data_1LKP # _entry.id 1LKP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1LKP pdb_00001lkp 10.2210/pdb1lkp/pdb RCSB RCSB016034 ? ? WWPDB D_1000016034 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-09-18 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 5 'Structure model' 1 4 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site 7 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.value' 18 4 'Structure model' '_struct_conn.pdbx_dist_value' 19 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 26 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 31 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 32 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 33 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1LKP _pdbx_database_status.recvd_initial_deposition_date 2002-04-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1LKM 'SAME PROTEIN CRYSTALIZED UNDER DIFFERENT CONDITIONS' unspecified PDB 1LKO 'SAME PROTEIN CRYSTALIZED UNDER DIFFERENT CONDITIONS' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jin, S.' 1 'Kurtz Jr., D.M.' 2 'Liu, Z.J.' 3 'Rose, J.' 4 'Wang, B.C.' 5 # _citation.id primary _citation.title 'X-ray Crystal Structures of Reduced Rubrerythrin and its Azide Adduct: A Structure-Based Mechanism for a Non-Heme Diiron Peroxidase' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 124 _citation.page_first 9845 _citation.page_last 9855 _citation.year 2002 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12175244 _citation.pdbx_database_id_DOI 10.1021/ja026587u # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jin, S.' 1 ? primary 'Kurtz Jr., D.M.' 2 ? primary 'Liu, Z.J.' 3 ? primary 'Rose, J.' 4 ? primary 'Wang, B.C.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Rubrerythrin 21577.281 1 ? ? ? 'all-iron (II) form' 2 non-polymer syn 'AZIDE ION' 42.020 2 ? ? ? ? 3 non-polymer syn 'FE (II) ION' 55.845 3 ? ? ? ? 4 water nat water 18.015 262 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKSLKGSRTEKNILTAFAGESQARNRYNYFGGQAKKDGFVQISDIFAETADQEREHAKRLFKFLEGGDLEIVAAFPAGII ADTHANLIASAAGEHHEYTEMYPSFARIAREEGYEEIARVFASIAVAEEFHEKRFLDFARNIKEGRVFLREQATKWRCRN CGYVHEGTGAPELCPACAHPKAHFELLGINW ; _entity_poly.pdbx_seq_one_letter_code_can ;MKSLKGSRTEKNILTAFAGESQARNRYNYFGGQAKKDGFVQISDIFAETADQEREHAKRLFKFLEGGDLEIVAAFPAGII ADTHANLIASAAGEHHEYTEMYPSFARIAREEGYEEIARVFASIAVAEEFHEKRFLDFARNIKEGRVFLREQATKWRCRN CGYVHEGTGAPELCPACAHPKAHFELLGINW ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'AZIDE ION' AZI 3 'FE (II) ION' FE2 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 SER n 1 4 LEU n 1 5 LYS n 1 6 GLY n 1 7 SER n 1 8 ARG n 1 9 THR n 1 10 GLU n 1 11 LYS n 1 12 ASN n 1 13 ILE n 1 14 LEU n 1 15 THR n 1 16 ALA n 1 17 PHE n 1 18 ALA n 1 19 GLY n 1 20 GLU n 1 21 SER n 1 22 GLN n 1 23 ALA n 1 24 ARG n 1 25 ASN n 1 26 ARG n 1 27 TYR n 1 28 ASN n 1 29 TYR n 1 30 PHE n 1 31 GLY n 1 32 GLY n 1 33 GLN n 1 34 ALA n 1 35 LYS n 1 36 LYS n 1 37 ASP n 1 38 GLY n 1 39 PHE n 1 40 VAL n 1 41 GLN n 1 42 ILE n 1 43 SER n 1 44 ASP n 1 45 ILE n 1 46 PHE n 1 47 ALA n 1 48 GLU n 1 49 THR n 1 50 ALA n 1 51 ASP n 1 52 GLN n 1 53 GLU n 1 54 ARG n 1 55 GLU n 1 56 HIS n 1 57 ALA n 1 58 LYS n 1 59 ARG n 1 60 LEU n 1 61 PHE n 1 62 LYS n 1 63 PHE n 1 64 LEU n 1 65 GLU n 1 66 GLY n 1 67 GLY n 1 68 ASP n 1 69 LEU n 1 70 GLU n 1 71 ILE n 1 72 VAL n 1 73 ALA n 1 74 ALA n 1 75 PHE n 1 76 PRO n 1 77 ALA n 1 78 GLY n 1 79 ILE n 1 80 ILE n 1 81 ALA n 1 82 ASP n 1 83 THR n 1 84 HIS n 1 85 ALA n 1 86 ASN n 1 87 LEU n 1 88 ILE n 1 89 ALA n 1 90 SER n 1 91 ALA n 1 92 ALA n 1 93 GLY n 1 94 GLU n 1 95 HIS n 1 96 HIS n 1 97 GLU n 1 98 TYR n 1 99 THR n 1 100 GLU n 1 101 MET n 1 102 TYR n 1 103 PRO n 1 104 SER n 1 105 PHE n 1 106 ALA n 1 107 ARG n 1 108 ILE n 1 109 ALA n 1 110 ARG n 1 111 GLU n 1 112 GLU n 1 113 GLY n 1 114 TYR n 1 115 GLU n 1 116 GLU n 1 117 ILE n 1 118 ALA n 1 119 ARG n 1 120 VAL n 1 121 PHE n 1 122 ALA n 1 123 SER n 1 124 ILE n 1 125 ALA n 1 126 VAL n 1 127 ALA n 1 128 GLU n 1 129 GLU n 1 130 PHE n 1 131 HIS n 1 132 GLU n 1 133 LYS n 1 134 ARG n 1 135 PHE n 1 136 LEU n 1 137 ASP n 1 138 PHE n 1 139 ALA n 1 140 ARG n 1 141 ASN n 1 142 ILE n 1 143 LYS n 1 144 GLU n 1 145 GLY n 1 146 ARG n 1 147 VAL n 1 148 PHE n 1 149 LEU n 1 150 ARG n 1 151 GLU n 1 152 GLN n 1 153 ALA n 1 154 THR n 1 155 LYS n 1 156 TRP n 1 157 ARG n 1 158 CYS n 1 159 ARG n 1 160 ASN n 1 161 CYS n 1 162 GLY n 1 163 TYR n 1 164 VAL n 1 165 HIS n 1 166 GLU n 1 167 GLY n 1 168 THR n 1 169 GLY n 1 170 ALA n 1 171 PRO n 1 172 GLU n 1 173 LEU n 1 174 CYS n 1 175 PRO n 1 176 ALA n 1 177 CYS n 1 178 ALA n 1 179 HIS n 1 180 PRO n 1 181 LYS n 1 182 ALA n 1 183 HIS n 1 184 PHE n 1 185 GLU n 1 186 LEU n 1 187 LEU n 1 188 GLY n 1 189 ILE n 1 190 ASN n 1 191 TRP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Desulfovibrio _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Desulfovibrio vulgaris' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 881 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain "'BL21(DE3)" _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 AZI non-polymer . 'AZIDE ION' ? 'N3 -1' 42.020 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FE2 non-polymer . 'FE (II) ION' ? 'Fe 2' 55.845 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 PHE 17 17 17 PHE PHE A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 GLN 22 22 22 GLN GLN A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 TYR 27 27 27 TYR TYR A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 TYR 29 29 29 TYR TYR A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 GLN 33 33 33 GLN GLN A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 PHE 39 39 39 PHE PHE A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 GLN 52 52 52 GLN GLN A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 HIS 56 56 56 HIS HIS A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 ARG 59 59 59 ARG ARG A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 PHE 61 61 61 PHE PHE A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 PHE 75 75 75 PHE PHE A . n A 1 76 PRO 76 76 76 PRO PRO A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 ASP 82 82 82 ASP ASP A . n A 1 83 THR 83 83 83 THR THR A . n A 1 84 HIS 84 84 84 HIS HIS A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 HIS 95 95 95 HIS HIS A . n A 1 96 HIS 96 96 96 HIS HIS A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 TYR 98 98 98 TYR TYR A . n A 1 99 THR 99 99 99 THR THR A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 MET 101 101 101 MET MET A . n A 1 102 TYR 102 102 102 TYR TYR A . n A 1 103 PRO 103 103 103 PRO PRO A . n A 1 104 SER 104 104 104 SER SER A . n A 1 105 PHE 105 105 105 PHE PHE A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 ARG 107 107 107 ARG ARG A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 ARG 110 110 110 ARG ARG A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 GLU 112 112 112 GLU GLU A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 TYR 114 114 114 TYR TYR A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 GLU 116 116 116 GLU GLU A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 ARG 119 119 119 ARG ARG A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 PHE 121 121 121 PHE PHE A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 SER 123 123 123 SER SER A . n A 1 124 ILE 124 124 124 ILE ILE A . n A 1 125 ALA 125 125 125 ALA ALA A . n A 1 126 VAL 126 126 126 VAL VAL A . n A 1 127 ALA 127 127 127 ALA ALA A . n A 1 128 GLU 128 128 128 GLU GLU A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 PHE 130 130 130 PHE PHE A . n A 1 131 HIS 131 131 131 HIS HIS A . n A 1 132 GLU 132 132 132 GLU GLU A . n A 1 133 LYS 133 133 133 LYS LYS A . n A 1 134 ARG 134 134 134 ARG ARG A . n A 1 135 PHE 135 135 135 PHE PHE A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 ASP 137 137 137 ASP ASP A . n A 1 138 PHE 138 138 138 PHE PHE A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 ARG 140 140 140 ARG ARG A . n A 1 141 ASN 141 141 141 ASN ASN A . n A 1 142 ILE 142 142 142 ILE ILE A . n A 1 143 LYS 143 143 143 LYS LYS A . n A 1 144 GLU 144 144 144 GLU GLU A . n A 1 145 GLY 145 145 145 GLY GLY A . n A 1 146 ARG 146 146 146 ARG ARG A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 PHE 148 148 148 PHE PHE A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 ARG 150 150 150 ARG ARG A . n A 1 151 GLU 151 151 151 GLU GLU A . n A 1 152 GLN 152 152 152 GLN GLN A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 THR 154 154 154 THR THR A . n A 1 155 LYS 155 155 155 LYS LYS A . n A 1 156 TRP 156 156 156 TRP TRP A . n A 1 157 ARG 157 157 157 ARG ARG A . n A 1 158 CYS 158 158 158 CYS CYS A . n A 1 159 ARG 159 159 159 ARG ARG A . n A 1 160 ASN 160 160 160 ASN ASN A . n A 1 161 CYS 161 161 161 CYS CYS A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 TYR 163 163 163 TYR TYR A . n A 1 164 VAL 164 164 164 VAL VAL A . n A 1 165 HIS 165 165 165 HIS HIS A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 GLY 167 167 167 GLY GLY A . n A 1 168 THR 168 168 168 THR THR A . n A 1 169 GLY 169 169 169 GLY GLY A . n A 1 170 ALA 170 170 170 ALA ALA A . n A 1 171 PRO 171 171 171 PRO PRO A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 CYS 174 174 174 CYS CYS A . n A 1 175 PRO 175 175 175 PRO PRO A . n A 1 176 ALA 176 176 176 ALA ALA A . n A 1 177 CYS 177 177 177 CYS CYS A . n A 1 178 ALA 178 178 178 ALA ALA A . n A 1 179 HIS 179 179 179 HIS HIS A . n A 1 180 PRO 180 180 180 PRO PRO A . n A 1 181 LYS 181 181 181 LYS LYS A . n A 1 182 ALA 182 182 182 ALA ALA A . n A 1 183 HIS 183 183 183 HIS HIS A . n A 1 184 PHE 184 184 184 PHE PHE A . n A 1 185 GLU 185 185 185 GLU GLU A . n A 1 186 LEU 186 186 186 LEU LEU A . n A 1 187 LEU 187 187 187 LEU LEU A . n A 1 188 GLY 188 188 188 GLY GLY A . n A 1 189 ILE 189 189 189 ILE ILE A . n A 1 190 ASN 190 190 190 ASN ASN A . n A 1 191 TRP 191 191 191 TRP TRP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AZI 1 2000 2000 AZI NNN A . C 2 AZI 1 2001 2001 AZI NNN A . D 3 FE2 1 600 600 FE2 FE2 A . E 3 FE2 1 601 601 FE2 FE2 A . F 3 FE2 1 401 401 FE2 FE2 A . G 4 HOH 1 2002 1 HOH TIP A . G 4 HOH 2 2003 2 HOH TIP A . G 4 HOH 3 2004 3 HOH TIP A . G 4 HOH 4 2005 4 HOH TIP A . G 4 HOH 5 2006 5 HOH TIP A . G 4 HOH 6 2007 6 HOH TIP A . G 4 HOH 7 2008 7 HOH TIP A . G 4 HOH 8 2009 8 HOH TIP A . G 4 HOH 9 2010 9 HOH TIP A . G 4 HOH 10 2011 10 HOH TIP A . G 4 HOH 11 2012 11 HOH TIP A . G 4 HOH 12 2013 12 HOH TIP A . G 4 HOH 13 2014 13 HOH TIP A . G 4 HOH 14 2015 14 HOH TIP A . G 4 HOH 15 2016 15 HOH TIP A . G 4 HOH 16 2017 16 HOH TIP A . G 4 HOH 17 2018 17 HOH TIP A . G 4 HOH 18 2019 18 HOH TIP A . G 4 HOH 19 2020 19 HOH TIP A . G 4 HOH 20 2021 20 HOH TIP A . G 4 HOH 21 2022 21 HOH TIP A . G 4 HOH 22 2023 22 HOH TIP A . G 4 HOH 23 2024 23 HOH TIP A . G 4 HOH 24 2025 24 HOH TIP A . G 4 HOH 25 2026 25 HOH TIP A . G 4 HOH 26 2027 26 HOH TIP A . G 4 HOH 27 2028 27 HOH TIP A . G 4 HOH 28 2029 28 HOH TIP A . G 4 HOH 29 2030 29 HOH TIP A . G 4 HOH 30 2031 30 HOH TIP A . G 4 HOH 31 2032 31 HOH TIP A . G 4 HOH 32 2033 32 HOH TIP A . G 4 HOH 33 2034 33 HOH TIP A . G 4 HOH 34 2035 34 HOH TIP A . G 4 HOH 35 2036 35 HOH TIP A . G 4 HOH 36 2037 36 HOH TIP A . G 4 HOH 37 2038 37 HOH TIP A . G 4 HOH 38 2039 38 HOH TIP A . G 4 HOH 39 2040 39 HOH TIP A . G 4 HOH 40 2041 40 HOH TIP A . G 4 HOH 41 2042 41 HOH TIP A . G 4 HOH 42 2043 42 HOH TIP A . G 4 HOH 43 2044 43 HOH TIP A . G 4 HOH 44 2045 44 HOH TIP A . G 4 HOH 45 2046 45 HOH TIP A . G 4 HOH 46 2047 46 HOH TIP A . G 4 HOH 47 2048 47 HOH TIP A . G 4 HOH 48 2049 48 HOH TIP A . G 4 HOH 49 2050 49 HOH TIP A . G 4 HOH 50 2051 50 HOH TIP A . G 4 HOH 51 2052 51 HOH TIP A . G 4 HOH 52 2053 52 HOH TIP A . G 4 HOH 53 2054 53 HOH TIP A . G 4 HOH 54 2055 54 HOH TIP A . G 4 HOH 55 2056 55 HOH TIP A . G 4 HOH 56 2057 57 HOH TIP A . G 4 HOH 57 2058 58 HOH TIP A . G 4 HOH 58 2059 59 HOH TIP A . G 4 HOH 59 2060 60 HOH TIP A . G 4 HOH 60 2061 61 HOH TIP A . G 4 HOH 61 2062 62 HOH TIP A . G 4 HOH 62 2063 63 HOH TIP A . G 4 HOH 63 2064 64 HOH TIP A . G 4 HOH 64 2065 65 HOH TIP A . G 4 HOH 65 2066 66 HOH TIP A . G 4 HOH 66 2067 67 HOH TIP A . G 4 HOH 67 2068 68 HOH TIP A . G 4 HOH 68 2069 69 HOH TIP A . G 4 HOH 69 2070 70 HOH TIP A . G 4 HOH 70 2071 71 HOH TIP A . G 4 HOH 71 2072 72 HOH TIP A . G 4 HOH 72 2073 73 HOH TIP A . G 4 HOH 73 2074 74 HOH TIP A . G 4 HOH 74 2075 75 HOH TIP A . G 4 HOH 75 2076 76 HOH TIP A . G 4 HOH 76 2077 77 HOH TIP A . G 4 HOH 77 2078 78 HOH TIP A . G 4 HOH 78 2079 79 HOH TIP A . G 4 HOH 79 2080 80 HOH TIP A . G 4 HOH 80 2081 81 HOH TIP A . G 4 HOH 81 2082 82 HOH TIP A . G 4 HOH 82 2083 83 HOH TIP A . G 4 HOH 83 2084 84 HOH TIP A . G 4 HOH 84 2085 85 HOH TIP A . G 4 HOH 85 2086 86 HOH TIP A . G 4 HOH 86 2087 87 HOH TIP A . G 4 HOH 87 2088 88 HOH TIP A . G 4 HOH 88 2089 90 HOH TIP A . G 4 HOH 89 2090 91 HOH TIP A . G 4 HOH 90 2091 92 HOH TIP A . G 4 HOH 91 2092 93 HOH TIP A . G 4 HOH 92 2093 94 HOH TIP A . G 4 HOH 93 2094 95 HOH TIP A . G 4 HOH 94 2095 96 HOH TIP A . G 4 HOH 95 2096 97 HOH TIP A . G 4 HOH 96 2097 98 HOH TIP A . G 4 HOH 97 2098 99 HOH TIP A . G 4 HOH 98 2099 100 HOH TIP A . G 4 HOH 99 2100 101 HOH TIP A . G 4 HOH 100 2101 102 HOH TIP A . G 4 HOH 101 2102 103 HOH TIP A . G 4 HOH 102 2103 104 HOH TIP A . G 4 HOH 103 2104 105 HOH TIP A . G 4 HOH 104 2105 106 HOH TIP A . G 4 HOH 105 2106 107 HOH TIP A . G 4 HOH 106 2107 108 HOH TIP A . G 4 HOH 107 2108 109 HOH TIP A . G 4 HOH 108 2109 110 HOH TIP A . G 4 HOH 109 2110 111 HOH TIP A . G 4 HOH 110 2111 112 HOH TIP A . G 4 HOH 111 2112 113 HOH TIP A . G 4 HOH 112 2113 114 HOH TIP A . G 4 HOH 113 2114 115 HOH TIP A . G 4 HOH 114 2115 116 HOH TIP A . G 4 HOH 115 2116 117 HOH TIP A . G 4 HOH 116 2117 118 HOH TIP A . G 4 HOH 117 2118 119 HOH TIP A . G 4 HOH 118 2119 120 HOH TIP A . G 4 HOH 119 2120 121 HOH TIP A . G 4 HOH 120 2121 122 HOH TIP A . G 4 HOH 121 2122 123 HOH TIP A . G 4 HOH 122 2123 124 HOH TIP A . G 4 HOH 123 2124 125 HOH TIP A . G 4 HOH 124 2125 126 HOH TIP A . G 4 HOH 125 2126 127 HOH TIP A . G 4 HOH 126 2127 128 HOH TIP A . G 4 HOH 127 2128 129 HOH TIP A . G 4 HOH 128 2129 130 HOH TIP A . G 4 HOH 129 2130 131 HOH TIP A . G 4 HOH 130 2131 132 HOH TIP A . G 4 HOH 131 2132 133 HOH TIP A . G 4 HOH 132 2133 134 HOH TIP A . G 4 HOH 133 2134 135 HOH TIP A . G 4 HOH 134 2135 136 HOH TIP A . G 4 HOH 135 2136 137 HOH TIP A . G 4 HOH 136 2137 138 HOH TIP A . G 4 HOH 137 2138 139 HOH TIP A . G 4 HOH 138 2139 140 HOH TIP A . G 4 HOH 139 2140 141 HOH TIP A . G 4 HOH 140 2141 142 HOH TIP A . G 4 HOH 141 2142 143 HOH TIP A . G 4 HOH 142 2143 144 HOH TIP A . G 4 HOH 143 2144 145 HOH TIP A . G 4 HOH 144 2145 146 HOH TIP A . G 4 HOH 145 2146 147 HOH TIP A . G 4 HOH 146 2147 148 HOH TIP A . G 4 HOH 147 2148 149 HOH TIP A . G 4 HOH 148 2149 150 HOH TIP A . G 4 HOH 149 2150 151 HOH TIP A . G 4 HOH 150 2151 152 HOH TIP A . G 4 HOH 151 2152 153 HOH TIP A . G 4 HOH 152 2153 154 HOH TIP A . G 4 HOH 153 2154 155 HOH TIP A . G 4 HOH 154 2155 156 HOH TIP A . G 4 HOH 155 2156 157 HOH TIP A . G 4 HOH 156 2157 158 HOH TIP A . G 4 HOH 157 2158 159 HOH TIP A . G 4 HOH 158 2159 160 HOH TIP A . G 4 HOH 159 2160 161 HOH TIP A . G 4 HOH 160 2161 162 HOH TIP A . G 4 HOH 161 2162 163 HOH TIP A . G 4 HOH 162 2163 164 HOH TIP A . G 4 HOH 163 2164 165 HOH TIP A . G 4 HOH 164 2165 166 HOH TIP A . G 4 HOH 165 2166 167 HOH TIP A . G 4 HOH 166 2167 168 HOH TIP A . G 4 HOH 167 2168 169 HOH TIP A . G 4 HOH 168 2169 170 HOH TIP A . G 4 HOH 169 2170 171 HOH TIP A . G 4 HOH 170 2171 172 HOH TIP A . G 4 HOH 171 2172 173 HOH TIP A . G 4 HOH 172 2173 174 HOH TIP A . G 4 HOH 173 2174 175 HOH TIP A . G 4 HOH 174 2175 176 HOH TIP A . G 4 HOH 175 2176 177 HOH TIP A . G 4 HOH 176 2177 178 HOH TIP A . G 4 HOH 177 2178 179 HOH TIP A . G 4 HOH 178 2179 180 HOH TIP A . G 4 HOH 179 2180 181 HOH TIP A . G 4 HOH 180 2181 182 HOH TIP A . G 4 HOH 181 2182 183 HOH TIP A . G 4 HOH 182 2183 184 HOH TIP A . G 4 HOH 183 2184 185 HOH TIP A . G 4 HOH 184 2185 186 HOH TIP A . G 4 HOH 185 2186 187 HOH TIP A . G 4 HOH 186 2187 188 HOH TIP A . G 4 HOH 187 2188 189 HOH TIP A . G 4 HOH 188 2189 190 HOH TIP A . G 4 HOH 189 2190 191 HOH TIP A . G 4 HOH 190 2191 192 HOH TIP A . G 4 HOH 191 2192 193 HOH TIP A . G 4 HOH 192 2193 194 HOH TIP A . G 4 HOH 193 2194 195 HOH TIP A . G 4 HOH 194 2195 196 HOH TIP A . G 4 HOH 195 2196 197 HOH TIP A . G 4 HOH 196 2197 198 HOH TIP A . G 4 HOH 197 2198 199 HOH TIP A . G 4 HOH 198 2199 200 HOH TIP A . G 4 HOH 199 2200 201 HOH TIP A . G 4 HOH 200 2201 202 HOH TIP A . G 4 HOH 201 2202 203 HOH TIP A . G 4 HOH 202 2203 204 HOH TIP A . G 4 HOH 203 2204 205 HOH TIP A . G 4 HOH 204 2205 206 HOH TIP A . G 4 HOH 205 2206 208 HOH TIP A . G 4 HOH 206 2207 209 HOH TIP A . G 4 HOH 207 2208 210 HOH TIP A . G 4 HOH 208 2209 211 HOH TIP A . G 4 HOH 209 2210 212 HOH TIP A . G 4 HOH 210 2211 213 HOH TIP A . G 4 HOH 211 2212 214 HOH TIP A . G 4 HOH 212 2213 215 HOH TIP A . G 4 HOH 213 2214 216 HOH TIP A . G 4 HOH 214 2215 217 HOH TIP A . G 4 HOH 215 2216 218 HOH TIP A . G 4 HOH 216 2217 219 HOH TIP A . G 4 HOH 217 2218 220 HOH TIP A . G 4 HOH 218 2219 221 HOH TIP A . G 4 HOH 219 2220 222 HOH TIP A . G 4 HOH 220 2221 223 HOH TIP A . G 4 HOH 221 2222 224 HOH TIP A . G 4 HOH 222 2223 225 HOH TIP A . G 4 HOH 223 2224 226 HOH TIP A . G 4 HOH 224 2225 227 HOH TIP A . G 4 HOH 225 2226 228 HOH TIP A . G 4 HOH 226 2227 229 HOH TIP A . G 4 HOH 227 2228 230 HOH TIP A . G 4 HOH 228 2229 231 HOH TIP A . G 4 HOH 229 2230 232 HOH TIP A . G 4 HOH 230 2231 233 HOH TIP A . G 4 HOH 231 2232 234 HOH TIP A . G 4 HOH 232 2233 235 HOH TIP A . G 4 HOH 233 2234 236 HOH TIP A . G 4 HOH 234 2235 237 HOH TIP A . G 4 HOH 235 2236 238 HOH TIP A . G 4 HOH 236 2237 239 HOH TIP A . G 4 HOH 237 2238 240 HOH TIP A . G 4 HOH 238 2239 241 HOH TIP A . G 4 HOH 239 2240 242 HOH TIP A . G 4 HOH 240 2241 243 HOH TIP A . G 4 HOH 241 2242 244 HOH TIP A . G 4 HOH 242 2243 245 HOH TIP A . G 4 HOH 243 2244 246 HOH TIP A . G 4 HOH 244 2245 247 HOH TIP A . G 4 HOH 245 2246 248 HOH TIP A . G 4 HOH 246 2247 249 HOH TIP A . G 4 HOH 247 2248 250 HOH TIP A . G 4 HOH 248 2249 251 HOH TIP A . G 4 HOH 249 2250 252 HOH TIP A . G 4 HOH 250 2251 253 HOH TIP A . G 4 HOH 251 2252 254 HOH TIP A . G 4 HOH 252 2253 255 HOH TIP A . G 4 HOH 253 2254 256 HOH TIP A . G 4 HOH 254 2255 257 HOH TIP A . G 4 HOH 255 2256 258 HOH TIP A . G 4 HOH 256 2257 259 HOH TIP A . G 4 HOH 257 2258 260 HOH TIP A . G 4 HOH 258 2259 261 HOH TIP A . G 4 HOH 259 2260 262 HOH TIP A . G 4 HOH 260 2261 263 HOH TIP A . G 4 HOH 261 2262 264 HOH TIP A . G 4 HOH 262 2263 265 HOH TIP A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement . ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # _cell.entry_id 1LKP _cell.length_a 48.344 _cell.length_b 80.092 _cell.length_c 100.168 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LKP _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 # _exptl.entry_id 1LKP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 45.24 _exptl_crystal.density_Matthews 2.25 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.3 _exptl_crystal_grow.pdbx_details 'PEG 1450, MOPS, Sodium Azide, Sodium Dithionite, NADH, BenC, pH 7.3, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 95 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2000-09-19 _diffrn_detector.details 'Confocal Maxflux Optics' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Confocal Maxflux Optics' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1LKP _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.64 _reflns.number_obs 21668 _reflns.number_all 21668 _reflns.percent_possible_obs 89.4 _reflns.pdbx_Rmerge_I_obs 0.0580000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 46.5 _reflns.B_iso_Wilson_estimate 18.9 _reflns.pdbx_redundancy 6.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.64 _reflns_shell.d_res_low 1.70 _reflns_shell.percent_possible_all 46.2 _reflns_shell.Rmerge_I_obs 0.1860000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.1 _reflns_shell.pdbx_redundancy 1.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1098 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1LKP _refine.ls_number_reflns_obs 21509 _refine.ls_number_reflns_all 21668 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF 395688.30 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.ls_d_res_low 23.37 _refine.ls_d_res_high 1.64 _refine.ls_percent_reflns_obs 88.6 _refine.ls_R_factor_obs 0.1780000 _refine.ls_R_factor_all 0.1800000 _refine.ls_R_factor_R_work 0.1780000 _refine.ls_R_factor_R_free 0.2020000 _refine.ls_R_factor_R_free_error 0.005 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.9 _refine.ls_number_reflns_R_free 1700 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 17.5 _refine.aniso_B[1][1] 6.43 _refine.aniso_B[2][2] -3.20 _refine.aniso_B[3][3] -3.23 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.330348 _refine.solvent_model_param_bsol 33.8298 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'Rubrerythrin all-iron(II) form' _refine.pdbx_method_to_determine_struct 'Difference Fourier analysis' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1LKP _refine_analyze.Luzzati_coordinate_error_obs 0.17 _refine_analyze.Luzzati_sigma_a_obs 0.05 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.20 _refine_analyze.Luzzati_sigma_a_free 0.11 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1514 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 9 _refine_hist.number_atoms_solvent 262 _refine_hist.number_atoms_total 1785 _refine_hist.d_res_high 1.64 _refine_hist.d_res_low 23.37 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.1 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 19.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.73 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.02 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.48 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.04 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.06 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.64 _refine_ls_shell.d_res_low 1.74 _refine_ls_shell.number_reflns_R_work 1869 _refine_ls_shell.R_factor_R_work 0.2980000 _refine_ls_shell.percent_reflns_obs 51.1 _refine_ls_shell.R_factor_R_free 0.3030000 _refine_ls_shell.R_factor_R_free_error 0.024 _refine_ls_shell.percent_reflns_R_free 7.8 _refine_ls_shell.number_reflns_R_free 159 _refine_ls_shell.number_reflns_obs 2028 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 ION.PARAM ? 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM ? 'X-RAY DIFFRACTION' 4 CIS_PEPTIDE-RE-12-19.PARAM ? 'X-RAY DIFFRACTION' 5 NNN_XPLOR_PAR.PARAM ? 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1LKP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1LKP _struct.title 'Crystal structure of Desulfovibrio vulgaris rubrerythrin all-iron(II) form, azide adduct' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1LKP _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' _struct_keywords.text 'Rubrerythrin, reduced form, azide adduct, diiron, four-helix bundle, rubredoxin-like, ELECTRON TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RUBY_DESVH _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKSLKGSRTEKNILTAFAGESQARNRYNYFGGQAKKDGFVQISDIFAETADQEREHAKRLFKFLEGGDLEIVAAFPAGII ADTHANLIASAAGEHHEYTEMYPSFARIAREEGYEEIARVFASIAVAEEFHEKRFLDFARNIKEGRVFLREQATKWRCRN CGYVHEGTGAPELCPACAHPKAHFELLGINW ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession P24931 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1LKP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 191 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P24931 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 191 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 191 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA,PQS tetrameric 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4490 ? 1 MORE -68 ? 1 'SSA (A^2)' 17890 ? 2 'ABSA (A^2)' 14840 ? 2 MORE -174 ? 2 'SSA (A^2)' 29910 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,B,C,D,E,F,G 2 1,2,3,4 A,B,C,D,E,F,G # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1.0000000000 0.0000000000 0.0000000000 48.3440000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 48.3440000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 100.1680000000 4 'crystal symmetry operation' 4_556 x,-y,-z+1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 100.1680000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 7 ? ASP A 37 ? SER A 7 ASP A 37 1 ? 31 HELX_P HELX_P2 2 PHE A 39 ? LEU A 64 ? PHE A 39 LEU A 64 1 ? 26 HELX_P HELX_P3 3 ASP A 82 ? GLU A 100 ? ASP A 82 GLU A 100 1 ? 19 HELX_P HELX_P4 4 GLU A 100 ? GLY A 113 ? GLU A 100 GLY A 113 1 ? 14 HELX_P HELX_P5 5 TYR A 114 ? GLU A 144 ? TYR A 114 GLU A 144 1 ? 31 HELX_P HELX_P6 6 PRO A 180 ? ALA A 182 ? PRO A 180 ALA A 182 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLU 20 OE1 ? ? ? 1_555 E FE2 . FE ? ? A GLU 20 A FE2 601 1_555 ? ? ? ? ? ? ? 2.208 ? ? metalc2 metalc ? ? A GLU 20 OE2 ? ? ? 1_555 E FE2 . FE ? ? A GLU 20 A FE2 601 1_555 ? ? ? ? ? ? ? 2.248 ? ? metalc3 metalc ? ? A GLU 53 OE2 ? ? ? 1_555 D FE2 . FE ? ? A GLU 53 A FE2 600 1_555 ? ? ? ? ? ? ? 2.042 ? ? metalc4 metalc ? ? A GLU 53 OE1 ? ? ? 1_555 E FE2 . FE ? ? A GLU 53 A FE2 601 1_555 ? ? ? ? ? ? ? 2.098 ? ? metalc5 metalc ? ? A HIS 56 ND1 ? ? ? 1_555 E FE2 . FE ? ? A HIS 56 A FE2 601 1_555 ? ? ? ? ? ? ? 2.264 ? ? metalc6 metalc ? ? A GLU 94 OE1 ? ? ? 1_555 D FE2 . FE ? ? A GLU 94 A FE2 600 1_555 ? ? ? ? ? ? ? 2.195 ? ? metalc7 metalc ? ? A GLU 94 OE2 ? ? ? 1_555 D FE2 . FE ? ? A GLU 94 A FE2 600 1_555 ? ? ? ? ? ? ? 2.257 ? ? metalc8 metalc ? ? A GLU 128 OE1 ? ? ? 1_555 D FE2 . FE ? ? A GLU 128 A FE2 600 1_555 ? ? ? ? ? ? ? 2.083 ? ? metalc9 metalc ? ? A GLU 128 OE2 ? ? ? 1_555 E FE2 . FE ? ? A GLU 128 A FE2 601 1_555 ? ? ? ? ? ? ? 2.061 ? ? metalc10 metalc ? ? A HIS 131 ND1 ? ? ? 1_555 D FE2 . FE ? ? A HIS 131 A FE2 600 1_555 ? ? ? ? ? ? ? 2.229 ? ? metalc11 metalc ? ? A CYS 158 SG ? ? ? 1_555 F FE2 . FE ? ? A CYS 158 A FE2 401 1_555 ? ? ? ? ? ? ? 2.342 ? ? metalc12 metalc ? ? A CYS 161 SG ? ? ? 1_555 F FE2 . FE ? ? A CYS 161 A FE2 401 1_555 ? ? ? ? ? ? ? 2.256 ? ? metalc13 metalc ? ? A CYS 174 SG ? ? ? 1_555 F FE2 . FE ? ? A CYS 174 A FE2 401 1_555 ? ? ? ? ? ? ? 2.307 ? ? metalc14 metalc ? ? A CYS 177 SG ? ? ? 1_555 F FE2 . FE ? ? A CYS 177 A FE2 401 1_555 ? ? ? ? ? ? ? 2.336 ? ? metalc15 metalc ? ? D FE2 . FE ? ? ? 1_555 B AZI . N3 ? ? A FE2 600 A AZI 2000 1_555 ? ? ? ? ? ? ? 2.200 ? ? metalc16 metalc ? ? E FE2 . FE ? ? ? 1_555 B AZI . N1 ? ? A FE2 601 A AZI 2000 1_555 ? ? ? ? ? ? ? 2.213 ? ? metalc17 metalc ? ? E FE2 . FE ? ? ? 1_555 B AZI . N2 ? ? A FE2 601 A AZI 2000 1_555 ? ? ? ? ? ? ? 2.694 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLU 20 ? A GLU 20 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 OE2 ? A GLU 20 ? A GLU 20 ? 1_555 58.9 ? 2 OE1 ? A GLU 20 ? A GLU 20 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 OE1 ? A GLU 53 ? A GLU 53 ? 1_555 90.8 ? 3 OE2 ? A GLU 20 ? A GLU 20 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 OE1 ? A GLU 53 ? A GLU 53 ? 1_555 149.3 ? 4 OE1 ? A GLU 20 ? A GLU 20 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 ND1 ? A HIS 56 ? A HIS 56 ? 1_555 98.4 ? 5 OE2 ? A GLU 20 ? A GLU 20 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 ND1 ? A HIS 56 ? A HIS 56 ? 1_555 102.7 ? 6 OE1 ? A GLU 53 ? A GLU 53 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 ND1 ? A HIS 56 ? A HIS 56 ? 1_555 85.7 ? 7 OE1 ? A GLU 20 ? A GLU 20 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 OE2 ? A GLU 128 ? A GLU 128 ? 1_555 144.5 ? 8 OE2 ? A GLU 20 ? A GLU 20 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 OE2 ? A GLU 128 ? A GLU 128 ? 1_555 85.9 ? 9 OE1 ? A GLU 53 ? A GLU 53 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 OE2 ? A GLU 128 ? A GLU 128 ? 1_555 123.4 ? 10 ND1 ? A HIS 56 ? A HIS 56 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 OE2 ? A GLU 128 ? A GLU 128 ? 1_555 93.6 ? 11 OE1 ? A GLU 20 ? A GLU 20 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 N1 ? B AZI . ? A AZI 2000 ? 1_555 78.3 ? 12 OE2 ? A GLU 20 ? A GLU 20 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 N1 ? B AZI . ? A AZI 2000 ? 1_555 83.1 ? 13 OE1 ? A GLU 53 ? A GLU 53 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 N1 ? B AZI . ? A AZI 2000 ? 1_555 85.8 ? 14 ND1 ? A HIS 56 ? A HIS 56 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 N1 ? B AZI . ? A AZI 2000 ? 1_555 170.8 ? 15 OE2 ? A GLU 128 ? A GLU 128 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 N1 ? B AZI . ? A AZI 2000 ? 1_555 94.0 ? 16 OE1 ? A GLU 20 ? A GLU 20 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 N2 ? B AZI . ? A AZI 2000 ? 1_555 102.9 ? 17 OE2 ? A GLU 20 ? A GLU 20 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 N2 ? B AZI . ? A AZI 2000 ? 1_555 105.4 ? 18 OE1 ? A GLU 53 ? A GLU 53 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 N2 ? B AZI . ? A AZI 2000 ? 1_555 74.3 ? 19 ND1 ? A HIS 56 ? A HIS 56 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 N2 ? B AZI . ? A AZI 2000 ? 1_555 150.8 ? 20 OE2 ? A GLU 128 ? A GLU 128 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 N2 ? B AZI . ? A AZI 2000 ? 1_555 80.5 ? 21 N1 ? B AZI . ? A AZI 2000 ? 1_555 FE ? E FE2 . ? A FE2 601 ? 1_555 N2 ? B AZI . ? A AZI 2000 ? 1_555 27.0 ? 22 OE2 ? A GLU 53 ? A GLU 53 ? 1_555 FE ? D FE2 . ? A FE2 600 ? 1_555 OE1 ? A GLU 94 ? A GLU 94 ? 1_555 150.0 ? 23 OE2 ? A GLU 53 ? A GLU 53 ? 1_555 FE ? D FE2 . ? A FE2 600 ? 1_555 OE2 ? A GLU 94 ? A GLU 94 ? 1_555 92.6 ? 24 OE1 ? A GLU 94 ? A GLU 94 ? 1_555 FE ? D FE2 . ? A FE2 600 ? 1_555 OE2 ? A GLU 94 ? A GLU 94 ? 1_555 59.0 ? 25 OE2 ? A GLU 53 ? A GLU 53 ? 1_555 FE ? D FE2 . ? A FE2 600 ? 1_555 OE1 ? A GLU 128 ? A GLU 128 ? 1_555 120.2 ? 26 OE1 ? A GLU 94 ? A GLU 94 ? 1_555 FE ? D FE2 . ? A FE2 600 ? 1_555 OE1 ? A GLU 128 ? A GLU 128 ? 1_555 86.4 ? 27 OE2 ? A GLU 94 ? A GLU 94 ? 1_555 FE ? D FE2 . ? A FE2 600 ? 1_555 OE1 ? A GLU 128 ? A GLU 128 ? 1_555 145.0 ? 28 OE2 ? A GLU 53 ? A GLU 53 ? 1_555 FE ? D FE2 . ? A FE2 600 ? 1_555 ND1 ? A HIS 131 ? A HIS 131 ? 1_555 90.6 ? 29 OE1 ? A GLU 94 ? A GLU 94 ? 1_555 FE ? D FE2 . ? A FE2 600 ? 1_555 ND1 ? A HIS 131 ? A HIS 131 ? 1_555 103.9 ? 30 OE2 ? A GLU 94 ? A GLU 94 ? 1_555 FE ? D FE2 . ? A FE2 600 ? 1_555 ND1 ? A HIS 131 ? A HIS 131 ? 1_555 102.4 ? 31 OE1 ? A GLU 128 ? A GLU 128 ? 1_555 FE ? D FE2 . ? A FE2 600 ? 1_555 ND1 ? A HIS 131 ? A HIS 131 ? 1_555 90.1 ? 32 OE2 ? A GLU 53 ? A GLU 53 ? 1_555 FE ? D FE2 . ? A FE2 600 ? 1_555 N3 ? B AZI . ? A AZI 2000 ? 1_555 81.2 ? 33 OE1 ? A GLU 94 ? A GLU 94 ? 1_555 FE ? D FE2 . ? A FE2 600 ? 1_555 N3 ? B AZI . ? A AZI 2000 ? 1_555 82.9 ? 34 OE2 ? A GLU 94 ? A GLU 94 ? 1_555 FE ? D FE2 . ? A FE2 600 ? 1_555 N3 ? B AZI . ? A AZI 2000 ? 1_555 76.7 ? 35 OE1 ? A GLU 128 ? A GLU 128 ? 1_555 FE ? D FE2 . ? A FE2 600 ? 1_555 N3 ? B AZI . ? A AZI 2000 ? 1_555 95.2 ? 36 ND1 ? A HIS 131 ? A HIS 131 ? 1_555 FE ? D FE2 . ? A FE2 600 ? 1_555 N3 ? B AZI . ? A AZI 2000 ? 1_555 171.7 ? 37 SG ? A CYS 158 ? A CYS 158 ? 1_555 FE ? F FE2 . ? A FE2 401 ? 1_555 SG ? A CYS 161 ? A CYS 161 ? 1_555 115.0 ? 38 SG ? A CYS 158 ? A CYS 158 ? 1_555 FE ? F FE2 . ? A FE2 401 ? 1_555 SG ? A CYS 174 ? A CYS 174 ? 1_555 110.7 ? 39 SG ? A CYS 161 ? A CYS 161 ? 1_555 FE ? F FE2 . ? A FE2 401 ? 1_555 SG ? A CYS 174 ? A CYS 174 ? 1_555 104.8 ? 40 SG ? A CYS 158 ? A CYS 158 ? 1_555 FE ? F FE2 . ? A FE2 401 ? 1_555 SG ? A CYS 177 ? A CYS 177 ? 1_555 106.9 ? 41 SG ? A CYS 161 ? A CYS 161 ? 1_555 FE ? F FE2 . ? A FE2 401 ? 1_555 SG ? A CYS 177 ? A CYS 177 ? 1_555 109.8 ? 42 SG ? A CYS 174 ? A CYS 174 ? 1_555 FE ? F FE2 . ? A FE2 401 ? 1_555 SG ? A CYS 177 ? A CYS 177 ? 1_555 109.7 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 78 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 78 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 ILE _struct_mon_prot_cis.pdbx_label_seq_id_2 79 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 ILE _struct_mon_prot_cis.pdbx_auth_seq_id_2 79 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.25 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 164 ? GLY A 169 ? VAL A 164 GLY A 169 A 2 LEU A 149 ? CYS A 158 ? LEU A 149 CYS A 158 A 3 PHE A 184 ? LEU A 186 ? PHE A 184 LEU A 186 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O HIS A 165 ? O HIS A 165 N TRP A 156 ? N TRP A 156 A 2 3 N ARG A 157 ? N ARG A 157 O GLU A 185 ? O GLU A 185 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A AZI 2000 ? 7 'BINDING SITE FOR RESIDUE AZI A 2000' AC2 Software A AZI 2001 ? 4 'BINDING SITE FOR RESIDUE AZI A 2001' AC3 Software A FE2 600 ? 5 'BINDING SITE FOR RESIDUE FE2 A 600' AC4 Software A FE2 601 ? 5 'BINDING SITE FOR RESIDUE FE2 A 601' AC5 Software A FE2 401 ? 4 'BINDING SITE FOR RESIDUE FE2 A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 GLU A 20 ? GLU A 20 . ? 1_555 ? 2 AC1 7 GLU A 53 ? GLU A 53 . ? 1_555 ? 3 AC1 7 GLU A 94 ? GLU A 94 . ? 1_555 ? 4 AC1 7 GLU A 97 ? GLU A 97 . ? 1_555 ? 5 AC1 7 GLU A 128 ? GLU A 128 . ? 1_555 ? 6 AC1 7 FE2 D . ? FE2 A 600 . ? 1_555 ? 7 AC1 7 FE2 E . ? FE2 A 601 . ? 1_555 ? 8 AC2 4 ASP A 82 ? ASP A 82 . ? 1_555 ? 9 AC2 4 HIS A 84 ? HIS A 84 . ? 1_555 ? 10 AC2 4 ALA A 85 ? ALA A 85 . ? 1_555 ? 11 AC2 4 HOH G . ? HOH A 2159 . ? 1_555 ? 12 AC3 5 GLU A 53 ? GLU A 53 . ? 1_555 ? 13 AC3 5 GLU A 94 ? GLU A 94 . ? 1_555 ? 14 AC3 5 GLU A 128 ? GLU A 128 . ? 1_555 ? 15 AC3 5 HIS A 131 ? HIS A 131 . ? 1_555 ? 16 AC3 5 AZI B . ? AZI A 2000 . ? 1_555 ? 17 AC4 5 GLU A 20 ? GLU A 20 . ? 1_555 ? 18 AC4 5 GLU A 53 ? GLU A 53 . ? 1_555 ? 19 AC4 5 HIS A 56 ? HIS A 56 . ? 1_555 ? 20 AC4 5 GLU A 128 ? GLU A 128 . ? 1_555 ? 21 AC4 5 AZI B . ? AZI A 2000 . ? 1_555 ? 22 AC5 4 CYS A 158 ? CYS A 158 . ? 1_555 ? 23 AC5 4 CYS A 161 ? CYS A 161 . ? 1_555 ? 24 AC5 4 CYS A 174 ? CYS A 174 . ? 1_555 ? 25 AC5 4 CYS A 177 ? CYS A 177 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 5 ? ? -38.52 120.99 2 1 ALA A 81 ? ? -127.81 -156.13 3 1 TYR A 114 ? ? -107.79 74.11 4 1 ASN A 190 ? ? -109.73 64.59 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id MET _pdbx_unobs_or_zero_occ_residues.auth_seq_id 1 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id MET _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 AZI N1 N N N 74 AZI N2 N N N 75 AZI N3 N N N 76 CYS N N N N 77 CYS CA C N R 78 CYS C C N N 79 CYS O O N N 80 CYS CB C N N 81 CYS SG S N N 82 CYS OXT O N N 83 CYS H H N N 84 CYS H2 H N N 85 CYS HA H N N 86 CYS HB2 H N N 87 CYS HB3 H N N 88 CYS HG H N N 89 CYS HXT H N N 90 FE2 FE FE N N 91 GLN N N N N 92 GLN CA C N S 93 GLN C C N N 94 GLN O O N N 95 GLN CB C N N 96 GLN CG C N N 97 GLN CD C N N 98 GLN OE1 O N N 99 GLN NE2 N N N 100 GLN OXT O N N 101 GLN H H N N 102 GLN H2 H N N 103 GLN HA H N N 104 GLN HB2 H N N 105 GLN HB3 H N N 106 GLN HG2 H N N 107 GLN HG3 H N N 108 GLN HE21 H N N 109 GLN HE22 H N N 110 GLN HXT H N N 111 GLU N N N N 112 GLU CA C N S 113 GLU C C N N 114 GLU O O N N 115 GLU CB C N N 116 GLU CG C N N 117 GLU CD C N N 118 GLU OE1 O N N 119 GLU OE2 O N N 120 GLU OXT O N N 121 GLU H H N N 122 GLU H2 H N N 123 GLU HA H N N 124 GLU HB2 H N N 125 GLU HB3 H N N 126 GLU HG2 H N N 127 GLU HG3 H N N 128 GLU HE2 H N N 129 GLU HXT H N N 130 GLY N N N N 131 GLY CA C N N 132 GLY C C N N 133 GLY O O N N 134 GLY OXT O N N 135 GLY H H N N 136 GLY H2 H N N 137 GLY HA2 H N N 138 GLY HA3 H N N 139 GLY HXT H N N 140 HIS N N N N 141 HIS CA C N S 142 HIS C C N N 143 HIS O O N N 144 HIS CB C N N 145 HIS CG C Y N 146 HIS ND1 N Y N 147 HIS CD2 C Y N 148 HIS CE1 C Y N 149 HIS NE2 N Y N 150 HIS OXT O N N 151 HIS H H N N 152 HIS H2 H N N 153 HIS HA H N N 154 HIS HB2 H N N 155 HIS HB3 H N N 156 HIS HD1 H N N 157 HIS HD2 H N N 158 HIS HE1 H N N 159 HIS HE2 H N N 160 HIS HXT H N N 161 HOH O O N N 162 HOH H1 H N N 163 HOH H2 H N N 164 ILE N N N N 165 ILE CA C N S 166 ILE C C N N 167 ILE O O N N 168 ILE CB C N S 169 ILE CG1 C N N 170 ILE CG2 C N N 171 ILE CD1 C N N 172 ILE OXT O N N 173 ILE H H N N 174 ILE H2 H N N 175 ILE HA H N N 176 ILE HB H N N 177 ILE HG12 H N N 178 ILE HG13 H N N 179 ILE HG21 H N N 180 ILE HG22 H N N 181 ILE HG23 H N N 182 ILE HD11 H N N 183 ILE HD12 H N N 184 ILE HD13 H N N 185 ILE HXT H N N 186 LEU N N N N 187 LEU CA C N S 188 LEU C C N N 189 LEU O O N N 190 LEU CB C N N 191 LEU CG C N N 192 LEU CD1 C N N 193 LEU CD2 C N N 194 LEU OXT O N N 195 LEU H H N N 196 LEU H2 H N N 197 LEU HA H N N 198 LEU HB2 H N N 199 LEU HB3 H N N 200 LEU HG H N N 201 LEU HD11 H N N 202 LEU HD12 H N N 203 LEU HD13 H N N 204 LEU HD21 H N N 205 LEU HD22 H N N 206 LEU HD23 H N N 207 LEU HXT H N N 208 LYS N N N N 209 LYS CA C N S 210 LYS C C N N 211 LYS O O N N 212 LYS CB C N N 213 LYS CG C N N 214 LYS CD C N N 215 LYS CE C N N 216 LYS NZ N N N 217 LYS OXT O N N 218 LYS H H N N 219 LYS H2 H N N 220 LYS HA H N N 221 LYS HB2 H N N 222 LYS HB3 H N N 223 LYS HG2 H N N 224 LYS HG3 H N N 225 LYS HD2 H N N 226 LYS HD3 H N N 227 LYS HE2 H N N 228 LYS HE3 H N N 229 LYS HZ1 H N N 230 LYS HZ2 H N N 231 LYS HZ3 H N N 232 LYS HXT H N N 233 MET N N N N 234 MET CA C N S 235 MET C C N N 236 MET O O N N 237 MET CB C N N 238 MET CG C N N 239 MET SD S N N 240 MET CE C N N 241 MET OXT O N N 242 MET H H N N 243 MET H2 H N N 244 MET HA H N N 245 MET HB2 H N N 246 MET HB3 H N N 247 MET HG2 H N N 248 MET HG3 H N N 249 MET HE1 H N N 250 MET HE2 H N N 251 MET HE3 H N N 252 MET HXT H N N 253 PHE N N N N 254 PHE CA C N S 255 PHE C C N N 256 PHE O O N N 257 PHE CB C N N 258 PHE CG C Y N 259 PHE CD1 C Y N 260 PHE CD2 C Y N 261 PHE CE1 C Y N 262 PHE CE2 C Y N 263 PHE CZ C Y N 264 PHE OXT O N N 265 PHE H H N N 266 PHE H2 H N N 267 PHE HA H N N 268 PHE HB2 H N N 269 PHE HB3 H N N 270 PHE HD1 H N N 271 PHE HD2 H N N 272 PHE HE1 H N N 273 PHE HE2 H N N 274 PHE HZ H N N 275 PHE HXT H N N 276 PRO N N N N 277 PRO CA C N S 278 PRO C C N N 279 PRO O O N N 280 PRO CB C N N 281 PRO CG C N N 282 PRO CD C N N 283 PRO OXT O N N 284 PRO H H N N 285 PRO HA H N N 286 PRO HB2 H N N 287 PRO HB3 H N N 288 PRO HG2 H N N 289 PRO HG3 H N N 290 PRO HD2 H N N 291 PRO HD3 H N N 292 PRO HXT H N N 293 SER N N N N 294 SER CA C N S 295 SER C C N N 296 SER O O N N 297 SER CB C N N 298 SER OG O N N 299 SER OXT O N N 300 SER H H N N 301 SER H2 H N N 302 SER HA H N N 303 SER HB2 H N N 304 SER HB3 H N N 305 SER HG H N N 306 SER HXT H N N 307 THR N N N N 308 THR CA C N S 309 THR C C N N 310 THR O O N N 311 THR CB C N R 312 THR OG1 O N N 313 THR CG2 C N N 314 THR OXT O N N 315 THR H H N N 316 THR H2 H N N 317 THR HA H N N 318 THR HB H N N 319 THR HG1 H N N 320 THR HG21 H N N 321 THR HG22 H N N 322 THR HG23 H N N 323 THR HXT H N N 324 TRP N N N N 325 TRP CA C N S 326 TRP C C N N 327 TRP O O N N 328 TRP CB C N N 329 TRP CG C Y N 330 TRP CD1 C Y N 331 TRP CD2 C Y N 332 TRP NE1 N Y N 333 TRP CE2 C Y N 334 TRP CE3 C Y N 335 TRP CZ2 C Y N 336 TRP CZ3 C Y N 337 TRP CH2 C Y N 338 TRP OXT O N N 339 TRP H H N N 340 TRP H2 H N N 341 TRP HA H N N 342 TRP HB2 H N N 343 TRP HB3 H N N 344 TRP HD1 H N N 345 TRP HE1 H N N 346 TRP HE3 H N N 347 TRP HZ2 H N N 348 TRP HZ3 H N N 349 TRP HH2 H N N 350 TRP HXT H N N 351 TYR N N N N 352 TYR CA C N S 353 TYR C C N N 354 TYR O O N N 355 TYR CB C N N 356 TYR CG C Y N 357 TYR CD1 C Y N 358 TYR CD2 C Y N 359 TYR CE1 C Y N 360 TYR CE2 C Y N 361 TYR CZ C Y N 362 TYR OH O N N 363 TYR OXT O N N 364 TYR H H N N 365 TYR H2 H N N 366 TYR HA H N N 367 TYR HB2 H N N 368 TYR HB3 H N N 369 TYR HD1 H N N 370 TYR HD2 H N N 371 TYR HE1 H N N 372 TYR HE2 H N N 373 TYR HH H N N 374 TYR HXT H N N 375 VAL N N N N 376 VAL CA C N S 377 VAL C C N N 378 VAL O O N N 379 VAL CB C N N 380 VAL CG1 C N N 381 VAL CG2 C N N 382 VAL OXT O N N 383 VAL H H N N 384 VAL H2 H N N 385 VAL HA H N N 386 VAL HB H N N 387 VAL HG11 H N N 388 VAL HG12 H N N 389 VAL HG13 H N N 390 VAL HG21 H N N 391 VAL HG22 H N N 392 VAL HG23 H N N 393 VAL HXT H N N 394 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 AZI N1 N2 doub N N 70 AZI N2 N3 doub N N 71 CYS N CA sing N N 72 CYS N H sing N N 73 CYS N H2 sing N N 74 CYS CA C sing N N 75 CYS CA CB sing N N 76 CYS CA HA sing N N 77 CYS C O doub N N 78 CYS C OXT sing N N 79 CYS CB SG sing N N 80 CYS CB HB2 sing N N 81 CYS CB HB3 sing N N 82 CYS SG HG sing N N 83 CYS OXT HXT sing N N 84 GLN N CA sing N N 85 GLN N H sing N N 86 GLN N H2 sing N N 87 GLN CA C sing N N 88 GLN CA CB sing N N 89 GLN CA HA sing N N 90 GLN C O doub N N 91 GLN C OXT sing N N 92 GLN CB CG sing N N 93 GLN CB HB2 sing N N 94 GLN CB HB3 sing N N 95 GLN CG CD sing N N 96 GLN CG HG2 sing N N 97 GLN CG HG3 sing N N 98 GLN CD OE1 doub N N 99 GLN CD NE2 sing N N 100 GLN NE2 HE21 sing N N 101 GLN NE2 HE22 sing N N 102 GLN OXT HXT sing N N 103 GLU N CA sing N N 104 GLU N H sing N N 105 GLU N H2 sing N N 106 GLU CA C sing N N 107 GLU CA CB sing N N 108 GLU CA HA sing N N 109 GLU C O doub N N 110 GLU C OXT sing N N 111 GLU CB CG sing N N 112 GLU CB HB2 sing N N 113 GLU CB HB3 sing N N 114 GLU CG CD sing N N 115 GLU CG HG2 sing N N 116 GLU CG HG3 sing N N 117 GLU CD OE1 doub N N 118 GLU CD OE2 sing N N 119 GLU OE2 HE2 sing N N 120 GLU OXT HXT sing N N 121 GLY N CA sing N N 122 GLY N H sing N N 123 GLY N H2 sing N N 124 GLY CA C sing N N 125 GLY CA HA2 sing N N 126 GLY CA HA3 sing N N 127 GLY C O doub N N 128 GLY C OXT sing N N 129 GLY OXT HXT sing N N 130 HIS N CA sing N N 131 HIS N H sing N N 132 HIS N H2 sing N N 133 HIS CA C sing N N 134 HIS CA CB sing N N 135 HIS CA HA sing N N 136 HIS C O doub N N 137 HIS C OXT sing N N 138 HIS CB CG sing N N 139 HIS CB HB2 sing N N 140 HIS CB HB3 sing N N 141 HIS CG ND1 sing Y N 142 HIS CG CD2 doub Y N 143 HIS ND1 CE1 doub Y N 144 HIS ND1 HD1 sing N N 145 HIS CD2 NE2 sing Y N 146 HIS CD2 HD2 sing N N 147 HIS CE1 NE2 sing Y N 148 HIS CE1 HE1 sing N N 149 HIS NE2 HE2 sing N N 150 HIS OXT HXT sing N N 151 HOH O H1 sing N N 152 HOH O H2 sing N N 153 ILE N CA sing N N 154 ILE N H sing N N 155 ILE N H2 sing N N 156 ILE CA C sing N N 157 ILE CA CB sing N N 158 ILE CA HA sing N N 159 ILE C O doub N N 160 ILE C OXT sing N N 161 ILE CB CG1 sing N N 162 ILE CB CG2 sing N N 163 ILE CB HB sing N N 164 ILE CG1 CD1 sing N N 165 ILE CG1 HG12 sing N N 166 ILE CG1 HG13 sing N N 167 ILE CG2 HG21 sing N N 168 ILE CG2 HG22 sing N N 169 ILE CG2 HG23 sing N N 170 ILE CD1 HD11 sing N N 171 ILE CD1 HD12 sing N N 172 ILE CD1 HD13 sing N N 173 ILE OXT HXT sing N N 174 LEU N CA sing N N 175 LEU N H sing N N 176 LEU N H2 sing N N 177 LEU CA C sing N N 178 LEU CA CB sing N N 179 LEU CA HA sing N N 180 LEU C O doub N N 181 LEU C OXT sing N N 182 LEU CB CG sing N N 183 LEU CB HB2 sing N N 184 LEU CB HB3 sing N N 185 LEU CG CD1 sing N N 186 LEU CG CD2 sing N N 187 LEU CG HG sing N N 188 LEU CD1 HD11 sing N N 189 LEU CD1 HD12 sing N N 190 LEU CD1 HD13 sing N N 191 LEU CD2 HD21 sing N N 192 LEU CD2 HD22 sing N N 193 LEU CD2 HD23 sing N N 194 LEU OXT HXT sing N N 195 LYS N CA sing N N 196 LYS N H sing N N 197 LYS N H2 sing N N 198 LYS CA C sing N N 199 LYS CA CB sing N N 200 LYS CA HA sing N N 201 LYS C O doub N N 202 LYS C OXT sing N N 203 LYS CB CG sing N N 204 LYS CB HB2 sing N N 205 LYS CB HB3 sing N N 206 LYS CG CD sing N N 207 LYS CG HG2 sing N N 208 LYS CG HG3 sing N N 209 LYS CD CE sing N N 210 LYS CD HD2 sing N N 211 LYS CD HD3 sing N N 212 LYS CE NZ sing N N 213 LYS CE HE2 sing N N 214 LYS CE HE3 sing N N 215 LYS NZ HZ1 sing N N 216 LYS NZ HZ2 sing N N 217 LYS NZ HZ3 sing N N 218 LYS OXT HXT sing N N 219 MET N CA sing N N 220 MET N H sing N N 221 MET N H2 sing N N 222 MET CA C sing N N 223 MET CA CB sing N N 224 MET CA HA sing N N 225 MET C O doub N N 226 MET C OXT sing N N 227 MET CB CG sing N N 228 MET CB HB2 sing N N 229 MET CB HB3 sing N N 230 MET CG SD sing N N 231 MET CG HG2 sing N N 232 MET CG HG3 sing N N 233 MET SD CE sing N N 234 MET CE HE1 sing N N 235 MET CE HE2 sing N N 236 MET CE HE3 sing N N 237 MET OXT HXT sing N N 238 PHE N CA sing N N 239 PHE N H sing N N 240 PHE N H2 sing N N 241 PHE CA C sing N N 242 PHE CA CB sing N N 243 PHE CA HA sing N N 244 PHE C O doub N N 245 PHE C OXT sing N N 246 PHE CB CG sing N N 247 PHE CB HB2 sing N N 248 PHE CB HB3 sing N N 249 PHE CG CD1 doub Y N 250 PHE CG CD2 sing Y N 251 PHE CD1 CE1 sing Y N 252 PHE CD1 HD1 sing N N 253 PHE CD2 CE2 doub Y N 254 PHE CD2 HD2 sing N N 255 PHE CE1 CZ doub Y N 256 PHE CE1 HE1 sing N N 257 PHE CE2 CZ sing Y N 258 PHE CE2 HE2 sing N N 259 PHE CZ HZ sing N N 260 PHE OXT HXT sing N N 261 PRO N CA sing N N 262 PRO N CD sing N N 263 PRO N H sing N N 264 PRO CA C sing N N 265 PRO CA CB sing N N 266 PRO CA HA sing N N 267 PRO C O doub N N 268 PRO C OXT sing N N 269 PRO CB CG sing N N 270 PRO CB HB2 sing N N 271 PRO CB HB3 sing N N 272 PRO CG CD sing N N 273 PRO CG HG2 sing N N 274 PRO CG HG3 sing N N 275 PRO CD HD2 sing N N 276 PRO CD HD3 sing N N 277 PRO OXT HXT sing N N 278 SER N CA sing N N 279 SER N H sing N N 280 SER N H2 sing N N 281 SER CA C sing N N 282 SER CA CB sing N N 283 SER CA HA sing N N 284 SER C O doub N N 285 SER C OXT sing N N 286 SER CB OG sing N N 287 SER CB HB2 sing N N 288 SER CB HB3 sing N N 289 SER OG HG sing N N 290 SER OXT HXT sing N N 291 THR N CA sing N N 292 THR N H sing N N 293 THR N H2 sing N N 294 THR CA C sing N N 295 THR CA CB sing N N 296 THR CA HA sing N N 297 THR C O doub N N 298 THR C OXT sing N N 299 THR CB OG1 sing N N 300 THR CB CG2 sing N N 301 THR CB HB sing N N 302 THR OG1 HG1 sing N N 303 THR CG2 HG21 sing N N 304 THR CG2 HG22 sing N N 305 THR CG2 HG23 sing N N 306 THR OXT HXT sing N N 307 TRP N CA sing N N 308 TRP N H sing N N 309 TRP N H2 sing N N 310 TRP CA C sing N N 311 TRP CA CB sing N N 312 TRP CA HA sing N N 313 TRP C O doub N N 314 TRP C OXT sing N N 315 TRP CB CG sing N N 316 TRP CB HB2 sing N N 317 TRP CB HB3 sing N N 318 TRP CG CD1 doub Y N 319 TRP CG CD2 sing Y N 320 TRP CD1 NE1 sing Y N 321 TRP CD1 HD1 sing N N 322 TRP CD2 CE2 doub Y N 323 TRP CD2 CE3 sing Y N 324 TRP NE1 CE2 sing Y N 325 TRP NE1 HE1 sing N N 326 TRP CE2 CZ2 sing Y N 327 TRP CE3 CZ3 doub Y N 328 TRP CE3 HE3 sing N N 329 TRP CZ2 CH2 doub Y N 330 TRP CZ2 HZ2 sing N N 331 TRP CZ3 CH2 sing Y N 332 TRP CZ3 HZ3 sing N N 333 TRP CH2 HH2 sing N N 334 TRP OXT HXT sing N N 335 TYR N CA sing N N 336 TYR N H sing N N 337 TYR N H2 sing N N 338 TYR CA C sing N N 339 TYR CA CB sing N N 340 TYR CA HA sing N N 341 TYR C O doub N N 342 TYR C OXT sing N N 343 TYR CB CG sing N N 344 TYR CB HB2 sing N N 345 TYR CB HB3 sing N N 346 TYR CG CD1 doub Y N 347 TYR CG CD2 sing Y N 348 TYR CD1 CE1 sing Y N 349 TYR CD1 HD1 sing N N 350 TYR CD2 CE2 doub Y N 351 TYR CD2 HD2 sing N N 352 TYR CE1 CZ doub Y N 353 TYR CE1 HE1 sing N N 354 TYR CE2 CZ sing Y N 355 TYR CE2 HE2 sing N N 356 TYR CZ OH sing N N 357 TYR OH HH sing N N 358 TYR OXT HXT sing N N 359 VAL N CA sing N N 360 VAL N H sing N N 361 VAL N H2 sing N N 362 VAL CA C sing N N 363 VAL CA CB sing N N 364 VAL CA HA sing N N 365 VAL C O doub N N 366 VAL C OXT sing N N 367 VAL CB CG1 sing N N 368 VAL CB CG2 sing N N 369 VAL CB HB sing N N 370 VAL CG1 HG11 sing N N 371 VAL CG1 HG12 sing N N 372 VAL CG1 HG13 sing N N 373 VAL CG2 HG21 sing N N 374 VAL CG2 HG22 sing N N 375 VAL CG2 HG23 sing N N 376 VAL OXT HXT sing N N 377 # _pdbx_initial_refinement_model.accession_code 1RYT _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.details 'Rubrerythrin all-iron(II) form' # _atom_sites.entry_id 1LKP _atom_sites.fract_transf_matrix[1][1] 0.020685 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012486 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009983 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O S # loop_