HEADER SIGNALING PROTEIN 06-FEB-02 1KZG TITLE DBSCDC42(Y889F) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GUANINE NUCLEOTIDE EXCHANGE FACTOR DBS; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: DH/PH FRAGMENT (RESIDUES 623-967); COMPND 5 SYNONYM: DBL'S BIG SISTER, DBS; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: CDC42 HOMOLOG; COMPND 10 CHAIN: B, D; COMPND 11 FRAGMENT: RESIDUES 1-188; COMPND 12 SYNONYM: G25K GTP-BINDING PROTEIN; COMPND 13 ENGINEERED: YES; COMPND 14 MUTATION: YES; COMPND 15 OTHER_DETAILS: PLACENTAL ISOFORM SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: DBS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-28A; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: CDC42; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET-21A KEYWDS GUANINE NUCLEOTIDE EXCHANGE FACTOR, SMALL G-PROTEIN, CDC42, DBS, KEYWDS 2 DH/PH, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.L.ROSSMAN,D.K.WORTHYLAKE,J.T.SNYDER,D.P.SIDEROVSKI,S.L.CAMPBELL, AUTHOR 2 J.SONDEK REVDAT 4 16-AUG-23 1KZG 1 REMARK REVDAT 3 27-OCT-21 1KZG 1 SEQADV REVDAT 2 24-FEB-09 1KZG 1 VERSN REVDAT 1 20-MAR-02 1KZG 0 JRNL AUTH K.L.ROSSMAN,D.K.WORTHYLAKE,J.T.SNYDER,D.P.SIDEROVSKI, JRNL AUTH 2 S.L.CAMPBELL,J.SONDEK JRNL TITL A CRYSTALLOGRAPHIC VIEW OF INTERACTIONS BETWEEN DBS AND JRNL TITL 2 CDC42: PH DOMAIN-ASSISTED GUANINE NUCLEOTIDE EXCHANGE. JRNL REF EMBO J. V. 21 1315 2002 JRNL REFN ISSN 0261-4189 JRNL PMID 11889037 JRNL DOI 10.1093/EMBOJ/21.6.1315 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 41214 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2169 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.72 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5044 REMARK 3 BIN R VALUE (WORKING SET) : 0.3160 REMARK 3 BIN FREE R VALUE : 0.3130 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 257 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8281 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 115 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 50.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.86000 REMARK 3 B22 (A**2) : 2.32000 REMARK 3 B33 (A**2) : -5.17000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.34 REMARK 3 ESD FROM SIGMAA (A) : 0.38 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.43 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.51 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : CNS BULK SOLVENT MODEL USED REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 41.30 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1KZG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-FEB-02. REMARK 100 THE DEPOSITION ID IS D_1000015503. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-NOV-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43383 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 31.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: DBS/CDC42 (1KZ7) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000,TRIS HCL, NAFORMATE, PH 7.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.66000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 116.39000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.09500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 116.39000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.66000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.09500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 622 REMARK 465 GLY A 623 REMARK 465 HIS A 847 REMARK 465 THR A 848 REMARK 465 LYS A 849 REMARK 465 VAL A 850 REMARK 465 LYS A 851 REMARK 465 SER A 966 REMARK 465 LEU A 967 REMARK 465 GLU A 968 REMARK 465 HIS A 969 REMARK 465 HIS A 970 REMARK 465 HIS A 971 REMARK 465 HIS A 972 REMARK 465 HIS A 973 REMARK 465 HIS A 974 REMARK 465 MET C 1622 REMARK 465 GLY C 1623 REMARK 465 LYS C 1845 REMARK 465 GLY C 1846 REMARK 465 HIS C 1847 REMARK 465 THR C 1848 REMARK 465 LYS C 1849 REMARK 465 VAL C 1850 REMARK 465 LYS C 1851 REMARK 465 LEU C 1961 REMARK 465 GLU C 1962 REMARK 465 GLN C 1963 REMARK 465 SER C 1964 REMARK 465 HIS C 1965 REMARK 465 SER C 1966 REMARK 465 LEU C 1967 REMARK 465 GLU C 1968 REMARK 465 HIS C 1969 REMARK 465 HIS C 1970 REMARK 465 HIS C 1971 REMARK 465 HIS C 1972 REMARK 465 HIS C 1973 REMARK 465 HIS C 1974 REMARK 465 GLU D 1178 REMARK 465 PRO D 1179 REMARK 465 PRO D 1180 REMARK 465 GLU D 1181 REMARK 465 PRO D 1182 REMARK 465 LYS D 1183 REMARK 465 LYS D 1184 REMARK 465 SER D 1185 REMARK 465 ARG D 1186 REMARK 465 ARG D 1187 REMARK 465 SER D 1188 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER C1956 OG REMARK 470 GLN C1957 CG CD OE1 NE2 REMARK 470 HIS C1958 CG ND1 CD2 CE1 NE2 REMARK 470 ARG C1959 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 658 -64.59 -127.29 REMARK 500 ILE A 696 -70.00 -99.30 REMARK 500 ASP A 842 49.38 -153.24 REMARK 500 ASN A 879 -71.01 -82.47 REMARK 500 TYR A 883 81.45 52.33 REMARK 500 ASN A 918 73.63 43.44 REMARK 500 ARG A 920 16.65 83.86 REMARK 500 LEU A 961 26.51 -78.31 REMARK 500 PRO B 29 103.15 -56.48 REMARK 500 LYS B 96 -58.37 -130.14 REMARK 500 ASP B 121 67.98 -108.90 REMARK 500 LYS B 131 -6.57 -58.74 REMARK 500 LYS B 150 33.27 70.94 REMARK 500 LYS B 153 170.47 178.56 REMARK 500 PRO B 180 79.21 -38.62 REMARK 500 LYS B 183 108.86 -29.13 REMARK 500 ARG B 187 -147.05 -78.72 REMARK 500 TYR C1658 -69.61 -128.13 REMARK 500 ASN C1685 32.11 -93.05 REMARK 500 ILE C1696 -74.99 -93.56 REMARK 500 ASP C1842 65.34 168.96 REMARK 500 HIS C1843 -150.43 -87.04 REMARK 500 ARG C1855 -111.81 -125.59 REMARK 500 LYS C1875 67.61 -64.60 REMARK 500 GLU C1881 -65.29 63.04 REMARK 500 GLU C1884 116.87 50.57 REMARK 500 ASN C1918 72.42 40.45 REMARK 500 ALA C1919 29.69 48.54 REMARK 500 ARG C1920 15.69 85.89 REMARK 500 ARG C1959 -64.24 -147.90 REMARK 500 THR D1003 109.05 81.41 REMARK 500 ASN D1026 22.45 49.74 REMARK 500 PRO D1029 100.55 -58.54 REMARK 500 SER D1030 -71.81 -61.24 REMARK 500 LYS D1096 -60.07 -127.95 REMARK 500 GLU D1127 -70.47 -52.90 REMARK 500 LYS D1131 6.85 -61.50 REMARK 500 ASN D1132 31.73 -146.82 REMARK 500 LYS D1150 35.00 72.88 REMARK 500 LYS D1153 169.27 177.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FOE RELATED DB: PDB REMARK 900 1FOE IS DH/PH FRAGMENT OF MURINE TIAM1 IN COMPLEX WITH HUMAN RAC1 REMARK 900 RELATED ID: 1KZ7 RELATED DB: PDB REMARK 900 1KZ7 IS DH/PH FRAGMENT OF MURINE DBS IN COMPLEX WITH HUMAN CDC42 DBREF 1KZG A 623 967 UNP Q64096 MCF2L_MOUSE 623 967 DBREF 1KZG C 1623 1967 UNP Q64096 MCF2L_MOUSE 623 967 DBREF 1KZG B 1 188 UNP P60953 CDC42_HUMAN 1 188 DBREF 1KZG D 1001 1188 UNP P60953 CDC42_HUMAN 1 188 SEQADV 1KZG MET A 622 UNP Q64096 INITIATING METHIONINE SEQADV 1KZG ILE A 696 UNP Q64096 ASN 696 SEE REMARK 999 SEQADV 1KZG PHE A 697 UNP Q64096 ILE 697 SEE REMARK 999 SEQADV 1KZG LEU A 698 UNP Q64096 PRO 698 SEE REMARK 999 SEQADV 1KZG ARG A 699 UNP Q64096 ALA 699 SEE REMARK 999 SEQADV 1KZG GLU A 700 UNP Q64096 GLY 700 SEE REMARK 999 SEQADV 1KZG LEU A 701 UNP Q64096 VAL 701 SEE REMARK 999 SEQADV 1KZG PHE A 889 UNP Q64096 TYR 889 ENGINEERED MUTATION SEQADV 1KZG GLU A 968 UNP Q64096 CLONING ARTIFACT SEQADV 1KZG HIS A 969 UNP Q64096 EXPRESSION TAG SEQADV 1KZG HIS A 970 UNP Q64096 EXPRESSION TAG SEQADV 1KZG HIS A 971 UNP Q64096 EXPRESSION TAG SEQADV 1KZG HIS A 972 UNP Q64096 EXPRESSION TAG SEQADV 1KZG HIS A 973 UNP Q64096 EXPRESSION TAG SEQADV 1KZG HIS A 974 UNP Q64096 EXPRESSION TAG SEQADV 1KZG MET C 1622 UNP Q64096 INITIATING METHIONINE SEQADV 1KZG ILE C 1696 UNP Q64096 ASN 696 SEE REMARK 999 SEQADV 1KZG PHE C 1697 UNP Q64096 ILE 697 SEE REMARK 999 SEQADV 1KZG LEU C 1698 UNP Q64096 PRO 698 SEE REMARK 999 SEQADV 1KZG ARG C 1699 UNP Q64096 ALA 699 SEE REMARK 999 SEQADV 1KZG GLU C 1700 UNP Q64096 GLY 700 SEE REMARK 999 SEQADV 1KZG LEU C 1701 UNP Q64096 VAL 701 SEE REMARK 999 SEQADV 1KZG PHE C 1889 UNP Q64096 TYR 889 ENGINEERED MUTATION SEQADV 1KZG GLU C 1968 UNP Q64096 CLONING ARTIFACT SEQADV 1KZG HIS C 1969 UNP Q64096 EXPRESSION TAG SEQADV 1KZG HIS C 1970 UNP Q64096 EXPRESSION TAG SEQADV 1KZG HIS C 1971 UNP Q64096 EXPRESSION TAG SEQADV 1KZG HIS C 1972 UNP Q64096 EXPRESSION TAG SEQADV 1KZG HIS C 1973 UNP Q64096 EXPRESSION TAG SEQADV 1KZG HIS C 1974 UNP Q64096 EXPRESSION TAG SEQADV 1KZG SER B 188 UNP P60953 CYS 188 ENGINEERED MUTATION SEQADV 1KZG SER D 1188 UNP P60953 CYS 188 ENGINEERED MUTATION SEQRES 1 A 353 MET GLY GLU GLU GLU GLU SER LEU ALA ILE LEU ARG ARG SEQRES 2 A 353 HIS VAL MET ASN GLU LEU LEU ASP THR GLU ARG ALA TYR SEQRES 3 A 353 VAL GLU GLU LEU LEU CYS VAL LEU GLU GLY TYR ALA ALA SEQRES 4 A 353 GLU MET ASP ASN PRO LEU MET ALA HIS LEU ILE SER THR SEQRES 5 A 353 GLY LEU GLN ASN LYS LYS ASN ILE LEU PHE GLY ASN MET SEQRES 6 A 353 GLU GLU ILE TYR HIS PHE HIS ASN ARG ILE PHE LEU ARG SEQRES 7 A 353 GLU LEU GLU SER CYS ILE ASP CYS PRO GLU LEU VAL GLY SEQRES 8 A 353 ARG CYS PHE LEU GLU ARG MET GLU GLU PHE GLN ILE TYR SEQRES 9 A 353 GLU LYS TYR CYS GLN ASN LYS PRO ARG SER GLU SER LEU SEQRES 10 A 353 TRP ARG GLN CYS SER ASP CYS PRO PHE PHE GLN GLU CYS SEQRES 11 A 353 GLN LYS LYS LEU ASP HIS LYS LEU SER LEU ASP SER TYR SEQRES 12 A 353 LEU LEU LYS PRO VAL GLN ARG ILE THR LYS TYR GLN LEU SEQRES 13 A 353 LEU LEU LYS GLU MET LEU LYS TYR SER LYS HIS CYS GLU SEQRES 14 A 353 GLY ALA GLU ASP LEU GLN GLU ALA LEU SER SER ILE LEU SEQRES 15 A 353 GLY ILE LEU LYS ALA VAL ASN ASP SER MET HIS LEU ILE SEQRES 16 A 353 ALA ILE THR GLY TYR ASP GLY ASN LEU GLY ASP LEU GLY SEQRES 17 A 353 LYS LEU LEU MET GLN GLY SER PHE SER VAL TRP THR ASP SEQRES 18 A 353 HIS LYS LYS GLY HIS THR LYS VAL LYS GLU LEU ALA ARG SEQRES 19 A 353 PHE LYS PRO MET GLN ARG HIS LEU PHE LEU HIS GLU LYS SEQRES 20 A 353 ALA VAL LEU PHE CYS LYS LYS ARG GLU GLU ASN GLY GLU SEQRES 21 A 353 GLY TYR GLU LYS ALA PRO SER PHE SER TYR LYS GLN SER SEQRES 22 A 353 LEU ASN MET THR ALA VAL GLY ILE THR GLU ASN VAL LYS SEQRES 23 A 353 GLY ASP THR LYS LYS PHE GLU ILE TRP TYR ASN ALA ARG SEQRES 24 A 353 GLU GLU VAL TYR ILE ILE GLN ALA PRO THR PRO GLU ILE SEQRES 25 A 353 LYS ALA ALA TRP VAL ASN GLU ILE ARG LYS VAL LEU THR SEQRES 26 A 353 SER GLN LEU GLN ALA CYS ARG GLU ALA SER GLN HIS ARG SEQRES 27 A 353 ALA LEU GLU GLN SER HIS SER LEU GLU HIS HIS HIS HIS SEQRES 28 A 353 HIS HIS SEQRES 1 B 188 MET GLN THR ILE LYS CYS VAL VAL VAL GLY ASP GLY ALA SEQRES 2 B 188 VAL GLY LYS THR CYS LEU LEU ILE SER TYR THR THR ASN SEQRES 3 B 188 LYS PHE PRO SER GLU TYR VAL PRO THR VAL PHE ASP ASN SEQRES 4 B 188 TYR ALA VAL THR VAL MET ILE GLY GLY GLU PRO TYR THR SEQRES 5 B 188 LEU GLY LEU PHE ASP THR ALA GLY GLN GLU ASP TYR ASP SEQRES 6 B 188 ARG LEU ARG PRO LEU SER TYR PRO GLN THR ASP VAL PHE SEQRES 7 B 188 LEU VAL CYS PHE SER VAL VAL SER PRO SER SER PHE GLU SEQRES 8 B 188 ASN VAL LYS GLU LYS TRP VAL PRO GLU ILE THR HIS HIS SEQRES 9 B 188 CYS PRO LYS THR PRO PHE LEU LEU VAL GLY THR GLN ILE SEQRES 10 B 188 ASP LEU ARG ASP ASP PRO SER THR ILE GLU LYS LEU ALA SEQRES 11 B 188 LYS ASN LYS GLN LYS PRO ILE THR PRO GLU THR ALA GLU SEQRES 12 B 188 LYS LEU ALA ARG ASP LEU LYS ALA VAL LYS TYR VAL GLU SEQRES 13 B 188 CYS SER ALA LEU THR GLN LYS GLY LEU LYS ASN VAL PHE SEQRES 14 B 188 ASP GLU ALA ILE LEU ALA ALA LEU GLU PRO PRO GLU PRO SEQRES 15 B 188 LYS LYS SER ARG ARG SER SEQRES 1 C 353 MET GLY GLU GLU GLU GLU SER LEU ALA ILE LEU ARG ARG SEQRES 2 C 353 HIS VAL MET ASN GLU LEU LEU ASP THR GLU ARG ALA TYR SEQRES 3 C 353 VAL GLU GLU LEU LEU CYS VAL LEU GLU GLY TYR ALA ALA SEQRES 4 C 353 GLU MET ASP ASN PRO LEU MET ALA HIS LEU ILE SER THR SEQRES 5 C 353 GLY LEU GLN ASN LYS LYS ASN ILE LEU PHE GLY ASN MET SEQRES 6 C 353 GLU GLU ILE TYR HIS PHE HIS ASN ARG ILE PHE LEU ARG SEQRES 7 C 353 GLU LEU GLU SER CYS ILE ASP CYS PRO GLU LEU VAL GLY SEQRES 8 C 353 ARG CYS PHE LEU GLU ARG MET GLU GLU PHE GLN ILE TYR SEQRES 9 C 353 GLU LYS TYR CYS GLN ASN LYS PRO ARG SER GLU SER LEU SEQRES 10 C 353 TRP ARG GLN CYS SER ASP CYS PRO PHE PHE GLN GLU CYS SEQRES 11 C 353 GLN LYS LYS LEU ASP HIS LYS LEU SER LEU ASP SER TYR SEQRES 12 C 353 LEU LEU LYS PRO VAL GLN ARG ILE THR LYS TYR GLN LEU SEQRES 13 C 353 LEU LEU LYS GLU MET LEU LYS TYR SER LYS HIS CYS GLU SEQRES 14 C 353 GLY ALA GLU ASP LEU GLN GLU ALA LEU SER SER ILE LEU SEQRES 15 C 353 GLY ILE LEU LYS ALA VAL ASN ASP SER MET HIS LEU ILE SEQRES 16 C 353 ALA ILE THR GLY TYR ASP GLY ASN LEU GLY ASP LEU GLY SEQRES 17 C 353 LYS LEU LEU MET GLN GLY SER PHE SER VAL TRP THR ASP SEQRES 18 C 353 HIS LYS LYS GLY HIS THR LYS VAL LYS GLU LEU ALA ARG SEQRES 19 C 353 PHE LYS PRO MET GLN ARG HIS LEU PHE LEU HIS GLU LYS SEQRES 20 C 353 ALA VAL LEU PHE CYS LYS LYS ARG GLU GLU ASN GLY GLU SEQRES 21 C 353 GLY TYR GLU LYS ALA PRO SER PHE SER TYR LYS GLN SER SEQRES 22 C 353 LEU ASN MET THR ALA VAL GLY ILE THR GLU ASN VAL LYS SEQRES 23 C 353 GLY ASP THR LYS LYS PHE GLU ILE TRP TYR ASN ALA ARG SEQRES 24 C 353 GLU GLU VAL TYR ILE ILE GLN ALA PRO THR PRO GLU ILE SEQRES 25 C 353 LYS ALA ALA TRP VAL ASN GLU ILE ARG LYS VAL LEU THR SEQRES 26 C 353 SER GLN LEU GLN ALA CYS ARG GLU ALA SER GLN HIS ARG SEQRES 27 C 353 ALA LEU GLU GLN SER HIS SER LEU GLU HIS HIS HIS HIS SEQRES 28 C 353 HIS HIS SEQRES 1 D 188 MET GLN THR ILE LYS CYS VAL VAL VAL GLY ASP GLY ALA SEQRES 2 D 188 VAL GLY LYS THR CYS LEU LEU ILE SER TYR THR THR ASN SEQRES 3 D 188 LYS PHE PRO SER GLU TYR VAL PRO THR VAL PHE ASP ASN SEQRES 4 D 188 TYR ALA VAL THR VAL MET ILE GLY GLY GLU PRO TYR THR SEQRES 5 D 188 LEU GLY LEU PHE ASP THR ALA GLY GLN GLU ASP TYR ASP SEQRES 6 D 188 ARG LEU ARG PRO LEU SER TYR PRO GLN THR ASP VAL PHE SEQRES 7 D 188 LEU VAL CYS PHE SER VAL VAL SER PRO SER SER PHE GLU SEQRES 8 D 188 ASN VAL LYS GLU LYS TRP VAL PRO GLU ILE THR HIS HIS SEQRES 9 D 188 CYS PRO LYS THR PRO PHE LEU LEU VAL GLY THR GLN ILE SEQRES 10 D 188 ASP LEU ARG ASP ASP PRO SER THR ILE GLU LYS LEU ALA SEQRES 11 D 188 LYS ASN LYS GLN LYS PRO ILE THR PRO GLU THR ALA GLU SEQRES 12 D 188 LYS LEU ALA ARG ASP LEU LYS ALA VAL LYS TYR VAL GLU SEQRES 13 D 188 CYS SER ALA LEU THR GLN LYS GLY LEU LYS ASN VAL PHE SEQRES 14 D 188 ASP GLU ALA ILE LEU ALA ALA LEU GLU PRO PRO GLU PRO SEQRES 15 D 188 LYS LYS SER ARG ARG SER FORMUL 5 HOH *115(H2 O) HELIX 1 1 GLU A 624 TYR A 658 1 35 HELIX 2 2 ALA A 659 ASP A 663 5 5 HELIX 3 3 ASN A 664 ALA A 668 5 5 HELIX 4 4 SER A 672 ASN A 677 1 6 HELIX 5 5 LYS A 678 GLY A 684 1 7 HELIX 6 6 ASN A 685 ILE A 696 1 12 HELIX 7 7 ILE A 696 SER A 703 1 8 HELIX 8 8 CYS A 707 GLU A 709 5 3 HELIX 9 9 LEU A 710 ARG A 718 1 9 HELIX 10 10 MET A 719 MET A 719 5 1 HELIX 11 11 GLU A 720 PHE A 722 5 3 HELIX 12 12 GLN A 723 SER A 743 1 21 HELIX 13 13 CYS A 745 ASP A 756 1 12 HELIX 14 14 SER A 760 THR A 773 1 14 HELIX 15 15 LYS A 774 TYR A 785 1 12 HELIX 16 16 GLY A 791 ILE A 816 1 26 HELIX 17 17 ASN A 824 GLY A 829 5 6 HELIX 18 18 THR A 930 LEU A 961 1 32 HELIX 19 19 GLY B 15 ASN B 26 1 12 HELIX 20 20 LEU B 67 TYR B 72 5 6 HELIX 21 21 SER B 86 LYS B 96 1 11 HELIX 22 22 LYS B 96 CYS B 105 1 10 HELIX 23 23 GLN B 116 ASP B 121 1 6 HELIX 24 24 ASP B 122 LYS B 131 1 10 HELIX 25 25 THR B 138 LYS B 150 1 13 HELIX 26 26 GLY B 164 LEU B 177 1 14 HELIX 27 27 GLU C 1624 TYR C 1658 1 35 HELIX 28 28 ALA C 1659 ASP C 1663 5 5 HELIX 29 29 SER C 1672 ASN C 1677 1 6 HELIX 30 30 LYS C 1678 GLY C 1684 1 7 HELIX 31 31 ASN C 1685 ILE C 1696 1 12 HELIX 32 32 ILE C 1696 SER C 1703 1 8 HELIX 33 33 CYS C 1707 GLU C 1709 5 3 HELIX 34 34 LEU C 1710 GLU C 1717 1 8 HELIX 35 35 ARG C 1718 MET C 1719 5 2 HELIX 36 36 GLU C 1720 PHE C 1722 5 3 HELIX 37 37 GLN C 1723 SER C 1743 1 21 HELIX 38 38 CYS C 1745 ASP C 1756 1 12 HELIX 39 39 SER C 1760 LEU C 1766 1 7 HELIX 40 40 LEU C 1766 THR C 1773 1 8 HELIX 41 41 LYS C 1774 TYR C 1785 1 12 HELIX 42 42 GLY C 1791 ILE C 1816 1 26 HELIX 43 43 ASN C 1824 GLY C 1829 5 6 HELIX 44 44 THR C 1930 ALA C 1955 1 26 HELIX 45 45 GLY D 1015 ASN D 1026 1 12 HELIX 46 46 LEU D 1067 TYR D 1072 5 6 HELIX 47 47 SER D 1086 LYS D 1096 1 11 HELIX 48 48 LYS D 1096 CYS D 1105 1 10 HELIX 49 49 GLN D 1116 ARG D 1120 5 5 HELIX 50 50 ASP D 1122 LYS D 1131 1 10 HELIX 51 51 THR D 1138 LYS D 1150 1 13 HELIX 52 52 GLY D 1164 LEU D 1177 1 14 SHEET 1 A 8 ILE A 818 THR A 819 0 SHEET 2 A 8 SER A 888 ASN A 896 1 O PHE A 889 N THR A 819 SHEET 3 A 8 ALA A 869 ARG A 876 -1 N PHE A 872 O GLN A 893 SHEET 4 A 8 MET A 859 HIS A 866 -1 N PHE A 864 O LEU A 871 SHEET 5 A 8 LEU A 831 THR A 841 -1 N VAL A 839 O MET A 859 SHEET 6 A 8 GLU A 922 GLN A 927 -1 O ILE A 925 N TRP A 840 SHEET 7 A 8 LYS A 912 TYR A 917 -1 N TYR A 917 O GLU A 922 SHEET 8 A 8 VAL A 900 THR A 903 -1 N THR A 903 O GLU A 914 SHEET 1 B 6 TYR B 40 ILE B 46 0 SHEET 2 B 6 GLU B 49 PHE B 56 -1 O LEU B 53 N VAL B 42 SHEET 3 B 6 THR B 3 GLY B 10 1 N ILE B 4 O THR B 52 SHEET 4 B 6 VAL B 77 SER B 83 1 O CYS B 81 N VAL B 9 SHEET 5 B 6 PHE B 110 THR B 115 1 O VAL B 113 N VAL B 80 SHEET 6 B 6 TYR B 154 GLU B 156 1 O VAL B 155 N LEU B 112 SHEET 1 C 8 ILE C1818 THR C1819 0 SHEET 2 C 8 PHE C1889 ASN C1896 1 O PHE C1889 N THR C1819 SHEET 3 C 8 ALA C1869 LYS C1874 -1 N LYS C1874 O SER C1890 SHEET 4 C 8 MET C1859 HIS C1866 -1 N PHE C1864 O LEU C1871 SHEET 5 C 8 LEU C1831 THR C1841 -1 N MET C1833 O LEU C1865 SHEET 6 C 8 GLU C1922 GLN C1927 -1 O ILE C1925 N TRP C1840 SHEET 7 C 8 LYS C1912 TYR C1917 -1 N TYR C1917 O GLU C1922 SHEET 8 C 8 VAL C1900 THR C1903 -1 N THR C1903 O GLU C1914 SHEET 1 D 6 TYR D1040 ILE D1046 0 SHEET 2 D 6 GLU D1049 PHE D1056 -1 O LEU D1055 N TYR D1040 SHEET 3 D 6 ILE D1004 GLY D1010 1 N ILE D1004 O THR D1052 SHEET 4 D 6 VAL D1077 SER D1083 1 O CYS D1081 N VAL D1009 SHEET 5 D 6 PHE D1110 THR D1115 1 O VAL D1113 N VAL D1080 SHEET 6 D 6 LYS D1153 GLU D1156 1 O VAL D1155 N LEU D1112 CRYST1 67.320 88.190 232.780 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014854 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011339 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004296 0.00000