data_1LAF # _entry.id 1LAF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1LAF pdb_00001laf 10.2210/pdb1laf/pdb WWPDB D_1000174629 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1995-07-10 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-11-29 5 'Structure model' 1 4 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Derived calculations' 4 4 'Structure model' Other 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_database_status 2 4 'Structure model' struct_conf 3 4 'Structure model' struct_conf_type 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' database_2 7 5 'Structure model' pdbx_entry_details 8 5 'Structure model' pdbx_modification_feature 9 5 'Structure model' struct_ref_seq_dif 10 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_database_status.process_site' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_struct_ref_seq_dif.details' 5 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1LAF _pdbx_database_status.recvd_initial_deposition_date 1993-10-06 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kim, S.-H.' 1 'Oh, B.-H.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structural basis for multiple ligand specificity of the periplasmic lysine-, arginine-, ornithine-binding protein.' J.Biol.Chem. 269 26323 26330 1994 JBCHA3 US 0021-9258 0071 ? 7929349 ? 1 'Three-Dimensional Structures of the Periplasmic Lysine-, Arginine-, Ornithine-Binding Protein with and without a Ligand' J.Biol.Chem. 268 11348 ? 1993 JBCHA3 US 0021-9258 0071 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Oh, B.H.' 1 ? primary 'Ames, G.F.' 2 ? primary 'Kim, S.H.' 3 ? 1 'Oh, B.-H.' 4 ? 1 'Pandit, J.' 5 ? 1 'Kang, C.-H.' 6 ? 1 'Nikaido, K.' 7 ? 1 'Gokcen, S.' 8 ? 1 'Ames, G.F.-L.' 9 ? 1 'Kim, S.-H.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'LYSINE, ARGININE, ORNITHINE-BINDING PROTEIN' 26058.314 1 ? ? ? ? 2 non-polymer syn ARGININE 175.209 1 ? ? ? ? 3 water nat water 18.015 106 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ALPQTVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQE IAFSDKLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVDVVAYANQDLIYSDLTAGRLDAALQ DEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDDTELKAAFDKALTELRQDGTYDKMAKKYFDFNVYGD ; _entity_poly.pdbx_seq_one_letter_code_can ;ALPQTVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQE IAFSDKLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVDVVAYANQDLIYSDLTAGRLDAALQ DEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDDTELKAAFDKALTELRQDGTYDKMAKKYFDFNVYGD ; _entity_poly.pdbx_strand_id E _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ARGININE ARG 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 LEU n 1 3 PRO n 1 4 GLN n 1 5 THR n 1 6 VAL n 1 7 ARG n 1 8 ILE n 1 9 GLY n 1 10 THR n 1 11 ASP n 1 12 THR n 1 13 THR n 1 14 TYR n 1 15 ALA n 1 16 PRO n 1 17 PHE n 1 18 SER n 1 19 SER n 1 20 LYS n 1 21 ASP n 1 22 ALA n 1 23 LYS n 1 24 GLY n 1 25 GLU n 1 26 PHE n 1 27 ILE n 1 28 GLY n 1 29 PHE n 1 30 ASP n 1 31 ILE n 1 32 ASP n 1 33 LEU n 1 34 GLY n 1 35 ASN n 1 36 GLU n 1 37 MET n 1 38 CYS n 1 39 LYS n 1 40 ARG n 1 41 MET n 1 42 GLN n 1 43 VAL n 1 44 LYS n 1 45 CYS n 1 46 THR n 1 47 TRP n 1 48 VAL n 1 49 ALA n 1 50 SER n 1 51 ASP n 1 52 PHE n 1 53 ASP n 1 54 ALA n 1 55 LEU n 1 56 ILE n 1 57 PRO n 1 58 SER n 1 59 LEU n 1 60 LYS n 1 61 ALA n 1 62 LYS n 1 63 LYS n 1 64 ILE n 1 65 ASP n 1 66 ALA n 1 67 ILE n 1 68 ILE n 1 69 SER n 1 70 SER n 1 71 LEU n 1 72 SER n 1 73 ILE n 1 74 THR n 1 75 ASP n 1 76 LYS n 1 77 ARG n 1 78 GLN n 1 79 GLN n 1 80 GLU n 1 81 ILE n 1 82 ALA n 1 83 PHE n 1 84 SER n 1 85 ASP n 1 86 LYS n 1 87 LEU n 1 88 TYR n 1 89 ALA n 1 90 ALA n 1 91 ASP n 1 92 SER n 1 93 ARG n 1 94 LEU n 1 95 ILE n 1 96 ALA n 1 97 ALA n 1 98 LYS n 1 99 GLY n 1 100 SER n 1 101 PRO n 1 102 ILE n 1 103 GLN n 1 104 PRO n 1 105 THR n 1 106 LEU n 1 107 GLU n 1 108 SER n 1 109 LEU n 1 110 LYS n 1 111 GLY n 1 112 LYS n 1 113 HIS n 1 114 VAL n 1 115 GLY n 1 116 VAL n 1 117 LEU n 1 118 GLN n 1 119 GLY n 1 120 SER n 1 121 THR n 1 122 GLN n 1 123 GLU n 1 124 ALA n 1 125 TYR n 1 126 ALA n 1 127 ASN n 1 128 ASP n 1 129 ASN n 1 130 TRP n 1 131 ARG n 1 132 THR n 1 133 LYS n 1 134 GLY n 1 135 VAL n 1 136 ASP n 1 137 VAL n 1 138 VAL n 1 139 ALA n 1 140 TYR n 1 141 ALA n 1 142 ASN n 1 143 GLN n 1 144 ASP n 1 145 LEU n 1 146 ILE n 1 147 TYR n 1 148 SER n 1 149 ASP n 1 150 LEU n 1 151 THR n 1 152 ALA n 1 153 GLY n 1 154 ARG n 1 155 LEU n 1 156 ASP n 1 157 ALA n 1 158 ALA n 1 159 LEU n 1 160 GLN n 1 161 ASP n 1 162 GLU n 1 163 VAL n 1 164 ALA n 1 165 ALA n 1 166 SER n 1 167 GLU n 1 168 GLY n 1 169 PHE n 1 170 LEU n 1 171 LYS n 1 172 GLN n 1 173 PRO n 1 174 ALA n 1 175 GLY n 1 176 LYS n 1 177 GLU n 1 178 TYR n 1 179 ALA n 1 180 PHE n 1 181 ALA n 1 182 GLY n 1 183 PRO n 1 184 SER n 1 185 VAL n 1 186 LYS n 1 187 ASP n 1 188 LYS n 1 189 LYS n 1 190 TYR n 1 191 PHE n 1 192 GLY n 1 193 ASP n 1 194 GLY n 1 195 THR n 1 196 GLY n 1 197 VAL n 1 198 GLY n 1 199 LEU n 1 200 ARG n 1 201 LYS n 1 202 ASP n 1 203 ASP n 1 204 THR n 1 205 GLU n 1 206 LEU n 1 207 LYS n 1 208 ALA n 1 209 ALA n 1 210 PHE n 1 211 ASP n 1 212 LYS n 1 213 ALA n 1 214 LEU n 1 215 THR n 1 216 GLU n 1 217 LEU n 1 218 ARG n 1 219 GLN n 1 220 ASP n 1 221 GLY n 1 222 THR n 1 223 TYR n 1 224 ASP n 1 225 LYS n 1 226 MET n 1 227 ALA n 1 228 LYS n 1 229 LYS n 1 230 TYR n 1 231 PHE n 1 232 ASP n 1 233 PHE n 1 234 ASN n 1 235 VAL n 1 236 TYR n 1 237 GLY n 1 238 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Salmonella _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Salmonella typhimurium' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 602 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA E . n A 1 2 LEU 2 2 2 LEU LEU E . n A 1 3 PRO 3 3 3 PRO PRO E . n A 1 4 GLN 4 4 4 GLN GLN E . n A 1 5 THR 5 5 5 THR THR E . n A 1 6 VAL 6 6 6 VAL VAL E . n A 1 7 ARG 7 7 7 ARG ARG E . n A 1 8 ILE 8 8 8 ILE ILE E . n A 1 9 GLY 9 9 9 GLY GLY E . n A 1 10 THR 10 10 10 THR THR E . n A 1 11 ASP 11 11 11 ASP ASP E . n A 1 12 THR 12 12 12 THR THR E . n A 1 13 THR 13 13 13 THR THR E . n A 1 14 TYR 14 14 14 TYR TYR E . n A 1 15 ALA 15 15 15 ALA ALA E . n A 1 16 PRO 16 16 16 PRO PRO E . n A 1 17 PHE 17 17 17 PHE PHE E . n A 1 18 SER 18 18 18 SER SER E . n A 1 19 SER 19 19 19 SER SER E . n A 1 20 LYS 20 20 20 LYS LYS E . n A 1 21 ASP 21 21 21 ASP ASP E . n A 1 22 ALA 22 22 22 ALA ALA E . n A 1 23 LYS 23 23 23 LYS LYS E . n A 1 24 GLY 24 24 24 GLY GLY E . n A 1 25 GLU 25 25 25 GLU GLU E . n A 1 26 PHE 26 26 26 PHE PHE E . n A 1 27 ILE 27 27 27 ILE ILE E . n A 1 28 GLY 28 28 28 GLY GLY E . n A 1 29 PHE 29 29 29 PHE PHE E . n A 1 30 ASP 30 30 30 ASP ASP E . n A 1 31 ILE 31 31 31 ILE ILE E . n A 1 32 ASP 32 32 32 ASP ASP E . n A 1 33 LEU 33 33 33 LEU LEU E . n A 1 34 GLY 34 34 34 GLY GLY E . n A 1 35 ASN 35 35 35 ASN ASN E . n A 1 36 GLU 36 36 36 GLU GLU E . n A 1 37 MET 37 37 37 MET MET E . n A 1 38 CYS 38 38 38 CYS CYS E . n A 1 39 LYS 39 39 39 LYS LYS E . n A 1 40 ARG 40 40 40 ARG ARG E . n A 1 41 MET 41 41 41 MET MET E . n A 1 42 GLN 42 42 42 GLN GLN E . n A 1 43 VAL 43 43 43 VAL VAL E . n A 1 44 LYS 44 44 44 LYS LYS E . n A 1 45 CYS 45 45 45 CYS CYS E . n A 1 46 THR 46 46 46 THR THR E . n A 1 47 TRP 47 47 47 TRP TRP E . n A 1 48 VAL 48 48 48 VAL VAL E . n A 1 49 ALA 49 49 49 ALA ALA E . n A 1 50 SER 50 50 50 SER SER E . n A 1 51 ASP 51 51 51 ASP ASP E . n A 1 52 PHE 52 52 52 PHE PHE E . n A 1 53 ASP 53 53 53 ASP ASP E . n A 1 54 ALA 54 54 54 ALA ALA E . n A 1 55 LEU 55 55 55 LEU LEU E . n A 1 56 ILE 56 56 56 ILE ILE E . n A 1 57 PRO 57 57 57 PRO PRO E . n A 1 58 SER 58 58 58 SER SER E . n A 1 59 LEU 59 59 59 LEU LEU E . n A 1 60 LYS 60 60 60 LYS LYS E . n A 1 61 ALA 61 61 61 ALA ALA E . n A 1 62 LYS 62 62 62 LYS LYS E . n A 1 63 LYS 63 63 63 LYS LYS E . n A 1 64 ILE 64 64 64 ILE ILE E . n A 1 65 ASP 65 65 65 ASP ASP E . n A 1 66 ALA 66 66 66 ALA ALA E . n A 1 67 ILE 67 67 67 ILE ILE E . n A 1 68 ILE 68 68 68 ILE ILE E . n A 1 69 SER 69 69 69 SER SER E . n A 1 70 SER 70 70 70 SER SER E . n A 1 71 LEU 71 71 71 LEU LEU E . n A 1 72 SER 72 72 72 SER SER E . n A 1 73 ILE 73 73 73 ILE ILE E . n A 1 74 THR 74 74 74 THR THR E . n A 1 75 ASP 75 75 75 ASP ASP E . n A 1 76 LYS 76 76 76 LYS LYS E . n A 1 77 ARG 77 77 77 ARG ARG E . n A 1 78 GLN 78 78 78 GLN GLN E . n A 1 79 GLN 79 79 79 GLN GLN E . n A 1 80 GLU 80 80 80 GLU GLU E . n A 1 81 ILE 81 81 81 ILE ILE E . n A 1 82 ALA 82 82 82 ALA ALA E . n A 1 83 PHE 83 83 83 PHE PHE E . n A 1 84 SER 84 84 84 SER SER E . n A 1 85 ASP 85 85 85 ASP ASP E . n A 1 86 LYS 86 86 86 LYS LYS E . n A 1 87 LEU 87 87 87 LEU LEU E . n A 1 88 TYR 88 88 88 TYR TYR E . n A 1 89 ALA 89 89 89 ALA ALA E . n A 1 90 ALA 90 90 90 ALA ALA E . n A 1 91 ASP 91 91 91 ASP ASP E . n A 1 92 SER 92 92 92 SER SER E . n A 1 93 ARG 93 93 93 ARG ARG E . n A 1 94 LEU 94 94 94 LEU LEU E . n A 1 95 ILE 95 95 95 ILE ILE E . n A 1 96 ALA 96 96 96 ALA ALA E . n A 1 97 ALA 97 97 97 ALA ALA E . n A 1 98 LYS 98 98 98 LYS LYS E . n A 1 99 GLY 99 99 99 GLY GLY E . n A 1 100 SER 100 100 100 SER SER E . n A 1 101 PRO 101 101 101 PRO PRO E . n A 1 102 ILE 102 102 102 ILE ILE E . n A 1 103 GLN 103 103 103 GLN GLN E . n A 1 104 PRO 104 104 104 PRO PRO E . n A 1 105 THR 105 105 105 THR THR E . n A 1 106 LEU 106 106 106 LEU LEU E . n A 1 107 GLU 107 107 107 GLU GLU E . n A 1 108 SER 108 108 108 SER SER E . n A 1 109 LEU 109 109 109 LEU LEU E . n A 1 110 LYS 110 110 110 LYS LYS E . n A 1 111 GLY 111 111 111 GLY GLY E . n A 1 112 LYS 112 112 112 LYS LYS E . n A 1 113 HIS 113 113 113 HIS HIS E . n A 1 114 VAL 114 114 114 VAL VAL E . n A 1 115 GLY 115 115 115 GLY GLY E . n A 1 116 VAL 116 116 116 VAL VAL E . n A 1 117 LEU 117 117 117 LEU LEU E . n A 1 118 GLN 118 118 118 GLN GLN E . n A 1 119 GLY 119 119 119 GLY GLY E . n A 1 120 SER 120 120 120 SER SER E . n A 1 121 THR 121 121 121 THR THR E . n A 1 122 GLN 122 122 122 GLN GLN E . n A 1 123 GLU 123 123 123 GLU GLU E . n A 1 124 ALA 124 124 124 ALA ALA E . n A 1 125 TYR 125 125 125 TYR TYR E . n A 1 126 ALA 126 126 126 ALA ALA E . n A 1 127 ASN 127 127 127 ASN ASN E . n A 1 128 ASP 128 128 128 ASP ASP E . n A 1 129 ASN 129 129 129 ASN ASN E . n A 1 130 TRP 130 130 130 TRP TRP E . n A 1 131 ARG 131 131 131 ARG ARG E . n A 1 132 THR 132 132 132 THR THR E . n A 1 133 LYS 133 133 133 LYS LYS E . n A 1 134 GLY 134 134 134 GLY GLY E . n A 1 135 VAL 135 135 135 VAL VAL E . n A 1 136 ASP 136 136 136 ASP ASP E . n A 1 137 VAL 137 137 137 VAL VAL E . n A 1 138 VAL 138 138 138 VAL VAL E . n A 1 139 ALA 139 139 139 ALA ALA E . n A 1 140 TYR 140 140 140 TYR TYR E . n A 1 141 ALA 141 141 141 ALA ALA E . n A 1 142 ASN 142 142 142 ASN ASN E . n A 1 143 GLN 143 143 143 GLN GLN E . n A 1 144 ASP 144 144 144 ASP ASP E . n A 1 145 LEU 145 145 145 LEU LEU E . n A 1 146 ILE 146 146 146 ILE ILE E . n A 1 147 TYR 147 147 147 TYR TYR E . n A 1 148 SER 148 148 148 SER SER E . n A 1 149 ASP 149 149 149 ASP ASP E . n A 1 150 LEU 150 150 150 LEU LEU E . n A 1 151 THR 151 151 151 THR THR E . n A 1 152 ALA 152 152 152 ALA ALA E . n A 1 153 GLY 153 153 153 GLY GLY E . n A 1 154 ARG 154 154 154 ARG ARG E . n A 1 155 LEU 155 155 155 LEU LEU E . n A 1 156 ASP 156 156 156 ASP ASP E . n A 1 157 ALA 157 157 157 ALA ALA E . n A 1 158 ALA 158 158 158 ALA ALA E . n A 1 159 LEU 159 159 159 LEU LEU E . n A 1 160 GLN 160 160 160 GLN GLN E . n A 1 161 ASP 161 161 161 ASP ASP E . n A 1 162 GLU 162 162 162 GLU GLU E . n A 1 163 VAL 163 163 163 VAL VAL E . n A 1 164 ALA 164 164 164 ALA ALA E . n A 1 165 ALA 165 165 165 ALA ALA E . n A 1 166 SER 166 166 166 SER SER E . n A 1 167 GLU 167 167 167 GLU GLU E . n A 1 168 GLY 168 168 168 GLY GLY E . n A 1 169 PHE 169 169 169 PHE PHE E . n A 1 170 LEU 170 170 170 LEU LEU E . n A 1 171 LYS 171 171 171 LYS LYS E . n A 1 172 GLN 172 172 172 GLN GLN E . n A 1 173 PRO 173 173 173 PRO PRO E . n A 1 174 ALA 174 174 174 ALA ALA E . n A 1 175 GLY 175 175 175 GLY GLY E . n A 1 176 LYS 176 176 176 LYS LYS E . n A 1 177 GLU 177 177 177 GLU GLU E . n A 1 178 TYR 178 178 178 TYR TYR E . n A 1 179 ALA 179 179 179 ALA ALA E . n A 1 180 PHE 180 180 180 PHE PHE E . n A 1 181 ALA 181 181 181 ALA ALA E . n A 1 182 GLY 182 182 182 GLY GLY E . n A 1 183 PRO 183 183 183 PRO PRO E . n A 1 184 SER 184 184 184 SER SER E . n A 1 185 VAL 185 185 185 VAL VAL E . n A 1 186 LYS 186 186 186 LYS LYS E . n A 1 187 ASP 187 187 187 ASP ASP E . n A 1 188 LYS 188 188 188 LYS LYS E . n A 1 189 LYS 189 189 189 LYS LYS E . n A 1 190 TYR 190 190 190 TYR TYR E . n A 1 191 PHE 191 191 191 PHE PHE E . n A 1 192 GLY 192 192 192 GLY GLY E . n A 1 193 ASP 193 193 193 ASP ASP E . n A 1 194 GLY 194 194 194 GLY GLY E . n A 1 195 THR 195 195 195 THR THR E . n A 1 196 GLY 196 196 196 GLY GLY E . n A 1 197 VAL 197 197 197 VAL VAL E . n A 1 198 GLY 198 198 198 GLY GLY E . n A 1 199 LEU 199 199 199 LEU LEU E . n A 1 200 ARG 200 200 200 ARG ARG E . n A 1 201 LYS 201 201 201 LYS LYS E . n A 1 202 ASP 202 202 202 ASP ASP E . n A 1 203 ASP 203 203 203 ASP ASP E . n A 1 204 THR 204 204 204 THR THR E . n A 1 205 GLU 205 205 205 GLU GLU E . n A 1 206 LEU 206 206 206 LEU LEU E . n A 1 207 LYS 207 207 207 LYS LYS E . n A 1 208 ALA 208 208 208 ALA ALA E . n A 1 209 ALA 209 209 209 ALA ALA E . n A 1 210 PHE 210 210 210 PHE PHE E . n A 1 211 ASP 211 211 211 ASP ASP E . n A 1 212 LYS 212 212 212 LYS LYS E . n A 1 213 ALA 213 213 213 ALA ALA E . n A 1 214 LEU 214 214 214 LEU LEU E . n A 1 215 THR 215 215 215 THR THR E . n A 1 216 GLU 216 216 216 GLU GLU E . n A 1 217 LEU 217 217 217 LEU LEU E . n A 1 218 ARG 218 218 218 ARG ARG E . n A 1 219 GLN 219 219 219 GLN GLN E . n A 1 220 ASP 220 220 220 ASP ASP E . n A 1 221 GLY 221 221 221 GLY GLY E . n A 1 222 THR 222 222 222 THR THR E . n A 1 223 TYR 223 223 223 TYR TYR E . n A 1 224 ASP 224 224 224 ASP ASP E . n A 1 225 LYS 225 225 225 LYS LYS E . n A 1 226 MET 226 226 226 MET MET E . n A 1 227 ALA 227 227 227 ALA ALA E . n A 1 228 LYS 228 228 228 LYS LYS E . n A 1 229 LYS 229 229 229 LYS LYS E . n A 1 230 TYR 230 230 230 TYR TYR E . n A 1 231 PHE 231 231 231 PHE PHE E . n A 1 232 ASP 232 232 232 ASP ASP E . n A 1 233 PHE 233 233 233 PHE PHE E . n A 1 234 ASN 234 234 234 ASN ASN E . n A 1 235 VAL 235 235 235 VAL VAL E . n A 1 236 TYR 236 236 236 TYR TYR E . n A 1 237 GLY 237 237 237 GLY GLY E . n A 1 238 ASP 238 238 238 ASP ASP E . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ARG 1 240 240 ARG ARG E . C 3 HOH 1 401 401 HOH HOH E . C 3 HOH 2 402 402 HOH HOH E . C 3 HOH 3 403 403 HOH HOH E . C 3 HOH 4 404 404 HOH HOH E . C 3 HOH 5 405 405 HOH HOH E . C 3 HOH 6 406 406 HOH HOH E . C 3 HOH 7 407 407 HOH HOH E . C 3 HOH 8 408 408 HOH HOH E . C 3 HOH 9 409 409 HOH HOH E . C 3 HOH 10 410 410 HOH HOH E . C 3 HOH 11 411 411 HOH HOH E . C 3 HOH 12 412 412 HOH HOH E . C 3 HOH 13 413 413 HOH HOH E . C 3 HOH 14 414 414 HOH HOH E . C 3 HOH 15 415 415 HOH HOH E . C 3 HOH 16 416 416 HOH HOH E . C 3 HOH 17 417 417 HOH HOH E . C 3 HOH 18 418 418 HOH HOH E . C 3 HOH 19 419 419 HOH HOH E . C 3 HOH 20 420 420 HOH HOH E . C 3 HOH 21 421 421 HOH HOH E . C 3 HOH 22 422 422 HOH HOH E . C 3 HOH 23 423 423 HOH HOH E . C 3 HOH 24 424 424 HOH HOH E . C 3 HOH 25 425 425 HOH HOH E . C 3 HOH 26 426 426 HOH HOH E . C 3 HOH 27 427 427 HOH HOH E . C 3 HOH 28 428 428 HOH HOH E . C 3 HOH 29 429 429 HOH HOH E . C 3 HOH 30 430 430 HOH HOH E . C 3 HOH 31 431 431 HOH HOH E . C 3 HOH 32 432 432 HOH HOH E . C 3 HOH 33 433 433 HOH HOH E . C 3 HOH 34 434 434 HOH HOH E . C 3 HOH 35 435 435 HOH HOH E . C 3 HOH 36 436 436 HOH HOH E . C 3 HOH 37 437 437 HOH HOH E . C 3 HOH 38 438 438 HOH HOH E . C 3 HOH 39 439 439 HOH HOH E . C 3 HOH 40 440 440 HOH HOH E . C 3 HOH 41 441 441 HOH HOH E . C 3 HOH 42 442 442 HOH HOH E . C 3 HOH 43 443 443 HOH HOH E . C 3 HOH 44 444 444 HOH HOH E . C 3 HOH 45 445 445 HOH HOH E . C 3 HOH 46 446 446 HOH HOH E . C 3 HOH 47 447 447 HOH HOH E . C 3 HOH 48 448 448 HOH HOH E . C 3 HOH 49 449 449 HOH HOH E . C 3 HOH 50 450 450 HOH HOH E . C 3 HOH 51 451 451 HOH HOH E . C 3 HOH 52 452 452 HOH HOH E . C 3 HOH 53 453 453 HOH HOH E . C 3 HOH 54 454 454 HOH HOH E . C 3 HOH 55 455 455 HOH HOH E . C 3 HOH 56 456 456 HOH HOH E . C 3 HOH 57 457 457 HOH HOH E . C 3 HOH 58 458 458 HOH HOH E . C 3 HOH 59 459 459 HOH HOH E . C 3 HOH 60 460 460 HOH HOH E . C 3 HOH 61 461 461 HOH HOH E . C 3 HOH 62 462 462 HOH HOH E . C 3 HOH 63 463 463 HOH HOH E . C 3 HOH 64 464 464 HOH HOH E . C 3 HOH 65 465 465 HOH HOH E . C 3 HOH 66 466 466 HOH HOH E . C 3 HOH 67 467 467 HOH HOH E . C 3 HOH 68 468 468 HOH HOH E . C 3 HOH 69 469 469 HOH HOH E . C 3 HOH 70 470 470 HOH HOH E . C 3 HOH 71 471 471 HOH HOH E . C 3 HOH 72 472 472 HOH HOH E . C 3 HOH 73 473 473 HOH HOH E . C 3 HOH 74 474 474 HOH HOH E . C 3 HOH 75 475 475 HOH HOH E . C 3 HOH 76 476 476 HOH HOH E . C 3 HOH 77 477 477 HOH HOH E . C 3 HOH 78 478 478 HOH HOH E . C 3 HOH 79 479 479 HOH HOH E . C 3 HOH 80 480 480 HOH HOH E . C 3 HOH 81 481 481 HOH HOH E . C 3 HOH 82 482 482 HOH HOH E . C 3 HOH 83 483 483 HOH HOH E . C 3 HOH 84 484 484 HOH HOH E . C 3 HOH 85 485 485 HOH HOH E . C 3 HOH 86 486 486 HOH HOH E . C 3 HOH 87 487 487 HOH HOH E . C 3 HOH 88 488 488 HOH HOH E . C 3 HOH 89 489 489 HOH HOH E . C 3 HOH 90 490 490 HOH HOH E . C 3 HOH 91 491 491 HOH HOH E . C 3 HOH 92 492 492 HOH HOH E . C 3 HOH 93 493 493 HOH HOH E . C 3 HOH 94 494 494 HOH HOH E . C 3 HOH 95 495 495 HOH HOH E . C 3 HOH 96 496 496 HOH HOH E . C 3 HOH 97 497 497 HOH HOH E . C 3 HOH 98 498 498 HOH HOH E . C 3 HOH 99 499 499 HOH HOH E . C 3 HOH 100 500 500 HOH HOH E . C 3 HOH 101 501 501 HOH HOH E . C 3 HOH 102 502 502 HOH HOH E . C 3 HOH 103 503 503 HOH HOH E . C 3 HOH 104 504 504 HOH HOH E . C 3 HOH 105 505 505 HOH HOH E . C 3 HOH 106 506 506 HOH HOH E . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 E GLN 4 ? CG ? A GLN 4 CG 2 1 Y 1 E GLN 4 ? CD ? A GLN 4 CD 3 1 Y 1 E GLN 4 ? OE1 ? A GLN 4 OE1 4 1 Y 1 E GLN 4 ? NE2 ? A GLN 4 NE2 5 1 Y 1 E LYS 110 ? CG ? A LYS 110 CG 6 1 Y 1 E LYS 110 ? CD ? A LYS 110 CD 7 1 Y 1 E LYS 110 ? CE ? A LYS 110 CE 8 1 Y 1 E LYS 110 ? NZ ? A LYS 110 NZ 9 1 Y 1 E LYS 176 ? CG ? A LYS 176 CG 10 1 Y 1 E LYS 176 ? CD ? A LYS 176 CD 11 1 Y 1 E LYS 176 ? CE ? A LYS 176 CE 12 1 Y 1 E LYS 176 ? NZ ? A LYS 176 NZ 13 1 Y 1 E GLU 177 ? CG ? A GLU 177 CG 14 1 Y 1 E GLU 177 ? CD ? A GLU 177 CD 15 1 Y 1 E GLU 177 ? OE1 ? A GLU 177 OE1 16 1 Y 1 E GLU 177 ? OE2 ? A GLU 177 OE2 17 1 Y 1 E LYS 188 ? CG ? A LYS 188 CG 18 1 Y 1 E LYS 188 ? CD ? A LYS 188 CD 19 1 Y 1 E LYS 188 ? CE ? A LYS 188 CE 20 1 Y 1 E LYS 188 ? NZ ? A LYS 188 NZ 21 1 Y 1 E LYS 189 ? CG ? A LYS 189 CG 22 1 Y 1 E LYS 189 ? CD ? A LYS 189 CD 23 1 Y 1 E LYS 189 ? CE ? A LYS 189 CE 24 1 Y 1 E LYS 189 ? NZ ? A LYS 189 NZ 25 1 Y 1 E LYS 228 ? CG ? A LYS 228 CG 26 1 Y 1 E LYS 228 ? CD ? A LYS 228 CD 27 1 Y 1 E LYS 228 ? CE ? A LYS 228 CE 28 1 Y 1 E LYS 228 ? NZ ? A LYS 228 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement . ? 2 X-PLOR phasing . ? 3 # _cell.entry_id 1LAF _cell.length_a 37.790 _cell.length_b 59.630 _cell.length_c 115.930 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LAF _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 1LAF _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.51 _exptl_crystal.density_percent_sol 50.91 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1LAF _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6. _refine.ls_d_res_high 2.06 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.161 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.161 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1818 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 106 _refine_hist.number_atoms_total 1924 _refine_hist.d_res_high 2.06 _refine_hist.d_res_low 6. # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 2.67 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.29 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1LAF _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1LAF _struct.title 'STRUCTURAL BASES FOR MULTIPLE LIGAND SPECIFICITY OF THE PERIPLASMIC LYSINE-, ARGININE-, ORNITHINE-BINDING PROTEIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1LAF _struct_keywords.pdbx_keywords 'AMINO ACID TRANSPORT' _struct_keywords.text 'AMINO ACID TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ARGT_SALTY _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P02911 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MKKTVLALSLLIGLGATAASYAALPQTVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMCKRMQVKCTWVASDFDALIPS LKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAKGSPVQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVDVV AYANQDLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDDTELKAAFDKALTELR QDGTYDKMAKKYFDFNVYGD ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1LAF _struct_ref_seq.pdbx_strand_id E _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 238 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02911 _struct_ref_seq.db_align_beg 23 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 260 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 238 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1LAF _struct_ref_seq_dif.mon_id ILE _struct_ref_seq_dif.pdbx_pdb_strand_id E _struct_ref_seq_dif.seq_num 102 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P02911 _struct_ref_seq_dif.db_mon_id VAL _struct_ref_seq_dif.pdbx_seq_db_seq_num 124 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 102 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 A PHE A 29 ? MET A 41 ? PHE E 29 MET E 41 1 ? 13 HELX_P HELX_P2 B LEU A 55 ? LYS A 60 ? LEU E 55 LYS E 60 1 ? 6 HELX_P HELX_P3 C ASP A 75 ? GLU A 80 ? ASP E 75 GLU E 80 1 ? 6 HELX_P HELX_P4 D LEU A 106 ? LEU A 109 ? LEU E 106 LEU E 109 1 ? 4 HELX_P HELX_P5 E THR A 121 ? ASN A 129 ? THR E 121 ASN E 129 1 ? 9 HELX_P HELX_P6 F GLN A 143 ? THR A 151 ? GLN E 143 THR E 151 1 ? 9 HELX_P HELX_P7 G GLU A 162 ? GLY A 168 ? GLU E 162 GLY E 168 1 ? 7 HELX_P HELX_P8 H LYS A 188 ? PHE A 191 ? LYS E 188 PHE E 191 1 ? 4 HELX_P HELX_P9 I THR A 204 ? GLN A 219 ? THR E 204 GLN E 219 1 ? 16 HELX_P HELX_P10 J THR A 222 ? LYS A 228 ? THR E 222 LYS E 228 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 38 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 45 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id E _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 38 _struct_conn.ptnr2_auth_asym_id E _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 45 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.304 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CYS _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 38 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 45 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id CYS _pdbx_modification_feature.auth_asym_id E _pdbx_modification_feature.auth_seq_id 38 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id E _pdbx_modification_feature.modified_residue_auth_seq_id 45 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom SG _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id . _pdbx_modification_feature.ref_pcm_id . _pdbx_modification_feature.ref_comp_id . _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Disulfide bridge' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ALA _struct_mon_prot_cis.label_seq_id 15 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ALA _struct_mon_prot_cis.auth_seq_id 15 _struct_mon_prot_cis.auth_asym_id E _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 16 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 16 _struct_mon_prot_cis.pdbx_auth_asym_id_2 E _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 6.70 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details S1 ? 5 ? S2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense S1 1 2 ? parallel S1 2 3 ? parallel S1 3 4 ? anti-parallel S1 4 5 ? parallel S2 1 2 ? parallel S2 2 3 ? parallel S2 3 4 ? anti-parallel S2 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id S1 1 LYS A 44 ? ALA A 49 ? LYS E 44 ALA E 49 S1 2 THR A 5 ? THR A 10 ? THR E 5 THR E 10 S1 3 ALA A 66 ? ILE A 67 ? ALA E 66 ILE E 67 S1 4 VAL A 197 ? LEU A 199 ? VAL E 197 LEU E 199 S1 5 ALA A 82 ? SER A 84 ? ALA E 82 SER E 84 S2 1 ASP A 136 ? TYR A 140 ? ASP E 136 TYR E 140 S2 2 HIS A 113 ? LEU A 117 ? HIS E 113 LEU E 117 S2 3 ALA A 157 ? ASP A 161 ? ALA E 157 ASP E 161 S2 4 SER A 92 ? ALA A 97 ? SER E 92 ALA E 97 S2 5 TYR A 178 ? ALA A 181 ? TYR E 178 ALA E 181 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id E _struct_site.pdbx_auth_comp_id ARG _struct_site.pdbx_auth_seq_id 240 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 13 _struct_site.details 'BINDING SITE FOR RESIDUE ARG E 240' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 ASP A 11 ? ASP E 11 . ? 1_555 ? 2 AC1 13 TYR A 14 ? TYR E 14 . ? 1_555 ? 3 AC1 13 PHE A 52 ? PHE E 52 . ? 1_555 ? 4 AC1 13 SER A 69 ? SER E 69 . ? 1_555 ? 5 AC1 13 SER A 70 ? SER E 70 . ? 1_555 ? 6 AC1 13 SER A 72 ? SER E 72 . ? 1_555 ? 7 AC1 13 ARG A 77 ? ARG E 77 . ? 1_555 ? 8 AC1 13 LEU A 117 ? LEU E 117 . ? 1_555 ? 9 AC1 13 SER A 120 ? SER E 120 . ? 1_555 ? 10 AC1 13 THR A 121 ? THR E 121 . ? 1_555 ? 11 AC1 13 GLN A 122 ? GLN E 122 . ? 1_555 ? 12 AC1 13 ASP A 161 ? ASP E 161 . ? 1_555 ? 13 AC1 13 HOH C . ? HOH E 403 . ? 1_555 ? # _pdbx_entry_details.entry_id 1LAF _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 NE2 _pdbx_validate_rmsd_bond.auth_asym_id_1 E _pdbx_validate_rmsd_bond.auth_comp_id_1 HIS _pdbx_validate_rmsd_bond.auth_seq_id_1 113 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CD2 _pdbx_validate_rmsd_bond.auth_asym_id_2 E _pdbx_validate_rmsd_bond.auth_comp_id_2 HIS _pdbx_validate_rmsd_bond.auth_seq_id_2 113 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.300 _pdbx_validate_rmsd_bond.bond_target_value 1.373 _pdbx_validate_rmsd_bond.bond_deviation -0.073 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.011 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB E TYR 14 ? ? CG E TYR 14 ? ? CD2 E TYR 14 ? ? 117.36 121.00 -3.64 0.60 N 2 1 CD1 E TRP 47 ? ? CG E TRP 47 ? ? CD2 E TRP 47 ? ? 113.02 106.30 6.72 0.80 N 3 1 CG E TRP 47 ? ? CD1 E TRP 47 ? ? NE1 E TRP 47 ? ? 103.89 110.10 -6.21 1.00 N 4 1 CE2 E TRP 47 ? ? CD2 E TRP 47 ? ? CG E TRP 47 ? ? 101.39 107.30 -5.91 0.80 N 5 1 NE E ARG 93 ? ? CZ E ARG 93 ? ? NH2 E ARG 93 ? ? 117.25 120.30 -3.05 0.50 N 6 1 CD1 E TRP 130 ? ? CG E TRP 130 ? ? CD2 E TRP 130 ? ? 111.86 106.30 5.56 0.80 N 7 1 CE2 E TRP 130 ? ? CD2 E TRP 130 ? ? CG E TRP 130 ? ? 101.89 107.30 -5.41 0.80 N 8 1 NE E ARG 154 ? ? CZ E ARG 154 ? ? NH2 E ARG 154 ? ? 117.04 120.30 -3.26 0.50 N 9 1 CB E TYR 236 ? ? CG E TYR 236 ? ? CD2 E TYR 236 ? ? 117.19 121.00 -3.81 0.60 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR E 12 ? ? -85.96 38.85 2 1 SER E 69 ? ? -158.80 47.86 3 1 PHE E 169 ? ? -141.34 -55.98 4 1 ASP E 187 ? ? -163.84 104.01 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 1LAF _atom_sites.fract_transf_matrix[1][1] 0.026462 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016770 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008626 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_sites_footnote.id _atom_sites_footnote.text 1 'CIS PROLINE - PRO E 16' 2 ;THE FOLLOWING SEVEN RESIDUES HAVE BEEN MODELED AS ALANINE DUE TO THE ABSENCE OF ELECTRON DENSITY FOR THEIR SIDE CHAIN: GLN E 4, LYS E 110, LYS E 176, GLU E 177, LYS E 188, LYS E 189, AND LYS E 228. ; # loop_ _atom_type.symbol C N O S # loop_