data_1LB6 # _entry.id 1LB6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1LB6 pdb_00001lb6 10.2210/pdb1lb6/pdb RCSB RCSB015806 ? ? WWPDB D_1000015806 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-07-31 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 5 'Structure model' 1 4 2024-02-14 6 'Structure model' 1 5 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif 6 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1LB6 _pdbx_database_status.recvd_initial_deposition_date 2002-04-02 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1LB4 'TRAF6 apo structure' unspecified PDB 1LB5 'TRAF6-RANK complex' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ye, H.' 1 'Arron, J.R.' 2 'Lamothe, B.' 3 'Cirilli, M.' 4 'Kobayashi, T.' 5 'Shevde, N.K.' 6 'Segal, D.' 7 'Dzivenu, O.' 8 'Vologodskaia, M.' 9 'Yim, M.' 10 'Du, K.' 11 'Singh, S.' 12 'Pike, J.W.' 13 'Darnay, B.G.' 14 'Choi, Y.' 15 'Wu, H.' 16 # _citation.id primary _citation.title 'Distinct molecular mechanism for initiating TRAF6 signalling.' _citation.journal_abbrev Nature _citation.journal_volume 418 _citation.page_first 443 _citation.page_last 447 _citation.year 2002 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12140561 _citation.pdbx_database_id_DOI 10.1038/nature00888 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ye, H.' 1 ? primary 'Arron, J.R.' 2 ? primary 'Lamothe, B.' 3 ? primary 'Cirilli, M.' 4 ? primary 'Kobayashi, T.' 5 ? primary 'Shevde, N.K.' 6 ? primary 'Segal, D.' 7 ? primary 'Dzivenu, O.K.' 8 ? primary 'Vologodskaia, M.' 9 ? primary 'Yim, M.' 10 ? primary 'Du, K.' 11 ? primary 'Singh, S.' 12 ? primary 'Pike, J.W.' 13 ? primary 'Darnay, B.G.' 14 ? primary 'Choi, Y.' 15 ? primary 'Wu, H.' 16 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'TNF receptor-associated factor 6' 18676.549 1 ? ? 'residues 347-504' ? 2 polymer man 'CD40 antigen' 1134.214 1 ? ? 'residues 230-238' ? 3 water nat water 18.015 122 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;QQCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPF QGTIRLTILDQSEAPVRQNHEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDLE ; ;QQCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPF QGTIRLTILDQSEAPVRQNHEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDLE ; A ? 2 'polypeptide(L)' no no KQEPQEIDF KQEPQEIDF B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 GLN n 1 3 CYS n 1 4 ASN n 1 5 GLY n 1 6 ILE n 1 7 TYR n 1 8 ILE n 1 9 TRP n 1 10 LYS n 1 11 ILE n 1 12 GLY n 1 13 ASN n 1 14 PHE n 1 15 GLY n 1 16 MET n 1 17 HIS n 1 18 LEU n 1 19 LYS n 1 20 CYS n 1 21 GLN n 1 22 GLU n 1 23 GLU n 1 24 GLU n 1 25 LYS n 1 26 PRO n 1 27 VAL n 1 28 VAL n 1 29 ILE n 1 30 HIS n 1 31 SER n 1 32 PRO n 1 33 GLY n 1 34 PHE n 1 35 TYR n 1 36 THR n 1 37 GLY n 1 38 LYS n 1 39 PRO n 1 40 GLY n 1 41 TYR n 1 42 LYS n 1 43 LEU n 1 44 CYS n 1 45 MET n 1 46 ARG n 1 47 LEU n 1 48 HIS n 1 49 LEU n 1 50 GLN n 1 51 LEU n 1 52 PRO n 1 53 THR n 1 54 ALA n 1 55 GLN n 1 56 ARG n 1 57 CYS n 1 58 ALA n 1 59 ASN n 1 60 TYR n 1 61 ILE n 1 62 SER n 1 63 LEU n 1 64 PHE n 1 65 VAL n 1 66 HIS n 1 67 THR n 1 68 MET n 1 69 GLN n 1 70 GLY n 1 71 GLU n 1 72 TYR n 1 73 ASP n 1 74 SER n 1 75 HIS n 1 76 LEU n 1 77 PRO n 1 78 TRP n 1 79 PRO n 1 80 PHE n 1 81 GLN n 1 82 GLY n 1 83 THR n 1 84 ILE n 1 85 ARG n 1 86 LEU n 1 87 THR n 1 88 ILE n 1 89 LEU n 1 90 ASP n 1 91 GLN n 1 92 SER n 1 93 GLU n 1 94 ALA n 1 95 PRO n 1 96 VAL n 1 97 ARG n 1 98 GLN n 1 99 ASN n 1 100 HIS n 1 101 GLU n 1 102 GLU n 1 103 ILE n 1 104 MET n 1 105 ASP n 1 106 ALA n 1 107 LYS n 1 108 PRO n 1 109 GLU n 1 110 LEU n 1 111 LEU n 1 112 ALA n 1 113 PHE n 1 114 GLN n 1 115 ARG n 1 116 PRO n 1 117 THR n 1 118 ILE n 1 119 PRO n 1 120 ARG n 1 121 ASN n 1 122 PRO n 1 123 LYS n 1 124 GLY n 1 125 PHE n 1 126 GLY n 1 127 TYR n 1 128 VAL n 1 129 THR n 1 130 PHE n 1 131 MET n 1 132 HIS n 1 133 LEU n 1 134 GLU n 1 135 ALA n 1 136 LEU n 1 137 ARG n 1 138 GLN n 1 139 ARG n 1 140 THR n 1 141 PHE n 1 142 ILE n 1 143 LYS n 1 144 ASP n 1 145 ASP n 1 146 THR n 1 147 LEU n 1 148 LEU n 1 149 VAL n 1 150 ARG n 1 151 CYS n 1 152 GLU n 1 153 VAL n 1 154 SER n 1 155 THR n 1 156 ARG n 1 157 PHE n 1 158 ASP n 1 159 LEU n 1 160 GLU n 2 1 LYS n 2 2 GLN n 2 3 GLU n 2 4 PRO n 2 5 GLN n 2 6 GLU n 2 7 ILE n 2 8 ASP n 2 9 PHE n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human Homo TRAF6 ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? human Homo CD40 ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 347 347 GLN ALA A . n A 1 2 GLN 2 348 348 GLN GLN A . n A 1 3 CYS 3 349 349 CYS CYS A . n A 1 4 ASN 4 350 350 ASN ASN A . n A 1 5 GLY 5 351 351 GLY GLY A . n A 1 6 ILE 6 352 352 ILE ILE A . n A 1 7 TYR 7 353 353 TYR TYR A . n A 1 8 ILE 8 354 354 ILE ILE A . n A 1 9 TRP 9 355 355 TRP TRP A . n A 1 10 LYS 10 356 356 LYS LYS A . n A 1 11 ILE 11 357 357 ILE ILE A . n A 1 12 GLY 12 358 358 GLY GLY A . n A 1 13 ASN 13 359 359 ASN ASN A . n A 1 14 PHE 14 360 360 PHE PHE A . n A 1 15 GLY 15 361 361 GLY GLY A . n A 1 16 MET 16 362 362 MET MET A . n A 1 17 HIS 17 363 363 HIS HIS A . n A 1 18 LEU 18 364 364 LEU LEU A . n A 1 19 LYS 19 365 365 LYS LYS A . n A 1 20 CYS 20 366 366 CYS CYS A . n A 1 21 GLN 21 367 367 GLN GLN A . n A 1 22 GLU 22 368 368 GLU GLU A . n A 1 23 GLU 23 369 369 GLU GLU A . n A 1 24 GLU 24 370 370 GLU GLU A . n A 1 25 LYS 25 371 371 LYS LYS A . n A 1 26 PRO 26 372 372 PRO PRO A . n A 1 27 VAL 27 373 373 VAL VAL A . n A 1 28 VAL 28 374 374 VAL VAL A . n A 1 29 ILE 29 375 375 ILE ILE A . n A 1 30 HIS 30 376 376 HIS HIS A . n A 1 31 SER 31 377 377 SER SER A . n A 1 32 PRO 32 378 378 PRO PRO A . n A 1 33 GLY 33 379 379 GLY GLY A . n A 1 34 PHE 34 380 380 PHE PHE A . n A 1 35 TYR 35 381 381 TYR TYR A . n A 1 36 THR 36 382 382 THR THR A . n A 1 37 GLY 37 383 383 GLY GLY A . n A 1 38 LYS 38 384 384 LYS LYS A . n A 1 39 PRO 39 385 385 PRO PRO A . n A 1 40 GLY 40 386 386 GLY GLY A . n A 1 41 TYR 41 387 387 TYR TYR A . n A 1 42 LYS 42 388 388 LYS LYS A . n A 1 43 LEU 43 389 389 LEU LEU A . n A 1 44 CYS 44 390 390 CYS CYS A . n A 1 45 MET 45 391 391 MET MET A . n A 1 46 ARG 46 392 392 ARG ARG A . n A 1 47 LEU 47 393 393 LEU LEU A . n A 1 48 HIS 48 394 394 HIS HIS A . n A 1 49 LEU 49 395 395 LEU LEU A . n A 1 50 GLN 50 396 396 GLN GLN A . n A 1 51 LEU 51 397 397 LEU LEU A . n A 1 52 PRO 52 398 398 PRO PRO A . n A 1 53 THR 53 399 399 THR THR A . n A 1 54 ALA 54 400 400 ALA ALA A . n A 1 55 GLN 55 401 401 GLN GLN A . n A 1 56 ARG 56 402 402 ARG ARG A . n A 1 57 CYS 57 403 403 CYS CYS A . n A 1 58 ALA 58 404 404 ALA ALA A . n A 1 59 ASN 59 405 405 ASN ASN A . n A 1 60 TYR 60 406 406 TYR TYR A . n A 1 61 ILE 61 407 407 ILE ILE A . n A 1 62 SER 62 408 408 SER SER A . n A 1 63 LEU 63 409 409 LEU LEU A . n A 1 64 PHE 64 410 410 PHE PHE A . n A 1 65 VAL 65 411 411 VAL VAL A . n A 1 66 HIS 66 412 412 HIS HIS A . n A 1 67 THR 67 413 413 THR THR A . n A 1 68 MET 68 414 414 MET MET A . n A 1 69 GLN 69 415 415 GLN GLN A . n A 1 70 GLY 70 416 416 GLY GLY A . n A 1 71 GLU 71 417 417 GLU GLU A . n A 1 72 TYR 72 418 418 TYR TYR A . n A 1 73 ASP 73 419 419 ASP ASP A . n A 1 74 SER 74 420 420 SER SER A . n A 1 75 HIS 75 421 421 HIS HIS A . n A 1 76 LEU 76 422 422 LEU LEU A . n A 1 77 PRO 77 423 423 PRO PRO A . n A 1 78 TRP 78 424 424 TRP TRP A . n A 1 79 PRO 79 425 425 PRO PRO A . n A 1 80 PHE 80 426 426 PHE PHE A . n A 1 81 GLN 81 427 427 GLN GLN A . n A 1 82 GLY 82 428 428 GLY GLY A . n A 1 83 THR 83 429 429 THR THR A . n A 1 84 ILE 84 430 430 ILE ILE A . n A 1 85 ARG 85 431 431 ARG ARG A . n A 1 86 LEU 86 432 432 LEU LEU A . n A 1 87 THR 87 433 433 THR THR A . n A 1 88 ILE 88 434 434 ILE ILE A . n A 1 89 LEU 89 435 435 LEU LEU A . n A 1 90 ASP 90 436 436 ASP ASP A . n A 1 91 GLN 91 437 437 GLN GLN A . n A 1 92 SER 92 438 438 SER SER A . n A 1 93 GLU 93 439 439 GLU GLU A . n A 1 94 ALA 94 440 440 ALA ALA A . n A 1 95 PRO 95 441 441 PRO PRO A . n A 1 96 VAL 96 442 442 VAL VAL A . n A 1 97 ARG 97 443 443 ARG ARG A . n A 1 98 GLN 98 444 444 GLN GLN A . n A 1 99 ASN 99 445 445 ASN ASN A . n A 1 100 HIS 100 446 446 HIS HIS A . n A 1 101 GLU 101 447 447 GLU GLU A . n A 1 102 GLU 102 448 448 GLU GLU A . n A 1 103 ILE 103 449 449 ILE ILE A . n A 1 104 MET 104 450 450 MET MET A . n A 1 105 ASP 105 451 451 ASP ASP A . n A 1 106 ALA 106 452 452 ALA ALA A . n A 1 107 LYS 107 453 453 LYS LYS A . n A 1 108 PRO 108 454 454 PRO PRO A . n A 1 109 GLU 109 455 455 GLU GLU A . n A 1 110 LEU 110 456 456 LEU LEU A . n A 1 111 LEU 111 457 457 LEU LEU A . n A 1 112 ALA 112 458 458 ALA ALA A . n A 1 113 PHE 113 459 459 PHE PHE A . n A 1 114 GLN 114 460 460 GLN GLN A . n A 1 115 ARG 115 461 461 ARG ARG A . n A 1 116 PRO 116 462 462 PRO PRO A . n A 1 117 THR 117 463 463 THR THR A . n A 1 118 ILE 118 464 464 ILE ILE A . n A 1 119 PRO 119 465 465 PRO PRO A . n A 1 120 ARG 120 466 466 ARG ARG A . n A 1 121 ASN 121 467 467 ASN ASN A . n A 1 122 PRO 122 468 468 PRO PRO A . n A 1 123 LYS 123 469 469 LYS LYS A . n A 1 124 GLY 124 470 470 GLY GLY A . n A 1 125 PHE 125 471 471 PHE PHE A . n A 1 126 GLY 126 472 472 GLY GLY A . n A 1 127 TYR 127 473 473 TYR TYR A . n A 1 128 VAL 128 474 474 VAL VAL A . n A 1 129 THR 129 475 475 THR THR A . n A 1 130 PHE 130 476 476 PHE PHE A . n A 1 131 MET 131 477 477 MET MET A . n A 1 132 HIS 132 478 478 HIS HIS A . n A 1 133 LEU 133 479 479 LEU LEU A . n A 1 134 GLU 134 480 480 GLU GLU A . n A 1 135 ALA 135 481 481 ALA ALA A . n A 1 136 LEU 136 482 482 LEU LEU A . n A 1 137 ARG 137 483 483 ARG ARG A . n A 1 138 GLN 138 484 484 GLN GLN A . n A 1 139 ARG 139 485 485 ARG ARG A . n A 1 140 THR 140 486 486 THR THR A . n A 1 141 PHE 141 487 487 PHE PHE A . n A 1 142 ILE 142 488 488 ILE ILE A . n A 1 143 LYS 143 489 489 LYS LYS A . n A 1 144 ASP 144 490 490 ASP ASP A . n A 1 145 ASP 145 491 491 ASP ASP A . n A 1 146 THR 146 492 492 THR THR A . n A 1 147 LEU 147 493 493 LEU LEU A . n A 1 148 LEU 148 494 494 LEU LEU A . n A 1 149 VAL 149 495 495 VAL VAL A . n A 1 150 ARG 150 496 496 ARG ARG A . n A 1 151 CYS 151 497 497 CYS CYS A . n A 1 152 GLU 152 498 498 GLU GLU A . n A 1 153 VAL 153 499 499 VAL VAL A . n A 1 154 SER 154 500 500 SER SER A . n A 1 155 THR 155 501 501 THR THR A . n A 1 156 ARG 156 502 ? ? ? A . n A 1 157 PHE 157 503 ? ? ? A . n A 1 158 ASP 158 504 ? ? ? A . n A 1 159 LEU 159 505 ? ? ? A . n A 1 160 GLU 160 506 ? ? ? A . n B 2 1 LYS 1 601 601 LYS LYS B . n B 2 2 GLN 2 602 602 GLN GLN B . n B 2 3 GLU 3 603 603 GLU GLU B . n B 2 4 PRO 4 604 604 PRO PRO B . n B 2 5 GLN 5 605 605 GLN GLN B . n B 2 6 GLU 6 606 606 GLU GLU B . n B 2 7 ILE 7 607 607 ILE ILE B . n B 2 8 ASP 8 608 608 ASP ASP B . n B 2 9 PHE 9 609 609 PHE PHE B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 700 700 HOH TIP A . C 3 HOH 2 701 701 HOH TIP A . C 3 HOH 3 703 703 HOH TIP A . C 3 HOH 4 705 705 HOH TIP A . C 3 HOH 5 706 706 HOH TIP A . C 3 HOH 6 707 707 HOH TIP A . C 3 HOH 7 708 708 HOH TIP A . C 3 HOH 8 709 709 HOH TIP A . C 3 HOH 9 710 710 HOH TIP A . C 3 HOH 10 711 711 HOH TIP A . C 3 HOH 11 712 712 HOH TIP A . C 3 HOH 12 713 713 HOH TIP A . C 3 HOH 13 714 714 HOH TIP A . C 3 HOH 14 715 715 HOH TIP A . C 3 HOH 15 716 716 HOH TIP A . C 3 HOH 16 717 717 HOH TIP A . C 3 HOH 17 718 718 HOH TIP A . C 3 HOH 18 719 719 HOH TIP A . C 3 HOH 19 720 720 HOH TIP A . C 3 HOH 20 721 721 HOH TIP A . C 3 HOH 21 722 722 HOH TIP A . C 3 HOH 22 723 723 HOH TIP A . C 3 HOH 23 724 724 HOH TIP A . C 3 HOH 24 725 725 HOH TIP A . C 3 HOH 25 726 726 HOH TIP A . C 3 HOH 26 727 727 HOH TIP A . C 3 HOH 27 728 728 HOH TIP A . C 3 HOH 28 729 729 HOH TIP A . C 3 HOH 29 730 730 HOH TIP A . C 3 HOH 30 731 731 HOH TIP A . C 3 HOH 31 732 732 HOH TIP A . C 3 HOH 32 733 733 HOH TIP A . C 3 HOH 33 736 736 HOH TIP A . C 3 HOH 34 737 737 HOH TIP A . C 3 HOH 35 738 738 HOH TIP A . C 3 HOH 36 739 739 HOH TIP A . C 3 HOH 37 740 740 HOH TIP A . C 3 HOH 38 741 741 HOH TIP A . C 3 HOH 39 742 742 HOH TIP A . C 3 HOH 40 743 743 HOH TIP A . C 3 HOH 41 744 744 HOH TIP A . C 3 HOH 42 745 745 HOH TIP A . C 3 HOH 43 746 746 HOH TIP A . C 3 HOH 44 747 747 HOH TIP A . C 3 HOH 45 748 748 HOH TIP A . C 3 HOH 46 749 749 HOH TIP A . C 3 HOH 47 750 750 HOH TIP A . C 3 HOH 48 752 752 HOH TIP A . C 3 HOH 49 753 753 HOH TIP A . C 3 HOH 50 754 754 HOH TIP A . C 3 HOH 51 755 755 HOH TIP A . C 3 HOH 52 756 756 HOH TIP A . C 3 HOH 53 757 757 HOH TIP A . C 3 HOH 54 758 758 HOH TIP A . C 3 HOH 55 759 759 HOH TIP A . C 3 HOH 56 760 760 HOH TIP A . C 3 HOH 57 761 761 HOH TIP A . C 3 HOH 58 762 762 HOH TIP A . C 3 HOH 59 763 763 HOH TIP A . C 3 HOH 60 764 764 HOH TIP A . C 3 HOH 61 765 765 HOH TIP A . C 3 HOH 62 766 766 HOH TIP A . C 3 HOH 63 767 767 HOH TIP A . C 3 HOH 64 768 768 HOH TIP A . C 3 HOH 65 769 769 HOH TIP A . C 3 HOH 66 770 770 HOH TIP A . C 3 HOH 67 771 771 HOH TIP A . C 3 HOH 68 772 772 HOH TIP A . C 3 HOH 69 773 773 HOH TIP A . C 3 HOH 70 774 774 HOH TIP A . C 3 HOH 71 775 775 HOH TIP A . C 3 HOH 72 776 776 HOH TIP A . C 3 HOH 73 777 777 HOH TIP A . C 3 HOH 74 778 778 HOH TIP A . C 3 HOH 75 779 779 HOH TIP A . C 3 HOH 76 780 780 HOH TIP A . C 3 HOH 77 781 781 HOH TIP A . C 3 HOH 78 782 782 HOH TIP A . C 3 HOH 79 783 783 HOH TIP A . C 3 HOH 80 784 784 HOH TIP A . C 3 HOH 81 785 785 HOH TIP A . C 3 HOH 82 786 786 HOH TIP A . C 3 HOH 83 787 787 HOH TIP A . C 3 HOH 84 788 788 HOH TIP A . C 3 HOH 85 789 789 HOH TIP A . C 3 HOH 86 790 790 HOH TIP A . C 3 HOH 87 791 791 HOH TIP A . C 3 HOH 88 792 792 HOH TIP A . C 3 HOH 89 793 793 HOH TIP A . C 3 HOH 90 794 794 HOH TIP A . C 3 HOH 91 795 795 HOH TIP A . C 3 HOH 92 796 796 HOH TIP A . C 3 HOH 93 797 797 HOH TIP A . C 3 HOH 94 798 798 HOH TIP A . C 3 HOH 95 800 800 HOH TIP A . C 3 HOH 96 801 801 HOH TIP A . C 3 HOH 97 802 802 HOH TIP A . C 3 HOH 98 803 803 HOH TIP A . C 3 HOH 99 805 805 HOH TIP A . C 3 HOH 100 806 806 HOH TIP A . C 3 HOH 101 807 807 HOH TIP A . C 3 HOH 102 808 808 HOH TIP A . C 3 HOH 103 809 809 HOH TIP A . C 3 HOH 104 810 810 HOH TIP A . C 3 HOH 105 811 811 HOH TIP A . C 3 HOH 106 812 812 HOH TIP A . C 3 HOH 107 813 813 HOH TIP A . C 3 HOH 108 815 815 HOH TIP A . C 3 HOH 109 816 816 HOH TIP A . C 3 HOH 110 818 818 HOH TIP A . C 3 HOH 111 820 820 HOH TIP A . C 3 HOH 112 821 821 HOH TIP A . D 3 HOH 1 702 702 HOH TIP B . D 3 HOH 2 704 704 HOH TIP B . D 3 HOH 3 734 734 HOH TIP B . D 3 HOH 4 735 735 HOH TIP B . D 3 HOH 5 751 751 HOH TIP B . D 3 HOH 6 799 799 HOH TIP B . D 3 HOH 7 804 804 HOH TIP B . D 3 HOH 8 814 814 HOH TIP B . D 3 HOH 9 817 817 HOH TIP B . D 3 HOH 10 819 819 HOH TIP B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 347 ? CG ? A GLN 1 CG 2 1 Y 1 A GLN 347 ? CD ? A GLN 1 CD 3 1 Y 1 A GLN 347 ? OE1 ? A GLN 1 OE1 4 1 Y 1 A GLN 347 ? NE2 ? A GLN 1 NE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 0.9 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 # _cell.entry_id 1LB6 _cell.length_a 39.879 _cell.length_b 43.815 _cell.length_c 101.435 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LB6 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 1LB6 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 44.97 _exptl_crystal.density_Matthews 2.24 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'PEG8000, Tris, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 1999-09-21 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1LB6 _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 33.2 _reflns.d_resolution_high 1.80 _reflns.number_obs 15569 _reflns.number_all ? _reflns.percent_possible_obs 90.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 9.7 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.91 _reflns_shell.percent_possible_all 66.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1887 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1LB6 _refine.ls_number_reflns_obs 15569 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 33.16 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 6.0 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2030000 _refine.ls_R_factor_R_free 0.2580000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 928 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 20.3 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'TRAF6 apo form' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model isotropic _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1LB6 _refine_analyze.Luzzati_coordinate_error_obs 0.22 _refine_analyze.Luzzati_sigma_a_obs 0.17 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.25 _refine_analyze.Luzzati_sigma_a_free 0.13 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1340 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 122 _refine_hist.number_atoms_total 1462 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 33.16 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.5 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 26.1 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.81 ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1LB6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1LB6 _struct.title 'TRAF6-CD40 Complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1LB6 _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'TRAF6-CD40 complex, SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP TRAF6_HUMAN 1 ;QQCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPF QGTIRLTILDQSEAPVRQNHEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFD ; 347 Q9Y4K3 ? 2 UNP TNR5_HUMAN 2 KQEPQEINF 230 P25942 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1LB6 A 1 ? 158 ? Q9Y4K3 347 ? 504 ? 347 504 2 2 1LB6 B 1 ? 9 ? P25942 230 ? 238 ? 601 609 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1LB6 LEU A 159 ? UNP Q9Y4K3 ? ? 'cloning artifact' 505 1 1 1LB6 GLU A 160 ? UNP Q9Y4K3 ? ? 'cloning artifact' 506 2 2 1LB6 ASP B 8 ? UNP P25942 ASN 237 conflict 608 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1150 ? 1 MORE -3 ? 1 'SSA (A^2)' 9040 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 13 ? GLU A 23 ? ASN A 359 GLU A 369 1 ? 11 HELX_P HELX_P2 2 TYR A 72 ? LEU A 76 ? TYR A 418 LEU A 422 5 ? 5 HELX_P HELX_P3 3 LEU A 110 ? GLN A 114 ? LEU A 456 GLN A 460 5 ? 5 HELX_P HELX_P4 4 GLU A 134 ? GLN A 138 ? GLU A 480 GLN A 484 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LYS 38 A . ? LYS 384 A PRO 39 A ? PRO 385 A 1 -0.16 2 TRP 78 A . ? TRP 424 A PRO 79 A ? PRO 425 A 1 -0.18 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 5 ? ILE A 11 ? GLY A 351 ILE A 357 A 2 LEU A 147 ? SER A 154 ? LEU A 493 SER A 500 A 3 THR A 83 ? ILE A 88 ? THR A 429 ILE A 434 A 4 HIS A 100 ? ASP A 105 ? HIS A 446 ASP A 451 B 1 GLN B 5 ? ASP B 8 ? GLN B 605 ASP B 608 B 2 LYS A 123 ? HIS A 132 ? LYS A 469 HIS A 478 B 3 TYR A 60 ? MET A 68 ? TYR A 406 MET A 414 B 4 LYS A 42 ? LEU A 49 ? LYS A 388 LEU A 395 B 5 VAL A 27 ? HIS A 30 ? VAL A 373 HIS A 376 C 1 GLN B 5 ? ASP B 8 ? GLN B 605 ASP B 608 C 2 LYS A 123 ? HIS A 132 ? LYS A 469 HIS A 478 C 3 TYR A 60 ? MET A 68 ? TYR A 406 MET A 414 C 4 LYS A 42 ? LEU A 49 ? LYS A 388 LEU A 395 C 5 PHE A 34 ? TYR A 35 ? PHE A 380 TYR A 381 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TRP A 9 ? N TRP A 355 O VAL A 149 ? O VAL A 495 A 2 3 O ARG A 150 ? O ARG A 496 N THR A 87 ? N THR A 433 A 3 4 N ILE A 88 ? N ILE A 434 O HIS A 100 ? O HIS A 446 B 1 2 O ILE B 7 ? O ILE B 607 N GLY A 124 ? N GLY A 470 B 2 3 O MET A 131 ? O MET A 477 N ILE A 61 ? N ILE A 407 B 3 4 O SER A 62 ? O SER A 408 N HIS A 48 ? N HIS A 394 B 4 5 O LEU A 47 ? O LEU A 393 N ILE A 29 ? N ILE A 375 C 1 2 O ILE B 7 ? O ILE B 607 N GLY A 124 ? N GLY A 470 C 2 3 O MET A 131 ? O MET A 477 N ILE A 61 ? N ILE A 407 C 3 4 O SER A 62 ? O SER A 408 N HIS A 48 ? N HIS A 394 C 4 5 O LEU A 43 ? O LEU A 389 N PHE A 34 ? N PHE A 380 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 438 ? ? -79.20 -160.83 2 1 THR A 475 ? ? -108.87 60.36 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 502 ? A ARG 156 2 1 Y 1 A PHE 503 ? A PHE 157 3 1 Y 1 A ASP 504 ? A ASP 158 4 1 Y 1 A LEU 505 ? A LEU 159 5 1 Y 1 A GLU 506 ? A GLU 160 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'TRAF6 apo form' # _atom_sites.entry_id 1LB6 _atom_sites.fract_transf_matrix[1][1] 0.025076 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022823 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009859 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_