HEADER HORMONE/GROWTH FACTOR 06-MAR-02 1L5C TITLE SOLUTION STRUCTURE OF THE MONOMERIC FORM OF A MUTANT UNLIGANDED BOVINE TITLE 2 NEUROPHYSIN, 20 STRUCTURES COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEUROPHYSIN 1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE)PLYS-S; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: T7 KEYWDS NMR ANALYSIS NEUROPHYSIN MONOMER, HORMONE-GROWTH FACTOR COMPLEX EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.L.NGUYEN,E.BRESLOW REVDAT 4 27-OCT-21 1L5C 1 REMARK SEQADV REVDAT 3 24-FEB-09 1L5C 1 VERSN REVDAT 2 15-MAY-02 1L5C 1 JRNL REVDAT 1 20-MAR-02 1L5C 0 JRNL AUTH T.L.NGUYEN,E.BRESLOW JRNL TITL NMR ANALYSIS OF THE MONOMERIC FORM OF A MUTANT UNLIGANDED JRNL TITL 2 BOVINE NEUROPHYSIN: COMPARISON WITH THE CRYSTAL STRUCTURE OF JRNL TITL 3 A NEUROPHYSIN DIMER. JRNL REF BIOCHEMISTRY V. 41 5920 2002 JRNL REFN ISSN 0006-2960 JRNL PMID 11980496 JRNL DOI 10.1021/BI012067K REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, CNS 0.9 REMARK 3 AUTHORS : BAX (NMRPIPE), BRUNGER (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON 811 NOE REMARK 3 -DERIVED DISTANCE CONSTRAINTS, 50 HYDROGEN BOND DISTANCE REMARK 3 RESTRAINTS, 72 TORSION ANGLE CONSTRAINTS, 46 JNHA COUPLING REMARK 3 CONSTANTS, 157 CA/CB AND 108 1H CHEMICAL SHIFT RESTRAINTS AND REMARK 3 THE PAIRING OF THE PROTEIN'S 7 DISULFIDES. REMARK 4 REMARK 4 1L5C COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-MAR-02. REMARK 100 THE DEPOSITION ID IS D_1000015654. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 283; 298; 303 REMARK 210 PH : 7.5; 7.5; 7.5 REMARK 210 IONIC STRENGTH : NULL; NULL; NULL REMARK 210 PRESSURE : AMBIENT; AMBIENT; AMBIENT REMARK 210 SAMPLE CONTENTS : 1.4 MM H80E OF BOVINE REMARK 210 NEUROPHYSIN I U-15N; 90% H2O, 10% REMARK 210 D20; 1.4 MM H80E OF BOVINE REMARK 210 NEUROPHYSIN I U-15N, 13C; 90% REMARK 210 H20, 10% D2O; 0.7 MM DES1-5 H80E REMARK 210 OF BOVINE NEUROPHYSIN I U-15N; REMARK 210 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; HNHA; REMARK 210 3D_13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW 4.1, CNS 0.9, TALOS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS A 59 H CYS A 67 1.48 REMARK 500 O ALA A 69 H ILE A 72 1.56 REMARK 500 O ALA A 90 H SER A 92 1.59 REMARK 500 O GLU A 80 OD2 ASP A 82 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 4 -76.57 -83.18 REMARK 500 1 LEU A 5 -136.56 -146.35 REMARK 500 1 ARG A 8 -164.76 -67.65 REMARK 500 1 THR A 9 98.30 46.75 REMARK 500 1 CYS A 10 -169.89 -50.56 REMARK 500 1 PRO A 12 -169.75 -62.55 REMARK 500 1 PHE A 22 -101.98 -120.96 REMARK 500 1 PRO A 24 -119.12 -99.70 REMARK 500 1 LEU A 32 33.17 -157.84 REMARK 500 1 LEU A 42 -19.15 -47.87 REMARK 500 1 ASN A 48 20.35 -141.14 REMARK 500 1 PRO A 51 100.16 -45.69 REMARK 500 1 PRO A 60 159.41 -40.01 REMARK 500 1 SER A 63 57.29 -90.27 REMARK 500 1 ALA A 68 -96.10 -159.97 REMARK 500 1 ALA A 69 -169.81 -75.90 REMARK 500 1 ALA A 70 97.46 -38.16 REMARK 500 1 GLU A 81 94.29 -61.92 REMARK 500 1 PRO A 83 -3.25 -59.83 REMARK 500 1 ASP A 86 -26.15 171.18 REMARK 500 1 PRO A 87 -70.46 -103.10 REMARK 500 1 ALA A 89 -157.60 -75.67 REMARK 500 1 ALA A 90 -178.32 -69.79 REMARK 500 2 ASP A 4 -122.69 -81.33 REMARK 500 2 LEU A 5 -139.44 -94.97 REMARK 500 2 THR A 9 74.38 -173.35 REMARK 500 2 CYS A 10 -75.15 -65.49 REMARK 500 2 PHE A 22 -69.52 -138.99 REMARK 500 2 LEU A 32 35.72 -154.24 REMARK 500 2 TYR A 49 44.88 -160.30 REMARK 500 2 PRO A 51 179.24 -48.43 REMARK 500 2 CYS A 54 -164.54 -119.33 REMARK 500 2 GLN A 55 175.32 53.03 REMARK 500 2 PRO A 60 155.61 -37.23 REMARK 500 2 SER A 63 54.55 -90.34 REMARK 500 2 ALA A 68 -94.57 -165.76 REMARK 500 2 ALA A 69 -169.70 -77.46 REMARK 500 2 ALA A 70 96.21 -39.07 REMARK 500 2 GLU A 81 93.14 -65.89 REMARK 500 2 ASP A 86 -26.33 171.67 REMARK 500 2 PRO A 87 -70.31 -102.18 REMARK 500 2 ALA A 89 -157.81 -76.19 REMARK 500 3 ASP A 4 -136.27 -82.04 REMARK 500 3 LEU A 5 -124.50 -94.87 REMARK 500 3 ARG A 8 -162.98 -74.80 REMARK 500 3 THR A 9 103.07 41.38 REMARK 500 3 CYS A 10 -83.84 -63.66 REMARK 500 3 PRO A 12 -175.75 -68.69 REMARK 500 3 LEU A 32 31.49 -144.16 REMARK 500 3 THR A 38 -168.24 -70.13 REMARK 500 REMARK 500 THIS ENTRY HAS 413 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1NPO RELATED DB: PDB REMARK 900 BOVINE NEUROPHYSIN II COMPLEX WITH OXYTOCIN REMARK 900 RELATED ID: 2BN2 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF BOVINE NEUROPHYSIN II COMPLEXED WITH THE REMARK 900 VASOPRESSIN ANALOGUE PHE-TYR AMIDE REMARK 900 RELATED ID: 1L5D RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF THE MONOMERIC FORM OF A MUTANT UNLIGANDED REMARK 900 BOVINE NEUROPHYSIN, MINIMIZED AVERAGE STRUCTURE DBREF 1L5C A 1 92 UNP P01175 NEU1_BOVIN 32 123 SEQADV 1L5C GLU A 80 UNP P01175 HIS 111 ENGINEERED MUTATION SEQRES 1 A 92 ALA VAL LEU ASP LEU ASP VAL ARG THR CYS LEU PRO CYS SEQRES 2 A 92 GLY PRO GLY GLY LYS GLY ARG CYS PHE GLY PRO SER ILE SEQRES 3 A 92 CYS CYS GLY ASP GLU LEU GLY CYS PHE VAL GLY THR ALA SEQRES 4 A 92 GLU ALA LEU ARG CYS GLN GLU GLU ASN TYR LEU PRO SER SEQRES 5 A 92 PRO CYS GLN SER GLY GLN LYS PRO CYS GLY SER GLY GLY SEQRES 6 A 92 ARG CYS ALA ALA ALA GLY ILE CYS CYS SER PRO ASP GLY SEQRES 7 A 92 CYS GLU GLU ASP PRO ALA CYS ASP PRO GLU ALA ALA PHE SEQRES 8 A 92 SER HELIX 1 1 THR A 38 TYR A 49 5 12 SHEET 1 A 2 PRO A 12 CYS A 13 0 SHEET 2 A 2 GLY A 19 ARG A 20 -1 O GLY A 19 N CYS A 13 SHEET 1 B 2 CYS A 27 GLY A 29 0 SHEET 2 B 2 LEU A 32 PHE A 35 -1 O GLY A 33 N GLY A 29 SHEET 1 C 4 PRO A 60 CYS A 61 0 SHEET 2 C 4 GLY A 65 CYS A 67 -1 O GLY A 65 N CYS A 61 SHEET 3 C 4 GLY A 71 CYS A 74 -1 O CYS A 74 N ARG A 66 SHEET 4 C 4 CYS A 79 CYS A 85 -1 O GLU A 80 N CYS A 73 SSBOND 1 CYS A 10 CYS A 54 1555 1555 2.03 SSBOND 2 CYS A 13 CYS A 27 1555 1555 2.02 SSBOND 3 CYS A 21 CYS A 44 1555 1555 2.03 SSBOND 4 CYS A 28 CYS A 34 1555 1555 2.02 SSBOND 5 CYS A 61 CYS A 73 1555 1555 2.03 SSBOND 6 CYS A 67 CYS A 85 1555 1555 2.03 SSBOND 7 CYS A 74 CYS A 79 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1