HEADER ANTIFREEZE PROTEIN 16-FEB-02 1L1I TITLE SOLUTION STRUCTURE OF THE TENEBRIO MOLITOR ANTIFREEZE PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: THERMAL HYSTERESIS PROTEIN ISOFORM YL-1 (2-14); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TENEBRIO MOLITOR; SOURCE 3 ORGANISM_COMMON: YELLOW MEALWORM; SOURCE 4 ORGANISM_TAXID: 7067; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-HELIX, ANTIFREEZE PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.E.DALEY,L.SPYRACOPOULOS,Z.JIA,P.L.DAVIES,B.D.SYKES REVDAT 3 23-FEB-22 1L1I 1 REMARK REVDAT 2 24-FEB-09 1L1I 1 VERSN REVDAT 1 22-MAY-02 1L1I 0 JRNL AUTH M.E.DALEY,L.SPYRACOPOULOS,Z.JIA,P.L.DAVIES,B.D.SYKES JRNL TITL STRUCTURE AND DYNAMICS OF A BETA-HELICAL ANTIFREEZE PROTEIN. JRNL REF BIOCHEMISTRY V. 41 5515 2002 JRNL REFN ISSN 0006-2960 JRNL PMID 11969412 JRNL DOI 10.1021/BI0121252 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1B, CNS 1.0 REMARK 3 AUTHORS : VARIAN ASSOCIATES, INC. (VNMR), BRUNGER (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1L1I COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-FEB-02. REMARK 100 THE DEPOSITION ID IS D_1000015556. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : 0MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.4 MM TMAFP U-15N; 90% H2O, 10% REMARK 210 D2O; 1MM TMAFP; 90% H2O, 10% D2O; REMARK 210 1MM TMAFP; 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-EDITED_TOCSY; HNHA; HNHB; REMARK 210 3D_15N-SEPARATED_NOESY; 2D_TOCSY; REMARK 210 2D_NOESY; 13C-HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : UNITY; INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE SGI6, NMRVIEW 4.1.2, CNS REMARK 210 1.0 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 CYS A 2 -40.12 -178.65 REMARK 500 1 ALA A 6 23.47 -156.13 REMARK 500 1 CYS A 8 -97.35 -117.96 REMARK 500 1 SER A 10 -57.80 -132.02 REMARK 500 1 CYS A 18 -77.04 -136.01 REMARK 500 1 PRO A 22 -83.82 -85.18 REMARK 500 1 ASN A 29 -175.08 81.47 REMARK 500 1 SER A 30 -161.23 82.76 REMARK 500 1 HIS A 32 49.25 170.05 REMARK 500 1 LYS A 35 32.49 -97.06 REMARK 500 1 THR A 40 -128.35 -88.30 REMARK 500 1 SER A 42 -145.89 -142.30 REMARK 500 1 THR A 43 -141.26 -141.82 REMARK 500 1 ASP A 44 89.70 20.63 REMARK 500 1 ASN A 53 39.30 160.73 REMARK 500 1 ASP A 56 31.97 -148.48 REMARK 500 1 GLU A 59 40.59 -96.10 REMARK 500 1 TYR A 70 92.39 -48.33 REMARK 500 1 LYS A 71 80.34 73.77 REMARK 500 1 THR A 76 -70.60 -121.76 REMARK 500 1 PRO A 82 92.96 -30.18 REMARK 500 2 ALA A 6 -75.43 65.87 REMARK 500 2 THR A 12 -44.12 -144.06 REMARK 500 2 ASN A 23 34.46 -157.99 REMARK 500 2 ASN A 29 -163.88 81.14 REMARK 500 2 SER A 30 -169.17 82.52 REMARK 500 2 HIS A 32 50.21 -177.54 REMARK 500 2 THR A 40 -150.20 -111.81 REMARK 500 2 SER A 42 -151.78 -145.69 REMARK 500 2 THR A 43 -141.13 -141.90 REMARK 500 2 ASP A 44 80.00 9.77 REMARK 500 2 CYS A 51 139.95 -177.19 REMARK 500 2 ASN A 53 28.01 45.64 REMARK 500 2 ASP A 56 23.20 -148.07 REMARK 500 2 GLU A 59 39.43 -97.27 REMARK 500 2 TYR A 70 49.68 -89.95 REMARK 500 2 LYS A 71 42.65 177.13 REMARK 500 2 ASN A 77 54.79 -152.45 REMARK 500 3 CYS A 2 31.84 -157.35 REMARK 500 3 THR A 3 24.95 -144.29 REMARK 500 3 SER A 10 34.41 -148.99 REMARK 500 3 CYS A 18 -77.76 -147.84 REMARK 500 3 PRO A 22 -80.53 -84.32 REMARK 500 3 ASN A 29 163.79 73.80 REMARK 500 3 SER A 30 143.95 82.34 REMARK 500 3 HIS A 32 40.65 88.90 REMARK 500 3 LYS A 35 32.25 -96.02 REMARK 500 3 THR A 40 48.18 -90.43 REMARK 500 3 SER A 42 -158.24 -149.93 REMARK 500 3 THR A 43 -141.14 -140.93 REMARK 500 REMARK 500 THIS ENTRY HAS 381 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1EZG RELATED DB: PDB REMARK 900 1EZG IS THE CRYSTAL STRUCTURE OF THE TMAFP DBREF 1L1I A 1 84 UNP O16119 O16119_TENMO 29 112 SEQRES 1 A 84 GLN CYS THR GLY GLY ALA ASP CYS THR SER CYS THR GLY SEQRES 2 A 84 ALA CYS THR GLY CYS GLY ASN CYS PRO ASN ALA VAL THR SEQRES 3 A 84 CYS THR ASN SER GLN HIS CYS VAL LYS ALA ASN THR CYS SEQRES 4 A 84 THR GLY SER THR ASP CYS ASN THR ALA GLN THR CYS THR SEQRES 5 A 84 ASN SER LYS ASP CYS PHE GLU ALA ASN THR CYS THR ASP SEQRES 6 A 84 SER THR ASN CYS TYR LYS ALA THR ALA CYS THR ASN SER SEQRES 7 A 84 SER GLY CYS PRO GLY HIS SHEET 1 A 5 ALA A 14 THR A 16 0 SHEET 2 A 5 VAL A 25 THR A 28 1 O VAL A 25 N ALA A 14 SHEET 3 A 5 ASN A 37 THR A 40 1 O ASN A 37 N THR A 26 SHEET 4 A 5 GLN A 49 THR A 52 1 O GLN A 49 N THR A 38 SHEET 5 A 5 ASN A 61 THR A 64 1 O ASN A 61 N THR A 50 SSBOND 1 CYS A 2 CYS A 11 1555 1555 2.03 SSBOND 2 CYS A 8 CYS A 18 1555 1555 2.03 SSBOND 3 CYS A 15 CYS A 21 1555 1555 2.03 SSBOND 4 CYS A 27 CYS A 33 1555 1555 2.03 SSBOND 5 CYS A 39 CYS A 45 1555 1555 2.03 SSBOND 6 CYS A 51 CYS A 57 1555 1555 2.03 SSBOND 7 CYS A 63 CYS A 69 1555 1555 2.03 SSBOND 8 CYS A 75 CYS A 81 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1