data_1L2Z # _entry.id 1L2Z # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1L2Z pdb_00001l2z 10.2210/pdb1l2z/pdb RCSB RCSB015599 ? ? WWPDB D_1000015599 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1GYF _pdbx_database_related.details 'GYF DOMAIN FROM HUMAN CD2BP2 PROTEIN' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1L2Z _pdbx_database_status.recvd_initial_deposition_date 2002-02-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Freund, C.' 1 'Kuhne, R.' 2 'Yang, H.' 3 'Park, S.' 4 'Reinherz, E.L.' 5 'Wagner, G.' 6 # _citation.id primary _citation.title 'Dynamic interaction of CD2 with the GYF and the SH3 domain of compartmentalized effector molecules' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 21 _citation.page_first 5985 _citation.page_last 5995 _citation.year 2002 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12426371 _citation.pdbx_database_id_DOI 10.1093/emboj/cdf602 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Freund, C.' 1 ? primary 'Kuhne, R.' 2 ? primary 'Yang, H.' 3 ? primary 'Park, S.' 4 ? primary 'Reinherz, E.L.' 5 ? primary 'Wagner, G.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CD2 ANTIGEN (CYTOPLASMIC TAIL)-BINDING PROTEIN 2' 7320.014 1 ? ? 'Residue 1-62' ? 2 polymer syn 'T-CELL SURFACE ANTIGEN CD2' 1240.416 1 ? ? 'Residue 63-73' ? # _entity_name_com.entity_id 2 _entity_name_com.name 'T-cell surface antigen T11/Leu-5, LFA-2, LFA-3 receptor, Erythrocyte receptor, Rosette receptor' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no DVMWEYKWENTGDAELYGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFDLYT DVMWEYKWENTGDAELYGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFDLYT A ? 2 'polypeptide(L)' no no SHRPPPPGHRV SHRPPPPGHRV B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 VAL n 1 3 MET n 1 4 TRP n 1 5 GLU n 1 6 TYR n 1 7 LYS n 1 8 TRP n 1 9 GLU n 1 10 ASN n 1 11 THR n 1 12 GLY n 1 13 ASP n 1 14 ALA n 1 15 GLU n 1 16 LEU n 1 17 TYR n 1 18 GLY n 1 19 PRO n 1 20 PHE n 1 21 THR n 1 22 SER n 1 23 ALA n 1 24 GLN n 1 25 MET n 1 26 GLN n 1 27 THR n 1 28 TRP n 1 29 VAL n 1 30 SER n 1 31 GLU n 1 32 GLY n 1 33 TYR n 1 34 PHE n 1 35 PRO n 1 36 ASP n 1 37 GLY n 1 38 VAL n 1 39 TYR n 1 40 CYS n 1 41 ARG n 1 42 LYS n 1 43 LEU n 1 44 ASP n 1 45 PRO n 1 46 PRO n 1 47 GLY n 1 48 GLY n 1 49 GLN n 1 50 PHE n 1 51 TYR n 1 52 ASN n 1 53 SER n 1 54 LYS n 1 55 ARG n 1 56 ILE n 1 57 ASP n 1 58 PHE n 1 59 ASP n 1 60 LEU n 1 61 TYR n 1 62 THR n 2 1 SER n 2 2 HIS n 2 3 ARG n 2 4 PRO n 2 5 PRO n 2 6 PRO n 2 7 PRO n 2 8 GLY n 2 9 HIS n 2 10 ARG n 2 11 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'CD2BP2 (amino acids 280-341)' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PTFT74 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'The peptide was chemically synthesized. The sequence of the peptide is naturally found in Homo sapiens (human).' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP CD2B2_HUMAN 1 DVMWEYKWENTGDAELYGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFDLYT 280 O95400 ? 2 UNP CD2_HUMAN 2 SHRPPPPGHRV 294 P06729 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1L2Z A 1 ? 62 ? O95400 280 ? 341 ? 1 62 2 2 1L2Z B 1 ? 11 ? P06729 294 ? 304 ? 63 73 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 3D_15N-separated_NOESY 2 1 1 '2D NOESY' 3 1 1 '2D TOCSY' 4 1 1 '3D 15N edited TOCSY' 5 1 1 '15N HSQC' 6 2 2 '2D NOESY' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature_units 1 298 1 6.3 '50 mM NaPo4' atm K 2 298 1 6.3 '50 mM NaPo4' atm K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 '1 mM GYF domain U-deuterated, U-15N, 1mM Peptide, 50 mM phosphate buffer, pH 6.3, 100% D2O' '100% D2O' 2 '1 mM GYF domain, aromatic amino acids protonated only, 1 mM Peptide protonated' '100% D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.field_strength 1 ? Bruker DRX 600 2 ? Varian UNITY 750 # _pdbx_nmr_refine.entry_id 1L2Z _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ;1000K, force constant NOE 50 kcal mol-1A-2, force constant dihedral angles 200 kcal mol-1 rad-2, 1000 steps minimization, intermolecular NOEs 33, intramolecular NOEs (peptide) 49, intramolecular NOEs (GYF domain) 754 ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1L2Z _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1L2Z _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal X-PLOR 3.1 refinement 'Brunger, A.' 1 XEASY ? 'data analysis' ? 2 PROSA ? processing ? 3 # _exptl.entry_id 1L2Z _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1L2Z _struct.title 'CD2BP2-GYF domain in complex with proline-rich CD2 tail segment peptide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1L2Z _struct_keywords.pdbx_keywords 'PEPTIDE BINDING/SIGNALING PROTEIN' _struct_keywords.text 'GYF domain, protein-protein interaction, proline-rich peptide, CD2, CD2BP2, PEPTIDE BINDING-SIGNALING PROTEIN COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 21 ? GLY A 32 ? THR A 21 GLY A 32 1 ? 12 HELX_P HELX_P2 2 LYS A 54 ? ILE A 56 ? LYS A 54 ILE A 56 5 ? 3 HELX_P HELX_P3 3 ASP A 57 ? TYR A 61 ? ASP A 57 TYR A 61 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASP 44 A . ? ASP 44 A PRO 45 A ? PRO 45 A 1 0.03 2 ASP 44 A . ? ASP 44 A PRO 45 A ? PRO 45 A 2 0.03 3 ASP 44 A . ? ASP 44 A PRO 45 A ? PRO 45 A 3 -0.02 4 ASP 44 A . ? ASP 44 A PRO 45 A ? PRO 45 A 4 -0.01 5 ASP 44 A . ? ASP 44 A PRO 45 A ? PRO 45 A 5 -0.08 6 ASP 44 A . ? ASP 44 A PRO 45 A ? PRO 45 A 6 -0.05 7 ASP 44 A . ? ASP 44 A PRO 45 A ? PRO 45 A 7 -0.11 8 ASP 44 A . ? ASP 44 A PRO 45 A ? PRO 45 A 8 -0.06 9 ASP 44 A . ? ASP 44 A PRO 45 A ? PRO 45 A 9 0.12 10 ASP 44 A . ? ASP 44 A PRO 45 A ? PRO 45 A 10 0.17 11 ASP 44 A . ? ASP 44 A PRO 45 A ? PRO 45 A 11 -0.01 12 ASP 44 A . ? ASP 44 A PRO 45 A ? PRO 45 A 12 0.00 13 ASP 44 A . ? ASP 44 A PRO 45 A ? PRO 45 A 13 -0.04 14 ASP 44 A . ? ASP 44 A PRO 45 A ? PRO 45 A 14 0.11 15 ASP 44 A . ? ASP 44 A PRO 45 A ? PRO 45 A 15 0.00 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 5 ? LYS A 7 ? GLU A 5 LYS A 7 A 2 TYR A 39 ? ARG A 41 ? TYR A 39 ARG A 41 A 3 TYR A 51 ? ASN A 52 ? TYR A 51 ASN A 52 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 7 ? N LYS A 7 O TYR A 39 ? O TYR A 39 A 2 3 N CYS A 40 ? N CYS A 40 O TYR A 51 ? O TYR A 51 # _database_PDB_matrix.entry_id 1L2Z _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1L2Z _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 MET 3 3 3 MET MET A . n A 1 4 TRP 4 4 4 TRP TRP A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 TYR 6 6 6 TYR TYR A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 TRP 8 8 8 TRP TRP A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 ASP 13 13 13 ASP ASP A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 TYR 17 17 17 TYR TYR A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 PHE 20 20 20 PHE PHE A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 GLN 24 24 24 GLN GLN A . n A 1 25 MET 25 25 25 MET MET A . n A 1 26 GLN 26 26 26 GLN GLN A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 TRP 28 28 28 TRP TRP A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 TYR 33 33 33 TYR TYR A . n A 1 34 PHE 34 34 34 PHE PHE A . n A 1 35 PRO 35 35 35 PRO PRO A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 CYS 40 40 40 CYS CYS A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 PRO 45 45 45 PRO PRO A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 SER 53 53 53 SER SER A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 PHE 58 58 58 PHE PHE A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 TYR 61 61 61 TYR TYR A . n A 1 62 THR 62 62 62 THR THR A . n B 2 1 SER 1 63 63 SER SER B . n B 2 2 HIS 2 64 64 HIS HIS B . n B 2 3 ARG 3 65 65 ARG ARG B . n B 2 4 PRO 4 66 66 PRO PRO B . n B 2 5 PRO 5 67 67 PRO PRO B . n B 2 6 PRO 6 68 68 PRO PRO B . n B 2 7 PRO 7 69 69 PRO PRO B . n B 2 8 GLY 8 70 70 GLY GLY B . n B 2 9 HIS 9 71 71 HIS HIS B . n B 2 10 ARG 10 72 72 ARG ARG B . n B 2 11 VAL 11 73 73 VAL VAL B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-11-20 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_struct_assembly 3 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A THR 27 ? ? H A GLU 31 ? ? 1.52 2 2 O A THR 27 ? ? H A GLU 31 ? ? 1.51 3 3 O A THR 27 ? ? H A GLU 31 ? ? 1.48 4 4 O A THR 27 ? ? H A GLU 31 ? ? 1.55 5 5 O A THR 27 ? ? H A GLU 31 ? ? 1.56 6 6 O A THR 27 ? ? H A GLU 31 ? ? 1.54 7 7 O A THR 27 ? ? H A GLU 31 ? ? 1.54 8 8 O A THR 27 ? ? H A GLU 31 ? ? 1.47 9 9 O A THR 27 ? ? H A GLU 31 ? ? 1.46 10 10 O A THR 27 ? ? H A GLU 31 ? ? 1.51 11 11 O A THR 27 ? ? H A GLU 31 ? ? 1.50 12 12 H A TYR 6 ? ? O A TYR 17 ? ? 1.41 13 12 O A THR 27 ? ? H A GLU 31 ? ? 1.45 14 13 O A THR 27 ? ? H A GLU 31 ? ? 1.45 15 13 H A TYR 6 ? ? O A TYR 17 ? ? 1.46 16 14 O A THR 27 ? ? H A GLU 31 ? ? 1.54 17 14 H A TYR 6 ? ? O A TYR 17 ? ? 1.58 18 15 H A TYR 6 ? ? O A TYR 17 ? ? 1.56 19 15 O A PHE 34 ? ? HZ1 A LYS 54 ? ? 1.58 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 14 ? ? -43.01 163.75 2 1 ARG A 41 ? ? -170.40 137.41 3 1 GLN A 49 ? ? -67.00 75.56 4 1 PHE A 50 ? ? -42.15 163.81 5 1 TYR A 61 ? ? -142.78 -46.10 6 1 PRO B 69 ? ? -61.42 -179.44 7 1 HIS B 71 ? ? 41.98 -163.79 8 1 ARG B 72 ? ? 176.05 106.63 9 2 ALA A 14 ? ? -42.21 159.11 10 2 TYR A 17 ? ? -114.30 -166.10 11 2 PHE A 34 ? ? 62.90 62.38 12 2 ARG A 41 ? ? -178.28 138.27 13 2 GLN A 49 ? ? -67.38 77.14 14 2 PHE A 50 ? ? -31.87 144.43 15 2 TYR A 61 ? ? -138.27 -46.57 16 2 PRO B 69 ? ? -59.69 -178.06 17 2 HIS B 71 ? ? 45.02 -167.19 18 2 ARG B 72 ? ? 176.09 135.54 19 3 ASN A 10 ? ? -97.88 40.12 20 3 ALA A 14 ? ? -51.18 178.09 21 3 TYR A 17 ? ? -111.31 -164.49 22 3 PHE A 34 ? ? -105.35 78.67 23 3 ARG A 41 ? ? -178.85 141.88 24 3 GLN A 49 ? ? -67.11 74.55 25 3 PHE A 50 ? ? -44.27 159.88 26 3 TYR A 61 ? ? -140.09 -62.71 27 3 PRO B 69 ? ? -65.14 -179.21 28 3 HIS B 71 ? ? 43.34 -165.26 29 3 ARG B 72 ? ? 174.73 92.39 30 4 GLU A 15 ? ? -58.40 179.31 31 4 TYR A 17 ? ? -107.73 -161.91 32 4 GLN A 49 ? ? -68.71 72.65 33 4 PHE A 50 ? ? -47.45 160.07 34 4 ASP A 57 ? ? -107.63 79.32 35 4 TYR A 61 ? ? -145.28 -52.23 36 4 PRO B 69 ? ? -62.10 -179.57 37 4 HIS B 71 ? ? 66.31 120.88 38 5 ASN A 10 ? ? -98.12 39.74 39 5 ALA A 14 ? ? -45.76 163.04 40 5 TYR A 17 ? ? -111.02 -163.49 41 5 PRO A 19 ? ? -79.02 28.68 42 5 ARG A 41 ? ? -175.20 142.42 43 5 GLN A 49 ? ? -66.42 75.16 44 5 PHE A 50 ? ? -42.80 158.77 45 5 TYR A 61 ? ? -140.19 -51.71 46 5 HIS B 64 ? ? -166.28 -41.89 47 5 PRO B 69 ? ? -59.36 -178.39 48 5 HIS B 71 ? ? 44.81 -167.26 49 5 ARG B 72 ? ? 178.81 88.85 50 6 GLU A 15 ? ? -56.90 -176.80 51 6 TYR A 17 ? ? -115.77 -163.52 52 6 PHE A 34 ? ? 60.40 61.86 53 6 PHE A 50 ? ? -51.57 179.36 54 6 TYR A 61 ? ? -140.88 -47.83 55 6 HIS B 64 ? ? -127.06 -169.33 56 6 ARG B 65 ? ? 63.38 137.37 57 6 PRO B 69 ? ? -58.69 -174.91 58 6 HIS B 71 ? ? 43.20 -164.70 59 6 ARG B 72 ? ? 175.73 119.93 60 7 VAL A 2 ? ? -59.05 108.37 61 7 ALA A 14 ? ? -47.76 167.51 62 7 PHE A 34 ? ? -107.48 73.62 63 7 ARG A 41 ? ? -179.57 126.44 64 7 GLN A 49 ? ? -67.76 74.70 65 7 PHE A 50 ? ? -41.73 160.18 66 7 TYR A 61 ? ? -135.20 -48.85 67 7 HIS B 64 ? ? -94.26 51.34 68 7 PRO B 69 ? ? -65.26 -178.89 69 7 HIS B 71 ? ? 42.65 -163.89 70 7 ARG B 72 ? ? 179.18 98.85 71 8 ALA A 14 ? ? -44.20 163.05 72 8 ARG A 41 ? ? -179.72 145.25 73 8 GLN A 49 ? ? -67.06 75.84 74 8 PHE A 50 ? ? -38.92 156.15 75 8 TYR A 61 ? ? -139.52 -51.10 76 8 PRO B 69 ? ? -59.33 -177.71 77 8 HIS B 71 ? ? 44.49 -167.09 78 8 ARG B 72 ? ? 176.81 98.69 79 9 ARG A 41 ? ? -179.85 143.84 80 9 GLN A 49 ? ? -67.47 73.80 81 9 PHE A 50 ? ? -45.58 166.72 82 9 TYR A 61 ? ? -146.89 -47.53 83 9 PRO B 69 ? ? -60.52 -176.59 84 9 HIS B 71 ? ? 43.14 -164.05 85 9 ARG B 72 ? ? -174.40 124.31 86 10 ALA A 14 ? ? -45.66 151.62 87 10 TYR A 17 ? ? -113.47 -166.11 88 10 PHE A 34 ? ? -109.39 76.38 89 10 ARG A 41 ? ? -175.29 127.19 90 10 PHE A 50 ? ? -58.62 -178.07 91 10 TYR A 61 ? ? -144.67 -47.45 92 10 ARG B 65 ? ? 63.09 138.79 93 10 PRO B 69 ? ? -61.32 -177.65 94 10 HIS B 71 ? ? 44.31 -167.82 95 10 ARG B 72 ? ? 173.84 73.46 96 11 ALA A 14 ? ? -43.67 150.85 97 11 TYR A 17 ? ? -126.45 -163.99 98 11 PHE A 34 ? ? -111.04 78.82 99 11 ARG A 41 ? ? -173.71 140.50 100 11 GLN A 49 ? ? -66.36 74.74 101 11 PHE A 50 ? ? -44.19 166.30 102 11 TYR A 61 ? ? -139.59 -46.33 103 11 HIS B 71 ? ? 45.91 -166.25 104 11 ARG B 72 ? ? -163.84 73.48 105 12 GLU A 15 ? ? -59.01 -177.75 106 12 PHE A 20 ? ? -43.14 165.30 107 12 GLN A 49 ? ? 42.07 70.94 108 12 PHE A 50 ? ? -45.06 167.13 109 12 PHE A 58 ? ? -94.46 30.35 110 12 TYR A 61 ? ? -133.49 -48.23 111 12 HIS B 71 ? ? 43.33 -165.53 112 12 ARG B 72 ? ? 177.50 96.69 113 13 THR A 11 ? ? -76.37 -164.25 114 13 ASP A 13 ? ? -153.66 -62.60 115 13 ALA A 14 ? ? 47.74 -175.60 116 13 PHE A 20 ? ? -43.01 166.18 117 13 PHE A 50 ? ? -44.87 161.65 118 13 TYR A 61 ? ? -137.71 -47.42 119 13 HIS B 64 ? ? -63.45 -78.24 120 13 HIS B 71 ? ? 43.70 -165.65 121 13 ARG B 72 ? ? 175.24 108.39 122 14 ASP A 13 ? ? -146.68 -59.82 123 14 ALA A 14 ? ? 47.85 -176.07 124 14 PHE A 34 ? ? -106.88 75.29 125 14 ARG A 41 ? ? 179.02 151.76 126 14 GLN A 49 ? ? -66.61 74.84 127 14 PHE A 50 ? ? -42.69 158.10 128 14 ASP A 59 ? ? -145.69 -37.13 129 14 HIS B 71 ? ? 44.84 -166.95 130 14 ARG B 72 ? ? 175.32 134.32 131 15 ALA A 14 ? ? -43.85 152.38 132 15 GLU A 15 ? ? -55.67 -176.24 133 15 LEU A 16 ? ? -159.13 82.58 134 15 TYR A 17 ? ? -113.88 -165.91 135 15 PHE A 20 ? ? -45.72 161.07 136 15 TYR A 39 ? ? -68.51 83.30 137 15 ARG A 41 ? ? -179.06 147.18 138 15 GLN A 49 ? ? -67.77 73.62 139 15 PHE A 50 ? ? -45.27 166.46 140 15 TYR A 61 ? ? -139.39 -47.26 141 15 PRO B 69 ? ? -64.76 -179.37 142 15 HIS B 71 ? ? 43.01 -164.55 143 15 ARG B 72 ? ? 178.46 124.99 #