data_1L2D # _entry.id 1L2D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1L2D pdb_00001l2d 10.2210/pdb1l2d/pdb NDB PD0296 ? ? RCSB RCSB015577 ? ? WWPDB D_1000015577 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1L1T '1L1T IS MutM (Fpg) Bound to Abasic-Site Containing DNA' unspecified PDB 1L1Z '1l1z is MutM (Fpg) Covalent-DNA Intermediate' unspecified PDB 1L2B '1l2b is MutM (Fpg) DNA End-Product Structure' unspecified PDB 1L2c '1l2c is MutM (Fpg)-DNA Estranged Thymine Mismatch Recognition Complex' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1L2D _pdbx_database_status.recvd_initial_deposition_date 2002-02-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fromme, J.C.' 1 'Verdine, G.L.' 2 # _citation.id primary _citation.title 'Structural insights into lesion recognition and repair by the bacterial 8-oxoguanine DNA glycosylase MutM.' _citation.journal_abbrev Nat.Struct.Biol. _citation.journal_volume 9 _citation.page_first 544 _citation.page_last 552 _citation.year 2002 _citation.journal_id_ASTM NSBIEW _citation.country US _citation.journal_id_ISSN 1072-8368 _citation.journal_id_CSD 2024 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12055620 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fromme, J.C.' 1 ? primary 'Verdine, G.L.' 2 ? # _cell.entry_id 1L2D _cell.length_a 44.906 _cell.length_b 94.486 _cell.length_c 104.384 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1L2D _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*AP*G*GP*TP*AP*GP*AP*CP*GP*TP*GP*GP*AP*CP*GP*C)-3'" 4988.241 1 ? ? ? ? 2 polymer syn "5'-D(*TP*GP*C*GP*TP*CP*CP*AP*(HPD)P*GP*TP*CP*TP*AP*CP*C)-3'" 4719.046 1 ? ? ? ? 3 polymer man MutM 30739.510 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 5 water nat water 18.015 181 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name FPG # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DG)(DG)(DT)(DA)(DG)(DA)(DC)(DG)(DT)(DG)(DG)(DA)(DC)(DG)(DC)' AGGTAGACGTGGACGC B ? 2 polydeoxyribonucleotide no yes '(DT)(DG)(DC)(DG)(DT)(DC)(DC)(DA)(HPD)(DG)(DT)(DC)(DT)(DA)(DC)(DC)' TGCGTCCAXGTCTACC C ? 3 'polypeptide(L)' no no ;MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGR YAVASALEPLEPHTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVK ALLLDQTVVAGFGNIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVMKGGSTVRTYVNTQGEAGTFQHHLY VYGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQR ; ;MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGR YAVASALEPLEPHTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVK ALLLDQTVVAGFGNIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVMKGGSTVRTYVNTQGEAGTFQHHLY VYGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQR ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DG n 1 3 DG n 1 4 DT n 1 5 DA n 1 6 DG n 1 7 DA n 1 8 DC n 1 9 DG n 1 10 DT n 1 11 DG n 1 12 DG n 1 13 DA n 1 14 DC n 1 15 DG n 1 16 DC n 2 1 DT n 2 2 DG n 2 3 DC n 2 4 DG n 2 5 DT n 2 6 DC n 2 7 DC n 2 8 DA n 2 9 HPD n 2 10 DG n 2 11 DT n 2 12 DC n 2 13 DT n 2 14 DA n 2 15 DC n 2 16 DC n 3 1 MET n 3 2 PRO n 3 3 GLU n 3 4 LEU n 3 5 PRO n 3 6 GLU n 3 7 VAL n 3 8 GLU n 3 9 THR n 3 10 ILE n 3 11 ARG n 3 12 ARG n 3 13 THR n 3 14 LEU n 3 15 LEU n 3 16 PRO n 3 17 LEU n 3 18 ILE n 3 19 VAL n 3 20 GLY n 3 21 LYS n 3 22 THR n 3 23 ILE n 3 24 GLU n 3 25 ASP n 3 26 VAL n 3 27 ARG n 3 28 ILE n 3 29 PHE n 3 30 TRP n 3 31 PRO n 3 32 ASN n 3 33 ILE n 3 34 ILE n 3 35 ARG n 3 36 HIS n 3 37 PRO n 3 38 ARG n 3 39 ASP n 3 40 SER n 3 41 GLU n 3 42 ALA n 3 43 PHE n 3 44 ALA n 3 45 ALA n 3 46 ARG n 3 47 MET n 3 48 ILE n 3 49 GLY n 3 50 GLN n 3 51 THR n 3 52 VAL n 3 53 ARG n 3 54 GLY n 3 55 LEU n 3 56 GLU n 3 57 ARG n 3 58 ARG n 3 59 GLY n 3 60 LYS n 3 61 PHE n 3 62 LEU n 3 63 LYS n 3 64 PHE n 3 65 LEU n 3 66 LEU n 3 67 ASP n 3 68 ARG n 3 69 ASP n 3 70 ALA n 3 71 LEU n 3 72 ILE n 3 73 SER n 3 74 HIS n 3 75 LEU n 3 76 ARG n 3 77 MET n 3 78 GLU n 3 79 GLY n 3 80 ARG n 3 81 TYR n 3 82 ALA n 3 83 VAL n 3 84 ALA n 3 85 SER n 3 86 ALA n 3 87 LEU n 3 88 GLU n 3 89 PRO n 3 90 LEU n 3 91 GLU n 3 92 PRO n 3 93 HIS n 3 94 THR n 3 95 HIS n 3 96 VAL n 3 97 VAL n 3 98 PHE n 3 99 CYS n 3 100 PHE n 3 101 THR n 3 102 ASP n 3 103 GLY n 3 104 SER n 3 105 GLU n 3 106 LEU n 3 107 ARG n 3 108 TYR n 3 109 ARG n 3 110 ASP n 3 111 VAL n 3 112 ARG n 3 113 LYS n 3 114 PHE n 3 115 GLY n 3 116 THR n 3 117 MET n 3 118 HIS n 3 119 VAL n 3 120 TYR n 3 121 ALA n 3 122 LYS n 3 123 GLU n 3 124 GLU n 3 125 ALA n 3 126 ASP n 3 127 ARG n 3 128 ARG n 3 129 PRO n 3 130 PRO n 3 131 LEU n 3 132 ALA n 3 133 GLU n 3 134 LEU n 3 135 GLY n 3 136 PRO n 3 137 GLU n 3 138 PRO n 3 139 LEU n 3 140 SER n 3 141 PRO n 3 142 ALA n 3 143 PHE n 3 144 SER n 3 145 PRO n 3 146 ALA n 3 147 VAL n 3 148 LEU n 3 149 ALA n 3 150 GLU n 3 151 ARG n 3 152 ALA n 3 153 VAL n 3 154 LYS n 3 155 THR n 3 156 LYS n 3 157 ARG n 3 158 SER n 3 159 VAL n 3 160 LYS n 3 161 ALA n 3 162 LEU n 3 163 LEU n 3 164 LEU n 3 165 ASP n 3 166 GLN n 3 167 THR n 3 168 VAL n 3 169 VAL n 3 170 ALA n 3 171 GLY n 3 172 PHE n 3 173 GLY n 3 174 ASN n 3 175 ILE n 3 176 TYR n 3 177 VAL n 3 178 ASP n 3 179 GLU n 3 180 SER n 3 181 LEU n 3 182 PHE n 3 183 ARG n 3 184 ALA n 3 185 GLY n 3 186 ILE n 3 187 LEU n 3 188 PRO n 3 189 GLY n 3 190 ARG n 3 191 PRO n 3 192 ALA n 3 193 ALA n 3 194 SER n 3 195 LEU n 3 196 SER n 3 197 SER n 3 198 LYS n 3 199 GLU n 3 200 ILE n 3 201 GLU n 3 202 ARG n 3 203 LEU n 3 204 HIS n 3 205 GLU n 3 206 GLU n 3 207 MET n 3 208 VAL n 3 209 ALA n 3 210 THR n 3 211 ILE n 3 212 GLY n 3 213 GLU n 3 214 ALA n 3 215 VAL n 3 216 MET n 3 217 LYS n 3 218 GLY n 3 219 GLY n 3 220 SER n 3 221 THR n 3 222 VAL n 3 223 ARG n 3 224 THR n 3 225 TYR n 3 226 VAL n 3 227 ASN n 3 228 THR n 3 229 GLN n 3 230 GLY n 3 231 GLU n 3 232 ALA n 3 233 GLY n 3 234 THR n 3 235 PHE n 3 236 GLN n 3 237 HIS n 3 238 HIS n 3 239 LEU n 3 240 TYR n 3 241 VAL n 3 242 TYR n 3 243 GLY n 3 244 ARG n 3 245 GLN n 3 246 GLY n 3 247 ASN n 3 248 PRO n 3 249 CYS n 3 250 LYS n 3 251 ARG n 3 252 CYS n 3 253 GLY n 3 254 THR n 3 255 PRO n 3 256 ILE n 3 257 GLU n 3 258 LYS n 3 259 THR n 3 260 VAL n 3 261 VAL n 3 262 ALA n 3 263 GLY n 3 264 ARG n 3 265 GLY n 3 266 THR n 3 267 HIS n 3 268 TYR n 3 269 CYS n 3 270 PRO n 3 271 ARG n 3 272 CYS n 3 273 GLN n 3 274 ARG n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Geobacillus _entity_src_gen.pdbx_gene_src_gene MutM _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Geobacillus stearothermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1422 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 1L2D 1L2D ? ? ? 2 2 PDB 1L2D 1L2D ? ? ? 3 3 PDB 1L2D 1L2D ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1L2D B 1 ? 16 ? 1L2D -1 ? 14 ? -1 14 2 2 1L2D C 1 ? 16 ? 1L2D 10 ? 25 ? 10 25 3 3 1L2D A 1 ? 274 ? 1L2D 1 ? 274 ? 1 274 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 HPD non-polymer . 1-HYDROXY-PENTANE-3,4-DIOL-5-PHOSPHATE ;OPEN FORM OF 2'-DEOXY-RIBOFURANOSE-5'-PHOSPHATE ; 'C5 H13 O7 P' 216.126 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 1L2D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 59.62 _exptl_crystal.density_Matthews 2.71 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'PEG 8000, magnesium acetate, cacodylate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 'PEG 8000' ? ? ? 1 2 1 'magnesium acetate' ? ? ? 1 3 1 cacodylate ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2002-01-26 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CHESS BEAMLINE A1' _diffrn_source.pdbx_synchrotron_site CHESS _diffrn_source.pdbx_synchrotron_beamline A1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9 # _reflns.entry_id 1L2D _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 1 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.0 _reflns.number_obs 30608 _reflns.number_all 30867 _reflns.percent_possible_obs 99.2 _reflns.pdbx_Rmerge_I_obs 0.1270000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.0 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.6 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 94.0 _reflns_shell.Rmerge_I_obs 0.4700000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.7 _reflns_shell.pdbx_redundancy 3.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1L2D _refine.ls_number_reflns_obs 26457 _refine.ls_number_reflns_all 30810 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 50 _refine.ls_d_res_high 2.0 _refine.ls_percent_reflns_obs 85.9 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2170000 _refine.ls_R_factor_R_free 0.2510000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10 _refine.ls_number_reflns_R_free 2616 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 35.8 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 1L1T _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF 10000 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1L2D _refine_analyze.Luzzati_coordinate_error_obs 0.24 _refine_analyze.Luzzati_sigma_a_obs 0.09 _refine_analyze.Luzzati_d_res_low_obs 5.0 _refine_analyze.Luzzati_coordinate_error_free 0.27 _refine_analyze.Luzzati_sigma_a_free 0.12 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1961 _refine_hist.pdbx_number_atoms_nucleic_acid 479 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 181 _refine_hist.number_atoms_total 2622 _refine_hist.d_res_high 2.0 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.16 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.4 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 2.0 _refine_ls_shell.d_res_low 2.07 _refine_ls_shell.number_reflns_R_work 1697 _refine_ls_shell.R_factor_R_work 0.2117000 _refine_ls_shell.percent_reflns_obs 61.9 _refine_ls_shell.R_factor_R_free 0.2539000 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 10 _refine_ls_shell.number_reflns_R_free 178 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 1L2D _struct.title 'MutM (Fpg)-DNA Estranged Guanine Mismatch Recognition Complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1L2D _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'DNA Repair, DNA glycosylase, zinc finger, HYDROLASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU C 3 ? VAL C 19 ? GLU A 3 VAL A 19 1 ? 17 HELX_P HELX_P2 2 TRP C 30 ? ASN C 32 ? TRP A 30 ASN A 32 5 ? 3 HELX_P HELX_P3 3 ASP C 39 ? ILE C 48 ? ASP A 39 ILE A 48 1 ? 10 HELX_P HELX_P4 6 SER C 158 ? ASP C 165 ? SER A 158 ASP A 165 1 ? 8 HELX_P HELX_P5 7 GLY C 173 ? GLY C 185 ? GLY A 173 GLY A 185 1 ? 13 HELX_P HELX_P6 8 PRO C 191 ? LEU C 195 ? PRO A 191 LEU A 195 5 ? 5 HELX_P HELX_P7 9 SER C 196 ? LYS C 217 ? SER A 196 LYS A 217 1 ? 22 HELX_P HELX_P8 10 PHE C 235 ? LEU C 239 ? PHE A 235 LEU A 239 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? B DA 8 "O3'" ? ? ? 1_555 B HPD 9 P ? ? C DA 17 C HPD 18 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale2 covale one ? B HPD 9 "O3'" ? ? ? 1_555 B DG 10 P ? ? C HPD 18 C DG 19 1_555 ? ? ? ? ? ? ? 1.607 ? ? metalc1 metalc ? ? C CYS 249 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 249 A ZN 300 1_555 ? ? ? ? ? ? ? 2.471 ? ? metalc2 metalc ? ? C CYS 252 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 252 A ZN 300 1_555 ? ? ? ? ? ? ? 2.399 ? ? metalc3 metalc ? ? C CYS 269 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 269 A ZN 300 1_555 ? ? ? ? ? ? ? 2.404 ? ? metalc4 metalc ? ? C CYS 272 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 272 A ZN 300 1_555 ? ? ? ? ? ? ? 2.279 ? ? hydrog1 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 15 N4 ? ? B DG 1 C DC 24 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog2 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 13 O4 ? ? B DA 3 C DT 22 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog3 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 12 N3 ? ? B DG 4 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 12 O2 ? ? B DG 4 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 12 N4 ? ? B DG 4 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 11 N3 ? ? B DA 5 C DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 11 O4 ? ? B DA 5 C DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 10 N1 ? ? B DC 6 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 10 O6 ? ? B DC 6 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 10 N2 ? ? B DC 6 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 8 N1 ? ? B DT 8 C DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA 8 N6 ? ? B DT 8 C DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DC 7 N3 ? ? B DG 9 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 11 N2 ? ? ? 1_555 B DC 7 O2 ? ? B DG 9 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 11 O6 ? ? ? 1_555 B DC 7 N4 ? ? B DG 9 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 6 N3 ? ? B DG 10 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 6 O2 ? ? B DG 10 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 6 N4 ? ? B DG 10 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 13 N1 ? ? ? 1_555 B DT 5 N3 ? ? B DA 11 C DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DA 13 N6 ? ? ? 1_555 B DT 5 O4 ? ? B DA 11 C DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 14 N3 ? ? ? 1_555 B DG 4 N1 ? ? B DC 12 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 14 N4 ? ? ? 1_555 B DG 4 O6 ? ? B DC 12 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 14 O2 ? ? ? 1_555 B DG 4 N2 ? ? B DC 12 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 HIS 36 C . ? HIS 36 A PRO 37 C ? PRO 37 A 1 -0.47 2 PRO 129 C . ? PRO 129 A PRO 130 C ? PRO 130 A 1 0.10 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE C 23 ? ILE C 28 ? ILE A 23 ILE A 28 A 2 THR C 94 ? PHE C 100 ? THR A 94 PHE A 100 A 3 SER C 104 ? ARG C 109 ? SER A 104 ARG A 109 B 1 ILE C 34 ? HIS C 36 ? ILE A 34 HIS A 36 B 2 THR C 116 ? ALA C 121 ? THR A 116 ALA A 121 B 3 ASP C 69 ? HIS C 74 ? ASP A 69 HIS A 74 B 4 PHE C 61 ? LEU C 65 ? PHE A 61 LEU A 65 B 5 GLY C 54 ? ARG C 58 ? GLY A 54 ARG A 58 C 1 GLU C 257 ? VAL C 261 ? GLU A 257 VAL A 261 C 2 ARG C 264 ? TYR C 268 ? ARG A 264 TYR A 268 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASP C 25 ? N ASP A 25 O CYS C 99 ? O CYS A 99 A 2 3 N PHE C 98 ? N PHE A 98 O LEU C 106 ? O LEU A 106 B 1 2 N HIS C 36 ? N HIS A 36 O VAL C 119 ? O VAL A 119 B 2 3 O HIS C 118 ? O HIS A 118 N ILE C 72 ? N ILE A 72 B 3 4 O LEU C 71 ? O LEU A 71 N PHE C 64 ? N PHE A 64 B 4 5 O LYS C 63 ? O LYS A 63 N GLU C 56 ? N GLU A 56 C 1 2 N THR C 259 ? N THR A 259 O THR C 266 ? O THR A 266 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id ZN _struct_site.pdbx_auth_seq_id 300 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE ZN A 300' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS C 249 ? CYS A 249 . ? 1_555 ? 2 AC1 4 CYS C 252 ? CYS A 252 . ? 1_555 ? 3 AC1 4 CYS C 269 ? CYS A 269 . ? 1_555 ? 4 AC1 4 CYS C 272 ? CYS A 272 . ? 1_555 ? # _database_PDB_matrix.entry_id 1L2D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1L2D _atom_sites.fract_transf_matrix[1][1] 0.022269 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010584 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009580 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 -1 ? ? ? B . n A 1 2 DG 2 0 ? ? ? B . n A 1 3 DG 3 1 1 DG GUA B . n A 1 4 DT 4 2 2 DT THY B . n A 1 5 DA 5 3 3 DA ADE B . n A 1 6 DG 6 4 4 DG GUA B . n A 1 7 DA 7 5 5 DA ADE B . n A 1 8 DC 8 6 6 DC CYT B . n A 1 9 DG 9 7 7 DG GUA B . n A 1 10 DT 10 8 8 DT THY B . n A 1 11 DG 11 9 9 DG GUA B . n A 1 12 DG 12 10 10 DG GUA B . n A 1 13 DA 13 11 11 DA ADE B . n A 1 14 DC 14 12 12 DC CYT B . n A 1 15 DG 15 13 ? ? ? B . n A 1 16 DC 16 14 ? ? ? B . n B 2 1 DT 1 10 ? ? ? C . n B 2 2 DG 2 11 ? ? ? C . n B 2 3 DC 3 12 ? ? ? C . n B 2 4 DG 4 13 13 DG GUA C . n B 2 5 DT 5 14 14 DT THY C . n B 2 6 DC 6 15 15 DC CYT C . n B 2 7 DC 7 16 16 DC CYT C . n B 2 8 DA 8 17 17 DA ADE C . n B 2 9 HPD 9 18 18 HPD PED C . n B 2 10 DG 10 19 19 DG GUA C . n B 2 11 DT 11 20 20 DT THY C . n B 2 12 DC 12 21 21 DC CYT C . n B 2 13 DT 13 22 22 DT THY C . n B 2 14 DA 14 23 23 DA ADE C . n B 2 15 DC 15 24 24 DC CYT C . n B 2 16 DC 16 25 ? ? ? C . n C 3 1 MET 1 1 ? ? ? A . n C 3 2 PRO 2 2 2 PRO PRO A . n C 3 3 GLU 3 3 3 GLU GLU A . n C 3 4 LEU 4 4 4 LEU LEU A . n C 3 5 PRO 5 5 5 PRO PRO A . n C 3 6 GLU 6 6 6 GLU GLU A . n C 3 7 VAL 7 7 7 VAL VAL A . n C 3 8 GLU 8 8 8 GLU GLU A . n C 3 9 THR 9 9 9 THR THR A . n C 3 10 ILE 10 10 10 ILE ILE A . n C 3 11 ARG 11 11 11 ARG ARG A . n C 3 12 ARG 12 12 12 ARG ALA A . n C 3 13 THR 13 13 13 THR THR A . n C 3 14 LEU 14 14 14 LEU LEU A . n C 3 15 LEU 15 15 15 LEU LEU A . n C 3 16 PRO 16 16 16 PRO PRO A . n C 3 17 LEU 17 17 17 LEU LEU A . n C 3 18 ILE 18 18 18 ILE ILE A . n C 3 19 VAL 19 19 19 VAL VAL A . n C 3 20 GLY 20 20 20 GLY GLY A . n C 3 21 LYS 21 21 21 LYS LYS A . n C 3 22 THR 22 22 22 THR THR A . n C 3 23 ILE 23 23 23 ILE ILE A . n C 3 24 GLU 24 24 24 GLU GLU A . n C 3 25 ASP 25 25 25 ASP ASP A . n C 3 26 VAL 26 26 26 VAL VAL A . n C 3 27 ARG 27 27 27 ARG ARG A . n C 3 28 ILE 28 28 28 ILE ILE A . n C 3 29 PHE 29 29 29 PHE PHE A . n C 3 30 TRP 30 30 30 TRP TRP A . n C 3 31 PRO 31 31 31 PRO PRO A . n C 3 32 ASN 32 32 32 ASN ASN A . n C 3 33 ILE 33 33 33 ILE ILE A . n C 3 34 ILE 34 34 34 ILE ILE A . n C 3 35 ARG 35 35 35 ARG ARG A . n C 3 36 HIS 36 36 36 HIS HIS A . n C 3 37 PRO 37 37 37 PRO PRO A . n C 3 38 ARG 38 38 38 ARG GLY A . n C 3 39 ASP 39 39 39 ASP ASP A . n C 3 40 SER 40 40 40 SER SER A . n C 3 41 GLU 41 41 41 GLU ALA A . n C 3 42 ALA 42 42 42 ALA ALA A . n C 3 43 PHE 43 43 43 PHE PHE A . n C 3 44 ALA 44 44 44 ALA ALA A . n C 3 45 ALA 45 45 45 ALA ALA A . n C 3 46 ARG 46 46 46 ARG ARG A . n C 3 47 MET 47 47 47 MET MET A . n C 3 48 ILE 48 48 48 ILE ILE A . n C 3 49 GLY 49 49 49 GLY GLY A . n C 3 50 GLN 50 50 50 GLN GLN A . n C 3 51 THR 51 51 51 THR THR A . n C 3 52 VAL 52 52 52 VAL VAL A . n C 3 53 ARG 53 53 53 ARG ARG A . n C 3 54 GLY 54 54 54 GLY GLY A . n C 3 55 LEU 55 55 55 LEU LEU A . n C 3 56 GLU 56 56 56 GLU GLU A . n C 3 57 ARG 57 57 57 ARG ARG A . n C 3 58 ARG 58 58 58 ARG ARG A . n C 3 59 GLY 59 59 59 GLY GLY A . n C 3 60 LYS 60 60 60 LYS LYS A . n C 3 61 PHE 61 61 61 PHE PHE A . n C 3 62 LEU 62 62 62 LEU LEU A . n C 3 63 LYS 63 63 63 LYS LYS A . n C 3 64 PHE 64 64 64 PHE PHE A . n C 3 65 LEU 65 65 65 LEU LEU A . n C 3 66 LEU 66 66 66 LEU LEU A . n C 3 67 ASP 67 67 67 ASP ASP A . n C 3 68 ARG 68 68 68 ARG ALA A . n C 3 69 ASP 69 69 69 ASP ASP A . n C 3 70 ALA 70 70 70 ALA ALA A . n C 3 71 LEU 71 71 71 LEU LEU A . n C 3 72 ILE 72 72 72 ILE ILE A . n C 3 73 SER 73 73 73 SER SER A . n C 3 74 HIS 74 74 74 HIS HIS A . n C 3 75 LEU 75 75 75 LEU LEU A . n C 3 76 ARG 76 76 76 ARG ARG A . n C 3 77 MET 77 77 77 MET MET A . n C 3 78 GLU 78 78 78 GLU GLU A . n C 3 79 GLY 79 79 79 GLY GLY A . n C 3 80 ARG 80 80 80 ARG ALA A . n C 3 81 TYR 81 81 81 TYR TYR A . n C 3 82 ALA 82 82 82 ALA ALA A . n C 3 83 VAL 83 83 83 VAL VAL A . n C 3 84 ALA 84 84 84 ALA ALA A . n C 3 85 SER 85 85 85 SER SER A . n C 3 86 ALA 86 86 86 ALA ALA A . n C 3 87 LEU 87 87 87 LEU LEU A . n C 3 88 GLU 88 88 88 GLU GLU A . n C 3 89 PRO 89 89 89 PRO PRO A . n C 3 90 LEU 90 90 90 LEU LEU A . n C 3 91 GLU 91 91 91 GLU GLU A . n C 3 92 PRO 92 92 92 PRO PRO A . n C 3 93 HIS 93 93 93 HIS HIS A . n C 3 94 THR 94 94 94 THR THR A . n C 3 95 HIS 95 95 95 HIS HIS A . n C 3 96 VAL 96 96 96 VAL VAL A . n C 3 97 VAL 97 97 97 VAL VAL A . n C 3 98 PHE 98 98 98 PHE PHE A . n C 3 99 CYS 99 99 99 CYS CYS A . n C 3 100 PHE 100 100 100 PHE PHE A . n C 3 101 THR 101 101 101 THR THR A . n C 3 102 ASP 102 102 102 ASP ASP A . n C 3 103 GLY 103 103 103 GLY GLY A . n C 3 104 SER 104 104 104 SER SER A . n C 3 105 GLU 105 105 105 GLU GLU A . n C 3 106 LEU 106 106 106 LEU LEU A . n C 3 107 ARG 107 107 107 ARG ARG A . n C 3 108 TYR 108 108 108 TYR TYR A . n C 3 109 ARG 109 109 109 ARG ARG A . n C 3 110 ASP 110 110 110 ASP ASP A . n C 3 111 VAL 111 111 111 VAL VAL A . n C 3 112 ARG 112 112 112 ARG ARG A . n C 3 113 LYS 113 113 113 LYS LYS A . n C 3 114 PHE 114 114 114 PHE PHE A . n C 3 115 GLY 115 115 115 GLY GLY A . n C 3 116 THR 116 116 116 THR THR A . n C 3 117 MET 117 117 117 MET MET A . n C 3 118 HIS 118 118 118 HIS HIS A . n C 3 119 VAL 119 119 119 VAL VAL A . n C 3 120 TYR 120 120 120 TYR TYR A . n C 3 121 ALA 121 121 121 ALA ALA A . n C 3 122 LYS 122 122 122 LYS LYS A . n C 3 123 GLU 123 123 123 GLU ALA A . n C 3 124 GLU 124 124 124 GLU ALA A . n C 3 125 ALA 125 125 125 ALA ALA A . n C 3 126 ASP 126 126 126 ASP ASP A . n C 3 127 ARG 127 127 127 ARG ALA A . n C 3 128 ARG 128 128 128 ARG ARG A . n C 3 129 PRO 129 129 129 PRO PRO A . n C 3 130 PRO 130 130 130 PRO PRO A . n C 3 131 LEU 131 131 131 LEU LEU A . n C 3 132 ALA 132 132 132 ALA ALA A . n C 3 133 GLU 133 133 133 GLU SER A . n C 3 134 LEU 134 134 134 LEU LEU A . n C 3 135 GLY 135 135 135 GLY GLY A . n C 3 136 PRO 136 136 136 PRO PRO A . n C 3 137 GLU 137 137 137 GLU GLU A . n C 3 138 PRO 138 138 138 PRO PRO A . n C 3 139 LEU 139 139 139 LEU LEU A . n C 3 140 SER 140 140 140 SER SER A . n C 3 141 PRO 141 141 141 PRO PRO A . n C 3 142 ALA 142 142 142 ALA ALA A . n C 3 143 PHE 143 143 143 PHE PHE A . n C 3 144 SER 144 144 144 SER SER A . n C 3 145 PRO 145 145 145 PRO PRO A . n C 3 146 ALA 146 146 146 ALA ALA A . n C 3 147 VAL 147 147 147 VAL ALA A . n C 3 148 LEU 148 148 148 LEU LEU A . n C 3 149 ALA 149 149 149 ALA ALA A . n C 3 150 GLU 150 150 150 GLU ALA A . n C 3 151 ARG 151 151 151 ARG ARG A . n C 3 152 ALA 152 152 152 ALA ALA A . n C 3 153 VAL 153 153 153 VAL ALA A . n C 3 154 LYS 154 154 154 LYS ALA A . n C 3 155 THR 155 155 155 THR THR A . n C 3 156 LYS 156 156 156 LYS SER A . n C 3 157 ARG 157 157 157 ARG ARG A . n C 3 158 SER 158 158 158 SER SER A . n C 3 159 VAL 159 159 159 VAL VAL A . n C 3 160 LYS 160 160 160 LYS LYS A . n C 3 161 ALA 161 161 161 ALA ALA A . n C 3 162 LEU 162 162 162 LEU LEU A . n C 3 163 LEU 163 163 163 LEU LEU A . n C 3 164 LEU 164 164 164 LEU LEU A . n C 3 165 ASP 165 165 165 ASP ASP A . n C 3 166 GLN 166 166 166 GLN GLN A . n C 3 167 THR 167 167 167 THR THR A . n C 3 168 VAL 168 168 168 VAL VAL A . n C 3 169 VAL 169 169 169 VAL VAL A . n C 3 170 ALA 170 170 170 ALA ALA A . n C 3 171 GLY 171 171 171 GLY GLY A . n C 3 172 PHE 172 172 172 PHE PHE A . n C 3 173 GLY 173 173 173 GLY GLY A . n C 3 174 ASN 174 174 174 ASN ASN A . n C 3 175 ILE 175 175 175 ILE ILE A . n C 3 176 TYR 176 176 176 TYR TYR A . n C 3 177 VAL 177 177 177 VAL VAL A . n C 3 178 ASP 178 178 178 ASP ASP A . n C 3 179 GLU 179 179 179 GLU GLU A . n C 3 180 SER 180 180 180 SER SER A . n C 3 181 LEU 181 181 181 LEU LEU A . n C 3 182 PHE 182 182 182 PHE PHE A . n C 3 183 ARG 183 183 183 ARG ARG A . n C 3 184 ALA 184 184 184 ALA ALA A . n C 3 185 GLY 185 185 185 GLY GLY A . n C 3 186 ILE 186 186 186 ILE ILE A . n C 3 187 LEU 187 187 187 LEU LEU A . n C 3 188 PRO 188 188 188 PRO PRO A . n C 3 189 GLY 189 189 189 GLY GLY A . n C 3 190 ARG 190 190 190 ARG ARG A . n C 3 191 PRO 191 191 191 PRO PRO A . n C 3 192 ALA 192 192 192 ALA ALA A . n C 3 193 ALA 193 193 193 ALA ALA A . n C 3 194 SER 194 194 194 SER SER A . n C 3 195 LEU 195 195 195 LEU LEU A . n C 3 196 SER 196 196 196 SER SER A . n C 3 197 SER 197 197 197 SER ALA A . n C 3 198 LYS 198 198 198 LYS ALA A . n C 3 199 GLU 199 199 199 GLU GLU A . n C 3 200 ILE 200 200 200 ILE ILE A . n C 3 201 GLU 201 201 201 GLU ALA A . n C 3 202 ARG 202 202 202 ARG ARG A . n C 3 203 LEU 203 203 203 LEU LEU A . n C 3 204 HIS 204 204 204 HIS HIS A . n C 3 205 GLU 205 205 205 GLU SER A . n C 3 206 GLU 206 206 206 GLU GLU A . n C 3 207 MET 207 207 207 MET MET A . n C 3 208 VAL 208 208 208 VAL VAL A . n C 3 209 ALA 209 209 209 ALA ALA A . n C 3 210 THR 210 210 210 THR THR A . n C 3 211 ILE 211 211 211 ILE ILE A . n C 3 212 GLY 212 212 212 GLY GLY A . n C 3 213 GLU 213 213 213 GLU GLU A . n C 3 214 ALA 214 214 214 ALA ALA A . n C 3 215 VAL 215 215 215 VAL VAL A . n C 3 216 MET 216 216 216 MET ALA A . n C 3 217 LYS 217 217 217 LYS SER A . n C 3 218 GLY 218 218 218 GLY GLY A . n C 3 219 GLY 219 219 219 GLY GLY A . n C 3 220 SER 220 220 220 SER SER A . n C 3 221 THR 221 221 ? ? ? A . n C 3 222 VAL 222 222 ? ? ? A . n C 3 223 ARG 223 223 ? ? ? A . n C 3 224 THR 224 224 ? ? ? A . n C 3 225 TYR 225 225 ? ? ? A . n C 3 226 VAL 226 226 ? ? ? A . n C 3 227 ASN 227 227 ? ? ? A . n C 3 228 THR 228 228 ? ? ? A . n C 3 229 GLN 229 229 ? ? ? A . n C 3 230 GLY 230 230 ? ? ? A . n C 3 231 GLU 231 231 ? ? ? A . n C 3 232 ALA 232 232 ? ? ? A . n C 3 233 GLY 233 233 ? ? ? A . n C 3 234 THR 234 234 ? ? ? A . n C 3 235 PHE 235 235 235 PHE PHE A . n C 3 236 GLN 236 236 236 GLN GLN A . n C 3 237 HIS 237 237 237 HIS HIS A . n C 3 238 HIS 238 238 238 HIS HIS A . n C 3 239 LEU 239 239 239 LEU LEU A . n C 3 240 TYR 240 240 240 TYR TYR A . n C 3 241 VAL 241 241 241 VAL VAL A . n C 3 242 TYR 242 242 242 TYR TYR A . n C 3 243 GLY 243 243 243 GLY GLY A . n C 3 244 ARG 244 244 244 ARG ARG A . n C 3 245 GLN 245 245 245 GLN GLN A . n C 3 246 GLY 246 246 246 GLY GLY A . n C 3 247 ASN 247 247 247 ASN ASN A . n C 3 248 PRO 248 248 248 PRO PRO A . n C 3 249 CYS 249 249 249 CYS CYS A . n C 3 250 LYS 250 250 250 LYS LYS A . n C 3 251 ARG 251 251 251 ARG ARG A . n C 3 252 CYS 252 252 252 CYS CYS A . n C 3 253 GLY 253 253 253 GLY GLY A . n C 3 254 THR 254 254 254 THR THR A . n C 3 255 PRO 255 255 255 PRO PRO A . n C 3 256 ILE 256 256 256 ILE ILE A . n C 3 257 GLU 257 257 257 GLU GLU A . n C 3 258 LYS 258 258 258 LYS LYS A . n C 3 259 THR 259 259 259 THR THR A . n C 3 260 VAL 260 260 260 VAL VAL A . n C 3 261 VAL 261 261 261 VAL VAL A . n C 3 262 ALA 262 262 262 ALA ALA A . n C 3 263 GLY 263 263 263 GLY GLY A . n C 3 264 ARG 264 264 264 ARG ARG A . n C 3 265 GLY 265 265 265 GLY GLY A . n C 3 266 THR 266 266 266 THR THR A . n C 3 267 HIS 267 267 267 HIS HIS A . n C 3 268 TYR 268 268 268 TYR TYR A . n C 3 269 CYS 269 269 269 CYS CYS A . n C 3 270 PRO 270 270 270 PRO PRO A . n C 3 271 ARG 271 271 271 ARG ARG A . n C 3 272 CYS 272 272 272 CYS CYS A . n C 3 273 GLN 273 273 273 GLN GLN A . n C 3 274 ARG 274 274 274 ARG ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN 1 300 300 ZN ZN A . E 5 HOH 1 83 83 HOH HOH B . E 5 HOH 2 112 112 HOH HOH B . E 5 HOH 3 123 123 HOH HOH B . E 5 HOH 4 127 127 HOH HOH B . E 5 HOH 5 143 143 HOH HOH B . E 5 HOH 6 175 175 HOH HOH B . E 5 HOH 7 177 177 HOH HOH B . F 5 HOH 1 30 30 HOH HOH C . F 5 HOH 2 43 43 HOH HOH C . F 5 HOH 3 54 54 HOH HOH C . F 5 HOH 4 86 86 HOH HOH C . F 5 HOH 5 115 115 HOH HOH C . F 5 HOH 6 117 117 HOH HOH C . F 5 HOH 7 181 181 HOH HOH C . G 5 HOH 1 301 1 HOH HOH A . G 5 HOH 2 302 2 HOH HOH A . G 5 HOH 3 303 3 HOH HOH A . G 5 HOH 4 304 4 HOH HOH A . G 5 HOH 5 305 5 HOH HOH A . G 5 HOH 6 306 6 HOH HOH A . G 5 HOH 7 307 7 HOH HOH A . G 5 HOH 8 308 8 HOH HOH A . G 5 HOH 9 309 9 HOH HOH A . G 5 HOH 10 310 10 HOH HOH A . G 5 HOH 11 311 11 HOH HOH A . G 5 HOH 12 312 12 HOH HOH A . G 5 HOH 13 313 13 HOH HOH A . G 5 HOH 14 314 14 HOH HOH A . G 5 HOH 15 315 15 HOH HOH A . G 5 HOH 16 316 16 HOH HOH A . G 5 HOH 17 317 17 HOH HOH A . G 5 HOH 18 318 18 HOH HOH A . G 5 HOH 19 319 19 HOH HOH A . G 5 HOH 20 320 20 HOH HOH A . G 5 HOH 21 321 21 HOH HOH A . G 5 HOH 22 322 22 HOH HOH A . G 5 HOH 23 323 23 HOH HOH A . G 5 HOH 24 324 24 HOH HOH A . G 5 HOH 25 325 25 HOH HOH A . G 5 HOH 26 326 26 HOH HOH A . G 5 HOH 27 327 27 HOH HOH A . G 5 HOH 28 328 28 HOH HOH A . G 5 HOH 29 329 29 HOH HOH A . G 5 HOH 30 330 31 HOH HOH A . G 5 HOH 31 331 32 HOH HOH A . G 5 HOH 32 332 33 HOH HOH A . G 5 HOH 33 333 34 HOH HOH A . G 5 HOH 34 334 35 HOH HOH A . G 5 HOH 35 335 36 HOH HOH A . G 5 HOH 36 336 37 HOH HOH A . G 5 HOH 37 337 38 HOH HOH A . G 5 HOH 38 338 39 HOH HOH A . G 5 HOH 39 339 40 HOH HOH A . G 5 HOH 40 340 41 HOH HOH A . G 5 HOH 41 341 42 HOH HOH A . G 5 HOH 42 342 44 HOH HOH A . G 5 HOH 43 343 45 HOH HOH A . G 5 HOH 44 344 46 HOH HOH A . G 5 HOH 45 345 47 HOH HOH A . G 5 HOH 46 346 48 HOH HOH A . G 5 HOH 47 347 49 HOH HOH A . G 5 HOH 48 348 50 HOH HOH A . G 5 HOH 49 349 51 HOH HOH A . G 5 HOH 50 350 52 HOH HOH A . G 5 HOH 51 351 53 HOH HOH A . G 5 HOH 52 352 55 HOH HOH A . G 5 HOH 53 353 56 HOH HOH A . G 5 HOH 54 354 57 HOH HOH A . G 5 HOH 55 355 58 HOH HOH A . G 5 HOH 56 356 59 HOH HOH A . G 5 HOH 57 357 60 HOH HOH A . G 5 HOH 58 358 61 HOH HOH A . G 5 HOH 59 359 62 HOH HOH A . G 5 HOH 60 360 63 HOH HOH A . G 5 HOH 61 361 64 HOH HOH A . G 5 HOH 62 362 65 HOH HOH A . G 5 HOH 63 363 66 HOH HOH A . G 5 HOH 64 364 67 HOH HOH A . G 5 HOH 65 365 68 HOH HOH A . G 5 HOH 66 366 69 HOH HOH A . G 5 HOH 67 367 70 HOH HOH A . G 5 HOH 68 368 71 HOH HOH A . G 5 HOH 69 369 72 HOH HOH A . G 5 HOH 70 370 73 HOH HOH A . G 5 HOH 71 371 74 HOH HOH A . G 5 HOH 72 372 75 HOH HOH A . G 5 HOH 73 373 76 HOH HOH A . G 5 HOH 74 374 77 HOH HOH A . G 5 HOH 75 375 78 HOH HOH A . G 5 HOH 76 376 79 HOH HOH A . G 5 HOH 77 377 80 HOH HOH A . G 5 HOH 78 378 81 HOH HOH A . G 5 HOH 79 379 82 HOH HOH A . G 5 HOH 80 380 84 HOH HOH A . G 5 HOH 81 381 85 HOH HOH A . G 5 HOH 82 382 87 HOH HOH A . G 5 HOH 83 383 88 HOH HOH A . G 5 HOH 84 384 89 HOH HOH A . G 5 HOH 85 385 90 HOH HOH A . G 5 HOH 86 386 91 HOH HOH A . G 5 HOH 87 387 92 HOH HOH A . G 5 HOH 88 388 93 HOH HOH A . G 5 HOH 89 389 94 HOH HOH A . G 5 HOH 90 390 95 HOH HOH A . G 5 HOH 91 391 96 HOH HOH A . G 5 HOH 92 392 97 HOH HOH A . G 5 HOH 93 393 98 HOH HOH A . G 5 HOH 94 394 99 HOH HOH A . G 5 HOH 95 395 100 HOH HOH A . G 5 HOH 96 396 101 HOH HOH A . G 5 HOH 97 397 102 HOH HOH A . G 5 HOH 98 398 103 HOH HOH A . G 5 HOH 99 399 104 HOH HOH A . G 5 HOH 100 400 105 HOH HOH A . G 5 HOH 101 401 106 HOH HOH A . G 5 HOH 102 402 107 HOH HOH A . G 5 HOH 103 403 108 HOH HOH A . G 5 HOH 104 404 109 HOH HOH A . G 5 HOH 105 405 110 HOH HOH A . G 5 HOH 106 406 111 HOH HOH A . G 5 HOH 107 407 113 HOH HOH A . G 5 HOH 108 408 114 HOH HOH A . G 5 HOH 109 409 116 HOH HOH A . G 5 HOH 110 410 118 HOH HOH A . G 5 HOH 111 411 119 HOH HOH A . G 5 HOH 112 412 120 HOH HOH A . G 5 HOH 113 413 121 HOH HOH A . G 5 HOH 114 414 122 HOH HOH A . G 5 HOH 115 415 124 HOH HOH A . G 5 HOH 116 416 125 HOH HOH A . G 5 HOH 117 417 126 HOH HOH A . G 5 HOH 118 418 128 HOH HOH A . G 5 HOH 119 419 129 HOH HOH A . G 5 HOH 120 420 130 HOH HOH A . G 5 HOH 121 421 131 HOH HOH A . G 5 HOH 122 422 132 HOH HOH A . G 5 HOH 123 423 133 HOH HOH A . G 5 HOH 124 424 134 HOH HOH A . G 5 HOH 125 425 135 HOH HOH A . G 5 HOH 126 426 136 HOH HOH A . G 5 HOH 127 427 137 HOH HOH A . G 5 HOH 128 428 138 HOH HOH A . G 5 HOH 129 429 139 HOH HOH A . G 5 HOH 130 430 140 HOH HOH A . G 5 HOH 131 431 141 HOH HOH A . G 5 HOH 132 432 142 HOH HOH A . G 5 HOH 133 433 144 HOH HOH A . G 5 HOH 134 434 145 HOH HOH A . G 5 HOH 135 435 146 HOH HOH A . G 5 HOH 136 436 147 HOH HOH A . G 5 HOH 137 437 148 HOH HOH A . G 5 HOH 138 438 149 HOH HOH A . G 5 HOH 139 439 150 HOH HOH A . G 5 HOH 140 440 151 HOH HOH A . G 5 HOH 141 441 152 HOH HOH A . G 5 HOH 142 442 153 HOH HOH A . G 5 HOH 143 443 154 HOH HOH A . G 5 HOH 144 444 155 HOH HOH A . G 5 HOH 145 445 156 HOH HOH A . G 5 HOH 146 446 157 HOH HOH A . G 5 HOH 147 447 158 HOH HOH A . G 5 HOH 148 448 159 HOH HOH A . G 5 HOH 149 449 160 HOH HOH A . G 5 HOH 150 450 161 HOH HOH A . G 5 HOH 151 451 162 HOH HOH A . G 5 HOH 152 452 163 HOH HOH A . G 5 HOH 153 453 164 HOH HOH A . G 5 HOH 154 454 165 HOH HOH A . G 5 HOH 155 455 166 HOH HOH A . G 5 HOH 156 456 167 HOH HOH A . G 5 HOH 157 457 168 HOH HOH A . G 5 HOH 158 458 169 HOH HOH A . G 5 HOH 159 459 170 HOH HOH A . G 5 HOH 160 460 171 HOH HOH A . G 5 HOH 161 461 172 HOH HOH A . G 5 HOH 162 462 173 HOH HOH A . G 5 HOH 163 463 174 HOH HOH A . G 5 HOH 164 464 176 HOH HOH A . G 5 HOH 165 465 178 HOH HOH A . G 5 HOH 166 466 179 HOH HOH A . G 5 HOH 167 467 180 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? C CYS 249 ? A CYS 249 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? C CYS 252 ? A CYS 252 ? 1_555 109.3 ? 2 SG ? C CYS 249 ? A CYS 249 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? C CYS 269 ? A CYS 269 ? 1_555 108.8 ? 3 SG ? C CYS 252 ? A CYS 252 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? C CYS 269 ? A CYS 269 ? 1_555 97.2 ? 4 SG ? C CYS 249 ? A CYS 249 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? C CYS 272 ? A CYS 272 ? 1_555 107.4 ? 5 SG ? C CYS 252 ? A CYS 252 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? C CYS 272 ? A CYS 272 ? 1_555 114.8 ? 6 SG ? C CYS 269 ? A CYS 269 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? C CYS 272 ? A CYS 272 ? 1_555 118.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-06-14 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_sheet 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.value' 8 4 'Structure model' '_struct_conn.pdbx_dist_value' 9 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 10 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 11 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 14 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 15 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 16 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 17 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 19 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 20 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 21 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 22 4 'Structure model' '_struct_sheet.number_strands' 23 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 24 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 25 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement . ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TRP A 30 ? ? -151.46 87.27 2 1 LEU A 66 ? ? -105.68 -148.67 3 1 ARG A 76 ? ? 53.61 -121.37 4 1 ASP A 110 ? ? -166.27 93.07 5 1 GLU A 133 ? ? -97.22 31.69 6 1 LYS A 154 ? ? -168.79 2.61 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B DG 1 ? P ? A DG 3 P 2 1 Y 1 B DG 1 ? OP1 ? A DG 3 OP1 3 1 Y 1 B DG 1 ? OP2 ? A DG 3 OP2 4 1 Y 1 C DG 13 ? P ? B DG 4 P 5 1 Y 1 C DG 13 ? OP1 ? B DG 4 OP1 6 1 Y 1 C DG 13 ? OP2 ? B DG 4 OP2 7 1 Y 1 A ARG 12 ? CG ? C ARG 12 CG 8 1 Y 1 A ARG 12 ? CD ? C ARG 12 CD 9 1 Y 1 A ARG 12 ? NE ? C ARG 12 NE 10 1 Y 1 A ARG 12 ? CZ ? C ARG 12 CZ 11 1 Y 1 A ARG 12 ? NH1 ? C ARG 12 NH1 12 1 Y 1 A ARG 12 ? NH2 ? C ARG 12 NH2 13 1 Y 1 A ARG 38 ? CB ? C ARG 38 CB 14 1 Y 1 A ARG 38 ? CG ? C ARG 38 CG 15 1 Y 1 A ARG 38 ? CD ? C ARG 38 CD 16 1 Y 1 A ARG 38 ? NE ? C ARG 38 NE 17 1 Y 1 A ARG 38 ? CZ ? C ARG 38 CZ 18 1 Y 1 A ARG 38 ? NH1 ? C ARG 38 NH1 19 1 Y 1 A ARG 38 ? NH2 ? C ARG 38 NH2 20 1 Y 1 A GLU 41 ? CG ? C GLU 41 CG 21 1 Y 1 A GLU 41 ? CD ? C GLU 41 CD 22 1 Y 1 A GLU 41 ? OE1 ? C GLU 41 OE1 23 1 Y 1 A GLU 41 ? OE2 ? C GLU 41 OE2 24 1 Y 1 A ARG 68 ? CG ? C ARG 68 CG 25 1 Y 1 A ARG 68 ? CD ? C ARG 68 CD 26 1 Y 1 A ARG 68 ? NE ? C ARG 68 NE 27 1 Y 1 A ARG 68 ? CZ ? C ARG 68 CZ 28 1 Y 1 A ARG 68 ? NH1 ? C ARG 68 NH1 29 1 Y 1 A ARG 68 ? NH2 ? C ARG 68 NH2 30 1 Y 1 A ARG 80 ? CG ? C ARG 80 CG 31 1 Y 1 A ARG 80 ? CD ? C ARG 80 CD 32 1 Y 1 A ARG 80 ? NE ? C ARG 80 NE 33 1 Y 1 A ARG 80 ? CZ ? C ARG 80 CZ 34 1 Y 1 A ARG 80 ? NH1 ? C ARG 80 NH1 35 1 Y 1 A ARG 80 ? NH2 ? C ARG 80 NH2 36 1 Y 1 A GLU 123 ? CG ? C GLU 123 CG 37 1 Y 1 A GLU 123 ? CD ? C GLU 123 CD 38 1 Y 1 A GLU 123 ? OE1 ? C GLU 123 OE1 39 1 Y 1 A GLU 123 ? OE2 ? C GLU 123 OE2 40 1 Y 1 A GLU 124 ? CG ? C GLU 124 CG 41 1 Y 1 A GLU 124 ? CD ? C GLU 124 CD 42 1 Y 1 A GLU 124 ? OE1 ? C GLU 124 OE1 43 1 Y 1 A GLU 124 ? OE2 ? C GLU 124 OE2 44 1 Y 1 A ARG 127 ? CG ? C ARG 127 CG 45 1 Y 1 A ARG 127 ? CD ? C ARG 127 CD 46 1 Y 1 A ARG 127 ? NE ? C ARG 127 NE 47 1 Y 1 A ARG 127 ? CZ ? C ARG 127 CZ 48 1 Y 1 A ARG 127 ? NH1 ? C ARG 127 NH1 49 1 Y 1 A ARG 127 ? NH2 ? C ARG 127 NH2 50 1 Y 1 A GLU 133 ? CD ? C GLU 133 CD 51 1 Y 1 A GLU 133 ? OE1 ? C GLU 133 OE1 52 1 Y 1 A GLU 133 ? OE2 ? C GLU 133 OE2 53 1 Y 1 A VAL 147 ? CG1 ? C VAL 147 CG1 54 1 Y 1 A VAL 147 ? CG2 ? C VAL 147 CG2 55 1 Y 1 A GLU 150 ? CG ? C GLU 150 CG 56 1 Y 1 A GLU 150 ? CD ? C GLU 150 CD 57 1 Y 1 A GLU 150 ? OE1 ? C GLU 150 OE1 58 1 Y 1 A GLU 150 ? OE2 ? C GLU 150 OE2 59 1 Y 1 A VAL 153 ? CG1 ? C VAL 153 CG1 60 1 Y 1 A VAL 153 ? CG2 ? C VAL 153 CG2 61 1 Y 1 A LYS 154 ? CG ? C LYS 154 CG 62 1 Y 1 A LYS 154 ? CD ? C LYS 154 CD 63 1 Y 1 A LYS 154 ? CE ? C LYS 154 CE 64 1 Y 1 A LYS 154 ? NZ ? C LYS 154 NZ 65 1 Y 1 A LYS 156 ? CD ? C LYS 156 CD 66 1 Y 1 A LYS 156 ? CE ? C LYS 156 CE 67 1 Y 1 A LYS 156 ? NZ ? C LYS 156 NZ 68 1 Y 1 A SER 197 ? OG ? C SER 197 OG 69 1 Y 1 A LYS 198 ? CG ? C LYS 198 CG 70 1 Y 1 A LYS 198 ? CD ? C LYS 198 CD 71 1 Y 1 A LYS 198 ? CE ? C LYS 198 CE 72 1 Y 1 A LYS 198 ? NZ ? C LYS 198 NZ 73 1 Y 1 A GLU 201 ? CG ? C GLU 201 CG 74 1 Y 1 A GLU 201 ? CD ? C GLU 201 CD 75 1 Y 1 A GLU 201 ? OE1 ? C GLU 201 OE1 76 1 Y 1 A GLU 201 ? OE2 ? C GLU 201 OE2 77 1 Y 1 A GLU 205 ? CD ? C GLU 205 CD 78 1 Y 1 A GLU 205 ? OE1 ? C GLU 205 OE1 79 1 Y 1 A GLU 205 ? OE2 ? C GLU 205 OE2 80 1 Y 1 A MET 216 ? CG ? C MET 216 CG 81 1 Y 1 A MET 216 ? SD ? C MET 216 SD 82 1 Y 1 A MET 216 ? CE ? C MET 216 CE 83 1 Y 1 A LYS 217 ? CD ? C LYS 217 CD 84 1 Y 1 A LYS 217 ? CE ? C LYS 217 CE 85 1 Y 1 A LYS 217 ? NZ ? C LYS 217 NZ 86 1 Y 1 A ARG 274 ? CG ? C ARG 274 CG 87 1 Y 1 A ARG 274 ? CD ? C ARG 274 CD 88 1 Y 1 A ARG 274 ? NE ? C ARG 274 NE 89 1 Y 1 A ARG 274 ? CZ ? C ARG 274 CZ 90 1 Y 1 A ARG 274 ? NH1 ? C ARG 274 NH1 91 1 Y 1 A ARG 274 ? NH2 ? C ARG 274 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B DA -1 ? A DA 1 2 1 Y 1 B DG 0 ? A DG 2 3 1 Y 1 B DG 13 ? A DG 15 4 1 Y 1 B DC 14 ? A DC 16 5 1 Y 1 C DT 10 ? B DT 1 6 1 Y 1 C DG 11 ? B DG 2 7 1 Y 1 C DC 12 ? B DC 3 8 1 Y 1 C DC 25 ? B DC 16 9 1 Y 1 A MET 1 ? C MET 1 10 1 Y 1 A THR 221 ? C THR 221 11 1 Y 1 A VAL 222 ? C VAL 222 12 1 Y 1 A ARG 223 ? C ARG 223 13 1 Y 1 A THR 224 ? C THR 224 14 1 Y 1 A TYR 225 ? C TYR 225 15 1 Y 1 A VAL 226 ? C VAL 226 16 1 Y 1 A ASN 227 ? C ASN 227 17 1 Y 1 A THR 228 ? C THR 228 18 1 Y 1 A GLN 229 ? C GLN 229 19 1 Y 1 A GLY 230 ? C GLY 230 20 1 Y 1 A GLU 231 ? C GLU 231 21 1 Y 1 A ALA 232 ? C ALA 232 22 1 Y 1 A GLY 233 ? C GLY 233 23 1 Y 1 A THR 234 ? C THR 234 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 HPD P P N N 304 HPD "O5'" O N N 305 HPD O1P O N N 306 HPD O2P O N N 307 HPD O3P O N N 308 HPD "C5'" C N N 309 HPD "O4'" O N N 310 HPD "O3'" O N N 311 HPD "C1'" C N N 312 HPD "O1'" O N N 313 HPD "C3'" C N S 314 HPD "C4'" C N R 315 HPD "C2'" C N N 316 HPD HOP2 H N N 317 HPD HOP3 H N N 318 HPD "H5'1" H N N 319 HPD "H5'2" H N N 320 HPD "HO'4" H N N 321 HPD "HO'3" H N N 322 HPD "H1'1" H N N 323 HPD "H1'2" H N N 324 HPD "HO'1" H N N 325 HPD "H3'" H N N 326 HPD "H4'" H N N 327 HPD "H2'1" H N N 328 HPD "H2'2" H N N 329 ILE N N N N 330 ILE CA C N S 331 ILE C C N N 332 ILE O O N N 333 ILE CB C N S 334 ILE CG1 C N N 335 ILE CG2 C N N 336 ILE CD1 C N N 337 ILE OXT O N N 338 ILE H H N N 339 ILE H2 H N N 340 ILE HA H N N 341 ILE HB H N N 342 ILE HG12 H N N 343 ILE HG13 H N N 344 ILE HG21 H N N 345 ILE HG22 H N N 346 ILE HG23 H N N 347 ILE HD11 H N N 348 ILE HD12 H N N 349 ILE HD13 H N N 350 ILE HXT H N N 351 LEU N N N N 352 LEU CA C N S 353 LEU C C N N 354 LEU O O N N 355 LEU CB C N N 356 LEU CG C N N 357 LEU CD1 C N N 358 LEU CD2 C N N 359 LEU OXT O N N 360 LEU H H N N 361 LEU H2 H N N 362 LEU HA H N N 363 LEU HB2 H N N 364 LEU HB3 H N N 365 LEU HG H N N 366 LEU HD11 H N N 367 LEU HD12 H N N 368 LEU HD13 H N N 369 LEU HD21 H N N 370 LEU HD22 H N N 371 LEU HD23 H N N 372 LEU HXT H N N 373 LYS N N N N 374 LYS CA C N S 375 LYS C C N N 376 LYS O O N N 377 LYS CB C N N 378 LYS CG C N N 379 LYS CD C N N 380 LYS CE C N N 381 LYS NZ N N N 382 LYS OXT O N N 383 LYS H H N N 384 LYS H2 H N N 385 LYS HA H N N 386 LYS HB2 H N N 387 LYS HB3 H N N 388 LYS HG2 H N N 389 LYS HG3 H N N 390 LYS HD2 H N N 391 LYS HD3 H N N 392 LYS HE2 H N N 393 LYS HE3 H N N 394 LYS HZ1 H N N 395 LYS HZ2 H N N 396 LYS HZ3 H N N 397 LYS HXT H N N 398 MET N N N N 399 MET CA C N S 400 MET C C N N 401 MET O O N N 402 MET CB C N N 403 MET CG C N N 404 MET SD S N N 405 MET CE C N N 406 MET OXT O N N 407 MET H H N N 408 MET H2 H N N 409 MET HA H N N 410 MET HB2 H N N 411 MET HB3 H N N 412 MET HG2 H N N 413 MET HG3 H N N 414 MET HE1 H N N 415 MET HE2 H N N 416 MET HE3 H N N 417 MET HXT H N N 418 PHE N N N N 419 PHE CA C N S 420 PHE C C N N 421 PHE O O N N 422 PHE CB C N N 423 PHE CG C Y N 424 PHE CD1 C Y N 425 PHE CD2 C Y N 426 PHE CE1 C Y N 427 PHE CE2 C Y N 428 PHE CZ C Y N 429 PHE OXT O N N 430 PHE H H N N 431 PHE H2 H N N 432 PHE HA H N N 433 PHE HB2 H N N 434 PHE HB3 H N N 435 PHE HD1 H N N 436 PHE HD2 H N N 437 PHE HE1 H N N 438 PHE HE2 H N N 439 PHE HZ H N N 440 PHE HXT H N N 441 PRO N N N N 442 PRO CA C N S 443 PRO C C N N 444 PRO O O N N 445 PRO CB C N N 446 PRO CG C N N 447 PRO CD C N N 448 PRO OXT O N N 449 PRO H H N N 450 PRO HA H N N 451 PRO HB2 H N N 452 PRO HB3 H N N 453 PRO HG2 H N N 454 PRO HG3 H N N 455 PRO HD2 H N N 456 PRO HD3 H N N 457 PRO HXT H N N 458 SER N N N N 459 SER CA C N S 460 SER C C N N 461 SER O O N N 462 SER CB C N N 463 SER OG O N N 464 SER OXT O N N 465 SER H H N N 466 SER H2 H N N 467 SER HA H N N 468 SER HB2 H N N 469 SER HB3 H N N 470 SER HG H N N 471 SER HXT H N N 472 THR N N N N 473 THR CA C N S 474 THR C C N N 475 THR O O N N 476 THR CB C N R 477 THR OG1 O N N 478 THR CG2 C N N 479 THR OXT O N N 480 THR H H N N 481 THR H2 H N N 482 THR HA H N N 483 THR HB H N N 484 THR HG1 H N N 485 THR HG21 H N N 486 THR HG22 H N N 487 THR HG23 H N N 488 THR HXT H N N 489 TRP N N N N 490 TRP CA C N S 491 TRP C C N N 492 TRP O O N N 493 TRP CB C N N 494 TRP CG C Y N 495 TRP CD1 C Y N 496 TRP CD2 C Y N 497 TRP NE1 N Y N 498 TRP CE2 C Y N 499 TRP CE3 C Y N 500 TRP CZ2 C Y N 501 TRP CZ3 C Y N 502 TRP CH2 C Y N 503 TRP OXT O N N 504 TRP H H N N 505 TRP H2 H N N 506 TRP HA H N N 507 TRP HB2 H N N 508 TRP HB3 H N N 509 TRP HD1 H N N 510 TRP HE1 H N N 511 TRP HE3 H N N 512 TRP HZ2 H N N 513 TRP HZ3 H N N 514 TRP HH2 H N N 515 TRP HXT H N N 516 TYR N N N N 517 TYR CA C N S 518 TYR C C N N 519 TYR O O N N 520 TYR CB C N N 521 TYR CG C Y N 522 TYR CD1 C Y N 523 TYR CD2 C Y N 524 TYR CE1 C Y N 525 TYR CE2 C Y N 526 TYR CZ C Y N 527 TYR OH O N N 528 TYR OXT O N N 529 TYR H H N N 530 TYR H2 H N N 531 TYR HA H N N 532 TYR HB2 H N N 533 TYR HB3 H N N 534 TYR HD1 H N N 535 TYR HD2 H N N 536 TYR HE1 H N N 537 TYR HE2 H N N 538 TYR HH H N N 539 TYR HXT H N N 540 VAL N N N N 541 VAL CA C N S 542 VAL C C N N 543 VAL O O N N 544 VAL CB C N N 545 VAL CG1 C N N 546 VAL CG2 C N N 547 VAL OXT O N N 548 VAL H H N N 549 VAL H2 H N N 550 VAL HA H N N 551 VAL HB H N N 552 VAL HG11 H N N 553 VAL HG12 H N N 554 VAL HG13 H N N 555 VAL HG21 H N N 556 VAL HG22 H N N 557 VAL HG23 H N N 558 VAL HXT H N N 559 ZN ZN ZN N N 560 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 HPD P "O5'" sing N N 301 HPD P O1P doub N N 302 HPD P O2P sing N N 303 HPD P O3P sing N N 304 HPD "O5'" "C5'" sing N N 305 HPD O2P HOP2 sing N N 306 HPD O3P HOP3 sing N N 307 HPD "C5'" "C4'" sing N N 308 HPD "C5'" "H5'1" sing N N 309 HPD "C5'" "H5'2" sing N N 310 HPD "O4'" "C4'" sing N N 311 HPD "O4'" "HO'4" sing N N 312 HPD "O3'" "C3'" sing N N 313 HPD "O3'" "HO'3" sing N N 314 HPD "C1'" "O1'" sing N N 315 HPD "C1'" "C2'" sing N N 316 HPD "C1'" "H1'1" sing N N 317 HPD "C1'" "H1'2" sing N N 318 HPD "O1'" "HO'1" sing N N 319 HPD "C3'" "C4'" sing N N 320 HPD "C3'" "C2'" sing N N 321 HPD "C3'" "H3'" sing N N 322 HPD "C4'" "H4'" sing N N 323 HPD "C2'" "H2'1" sing N N 324 HPD "C2'" "H2'2" sing N N 325 ILE N CA sing N N 326 ILE N H sing N N 327 ILE N H2 sing N N 328 ILE CA C sing N N 329 ILE CA CB sing N N 330 ILE CA HA sing N N 331 ILE C O doub N N 332 ILE C OXT sing N N 333 ILE CB CG1 sing N N 334 ILE CB CG2 sing N N 335 ILE CB HB sing N N 336 ILE CG1 CD1 sing N N 337 ILE CG1 HG12 sing N N 338 ILE CG1 HG13 sing N N 339 ILE CG2 HG21 sing N N 340 ILE CG2 HG22 sing N N 341 ILE CG2 HG23 sing N N 342 ILE CD1 HD11 sing N N 343 ILE CD1 HD12 sing N N 344 ILE CD1 HD13 sing N N 345 ILE OXT HXT sing N N 346 LEU N CA sing N N 347 LEU N H sing N N 348 LEU N H2 sing N N 349 LEU CA C sing N N 350 LEU CA CB sing N N 351 LEU CA HA sing N N 352 LEU C O doub N N 353 LEU C OXT sing N N 354 LEU CB CG sing N N 355 LEU CB HB2 sing N N 356 LEU CB HB3 sing N N 357 LEU CG CD1 sing N N 358 LEU CG CD2 sing N N 359 LEU CG HG sing N N 360 LEU CD1 HD11 sing N N 361 LEU CD1 HD12 sing N N 362 LEU CD1 HD13 sing N N 363 LEU CD2 HD21 sing N N 364 LEU CD2 HD22 sing N N 365 LEU CD2 HD23 sing N N 366 LEU OXT HXT sing N N 367 LYS N CA sing N N 368 LYS N H sing N N 369 LYS N H2 sing N N 370 LYS CA C sing N N 371 LYS CA CB sing N N 372 LYS CA HA sing N N 373 LYS C O doub N N 374 LYS C OXT sing N N 375 LYS CB CG sing N N 376 LYS CB HB2 sing N N 377 LYS CB HB3 sing N N 378 LYS CG CD sing N N 379 LYS CG HG2 sing N N 380 LYS CG HG3 sing N N 381 LYS CD CE sing N N 382 LYS CD HD2 sing N N 383 LYS CD HD3 sing N N 384 LYS CE NZ sing N N 385 LYS CE HE2 sing N N 386 LYS CE HE3 sing N N 387 LYS NZ HZ1 sing N N 388 LYS NZ HZ2 sing N N 389 LYS NZ HZ3 sing N N 390 LYS OXT HXT sing N N 391 MET N CA sing N N 392 MET N H sing N N 393 MET N H2 sing N N 394 MET CA C sing N N 395 MET CA CB sing N N 396 MET CA HA sing N N 397 MET C O doub N N 398 MET C OXT sing N N 399 MET CB CG sing N N 400 MET CB HB2 sing N N 401 MET CB HB3 sing N N 402 MET CG SD sing N N 403 MET CG HG2 sing N N 404 MET CG HG3 sing N N 405 MET SD CE sing N N 406 MET CE HE1 sing N N 407 MET CE HE2 sing N N 408 MET CE HE3 sing N N 409 MET OXT HXT sing N N 410 PHE N CA sing N N 411 PHE N H sing N N 412 PHE N H2 sing N N 413 PHE CA C sing N N 414 PHE CA CB sing N N 415 PHE CA HA sing N N 416 PHE C O doub N N 417 PHE C OXT sing N N 418 PHE CB CG sing N N 419 PHE CB HB2 sing N N 420 PHE CB HB3 sing N N 421 PHE CG CD1 doub Y N 422 PHE CG CD2 sing Y N 423 PHE CD1 CE1 sing Y N 424 PHE CD1 HD1 sing N N 425 PHE CD2 CE2 doub Y N 426 PHE CD2 HD2 sing N N 427 PHE CE1 CZ doub Y N 428 PHE CE1 HE1 sing N N 429 PHE CE2 CZ sing Y N 430 PHE CE2 HE2 sing N N 431 PHE CZ HZ sing N N 432 PHE OXT HXT sing N N 433 PRO N CA sing N N 434 PRO N CD sing N N 435 PRO N H sing N N 436 PRO CA C sing N N 437 PRO CA CB sing N N 438 PRO CA HA sing N N 439 PRO C O doub N N 440 PRO C OXT sing N N 441 PRO CB CG sing N N 442 PRO CB HB2 sing N N 443 PRO CB HB3 sing N N 444 PRO CG CD sing N N 445 PRO CG HG2 sing N N 446 PRO CG HG3 sing N N 447 PRO CD HD2 sing N N 448 PRO CD HD3 sing N N 449 PRO OXT HXT sing N N 450 SER N CA sing N N 451 SER N H sing N N 452 SER N H2 sing N N 453 SER CA C sing N N 454 SER CA CB sing N N 455 SER CA HA sing N N 456 SER C O doub N N 457 SER C OXT sing N N 458 SER CB OG sing N N 459 SER CB HB2 sing N N 460 SER CB HB3 sing N N 461 SER OG HG sing N N 462 SER OXT HXT sing N N 463 THR N CA sing N N 464 THR N H sing N N 465 THR N H2 sing N N 466 THR CA C sing N N 467 THR CA CB sing N N 468 THR CA HA sing N N 469 THR C O doub N N 470 THR C OXT sing N N 471 THR CB OG1 sing N N 472 THR CB CG2 sing N N 473 THR CB HB sing N N 474 THR OG1 HG1 sing N N 475 THR CG2 HG21 sing N N 476 THR CG2 HG22 sing N N 477 THR CG2 HG23 sing N N 478 THR OXT HXT sing N N 479 TRP N CA sing N N 480 TRP N H sing N N 481 TRP N H2 sing N N 482 TRP CA C sing N N 483 TRP CA CB sing N N 484 TRP CA HA sing N N 485 TRP C O doub N N 486 TRP C OXT sing N N 487 TRP CB CG sing N N 488 TRP CB HB2 sing N N 489 TRP CB HB3 sing N N 490 TRP CG CD1 doub Y N 491 TRP CG CD2 sing Y N 492 TRP CD1 NE1 sing Y N 493 TRP CD1 HD1 sing N N 494 TRP CD2 CE2 doub Y N 495 TRP CD2 CE3 sing Y N 496 TRP NE1 CE2 sing Y N 497 TRP NE1 HE1 sing N N 498 TRP CE2 CZ2 sing Y N 499 TRP CE3 CZ3 doub Y N 500 TRP CE3 HE3 sing N N 501 TRP CZ2 CH2 doub Y N 502 TRP CZ2 HZ2 sing N N 503 TRP CZ3 CH2 sing Y N 504 TRP CZ3 HZ3 sing N N 505 TRP CH2 HH2 sing N N 506 TRP OXT HXT sing N N 507 TYR N CA sing N N 508 TYR N H sing N N 509 TYR N H2 sing N N 510 TYR CA C sing N N 511 TYR CA CB sing N N 512 TYR CA HA sing N N 513 TYR C O doub N N 514 TYR C OXT sing N N 515 TYR CB CG sing N N 516 TYR CB HB2 sing N N 517 TYR CB HB3 sing N N 518 TYR CG CD1 doub Y N 519 TYR CG CD2 sing Y N 520 TYR CD1 CE1 sing Y N 521 TYR CD1 HD1 sing N N 522 TYR CD2 CE2 doub Y N 523 TYR CD2 HD2 sing N N 524 TYR CE1 CZ doub Y N 525 TYR CE1 HE1 sing N N 526 TYR CE2 CZ sing Y N 527 TYR CE2 HE2 sing N N 528 TYR CZ OH sing N N 529 TYR OH HH sing N N 530 TYR OXT HXT sing N N 531 VAL N CA sing N N 532 VAL N H sing N N 533 VAL N H2 sing N N 534 VAL CA C sing N N 535 VAL CA CB sing N N 536 VAL CA HA sing N N 537 VAL C O doub N N 538 VAL C OXT sing N N 539 VAL CB CG1 sing N N 540 VAL CB CG2 sing N N 541 VAL CB HB sing N N 542 VAL CG1 HG11 sing N N 543 VAL CG1 HG12 sing N N 544 VAL CG1 HG13 sing N N 545 VAL CG2 HG21 sing N N 546 VAL CG2 HG22 sing N N 547 VAL CG2 HG23 sing N N 548 VAL OXT HXT sing N N 549 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1L2D 'double helix' 1L2D 'b-form double helix' 1L2D 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 3 1_555 B DC 15 1_555 -1.345 0.744 -0.139 1.606 -5.697 -28.369 1 B_DG1:DC24_C B 1 ? C 24 ? ? ? 1 A DA 5 1_555 B DT 13 1_555 -1.879 -0.341 -0.470 13.184 -10.406 -7.966 2 B_DA3:DT22_C B 3 ? C 22 ? ? ? 1 A DG 6 1_555 B DC 12 1_555 0.844 -0.323 0.116 2.932 -14.967 -1.163 3 B_DG4:DC21_C B 4 ? C 21 ? 19 1 1 A DA 7 1_555 B DT 11 1_555 -0.036 -0.234 -0.361 -10.185 -8.000 -7.968 4 B_DA5:DT20_C B 5 ? C 20 ? 20 1 1 A DC 8 1_555 B DG 10 1_555 -0.352 0.082 -0.402 5.308 5.874 -7.226 5 B_DC6:DG19_C B 6 ? C 19 ? 19 1 1 A DT 10 1_555 B DA 8 1_555 0.245 0.158 -0.391 -19.011 4.199 -10.067 6 B_DT8:DA17_C B 8 ? C 17 ? 20 1 1 A DG 11 1_555 B DC 7 1_555 0.768 0.124 -0.174 3.836 -0.070 -6.698 7 B_DG9:DC16_C B 9 ? C 16 ? 19 1 1 A DG 12 1_555 B DC 6 1_555 0.876 -0.001 0.029 11.503 -2.799 -10.062 8 B_DG10:DC15_C B 10 ? C 15 ? 19 1 1 A DA 13 1_555 B DT 5 1_555 -1.137 -0.265 0.232 6.724 -10.763 9.300 9 B_DA11:DT14_C B 11 ? C 14 ? 20 1 1 A DC 14 1_555 B DG 4 1_555 1.379 -0.506 -0.542 26.467 -11.777 2.720 10 B_DC12:DG13_C B 12 ? C 13 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 3 1_555 B DC 15 1_555 A DA 5 1_555 B DT 13 1_555 1.621 0.412 6.033 7.682 3.708 74.736 0.127 -0.892 6.163 3.045 -6.309 75.150 1 BB_DG1DA3:DT22DC24_CC B 1 ? C 24 ? B 3 ? C 22 ? 1 A DA 5 1_555 B DT 13 1_555 A DG 6 1_555 B DC 12 1_555 0.435 0.091 3.790 -1.698 3.225 45.790 -0.205 -0.728 3.770 4.137 2.179 45.927 2 BB_DA3DG4:DC21DT22_CC B 3 ? C 22 ? B 4 ? C 21 ? 1 A DG 6 1_555 B DC 12 1_555 A DA 7 1_555 B DT 11 1_555 -0.316 -1.340 3.469 3.214 8.965 33.246 -3.650 1.033 2.976 15.282 -5.480 34.547 3 BB_DG4DA5:DT20DC21_CC B 4 ? C 21 ? B 5 ? C 20 ? 1 A DA 7 1_555 B DT 11 1_555 A DC 8 1_555 B DG 10 1_555 0.147 -0.016 3.056 -0.346 10.366 24.719 -2.546 -0.400 2.817 22.965 0.766 26.776 4 BB_DA5DC6:DG19DT20_CC B 5 ? C 20 ? B 6 ? C 19 ? 1 A DT 10 1_555 B DA 8 1_555 A DG 11 1_555 B DC 7 1_555 0.128 -0.040 2.938 -1.190 7.990 30.080 -1.444 -0.443 2.827 15.057 2.243 31.121 5 BB_DT8DG9:DC16DA17_CC B 8 ? C 17 ? B 9 ? C 16 ? 1 A DG 11 1_555 B DC 7 1_555 A DG 12 1_555 B DC 6 1_555 -0.552 -0.164 3.373 -3.598 -0.839 35.966 -0.141 0.362 3.414 -1.354 5.807 36.149 6 BB_DG9DG10:DC15DC16_CC B 9 ? C 16 ? B 10 ? C 15 ? 1 A DG 12 1_555 B DC 6 1_555 A DA 13 1_555 B DT 5 1_555 1.091 0.124 3.374 1.074 4.319 32.867 -0.538 -1.724 3.395 7.590 -1.888 33.159 7 BB_DG10DA11:DT14DC15_CC B 10 ? C 15 ? B 11 ? C 14 ? 1 A DA 13 1_555 B DT 5 1_555 A DC 14 1_555 B DG 4 1_555 -0.138 0.812 2.953 5.017 3.292 46.650 0.772 0.549 2.971 4.137 -6.305 47.013 8 BB_DA11DC12:DG13DT14_CC B 11 ? C 14 ? B 12 ? C 13 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1L1T _pdbx_initial_refinement_model.details ? #