method 'VNMR, NMRPIPE, X-PLOR, Torsion Space Simulated Annealing' _pdbx_nmr_refine.details ;refinement based on 107 NOE's 11 J coupling restraints and 3 dihedral restraints. See citation for full description. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1KYJ _pdbx_nmr_details.text ;Coordinates are given only for the experimentally defined glycopeptide core residues. These are comprised of the amino acid units in the peptide and the N-acetyl-galactosamine. Coordinates for the terminal galactose and sialic acid of each of the glycans are not included. ; # _pdbx_nmr_ensemble.entry_id 1KYJ _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 59 _pdbx_nmr_ensemble.conformer_selection_criteria ;No NOE violations greter than 0.15A, no coupling violation greater than 0.5 Hz, no angle violation greater than 5 deg. ; _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1KYJ _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal VNMR 6.1 collection 'Varian Inc.' 1 VNMR 6.1 'data analysis' 'Varian Inc.' 2 NMRPipe 2.1 'data analysis' Delaglio 3 X-PLOR 98 refinement Brunger/MSI 4 # _exptl.entry_id 1KYJ _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1KYJ _struct.title 'Tumor Associated Mucin Motif from CD43 protein' _struct.pdbx_descriptor 'Leukosialin (CD43) fragment' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1KYJ _struct_keywords.pdbx_keywords 'glycoprotein, immune system' _struct_keywords.text 'Leukosialin, CD43, Mucin glycoprotein, glycoprotein, immune system' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ACE 1 C ? ? ? 1_555 A SER 2 N ? ? A ACE 0 A SER 1 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale2 covale one ? A SER 2 OG ? ? ? 1_555 B A2G . C1 ? ? A SER 1 A A2G 7 1_555 ? ? ? ? ? ? ? 1.410 ? O-Glycosylation covale3 covale one ? A THR 3 OG1 ? ? ? 1_555 C A2G . C1 ? ? A THR 2 A A2G 10 1_555 ? ? ? ? ? ? ? 1.418 ? O-Glycosylation covale4 covale one ? A THR 4 OG1 ? ? ? 1_555 D A2G . C1 ? ? A THR 3 A A2G 13 1_555 ? ? ? ? ? ? ? 1.420 ? O-Glycosylation # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1KYJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1KYJ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 0 0 ACE ACE A . n A 1 2 SER 2 1 1 SER SER A . n A 1 3 THR 3 2 2 THR THR A . n A 1 4 THR 4 3 3 THR THR A . n A 1 5 ALA 5 4 4 ALA ALA A . n A 1 6 VAL 6 5 5 VAL VAL A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A2G 1 7 7 A2G A2G A . C 2 A2G 1 10 10 A2G A2G A . D 2 A2G 1 13 13 A2G A2G A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A SER 2 A SER 1 ? SER 'GLYCOSYLATION SITE' 2 A THR 3 A THR 2 ? THR 'GLYCOSYLATION SITE' 3 A THR 4 A THR 3 ? THR 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-02-20 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' entity 4 4 'Structure model' pdbx_chem_comp_identifier 5 4 'Structure model' pdbx_entity_nonpoly 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site 8 4 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.auth_atom_id' 2 4 'Structure model' '_atom_site.label_atom_id' 3 4 'Structure model' '_chem_comp.name' 4 4 'Structure model' '_chem_comp.type' 5 4 'Structure model' '_entity.pdbx_description' 6 4 'Structure model' '_pdbx_entity_nonpoly.name' 7 4 'Structure model' '_struct_conn.pdbx_dist_value' 8 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 9 4 'Structure model' '_struct_conn.pdbx_role' 10 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 11 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 14 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 15 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 16 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 19 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 20 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 4 ? ? -84.99 -142.57 2 4 ALA A 4 ? ? -85.30 -143.55 3 6 ALA A 4 ? ? -84.99 -143.59 4 11 ALA A 4 ? ? -153.51 -147.73 5 14 ALA A 4 ? ? -84.74 -142.22 6 15 ALA A 4 ? ? -85.09 -142.39 7 16 ALA A 4 ? ? -152.37 -149.20 8 17 ALA A 4 ? ? -84.84 -142.15 9 18 ALA A 4 ? ? -84.96 -143.21 10 19 ALA A 4 ? ? -154.78 -146.26 11 22 ALA A 4 ? ? -84.77 -143.49 12 23 ALA A 4 ? ? -153.67 -148.45 13 25 THR A 2 ? ? -95.49 -159.50 14 25 ALA A 4 ? ? -84.77 -143.59 15 27 THR A 2 ? ? -94.80 -156.12 16 27 ALA A 4 ? ? -84.68 -143.88 17 28 ALA A 4 ? ? -85.20 -142.04 18 31 ALA A 4 ? ? -85.04 -142.65 19 34 ALA A 4 ? ? -154.62 -145.77 20 35 THR A 2 ? ? -95.96 -155.09 21 37 THR A 2 ? ? -96.65 -153.06 22 38 ALA A 4 ? ? -84.76 -143.00 23 39 THR A 2 ? ? -94.96 -158.67 24 39 ALA A 4 ? ? -84.75 -143.31 25 40 THR A 2 ? ? -95.59 -155.40 26 42 THR A 2 ? ? -94.70 -157.10 27 42 ALA A 4 ? ? -85.03 -141.80 28 43 ALA A 4 ? ? -153.85 -147.59 29 44 THR A 2 ? ? -96.14 -158.31 30 44 ALA A 4 ? ? -84.85 -143.97 31 45 ALA A 4 ? ? -85.30 -143.59 32 47 ALA A 4 ? ? -84.47 -142.07 33 49 ALA A 4 ? ? -84.59 -143.26 34 50 ALA A 4 ? ? -84.82 -144.03 35 52 ALA A 4 ? ? -85.08 -142.46 36 53 ALA A 4 ? ? -154.30 -145.81 37 54 THR A 2 ? ? -96.69 -158.78 38 55 ALA A 4 ? ? -85.01 -144.04 39 56 THR A 2 ? ? -97.36 -156.78 40 57 THR A 2 ? ? -98.42 -156.69 41 57 ALA A 4 ? ? -85.19 -142.72 42 58 ALA A 4 ? ? -154.35 -146.12 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A A2G 7 ? O6 ? B A2G 1 O6 2 1 N 1 A A2G 10 ? O6 ? C A2G 1 O6 3 1 N 1 A A2G 13 ? O6 ? D A2G 1 O6 4 2 N 1 A A2G 7 ? O6 ? B A2G 1 O6 5 2 N 1 A A2G 10 ? O6 ? C A2G 1 O6 6 2 N 1 A A2G 13 ? O6 ? D A2G 1 O6 7 3 N 1 A A2G 7 ? O6 ? B A2G 1 O6 8 3 N 1 A A2G 10 ? O6 ? C A2G 1 O6 9 3 N 1 A A2G 13 ? O6 ? D A2G 1 O6 10 4 N 1 A A2G 7 ? O6 ? B A2G 1 O6 11 4 N 1 A A2G 10 ? O6 ? C A2G 1 O6 12 4 N 1 A A2G 13 ? O6 ? D A2G 1 O6 13 5 N 1 A A2G 7 ? O6 ? B A2G 1 O6 14 5 N 1 A A2G 10 ? O6 ? C A2G 1 O6 15 5 N 1 A A2G 13 ? O6 ? D A2G 1 O6 16 6 N 1 A A2G 7 ? O6 ? B A2G 1 O6 17 6 N 1 A A2G 10 ? O6 ? C A2G 1 O6 18 6 N 1 A A2G 13 ? O6 ? D A2G 1 O6 19 7 N 1 A A2G 7 ? O6 ? B A2G 1 O6 20 7 N 1 A A2G 10 ? O6 ? C A2G 1 O6 21 7 N 1 A A2G 13 ? O6 ? D A2G 1 O6 22 8 N 1 A A2G 7 ? O6 ? B A2G 1 O6 23 8 N 1 A A2G 10 ? O6 ? C A2G 1 O6 24 8 N 1 A A2G 13 ? O6 ? D A2G 1 O6 25 9 N 1 A A2G 7 ? O6 ? B A2G 1 O6 26 9 N 1 A A2G 10 ? O6 ? C A2G 1 O6 27 9 N 1 A A2G 13 ? O6 ? D A2G 1 O6 28 10 N 1 A A2G 7 ? O6 ? B A2G 1 O6 29 10 N 1 A A2G 10 ? O6 ? C A2G 1 O6 30 10 N 1 A A2G 13 ? O6 ? D A2G 1 O6 31 11 N 1 A A2G 7 ? O6 ? B A2G 1 O6 32 11 N 1 A A2G 10 ? O6 ? C A2G 1 O6 33 11 N 1 A A2G 13 ? O6 ? D A2G 1 O6 34 12 N 1 A A2G 7 ? O6 ? B A2G 1 O6 35 12 N 1 A A2G 10 ? O6 ? C A2G 1 O6 36 12 N 1 A A2G 13 ? O6 ? D A2G 1 O6 37 13 N 1 A A2G 7 ? O6 ? B A2G 1 O6 38 13 N 1 A A2G 10 ? O6 ? C A2G 1 O6 39 13 N 1 A A2G 13 ? O6 ? D A2G 1 O6 40 14 N 1 A A2G 7 ? O6 ? B A2G 1 O6 41 14 N 1 A A2G 10 ? O6 ? C A2G 1 O6 42 14 N 1 A A2G 13 ? O6 ? D A2G 1 O6 43 15 N 1 A A2G 7 ? O6 ? B A2G 1 O6 44 15 N 1 A A2G 10 ? O6 ? C A2G 1 O6 45 15 N 1 A A2G 13 ? O6 ? D A2G 1 O6 46 16 N 1 A A2G 7 ? O6 ? B A2G 1 O6 47 16 N 1 A A2G 10 ? O6 ? C A2G 1 O6 48 16 N 1 A A2G 13 ? O6 ? D A2G 1 O6 49 17 N 1 A A2G 7 ? O6 ? B A2G 1 O6 50 17 N 1 A A2G 10 ? O6 ? C A2G 1 O6 51 17 N 1 A A2G 13 ? O6 ? D A2G 1 O6 52 18 N 1 A A2G 7 ? O6 ? B A2G 1 O6 53 18 N 1 A A2G 10 ? O6 ? C A2G 1 O6 54 18 N 1 A A2G 13 ? O6 ? D A2G 1 O6 55 19 N 1 A A2G 7 ? O6 ? B A2G 1 O6 56 19 N 1 A A2G 10 ? O6 ? C A2G 1 O6 57 19 N 1 A A2G 13 ? O6 ? D A2G 1 O6 58 20 N 1 A A2G 7 ? O6 ? B A2G 1 O6 59 20 N 1 A A2G 10 ? O6 ? C A2G 1 O6 60 20 N 1 A A2G 13 ? O6 ? D A2G 1 O6 61 21 N 1 A A2G 7 ? O6 ? B A2G 1 O6 62 21 N 1 A A2G 10 ? O6 ? C A2G 1 O6 63 21 N 1 A A2G 13 ? O6 ? D A2G 1 O6 64 22 N 1 A A2G 7 ? O6 ? B A2G 1 O6 65 22 N 1 A A2G 10 ? O6 ? C A2G 1 O6 66 22 N 1 A A2G 13 ? O6 ? D A2G 1 O6 67 23 N 1 A A2G 7 ? O6 ? B A2G 1 O6 68 23 N 1 A A2G 10 ? O6 ? C A2G 1 O6 69 23 N 1 A A2G 13 ? O6 ? D A2G 1 O6 70 24 N 1 A A2G 7 ? O6 ? B A2G 1 O6 71 24 N 1 A A2G 10 ? O6 ? C A2G 1 O6 72 24 N 1 A A2G 13 ? O6 ? D A2G 1 O6 73 25 N 1 A A2G 7 ? O6 ? B A2G 1 O6 74 25 N 1 A A2G 10 ? O6 ? C A2G 1 O6 75 25 N 1 A A2G 13 ? O6 ? D A2G 1 O6 76 26 N 1 A A2G 7 ? O6 ? B A2G 1 O6 77 26 N 1 A A2G 10 ? O6 ? C A2G 1 O6 78 26 N 1 A A2G 13 ? O6 ? D A2G 1 O6 79 27 N 1 A A2G 7 ? O6 ? B A2G 1 O6 80 27 N 1 A A2G 10 ? O6 ? C A2G 1 O6 81 27 N 1 A A2G 13 ? O6 ? D A2G 1 O6 82 28 N 1 A A2G 7 ? O6 ? B A2G 1 O6 83 28 N 1 A A2G 10 ? O6 ? C A2G 1 O6 84 28 N 1 A A2G 13 ? O6 ? D A2G 1 O6 85 29 N 1 A A2G 7 ? O6 ? B A2G 1 O6 86 29 N 1 A A2G 10 ? O6 ? C A2G 1 O6 87 29 N 1 A A2G 13 ? O6 ? D A2G 1 O6 88 30 N 1 A A2G 7 ? O6 ? B A2G 1 O6 89 30 N 1 A A2G 10 ? O6 ? C A2G 1 O6 90 30 N 1 A A2G 13 ? O6 ? D A2G 1 O6 91 31 N 1 A A2G 7 ? O6 ? B A2G 1 O6 92 31 N 1 A A2G 10 ? O6 ? C A2G 1 O6 93 31 N 1 A A2G 13 ? O6 ? D A2G 1 O6 94 32 N 1 A A2G 7 ? O6 ? B A2G 1 O6 95 32 N 1 A A2G 10 ? O6 ? C A2G 1 O6 96 32 N 1 A A2G 13 ? O6 ? D A2G 1 O6 97 33 N 1 A A2G 7 ? O6 ? B A2G 1 O6 98 33 N 1 A A2G 10 ? O6 ? C A2G 1 O6 99 33 N 1 A A2G 13 ? O6 ? D A2G 1 O6 100 34 N 1 A A2G 7 ? O6 ? B A2G 1 O6 101 34 N 1 A A2G 10 ? O6 ? C A2G 1 O6 102 34 N 1 A A2G 13 ? O6 ? D A2G 1 O6 103 35 N 1 A A2G 7 ? O6 ? B A2G 1 O6 104 35 N 1 A A2G 10 ? O6 ? C A2G 1 O6 105 35 N 1 A A2G 13 ? O6 ? D A2G 1 O6 106 36 N 1 A A2G 7 ? O6 ? B A2G 1 O6 107 36 N 1 A A2G 10 ? O6 ? C A2G 1 O6 108 36 N 1 A A2G 13 ? O6 ? D A2G 1 O6 109 37 N 1 A A2G 7 ? O6 ? B A2G 1 O6 110 37 N 1 A A2G 10 ? O6 ? C A2G 1 O6 111 37 N 1 A A2G 13 ? O6 ? D A2G 1 O6 112 38 N 1 A A2G 7 ? O6 ? B A2G 1 O6 113 38 N 1 A A2G 10 ? O6 ? C A2G 1 O6 114 38 N 1 A A2G 13 ? O6 ? D A2G 1 O6 115 39 N 1 A A2G 7 ? O6 ? B A2G 1 O6 116 39 N 1 A A2G 10 ? O6 ? C A2G 1 O6 117 39 N 1 A A2G 13 ? O6 ? D A2G 1 O6 118 40 N 1 A A2G 7 ? O6 ? B A2G 1 O6 119 40 N 1 A A2G 10 ? O6 ? C A2G 1 O6 120 40 N 1 A A2G 13 ? O6 ? D A2G 1 O6 121 41 N 1 A A2G 7 ? O6 ? B A2G 1 O6 122 41 N 1 A A2G 10 ? O6 ? C A2G 1 O6 123 41 N 1 A A2G 13 ? O6 ? D A2G 1 O6 124 42 N 1 A A2G 7 ? O6 ? B A2G 1 O6 125 42 N 1 A A2G 10 ? O6 ? C A2G 1 O6 126 42 N 1 A A2G 13 ? O6 ? D A2G 1 O6 127 43 N 1 A A2G 7 ? O6 ? B A2G 1 O6 128 43 N 1 A A2G 10 ? O6 ? C A2G 1 O6 129 43 N 1 A A2G 13 ? O6 ? D A2G 1 O6 130 44 N 1 A A2G 7 ? O6 ? B A2G 1 O6 131 44 N 1 A A2G 10 ? O6 ? C A2G 1 O6 132 44 N 1 A A2G 13 ? O6 ? D A2G 1 O6 133 45 N 1 A A2G 7 ? O6 ? B A2G 1 O6 134 45 N 1 A A2G 10 ? O6 ? C A2G 1 O6 135 45 N 1 A A2G 13 ? O6 ? D A2G 1 O6 136 46 N 1 A A2G 7 ? O6 ? B A2G 1 O6 137 46 N 1 A A2G 10 ? O6 ? C A2G 1 O6 138 46 N 1 A A2G 13 ? O6 ? D A2G 1 O6 139 47 N 1 A A2G 7 ? O6 ? B A2G 1 O6 140 47 N 1 A A2G 10 ? O6 ? C A2G 1 O6 141 47 N 1 A A2G 13 ? O6 ? D A2G 1 O6 142 48 N 1 A A2G 7 ? O6 ? B A2G 1 O6 143 48 N 1 A A2G 10 ? O6 ? C A2G 1 O6 144 48 N 1 A A2G 13 ? O6 ? D A2G 1 O6 145 49 N 1 A A2G 7 ? O6 ? B A2G 1 O6 146 49 N 1 A A2G 10 ? O6 ? C A2G 1 O6 147 49 N 1 A A2G 13 ? O6 ? D A2G 1 O6 148 50 N 1 A A2G 7 ? O6 ? B A2G 1 O6 149 50 N 1 A A2G 10 ? O6 ? C A2G 1 O6 150 50 N 1 A A2G 13 ? O6 ? D A2G 1 O6 151 51 N 1 A A2G 7 ? O6 ? B A2G 1 O6 152 51 N 1 A A2G 10 ? O6 ? C A2G 1 O6 153 51 N 1 A A2G 13 ? O6 ? D A2G 1 O6 154 52 N 1 A A2G 7 ? O6 ? B A2G 1 O6 155 52 N 1 A A2G 10 ? O6 ? C A2G 1 O6 156 52 N 1 A A2G 13 ? O6 ? D A2G 1 O6 157 53 N 1 A A2G 7 ? O6 ? B A2G 1 O6 158 53 N 1 A A2G 10 ? O6 ? C A2G 1 O6 159 53 N 1 A A2G 13 ? O6 ? D A2G 1 O6 160 54 N 1 A A2G 7 ? O6 ? B A2G 1 O6 161 54 N 1 A A2G 10 ? O6 ? C A2G 1 O6 162 54 N 1 A A2G 13 ? O6 ? D A2G 1 O6 163 55 N 1 A A2G 7 ? O6 ? B A2G 1 O6 164 55 N 1 A A2G 10 ? O6 ? C A2G 1 O6 165 55 N 1 A A2G 13 ? O6 ? D A2G 1 O6 166 56 N 1 A A2G 7 ? O6 ? B A2G 1 O6 167 56 N 1 A A2G 10 ? O6 ? C A2G 1 O6 168 56 N 1 A A2G 13 ? O6 ? D A2G 1 O6 169 57 N 1 A A2G 7 ? O6 ? B A2G 1 O6 170 57 N 1 A A2G 10 ? O6 ? C A2G 1 O6 171 57 N 1 A A2G 13 ? O6 ? D A2G 1 O6 172 58 N 1 A A2G 7 ? O6 ? B A2G 1 O6 173 58 N 1 A A2G 10 ? O6 ? C A2G 1 O6 174 58 N 1 A A2G 13 ? O6 ? D A2G 1 O6 175 59 N 1 A A2G 7 ? O6 ? B A2G 1 O6 176 59 N 1 A A2G 10 ? O6 ? C A2G 1 O6 177 59 N 1 A A2G 13 ? O6 ? D A2G 1 O6 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A2G 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpNAca A2G 'COMMON NAME' GMML 1.0 N-acetyl-a-D-galactopyranosamine A2G 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GalpNAc A2G 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GalNAc # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-alpha-D-galactopyranose _pdbx_entity_nonpoly.comp_id A2G #