HEADER BIOSYNTHETIC PROTEIN 06-MAR-02 1L5A TITLE CRYSTAL STRUCTURE OF VIBH, AN NRPS CONDENSATION ENZYME COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMIDE SYNTHASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: VIBH; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 666; SOURCE 4 GENE: VIBH; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET29B KEYWDS NONRIBOSOMAL PEPTIDE SYNTHETASE, NRPS CONDENSATION DOMAIN, AMIDE KEYWDS 2 SYNTHASE, VIBRIOBACTIN, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.A.KEATING,C.G.MARSHALL,C.T.WALSH,A.E.KEATING REVDAT 3 14-FEB-24 1L5A 1 REMARK REVDAT 2 24-FEB-09 1L5A 1 VERSN REVDAT 1 26-JUN-02 1L5A 0 JRNL AUTH T.A.KEATING,C.G.MARSHALL,C.T.WALSH,A.E.KEATING JRNL TITL THE STRUCTURE OF VIBH REPRESENTS NONRIBOSOMAL PEPTIDE JRNL TITL 2 SYNTHETASE CONDENSATION, CYCLIZATION AND EPIMERIZATION JRNL TITL 3 DOMAINS. JRNL REF NAT.STRUCT.BIOL. V. 9 522 2002 JRNL REFN ISSN 1072-8368 JRNL PMID 12055621 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.14 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2053567.310 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.4 REMARK 3 NUMBER OF REFLECTIONS : 72923 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 7379 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.71 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 76.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 873 REMARK 3 BIN R VALUE (WORKING SET) : 0.3140 REMARK 3 BIN FREE R VALUE : 0.3770 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 970 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.012 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10118 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 194 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.21000 REMARK 3 B22 (A**2) : -2.25000 REMARK 3 B33 (A**2) : 2.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 2.75000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM SIGMAA (A) : 0.34 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.42 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.45 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.00 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.960 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.30 REMARK 3 BSOL : 33.78 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1L5A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-MAR-02. REMARK 100 THE DEPOSITION ID IS D_1000015652. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-MAY-01; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : NSLS; NSLS REMARK 200 BEAMLINE : X12C; X12C REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9788, 0.9785, 0.9633; 0.9633 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, TORROIDAL REMARK 200 MIRROR; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; NULL REMARK 200 DETECTOR MANUFACTURER : BRANDEIS - B4; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73969 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04600 REMARK 200 FOR THE DATA SET : 19.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 58.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.32100 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, TRIS, MAGNESIUM FORMATE, PH REMARK 280 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 66.29750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 80.67450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 66.29750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 80.67450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 425 REMARK 465 ALA A 426 REMARK 465 ALA A 427 REMARK 465 THR A 428 REMARK 465 THR A 429 REMARK 465 SER A 430 REMARK 465 THR A 431 REMARK 465 ARG A 432 REMARK 465 ALA A 433 REMARK 465 ILE A 434 REMARK 465 ALA A 435 REMARK 465 SER A 436 REMARK 465 LEU B 425 REMARK 465 ALA B 426 REMARK 465 ALA B 427 REMARK 465 THR B 428 REMARK 465 THR B 429 REMARK 465 SER B 430 REMARK 465 THR B 431 REMARK 465 ARG B 432 REMARK 465 ALA B 433 REMARK 465 ILE B 434 REMARK 465 ALA B 435 REMARK 465 SER B 436 REMARK 465 LEU C 425 REMARK 465 ALA C 426 REMARK 465 ALA C 427 REMARK 465 THR C 428 REMARK 465 THR C 429 REMARK 465 SER C 430 REMARK 465 THR C 431 REMARK 465 ARG C 432 REMARK 465 ALA C 433 REMARK 465 ILE C 434 REMARK 465 ALA C 435 REMARK 465 SER C 436 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 19 CG OD1 ND2 REMARK 470 LEU A 80 CG CD1 CD2 REMARK 470 GLU A 81 CG CD OE1 OE2 REMARK 470 GLU A 190 CG CD OE1 OE2 REMARK 470 GLN A 218 CG CD OE1 NE2 REMARK 470 HIS A 221 CG ND1 CD2 CE1 NE2 REMARK 470 GLN A 231 CG CD OE1 NE2 REMARK 470 GLN A 287 CG CD OE1 NE2 REMARK 470 ASN A 293 CG OD1 ND2 REMARK 470 LYS A 296 CG CD CE NZ REMARK 470 GLU A 395 CG CD OE1 OE2 REMARK 470 ARG A 396 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 399 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 78 CG1 CG2 CD1 REMARK 470 HIS B 79 CG ND1 CD2 CE1 NE2 REMARK 470 TYR B 213 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 HIS B 221 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 225 CG CD CE NZ REMARK 470 GLN B 288 CG CD OE1 NE2 REMARK 470 LYS B 296 CG CD CE NZ REMARK 470 GLU B 360 CG CD OE1 OE2 REMARK 470 GLN B 371 CG CD OE1 NE2 REMARK 470 GLU B 395 CG CD OE1 OE2 REMARK 470 GLN B 409 CG CD OE1 NE2 REMARK 470 GLN B 410 CG CD OE1 NE2 REMARK 470 ARG B 417 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 418 CG CD1 CD2 REMARK 470 LEU B 419 CG CD1 CD2 REMARK 470 LEU C 80 CG CD1 CD2 REMARK 470 GLU C 81 CG CD OE1 OE2 REMARK 470 GLN C 218 CG CD OE1 NE2 REMARK 470 LEU C 219 CG CD1 CD2 REMARK 470 LYS C 225 CG CD CE NZ REMARK 470 GLN C 231 CG CD OE1 NE2 REMARK 470 LYS C 296 CG CD CE NZ REMARK 470 GLN C 300 CG CD OE1 NE2 REMARK 470 ARG C 303 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 325 CG CD OE1 OE2 REMARK 470 GLU C 340 CG CD OE1 OE2 REMARK 470 GLU C 360 CG CD OE1 OE2 REMARK 470 ARG C 367 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 373 CG CD OE1 OE2 REMARK 470 LEU C 374 CG CD1 CD2 REMARK 470 LEU C 405 CG CD1 CD2 REMARK 470 ARG C 407 CG CD NE CZ NH1 NH2 REMARK 470 GLN C 410 CG CD OE1 NE2 REMARK 470 GLU C 412 CG CD OE1 OE2 REMARK 470 ARG C 417 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR B 99 N ILE B 101 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU C 351 CA - CB - CG ANGL. DEV. = 14.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 15 68.00 -151.89 REMARK 500 HIS A 17 5.05 -67.21 REMARK 500 ASP A 21 66.63 -119.90 REMARK 500 GLU A 81 42.62 -100.49 REMARK 500 ASP A 130 -169.51 -115.95 REMARK 500 GLU A 250 58.01 -159.67 REMARK 500 ALA A 345 129.26 -32.91 REMARK 500 SER A 356 46.26 -162.11 REMARK 500 HIS A 372 -114.66 -133.29 REMARK 500 SER A 384 17.53 -145.34 REMARK 500 GLN A 410 30.19 -65.69 REMARK 500 VAL A 411 23.76 -154.70 REMARK 500 GLN A 413 49.66 24.45 REMARK 500 TYR B 15 63.53 -151.58 REMARK 500 HIS B 17 -71.46 -61.24 REMARK 500 PRO B 32 52.63 -91.15 REMARK 500 ALA B 82 -86.43 -65.60 REMARK 500 SER B 98 54.55 36.93 REMARK 500 THR B 99 100.74 -55.07 REMARK 500 LEU B 100 -42.25 -9.82 REMARK 500 LEU B 205 31.16 -91.03 REMARK 500 GLN B 231 61.08 39.46 REMARK 500 GLU B 250 56.01 -170.53 REMARK 500 TRP B 264 113.86 -38.90 REMARK 500 GLN B 288 34.08 78.22 REMARK 500 ALA B 345 127.81 -34.84 REMARK 500 ALA B 355 131.24 -172.52 REMARK 500 SER B 356 24.90 -140.99 REMARK 500 HIS B 372 -103.52 -121.04 REMARK 500 GLN B 410 12.13 -69.24 REMARK 500 VAL B 411 26.06 -141.14 REMARK 500 GLN B 413 34.26 39.03 REMARK 500 PRO B 422 163.75 -49.85 REMARK 500 ALA B 423 -95.16 -32.59 REMARK 500 ASP C 21 65.60 -114.32 REMARK 500 SER C 77 -7.16 -59.15 REMARK 500 GLU C 81 52.56 -93.40 REMARK 500 THR C 99 89.76 -151.37 REMARK 500 ASP C 102 53.27 36.60 REMARK 500 ASP C 130 -168.55 -112.79 REMARK 500 GLN C 152 161.31 -45.52 REMARK 500 GLU C 190 38.21 -76.48 REMARK 500 SER C 206 150.99 -47.25 REMARK 500 HIS C 207 87.22 -155.00 REMARK 500 LEU C 211 131.62 -175.27 REMARK 500 TYR C 213 97.20 -168.44 REMARK 500 GLU C 250 56.45 -155.69 REMARK 500 ASP C 252 30.09 -91.58 REMARK 500 PRO C 370 -7.78 -50.29 REMARK 500 HIS C 372 -105.52 -111.91 REMARK 500 REMARK 500 THIS ENTRY HAS 53 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1L5A A 1 436 UNP Q9KTV9 Q9KTV9_VIBCH 1 436 DBREF 1L5A B 1 436 UNP Q9KTV9 Q9KTV9_VIBCH 1 436 DBREF 1L5A C 1 436 UNP Q9KTV9 Q9KTV9_VIBCH 1 436 SEQRES 1 A 436 MET LEU LEU ALA GLN LYS PRO PHE TRP GLN ARG HIS LEU SEQRES 2 A 436 ALA TYR PRO HIS ILE ASN LEU ASP THR VAL ALA HIS SER SEQRES 3 A 436 LEU ARG LEU THR GLY PRO LEU ASP THR THR LEU LEU LEU SEQRES 4 A 436 ARG ALA LEU HIS LEU THR VAL SER GLU ILE ASP LEU PHE SEQRES 5 A 436 ARG ALA ARG PHE SER ALA GLN GLY GLU LEU TYR TRP HIS SEQRES 6 A 436 PRO PHE SER PRO PRO ILE ASP TYR GLN ASP LEU SER ILE SEQRES 7 A 436 HIS LEU GLU ALA GLU PRO LEU ALA TRP ARG GLN ILE GLU SEQRES 8 A 436 GLN ASP LEU GLN ARG SER SER THR LEU ILE ASP ALA PRO SEQRES 9 A 436 ILE THR SER HIS GLN VAL TYR ARG LEU SER HIS SER GLU SEQRES 10 A 436 HIS LEU ILE TYR THR ARG ALA HIS HIS ILE VAL LEU ASP SEQRES 11 A 436 GLY TYR GLY MET MET LEU PHE GLU GLN ARG LEU SER GLN SEQRES 12 A 436 HIS TYR GLN SER LEU LEU SER GLY GLN THR PRO THR ALA SEQRES 13 A 436 ALA PHE LYS PRO TYR GLN SER TYR LEU GLU GLU GLU ALA SEQRES 14 A 436 ALA TYR LEU THR SER HIS ARG TYR TRP GLN ASP LYS GLN SEQRES 15 A 436 PHE TRP GLN GLY TYR LEU ARG GLU ALA PRO ASP LEU THR SEQRES 16 A 436 LEU THR SER ALA THR TYR ASP PRO GLN LEU SER HIS ALA SEQRES 17 A 436 VAL SER LEU SER TYR THR LEU ASN SER GLN LEU ASN HIS SEQRES 18 A 436 LEU LEU LEU LYS LEU ALA ASN ALA ASN GLN ILE GLY TRP SEQRES 19 A 436 PRO ASP ALA LEU VAL ALA LEU CYS ALA LEU TYR LEU GLU SEQRES 20 A 436 SER ALA GLU PRO ASP ALA PRO TRP LEU TRP LEU PRO PHE SEQRES 21 A 436 MET ASN ARG TRP GLY SER VAL ALA ALA ASN VAL PRO GLY SEQRES 22 A 436 LEU MET VAL ASN SER LEU PRO LEU LEU ARG LEU SER ALA SEQRES 23 A 436 GLN GLN THR SER LEU GLY ASN TYR LEU LYS GLN SER GLY SEQRES 24 A 436 GLN ALA ILE ARG SER LEU TYR LEU HIS GLY ARG TYR ARG SEQRES 25 A 436 ILE GLU GLN ILE GLU GLN ASP GLN GLY LEU ASN ALA GLU SEQRES 26 A 436 GLN SER TYR PHE MET SER PRO PHE ILE ASN ILE LEU PRO SEQRES 27 A 436 PHE GLU SER PRO HIS PHE ALA ASP CYS GLN THR GLU LEU SEQRES 28 A 436 LYS VAL LEU ALA SER GLY SER ALA GLU GLY ILE ASN PHE SEQRES 29 A 436 THR PHE ARG GLY SER PRO GLN HIS GLU LEU CYS LEU ASP SEQRES 30 A 436 ILE THR ALA ASP LEU ALA SER TYR PRO GLN SER HIS TRP SEQRES 31 A 436 GLN SER HIS CYS GLU ARG PHE PRO ARG PHE PHE GLU GLN SEQRES 32 A 436 LEU LEU ALA ARG PHE GLN GLN VAL GLU GLN ASP VAL ALA SEQRES 33 A 436 ARG LEU LEU ALA GLU PRO ALA ALA LEU ALA ALA THR THR SEQRES 34 A 436 SER THR ARG ALA ILE ALA SER SEQRES 1 B 436 MET LEU LEU ALA GLN LYS PRO PHE TRP GLN ARG HIS LEU SEQRES 2 B 436 ALA TYR PRO HIS ILE ASN LEU ASP THR VAL ALA HIS SER SEQRES 3 B 436 LEU ARG LEU THR GLY PRO LEU ASP THR THR LEU LEU LEU SEQRES 4 B 436 ARG ALA LEU HIS LEU THR VAL SER GLU ILE ASP LEU PHE SEQRES 5 B 436 ARG ALA ARG PHE SER ALA GLN GLY GLU LEU TYR TRP HIS SEQRES 6 B 436 PRO PHE SER PRO PRO ILE ASP TYR GLN ASP LEU SER ILE SEQRES 7 B 436 HIS LEU GLU ALA GLU PRO LEU ALA TRP ARG GLN ILE GLU SEQRES 8 B 436 GLN ASP LEU GLN ARG SER SER THR LEU ILE ASP ALA PRO SEQRES 9 B 436 ILE THR SER HIS GLN VAL TYR ARG LEU SER HIS SER GLU SEQRES 10 B 436 HIS LEU ILE TYR THR ARG ALA HIS HIS ILE VAL LEU ASP SEQRES 11 B 436 GLY TYR GLY MET MET LEU PHE GLU GLN ARG LEU SER GLN SEQRES 12 B 436 HIS TYR GLN SER LEU LEU SER GLY GLN THR PRO THR ALA SEQRES 13 B 436 ALA PHE LYS PRO TYR GLN SER TYR LEU GLU GLU GLU ALA SEQRES 14 B 436 ALA TYR LEU THR SER HIS ARG TYR TRP GLN ASP LYS GLN SEQRES 15 B 436 PHE TRP GLN GLY TYR LEU ARG GLU ALA PRO ASP LEU THR SEQRES 16 B 436 LEU THR SER ALA THR TYR ASP PRO GLN LEU SER HIS ALA SEQRES 17 B 436 VAL SER LEU SER TYR THR LEU ASN SER GLN LEU ASN HIS SEQRES 18 B 436 LEU LEU LEU LYS LEU ALA ASN ALA ASN GLN ILE GLY TRP SEQRES 19 B 436 PRO ASP ALA LEU VAL ALA LEU CYS ALA LEU TYR LEU GLU SEQRES 20 B 436 SER ALA GLU PRO ASP ALA PRO TRP LEU TRP LEU PRO PHE SEQRES 21 B 436 MET ASN ARG TRP GLY SER VAL ALA ALA ASN VAL PRO GLY SEQRES 22 B 436 LEU MET VAL ASN SER LEU PRO LEU LEU ARG LEU SER ALA SEQRES 23 B 436 GLN GLN THR SER LEU GLY ASN TYR LEU LYS GLN SER GLY SEQRES 24 B 436 GLN ALA ILE ARG SER LEU TYR LEU HIS GLY ARG TYR ARG SEQRES 25 B 436 ILE GLU GLN ILE GLU GLN ASP GLN GLY LEU ASN ALA GLU SEQRES 26 B 436 GLN SER TYR PHE MET SER PRO PHE ILE ASN ILE LEU PRO SEQRES 27 B 436 PHE GLU SER PRO HIS PHE ALA ASP CYS GLN THR GLU LEU SEQRES 28 B 436 LYS VAL LEU ALA SER GLY SER ALA GLU GLY ILE ASN PHE SEQRES 29 B 436 THR PHE ARG GLY SER PRO GLN HIS GLU LEU CYS LEU ASP SEQRES 30 B 436 ILE THR ALA ASP LEU ALA SER TYR PRO GLN SER HIS TRP SEQRES 31 B 436 GLN SER HIS CYS GLU ARG PHE PRO ARG PHE PHE GLU GLN SEQRES 32 B 436 LEU LEU ALA ARG PHE GLN GLN VAL GLU GLN ASP VAL ALA SEQRES 33 B 436 ARG LEU LEU ALA GLU PRO ALA ALA LEU ALA ALA THR THR SEQRES 34 B 436 SER THR ARG ALA ILE ALA SER SEQRES 1 C 436 MET LEU LEU ALA GLN LYS PRO PHE TRP GLN ARG HIS LEU SEQRES 2 C 436 ALA TYR PRO HIS ILE ASN LEU ASP THR VAL ALA HIS SER SEQRES 3 C 436 LEU ARG LEU THR GLY PRO LEU ASP THR THR LEU LEU LEU SEQRES 4 C 436 ARG ALA LEU HIS LEU THR VAL SER GLU ILE ASP LEU PHE SEQRES 5 C 436 ARG ALA ARG PHE SER ALA GLN GLY GLU LEU TYR TRP HIS SEQRES 6 C 436 PRO PHE SER PRO PRO ILE ASP TYR GLN ASP LEU SER ILE SEQRES 7 C 436 HIS LEU GLU ALA GLU PRO LEU ALA TRP ARG GLN ILE GLU SEQRES 8 C 436 GLN ASP LEU GLN ARG SER SER THR LEU ILE ASP ALA PRO SEQRES 9 C 436 ILE THR SER HIS GLN VAL TYR ARG LEU SER HIS SER GLU SEQRES 10 C 436 HIS LEU ILE TYR THR ARG ALA HIS HIS ILE VAL LEU ASP SEQRES 11 C 436 GLY TYR GLY MET MET LEU PHE GLU GLN ARG LEU SER GLN SEQRES 12 C 436 HIS TYR GLN SER LEU LEU SER GLY GLN THR PRO THR ALA SEQRES 13 C 436 ALA PHE LYS PRO TYR GLN SER TYR LEU GLU GLU GLU ALA SEQRES 14 C 436 ALA TYR LEU THR SER HIS ARG TYR TRP GLN ASP LYS GLN SEQRES 15 C 436 PHE TRP GLN GLY TYR LEU ARG GLU ALA PRO ASP LEU THR SEQRES 16 C 436 LEU THR SER ALA THR TYR ASP PRO GLN LEU SER HIS ALA SEQRES 17 C 436 VAL SER LEU SER TYR THR LEU ASN SER GLN LEU ASN HIS SEQRES 18 C 436 LEU LEU LEU LYS LEU ALA ASN ALA ASN GLN ILE GLY TRP SEQRES 19 C 436 PRO ASP ALA LEU VAL ALA LEU CYS ALA LEU TYR LEU GLU SEQRES 20 C 436 SER ALA GLU PRO ASP ALA PRO TRP LEU TRP LEU PRO PHE SEQRES 21 C 436 MET ASN ARG TRP GLY SER VAL ALA ALA ASN VAL PRO GLY SEQRES 22 C 436 LEU MET VAL ASN SER LEU PRO LEU LEU ARG LEU SER ALA SEQRES 23 C 436 GLN GLN THR SER LEU GLY ASN TYR LEU LYS GLN SER GLY SEQRES 24 C 436 GLN ALA ILE ARG SER LEU TYR LEU HIS GLY ARG TYR ARG SEQRES 25 C 436 ILE GLU GLN ILE GLU GLN ASP GLN GLY LEU ASN ALA GLU SEQRES 26 C 436 GLN SER TYR PHE MET SER PRO PHE ILE ASN ILE LEU PRO SEQRES 27 C 436 PHE GLU SER PRO HIS PHE ALA ASP CYS GLN THR GLU LEU SEQRES 28 C 436 LYS VAL LEU ALA SER GLY SER ALA GLU GLY ILE ASN PHE SEQRES 29 C 436 THR PHE ARG GLY SER PRO GLN HIS GLU LEU CYS LEU ASP SEQRES 30 C 436 ILE THR ALA ASP LEU ALA SER TYR PRO GLN SER HIS TRP SEQRES 31 C 436 GLN SER HIS CYS GLU ARG PHE PRO ARG PHE PHE GLU GLN SEQRES 32 C 436 LEU LEU ALA ARG PHE GLN GLN VAL GLU GLN ASP VAL ALA SEQRES 33 C 436 ARG LEU LEU ALA GLU PRO ALA ALA LEU ALA ALA THR THR SEQRES 34 C 436 SER THR ARG ALA ILE ALA SER FORMUL 4 HOH *194(H2 O) HELIX 1 1 LEU A 2 ALA A 4 5 3 HELIX 2 2 GLN A 5 TYR A 15 1 11 HELIX 3 3 ASP A 34 GLU A 48 1 15 HELIX 4 4 ILE A 49 PHE A 52 5 4 HELIX 5 5 GLU A 81 GLN A 95 1 15 HELIX 6 6 ASP A 130 GLY A 151 1 22 HELIX 7 7 PRO A 160 THR A 173 1 14 HELIX 8 8 SER A 174 GLU A 190 1 17 HELIX 9 9 ASP A 202 SER A 206 5 5 HELIX 10 10 ASN A 216 ASN A 230 1 15 HELIX 11 11 GLY A 233 GLU A 250 1 18 HELIX 12 12 SER A 266 VAL A 271 5 6 HELIX 13 13 SER A 290 HIS A 308 1 19 HELIX 14 14 ARG A 312 GLN A 320 1 9 HELIX 15 15 PRO A 386 GLN A 410 1 25 HELIX 16 16 ASP A 414 GLU A 421 1 8 HELIX 17 17 GLN B 5 TYR B 15 1 11 HELIX 18 18 ASP B 34 SER B 47 1 14 HELIX 19 19 GLU B 48 PHE B 52 5 5 HELIX 20 20 GLU B 81 GLN B 95 1 15 HELIX 21 21 ASP B 130 SER B 150 1 21 HELIX 22 22 PRO B 160 THR B 173 1 14 HELIX 23 23 SER B 174 GLU B 190 1 17 HELIX 24 24 ASP B 202 SER B 206 5 5 HELIX 25 25 ASN B 216 ASN B 230 1 15 HELIX 26 26 GLY B 233 LEU B 246 1 14 HELIX 27 27 GLU B 247 ALA B 249 5 3 HELIX 28 28 SER B 266 VAL B 271 5 6 HELIX 29 29 SER B 290 GLY B 309 1 20 HELIX 30 30 ARG B 312 GLN B 320 1 9 HELIX 31 31 PRO B 386 GLN B 410 1 25 HELIX 32 32 ASP B 414 LEU B 419 1 6 HELIX 33 33 GLN C 5 TYR C 15 1 11 HELIX 34 34 ASP C 34 ILE C 49 1 16 HELIX 35 35 ASP C 50 PHE C 52 5 3 HELIX 36 36 GLU C 81 LEU C 94 1 14 HELIX 37 37 ASP C 130 GLY C 151 1 22 HELIX 38 38 PRO C 160 SER C 174 1 15 HELIX 39 39 SER C 174 GLU C 190 1 17 HELIX 40 40 ASP C 202 SER C 206 5 5 HELIX 41 41 ASN C 216 ASN C 230 1 15 HELIX 42 42 GLY C 233 GLU C 250 1 18 HELIX 43 43 SER C 266 VAL C 271 5 6 HELIX 44 44 SER C 290 HIS C 308 1 19 HELIX 45 45 ARG C 312 GLN C 320 1 9 HELIX 46 46 PRO C 386 VAL C 411 1 26 HELIX 47 47 ASP C 414 GLU C 421 1 8 SHEET 1 A 5 ASP A 72 ASP A 75 0 SHEET 2 A 5 SER A 107 SER A 114 1 O VAL A 110 N ASP A 72 SHEET 3 A 5 GLU A 117 HIS A 125 -1 O TYR A 121 N GLN A 109 SHEET 4 A 5 THR A 22 THR A 30 -1 N LEU A 27 O ILE A 120 SHEET 5 A 5 GLN A 348 SER A 356 -1 O LEU A 354 N ALA A 24 SHEET 1 B 2 ALA A 54 PHE A 56 0 SHEET 2 B 2 LEU A 62 TRP A 64 -1 O TYR A 63 N ARG A 55 SHEET 1 C 4 ALA A 208 THR A 214 0 SHEET 2 C 4 LEU A 374 ASP A 381 -1 O LEU A 376 N TYR A 213 SHEET 3 C 4 ILE A 362 GLY A 368 -1 N ASN A 363 O THR A 379 SHEET 4 C 4 PHE A 333 LEU A 337 1 N LEU A 337 O PHE A 366 SHEET 1 D 2 TRP A 255 PHE A 260 0 SHEET 2 D 2 ASN A 277 LEU A 282 -1 O ASN A 277 N PHE A 260 SHEET 1 E 5 ASP B 72 ASP B 75 0 SHEET 2 E 5 THR B 106 ARG B 112 1 O VAL B 110 N ASP B 72 SHEET 3 E 5 GLU B 117 HIS B 125 -1 O TYR B 121 N GLN B 109 SHEET 4 E 5 THR B 22 THR B 30 -1 N VAL B 23 O ALA B 124 SHEET 5 E 5 GLN B 348 SER B 356 -1 O GLN B 348 N THR B 30 SHEET 1 F 2 ALA B 54 PHE B 56 0 SHEET 2 F 2 LEU B 62 TRP B 64 -1 O TYR B 63 N ARG B 55 SHEET 1 G 4 ALA B 208 THR B 214 0 SHEET 2 G 4 LEU B 374 ASP B 381 -1 O LEU B 376 N TYR B 213 SHEET 3 G 4 ILE B 362 GLY B 368 -1 N ASN B 363 O THR B 379 SHEET 4 G 4 PHE B 333 LEU B 337 1 N PHE B 333 O PHE B 364 SHEET 1 H 2 TRP B 255 PHE B 260 0 SHEET 2 H 2 ASN B 277 LEU B 282 -1 O ASN B 277 N PHE B 260 SHEET 1 I 5 ASP C 72 ASP C 75 0 SHEET 2 I 5 THR C 106 SER C 114 1 O VAL C 110 N ASP C 72 SHEET 3 I 5 GLU C 117 HIS C 125 -1 O TYR C 121 N GLN C 109 SHEET 4 I 5 THR C 22 THR C 30 -1 N LEU C 27 O ILE C 120 SHEET 5 I 5 GLN C 348 ALA C 355 -1 O GLU C 350 N ARG C 28 SHEET 1 J 2 ALA C 54 PHE C 56 0 SHEET 2 J 2 LEU C 62 TRP C 64 -1 O TYR C 63 N ARG C 55 SHEET 1 K 4 ALA C 208 VAL C 209 0 SHEET 2 K 4 LEU C 374 ASP C 381 -1 O ALA C 380 N VAL C 209 SHEET 3 K 4 ILE C 362 GLY C 368 -1 N ASN C 363 O THR C 379 SHEET 4 K 4 PHE C 333 LEU C 337 1 N PHE C 333 O PHE C 364 SHEET 1 L 2 TRP C 255 PHE C 260 0 SHEET 2 L 2 ASN C 277 LEU C 282 -1 O ASN C 277 N PHE C 260 CISPEP 1 SER A 331 PRO A 332 0 -0.33 CISPEP 2 SER B 331 PRO B 332 0 -0.14 CISPEP 3 SER C 331 PRO C 332 0 -0.19 CRYST1 132.595 161.349 115.602 90.00 104.81 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007542 0.000000 0.001994 0.00000 SCALE2 0.000000 0.006198 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008948 0.00000