HEADER VIRAL PROTEIN 26-MAR-02 1L9V TITLE NON STRUCTURAL PROTEIN ENCODED BY GENE SEGMENT 8 OF ROTAVIRUS (NSP2), TITLE 2 AN NTPASE, SSRNA BINDING AND NUCLEIC ACID HELIX-DESTABILIZING PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ROTAVIRUS-NSP2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NSP2 OF ROTAVIRUS; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SIMIAN 11 ROTAVIRUS (SEROTYPE 3 / STRAIN SA11- SOURCE 3 RAMIG); SOURCE 4 ORGANISM_TAXID: 36435; SOURCE 5 STRAIN: SA11-RAMIG; SOURCE 6 GENE: GENE SEGMENT 8; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: M15[PREP5]; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PQE60 (QIAGEN) KEYWDS ALPHA/BETA PROTEIN, HIT-LIKE FOLD, OCTAMER, TWO DOMAIN PROTEIN, VIRAL KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.JAYARAM,Z.TARAPOREWALA,J.T.PATTON,B.V.PRASAD REVDAT 5 14-FEB-24 1L9V 1 REMARK REVDAT 4 13-JUL-11 1L9V 1 VERSN REVDAT 3 24-FEB-09 1L9V 1 VERSN REVDAT 2 25-JUL-06 1L9V 1 REMARK REVDAT 1 05-JUN-02 1L9V 0 JRNL AUTH H.JAYARAM,Z.TARAPOREWALA,J.T.PATTON,B.V.PRASAD JRNL TITL ROTAVIRUS PROTEIN INVOLVED IN GENOME REPLICATION AND JRNL TITL 2 PACKAGING EXHIBITS A HIT-LIKE FOLD. JRNL REF NATURE V. 417 311 2002 JRNL REFN ISSN 0028-0836 JRNL PMID 12015608 JRNL DOI 10.1038/417311A REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : CNS_PARAM FILES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.34 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 196804.060 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.5 REMARK 3 NUMBER OF REFLECTIONS : 13324 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.241 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1347 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.008 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.76 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1839 REMARK 3 BIN R VALUE (WORKING SET) : 0.3350 REMARK 3 BIN FREE R VALUE : 0.4050 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 221 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.027 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2545 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 1 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.91000 REMARK 3 B22 (A**2) : -1.91000 REMARK 3 B33 (A**2) : 3.81000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.39 REMARK 3 ESD FROM SIGMAA (A) : 0.38 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.50 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.40 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.780 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 9.530 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 14.770; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 10.390; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 15.000; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 45.33 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1L9V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-APR-02. REMARK 100 THE DEPOSITION ID IS D_1000015777. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-FEB-01 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 7.25 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X8C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : TWO CRYSTAL MONOCHROMATOR (NON REMARK 200 -DISPERSIVE GEOMETRY) WITH REMARK 200 SI(111) CRYSTALS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75176 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.5 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 6000, 0.2 M MAGNESIUM ACETATE, REMARK 280 0.1M TRIS-HCL. PROTEIN BUFFER 0.2M MGCL2, 0.5 MM EDTA , 0.5 MM REMARK 280 DTT, 2MM TRIS-HCL PH7.2. 0.2 M MGCL2 WAS NECESSARY TO MAKE REMARK 280 PROTEIN MONODISPERSE. PROTEIN:PRECIPITANT RATIO 1:1. PLATE LIKE REMARK 280 CRYSTALS (0.08 MM X 0.2 MM X 0.2 MM)CRYSTALS GREW IN TWO TO REMARK 280 THREE WEEKS, PH 7.25, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 54.21600 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 54.21600 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 76.43850 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 54.21600 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 54.21600 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 76.43850 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 54.21600 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 54.21600 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 76.43850 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 54.21600 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 54.21600 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 76.43850 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 54.21600 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 54.21600 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 76.43850 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 54.21600 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 54.21600 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 76.43850 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 54.21600 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 54.21600 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 76.43850 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 54.21600 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 54.21600 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 76.43850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: OCTAMER - OBTAINED BY APPLYING I422 SYMMTERY REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 19910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 117150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 108.43200 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 108.43200 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 108.43200 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 108.43200 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 108.43200 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 6 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 108.43200 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 7 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 8 0.000000 -1.000000 0.000000 108.43200 REMARK 350 BIOMT2 8 -1.000000 0.000000 0.000000 108.43200 REMARK 350 BIOMT3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 314 REMARK 465 VAL A 315 REMARK 465 GLY A 316 REMARK 465 VAL A 317 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 250 NZ LYS A 250 2655 1.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 12 85.62 -69.69 REMARK 500 SER A 16 151.67 168.18 REMARK 500 LEU A 91 77.50 -105.10 REMARK 500 LYS A 92 90.60 -40.16 REMARK 500 GLN A 142 51.38 -118.66 REMARK 500 PHE A 159 131.29 -176.42 REMARK 500 ILE A 219 -161.11 -123.73 REMARK 500 SER A 247 12.40 -68.68 REMARK 500 VAL A 249 50.02 -68.63 REMARK 500 LYS A 250 83.93 -164.78 REMARK 500 THR A 251 138.07 -33.72 REMARK 500 VAL A 253 39.91 -83.84 REMARK 500 ASN A 254 104.21 -48.76 REMARK 500 LEU A 260 170.82 -48.28 REMARK 500 ASP A 261 119.66 -26.34 REMARK 500 MET A 293 -158.15 -132.13 REMARK 500 LYS A 294 -62.55 -147.44 REMARK 500 PRO A 295 -178.25 -52.52 REMARK 500 GLU A 296 24.50 45.78 REMARK 500 REMARK 500 REMARK: NULL DBREF 1L9V A 1 317 UNP Q03243 VN35_ROTSR 1 317 SEQRES 1 A 317 MET ALA GLU LEU ALA CYS PHE CYS TYR PRO HIS LEU GLU SEQRES 2 A 317 ASN ASP SER TYR LYS PHE ILE PRO PHE ASN ASN LEU ALA SEQRES 3 A 317 ILE LYS ALA MET LEU THR ALA LYS VAL ASP LYS LYS ASP SEQRES 4 A 317 MET ASP LYS PHE TYR ASP SER ILE ILE TYR GLY ILE ALA SEQRES 5 A 317 PRO PRO PRO GLN PHE LYS LYS ARG TYR ASN THR ASN ASP SEQRES 6 A 317 ASN SER ARG GLY MET ASN PHE GLU THR ILE MET PHE THR SEQRES 7 A 317 LYS VAL ALA MET LEU ILE CYS GLU ALA LEU ASN SER LEU SEQRES 8 A 317 LYS VAL THR GLN ALA ASN VAL SER ASN VAL LEU SER ARG SEQRES 9 A 317 VAL VAL SER ILE ARG HIS LEU GLU ASN LEU VAL ILE ARG SEQRES 10 A 317 LYS GLU ASN PRO GLN ASP ILE LEU PHE HIS SER LYS ASP SEQRES 11 A 317 LEU LEU LEU LYS SER THR LEU ILE ALA ILE GLY GLN SER SEQRES 12 A 317 LYS GLU ILE GLU THR THR ILE THR ALA GLU GLY GLY GLU SEQRES 13 A 317 ILE VAL PHE GLN ASN ALA ALA PHE THR MET TRP LYS LEU SEQRES 14 A 317 THR TYR LEU GLU HIS GLN LEU MET PRO ILE LEU ASP GLN SEQRES 15 A 317 ASN PHE ILE GLU TYR LYS VAL THR LEU ASN GLU ASP LYS SEQRES 16 A 317 PRO ILE SER ASP VAL HIS VAL LYS GLU LEU VAL ALA GLU SEQRES 17 A 317 LEU ARG TRP GLN TYR ASN LYS PHE ALA VAL ILE THR HIS SEQRES 18 A 317 GLY LYS GLY HIS TYR ARG ILE VAL LYS TYR SER SER VAL SEQRES 19 A 317 ALA ASN HIS ALA ASP ARG VAL TYR ALA THR PHE LYS SER SEQRES 20 A 317 ASN VAL LYS THR GLY VAL ASN ASN ASP PHE ASN LEU LEU SEQRES 21 A 317 ASP GLN ARG ILE ILE TRP GLN ASN TRP TYR ALA PHE THR SEQRES 22 A 317 SER SER MET LYS GLN GLY ASN THR LEU ASP VAL CYS LYS SEQRES 23 A 317 ARG LEU LEU PHE GLN LYS MET LYS PRO GLU LYS ASN PRO SEQRES 24 A 317 PHE LYS GLY LEU SER THR ASP ARG LYS MET ASP GLU VAL SEQRES 25 A 317 SER GLN VAL GLY VAL FORMUL 2 HOH *(H2 O) HELIX 1 1 GLU A 3 CYS A 6 5 4 HELIX 2 2 ASN A 23 LEU A 31 1 9 HELIX 3 3 ASP A 36 MET A 40 5 5 HELIX 4 4 PRO A 54 TYR A 61 5 8 HELIX 5 5 THR A 74 ASN A 89 1 16 HELIX 6 6 THR A 94 ARG A 104 1 11 HELIX 7 7 SER A 107 GLU A 119 1 13 HELIX 8 8 ASP A 123 SER A 128 1 6 HELIX 9 9 SER A 128 ILE A 140 1 13 HELIX 10 10 THR A 170 HIS A 174 5 5 HELIX 11 11 SER A 198 TYR A 213 1 16 HELIX 12 12 TYR A 231 SER A 247 1 17 HELIX 13 13 TRP A 266 GLY A 279 1 14 HELIX 14 14 THR A 281 GLN A 291 1 11 HELIX 15 15 GLY A 302 SER A 313 1 12 SHEET 1 A 2 CYS A 8 GLU A 13 0 SHEET 2 A 2 SER A 16 PRO A 21 -1 O ILE A 20 N TYR A 9 SHEET 1 B 2 TYR A 44 ASP A 45 0 SHEET 2 B 2 ILE A 51 ALA A 52 -1 O ALA A 52 N TYR A 44 SHEET 1 C 5 GLU A 156 GLN A 160 0 SHEET 2 C 5 PHE A 164 LYS A 168 -1 O MET A 166 N PHE A 159 SHEET 3 C 5 GLU A 186 LEU A 191 -1 O LYS A 188 N TRP A 167 SHEET 4 C 5 TYR A 226 LYS A 230 -1 O ILE A 228 N TYR A 187 SHEET 5 C 5 PHE A 216 THR A 220 -1 N ALA A 217 O VAL A 229 CRYST1 108.432 108.432 152.877 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009222 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009222 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006541 0.00000