HEADER TRANSCRIPTION 26-APR-02 1LKY TITLE STRUCTURE OF THE WILD-TYPE TEL-SAM POLYMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION FACTOR ETV6; COMPND 3 CHAIN: A, C, E; COMPND 4 FRAGMENT: POINTED DOMAIN; COMPND 5 SYNONYM: TEL SAM; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: MUTANT V80R; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: TRANSCRIPTION FACTOR ETV6; COMPND 11 CHAIN: B, D, F; COMPND 12 FRAGMENT: POINTED DOMAIN; COMPND 13 SYNONYM: TEL SAM; COMPND 14 ENGINEERED: YES; COMPND 15 MUTATION: YES; COMPND 16 OTHER_DETAILS: MUTANT A61D SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LEUKEMIA, TYROSINE KINASE, TRANSCRIPTIONAL REPRESSION, DRUG DESIGN, KEYWDS 2 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR H.H.TRAN,C.A.KIM,S.FAHAM,J.U.BOWIE REVDAT 6 16-AUG-23 1LKY 1 REMARK REVDAT 5 27-OCT-21 1LKY 1 REMARK SEQADV REVDAT 4 16-JUN-09 1LKY 1 REMARK REVDAT 3 24-FEB-09 1LKY 1 VERSN REVDAT 2 15-FEB-05 1LKY 1 JRNL REVDAT 1 12-JUN-02 1LKY 0 JRNL AUTH H.H.TRAN,C.A.KIM JRNL TITL NATIVE INTERFACE OF THE SAM DOMAIN POLYMER OF TEL. JRNL REF BMC STRUCT.BIOL. V. 2 5 2002 JRNL REFN ESSN 1472-6807 JRNL PMID 12193272 JRNL DOI 10.1186/1472-6807-2-5 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 89.3 REMARK 3 NUMBER OF REFLECTIONS : 26185 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2582 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.44 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 77.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3396 REMARK 3 BIN R VALUE (WORKING SET) : 0.3470 REMARK 3 BIN FREE R VALUE : 0.3730 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 381 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.019 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3909 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 55 REMARK 3 SOLVENT ATOMS : 132 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 21.61000 REMARK 3 B22 (A**2) : -11.11000 REMARK 3 B33 (A**2) : -10.50000 REMARK 3 B12 (A**2) : -6.88000 REMARK 3 B13 (A**2) : -8.49000 REMARK 3 B23 (A**2) : -2.19000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.39 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.44 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.100 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 19.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.700 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 62.79 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CIS_PEPTIDE_HEX.PARAM REMARK 3 PARAMETER FILE 3 : WATER.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1LKY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-APR-02. REMARK 100 THE DEPOSITION ID IS D_1000016040. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-APR-01 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : YALE MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53910 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1JI7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% PEG 4000 2.0 M AMMONIUM SULFATE, PH REMARK 280 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -162.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 9.06765 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -59.60522 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 -34.05385 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 -30.29996 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -54.14784 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -174.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 -43.12150 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 29.30526 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 -54.14784 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -167.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 -34.05385 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 -30.29996 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 -54.14784 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -145.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 9.06765 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -59.60522 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 43.12150 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 -29.30526 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 54.14784 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -154.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 9.06765 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -59.60522 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 -43.12150 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 29.30526 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -54.14784 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 17 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 90 CG CD CE NZ REMARK 470 LYS B 90 CG CD CE NZ REMARK 470 LYS C 90 CG CD CE NZ REMARK 470 LYS D 90 CG CD CE NZ REMARK 470 LYS E 90 CG CD CE NZ REMARK 470 LYS F 90 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER A 15 O4 SO4 F 306 1455 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 16 -78.19 -60.25 REMARK 500 ARG A 17 119.55 86.15 REMARK 500 ASN A 53 7.64 -63.05 REMARK 500 SER B 52 45.45 -72.24 REMARK 500 GLU B 56 61.21 -69.29 REMARK 500 SER C 52 -30.95 -37.89 REMARK 500 PHE C 55 78.06 -119.56 REMARK 500 ILE D 16 -54.77 -130.70 REMARK 500 ARG D 17 101.36 44.97 REMARK 500 MET D 57 155.28 173.14 REMARK 500 ASN D 58 -161.28 -78.50 REMARK 500 LEU D 63 -9.32 -56.80 REMARK 500 SER D 74 92.66 -167.17 REMARK 500 ARG E 17 64.60 -114.47 REMARK 500 SER E 46 38.57 36.48 REMARK 500 ASN E 53 -7.37 -57.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 F 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 F 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 313 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 F 314 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 315 DBREF 1LKY A 15 91 UNP P41212 ETV6_HUMAN 47 123 DBREF 1LKY C 15 91 UNP P41212 ETV6_HUMAN 47 123 DBREF 1LKY E 15 91 UNP P41212 ETV6_HUMAN 47 123 DBREF 1LKY B 15 91 UNP P41212 ETV6_HUMAN 47 123 DBREF 1LKY D 15 91 UNP P41212 ETV6_HUMAN 47 123 DBREF 1LKY F 15 91 UNP P41212 ETV6_HUMAN 47 123 SEQADV 1LKY ARG A 80 UNP P41212 VAL 112 ENGINEERED MUTATION SEQADV 1LKY ARG C 80 UNP P41212 VAL 112 ENGINEERED MUTATION SEQADV 1LKY ARG E 80 UNP P41212 VAL 112 ENGINEERED MUTATION SEQADV 1LKY ASP B 61 UNP P41212 ALA 93 ENGINEERED MUTATION SEQADV 1LKY ASP D 61 UNP P41212 ALA 93 ENGINEERED MUTATION SEQADV 1LKY ASP F 61 UNP P41212 ALA 93 ENGINEERED MUTATION SEQRES 1 A 77 SER ILE ARG LEU PRO ALA HIS LEU ARG LEU GLN PRO ILE SEQRES 2 A 77 TYR TRP SER ARG ASP ASP VAL ALA GLN TRP LEU LYS TRP SEQRES 3 A 77 ALA GLU ASN GLU PHE SER LEU ARG PRO ILE ASP SER ASN SEQRES 4 A 77 THR PHE GLU MET ASN GLY LYS ALA LEU LEU LEU LEU THR SEQRES 5 A 77 LYS GLU ASP PHE ARG TYR ARG SER PRO HIS SER GLY ASP SEQRES 6 A 77 ARG LEU TYR GLU LEU LEU GLN HIS ILE LEU LYS GLN SEQRES 1 B 77 SER ILE ARG LEU PRO ALA HIS LEU ARG LEU GLN PRO ILE SEQRES 2 B 77 TYR TRP SER ARG ASP ASP VAL ALA GLN TRP LEU LYS TRP SEQRES 3 B 77 ALA GLU ASN GLU PHE SER LEU ARG PRO ILE ASP SER ASN SEQRES 4 B 77 THR PHE GLU MET ASN GLY LYS ASP LEU LEU LEU LEU THR SEQRES 5 B 77 LYS GLU ASP PHE ARG TYR ARG SER PRO HIS SER GLY ASP SEQRES 6 B 77 VAL LEU TYR GLU LEU LEU GLN HIS ILE LEU LYS GLN SEQRES 1 C 77 SER ILE ARG LEU PRO ALA HIS LEU ARG LEU GLN PRO ILE SEQRES 2 C 77 TYR TRP SER ARG ASP ASP VAL ALA GLN TRP LEU LYS TRP SEQRES 3 C 77 ALA GLU ASN GLU PHE SER LEU ARG PRO ILE ASP SER ASN SEQRES 4 C 77 THR PHE GLU MET ASN GLY LYS ALA LEU LEU LEU LEU THR SEQRES 5 C 77 LYS GLU ASP PHE ARG TYR ARG SER PRO HIS SER GLY ASP SEQRES 6 C 77 ARG LEU TYR GLU LEU LEU GLN HIS ILE LEU LYS GLN SEQRES 1 D 77 SER ILE ARG LEU PRO ALA HIS LEU ARG LEU GLN PRO ILE SEQRES 2 D 77 TYR TRP SER ARG ASP ASP VAL ALA GLN TRP LEU LYS TRP SEQRES 3 D 77 ALA GLU ASN GLU PHE SER LEU ARG PRO ILE ASP SER ASN SEQRES 4 D 77 THR PHE GLU MET ASN GLY LYS ASP LEU LEU LEU LEU THR SEQRES 5 D 77 LYS GLU ASP PHE ARG TYR ARG SER PRO HIS SER GLY ASP SEQRES 6 D 77 VAL LEU TYR GLU LEU LEU GLN HIS ILE LEU LYS GLN SEQRES 1 E 77 SER ILE ARG LEU PRO ALA HIS LEU ARG LEU GLN PRO ILE SEQRES 2 E 77 TYR TRP SER ARG ASP ASP VAL ALA GLN TRP LEU LYS TRP SEQRES 3 E 77 ALA GLU ASN GLU PHE SER LEU ARG PRO ILE ASP SER ASN SEQRES 4 E 77 THR PHE GLU MET ASN GLY LYS ALA LEU LEU LEU LEU THR SEQRES 5 E 77 LYS GLU ASP PHE ARG TYR ARG SER PRO HIS SER GLY ASP SEQRES 6 E 77 ARG LEU TYR GLU LEU LEU GLN HIS ILE LEU LYS GLN SEQRES 1 F 77 SER ILE ARG LEU PRO ALA HIS LEU ARG LEU GLN PRO ILE SEQRES 2 F 77 TYR TRP SER ARG ASP ASP VAL ALA GLN TRP LEU LYS TRP SEQRES 3 F 77 ALA GLU ASN GLU PHE SER LEU ARG PRO ILE ASP SER ASN SEQRES 4 F 77 THR PHE GLU MET ASN GLY LYS ASP LEU LEU LEU LEU THR SEQRES 5 F 77 LYS GLU ASP PHE ARG TYR ARG SER PRO HIS SER GLY ASP SEQRES 6 F 77 VAL LEU TYR GLU LEU LEU GLN HIS ILE LEU LYS GLN HET SO4 A 301 5 HET SO4 A 302 5 HET SO4 B 308 5 HET SO4 B 309 5 HET SO4 C 305 5 HET SO4 E 307 5 HET SO4 E 313 5 HET SO4 E 315 5 HET SO4 F 306 5 HET SO4 F 312 5 HET SO4 F 314 5 HETNAM SO4 SULFATE ION FORMUL 7 SO4 11(O4 S 2-) FORMUL 18 HOH *132(H2 O) HELIX 1 1 PRO A 19 ARG A 23 5 5 HELIX 2 2 GLN A 25 TRP A 29 5 5 HELIX 3 3 SER A 30 PHE A 45 1 16 HELIX 4 4 ASP A 51 PHE A 55 5 5 HELIX 5 5 ASN A 58 LEU A 63 1 6 HELIX 6 6 THR A 66 SER A 74 1 9 HELIX 7 7 SER A 77 GLN A 91 1 15 HELIX 8 8 PRO B 19 ARG B 23 5 5 HELIX 9 9 GLN B 25 TRP B 29 5 5 HELIX 10 10 SER B 30 PHE B 45 1 16 HELIX 11 11 ASN B 58 LEU B 63 1 6 HELIX 12 12 THR B 66 SER B 74 1 9 HELIX 13 13 SER B 77 GLN B 91 1 15 HELIX 14 14 PRO C 19 ARG C 23 5 5 HELIX 15 15 GLN C 25 TRP C 29 5 5 HELIX 16 16 SER C 30 PHE C 45 1 16 HELIX 17 17 ASN C 58 LEU C 63 1 6 HELIX 18 18 THR C 66 SER C 74 1 9 HELIX 19 19 SER C 77 LYS C 90 1 14 HELIX 20 20 ALA D 20 LEU D 24 5 5 HELIX 21 21 GLN D 25 TRP D 29 5 5 HELIX 22 22 SER D 30 PHE D 45 1 16 HELIX 23 23 ASP D 51 PHE D 55 5 5 HELIX 24 24 ASN D 58 LEU D 63 1 6 HELIX 25 25 THR D 66 SER D 74 1 9 HELIX 26 26 SER D 77 GLN D 91 1 15 HELIX 27 27 PRO E 19 ARG E 23 5 5 HELIX 28 28 GLN E 25 TRP E 29 5 5 HELIX 29 29 SER E 30 PHE E 45 1 16 HELIX 30 30 ASP E 51 PHE E 55 5 5 HELIX 31 31 ASN E 58 LEU E 63 1 6 HELIX 32 32 THR E 66 SER E 74 1 9 HELIX 33 33 SER E 77 GLN E 91 1 15 HELIX 34 34 PRO F 19 ARG F 23 5 5 HELIX 35 35 GLN F 25 TRP F 29 5 5 HELIX 36 36 SER F 30 PHE F 45 1 16 HELIX 37 37 ASP F 51 GLU F 56 5 6 HELIX 38 38 ASN F 58 LEU F 63 1 6 HELIX 39 39 THR F 66 SER F 74 1 9 HELIX 40 40 SER F 77 GLN F 91 1 15 SITE 1 AC1 3 ARG A 73 PRO A 75 HOH A 307 SITE 1 AC2 6 LYS A 39 SER A 52 SER C 30 ARG C 31 SITE 2 AC2 6 ASN C 58 SER D 46 SITE 1 AC3 4 PRO A 19 ALA A 20 LEU C 24 GLN C 25 SITE 1 AC4 4 SER A 15 ILE A 16 HOH A 308 HOH F 337 SITE 1 AC5 6 LEU A 24 GLN A 25 PRO E 19 ALA E 20 SITE 2 AC5 6 HIS E 21 GLN E 36 SITE 1 AC6 4 ARG B 48 SER B 74 PRO B 75 HIS B 76 SITE 1 AC7 7 ASP B 69 ARG B 73 LYS C 67 ASP C 79 SITE 2 AC7 7 ARG C 80 GLU C 83 HOH C 319 SITE 1 AC8 4 LEU B 24 GLN B 25 TYR B 28 HOH B 317 SITE 1 AC9 6 ARG C 23 SER E 30 ARG E 31 ASN E 58 SITE 2 AC9 6 HOH E 317 SER F 46 SITE 1 BC1 5 SER B 30 ARG B 31 ASN B 58 LYS F 39 SITE 2 BC1 5 SER F 52 SITE 1 BC2 5 SER A 30 ARG A 31 ASN A 58 SER B 46 SITE 2 BC2 5 LYS E 39 CRYST1 52.752 60.291 62.318 116.21 98.89 98.65 P 1 3 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018957 0.002882 0.004934 0.00000 SCALE2 0.000000 0.016777 0.009081 0.00000 SCALE3 0.000000 0.000000 0.018469 0.00000