data_1LLC # _entry.id 1LLC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.374 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1LLC pdb_00001llc 10.2210/pdb1llc/pdb WWPDB D_1000174752 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1LLC _pdbx_database_status.recvd_initial_deposition_date 1988-11-21 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Buehner, M.' 1 'Hecht, H.J.' 2 'Hensel, R.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'STRUCTURE DETERMINATION OF THE ALLOSTERIC L-LACTATE DEHYDROGENASE FROM LACTOBACILLUS-CASEI AT 3A RESOLUTION.' 'Acta Crystallogr.,Sect.A' 40 32 32 1984 ACACEQ DK 0108-7673 0621 ? -1 ? 1 ;Die Strukturbestimmung Der Allosterischen L-Laktat-Dehydrogenase Aus Lactobacillus Casei Mittels Molekularem Ersatz. Phasenexpansion Und Phasenverfeinerung Mittels Nichtkristallographischer Symmetrie (German) ; Z.Kristallogr. 178 44 ? 1987 ZKKKAJ GE 0044-2968 0005 ? ? ? 2 'The Complete Primary Structure of the Allosteric L-Lactate Dehydrogenase from Lactobacillus Casei' Eur.J.Biochem. 134 503 ? 1983 EJBCAI IX 0014-2956 0262 ? ? ? 3 ;Crystallization and Preliminary Crystallographic Analysis at Low Resolution of the Allosteric L-Lactate Dehydrogenase from Lactobacillus Casei ; J.Mol.Biol. 162 189 ? 1982 JMOBAK UK 0022-2836 0070 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Buehner, M.' 1 ? primary 'Hecht, H.J.' 2 ? 1 'Buehner, M.' 3 ? 1 'Hecht, H.J.' 4 ? 2 'Hensel, R.' 5 ? 2 'Mayr, U.' 6 ? 2 'Yang, C.' 7 ? 3 'Buehner, M.' 8 ? 3 'Hecht, H.-J.' 9 ? 3 'Hensel, R.' 10 ? 3 'Mayr, U.' 11 ? # _cell.entry_id 1LLC _cell.length_a 169.200 _cell.length_b 85.380 _cell.length_c 180.180 _cell.angle_alpha 90.00 _cell.angle_beta 91.30 _cell.angle_gamma 90.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LLC _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'L-LACTATE DEHYDROGENASE' 35479.359 1 1.1.1.27 ? ? ? 2 non-polymer man 1,6-di-O-phosphono-alpha-D-fructofuranose 340.116 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ASITDKDHQKVILVGDGAVGSSYAFAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVV ITAGAPKQPGETRLDLVNKNLKILKSIVDPIVDSGFNLIFLVAANPVDILTYATWKLSGFPKNRVVGSGTSLDTARFRQS IAEMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEIIKLKGATFYGIAT ALARISKAILNDENAVLPLSVYMDGQYGINDLYIGTPAVINRNGIQNILEIPLTDHEEESMQKSASQLKKVLTDAFAKND IETRQ ; _entity_poly.pdbx_seq_one_letter_code_can ;ASITDKDHQKVILVGDGAVGSSYAFAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVV ITAGAPKQPGETRLDLVNKNLKILKSIVDPIVDSGFNLIFLVAANPVDILTYATWKLSGFPKNRVVGSGTSLDTARFRQS IAEMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEIIKLKGATFYGIAT ALARISKAILNDENAVLPLSVYMDGQYGINDLYIGTPAVINRNGIQNILEIPLTDHEEESMQKSASQLKKVLTDAFAKND IETRQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 SER n 1 3 ILE n 1 4 THR n 1 5 ASP n 1 6 LYS n 1 7 ASP n 1 8 HIS n 1 9 GLN n 1 10 LYS n 1 11 VAL n 1 12 ILE n 1 13 LEU n 1 14 VAL n 1 15 GLY n 1 16 ASP n 1 17 GLY n 1 18 ALA n 1 19 VAL n 1 20 GLY n 1 21 SER n 1 22 SER n 1 23 TYR n 1 24 ALA n 1 25 PHE n 1 26 ALA n 1 27 MET n 1 28 VAL n 1 29 LEU n 1 30 GLN n 1 31 GLY n 1 32 ILE n 1 33 ALA n 1 34 GLN n 1 35 GLU n 1 36 ILE n 1 37 GLY n 1 38 ILE n 1 39 VAL n 1 40 ASP n 1 41 ILE n 1 42 PHE n 1 43 LYS n 1 44 ASP n 1 45 LYS n 1 46 THR n 1 47 LYS n 1 48 GLY n 1 49 ASP n 1 50 ALA n 1 51 ILE n 1 52 ASP n 1 53 LEU n 1 54 SER n 1 55 ASN n 1 56 ALA n 1 57 LEU n 1 58 PRO n 1 59 PHE n 1 60 THR n 1 61 SER n 1 62 PRO n 1 63 LYS n 1 64 LYS n 1 65 ILE n 1 66 TYR n 1 67 SER n 1 68 ALA n 1 69 GLU n 1 70 TYR n 1 71 SER n 1 72 ASP n 1 73 ALA n 1 74 LYS n 1 75 ASP n 1 76 ALA n 1 77 ASP n 1 78 LEU n 1 79 VAL n 1 80 VAL n 1 81 ILE n 1 82 THR n 1 83 ALA n 1 84 GLY n 1 85 ALA n 1 86 PRO n 1 87 LYS n 1 88 GLN n 1 89 PRO n 1 90 GLY n 1 91 GLU n 1 92 THR n 1 93 ARG n 1 94 LEU n 1 95 ASP n 1 96 LEU n 1 97 VAL n 1 98 ASN n 1 99 LYS n 1 100 ASN n 1 101 LEU n 1 102 LYS n 1 103 ILE n 1 104 LEU n 1 105 LYS n 1 106 SER n 1 107 ILE n 1 108 VAL n 1 109 ASP n 1 110 PRO n 1 111 ILE n 1 112 VAL n 1 113 ASP n 1 114 SER n 1 115 GLY n 1 116 PHE n 1 117 ASN n 1 118 LEU n 1 119 ILE n 1 120 PHE n 1 121 LEU n 1 122 VAL n 1 123 ALA n 1 124 ALA n 1 125 ASN n 1 126 PRO n 1 127 VAL n 1 128 ASP n 1 129 ILE n 1 130 LEU n 1 131 THR n 1 132 TYR n 1 133 ALA n 1 134 THR n 1 135 TRP n 1 136 LYS n 1 137 LEU n 1 138 SER n 1 139 GLY n 1 140 PHE n 1 141 PRO n 1 142 LYS n 1 143 ASN n 1 144 ARG n 1 145 VAL n 1 146 VAL n 1 147 GLY n 1 148 SER n 1 149 GLY n 1 150 THR n 1 151 SER n 1 152 LEU n 1 153 ASP n 1 154 THR n 1 155 ALA n 1 156 ARG n 1 157 PHE n 1 158 ARG n 1 159 GLN n 1 160 SER n 1 161 ILE n 1 162 ALA n 1 163 GLU n 1 164 MET n 1 165 VAL n 1 166 ASN n 1 167 VAL n 1 168 ASP n 1 169 ALA n 1 170 ARG n 1 171 SER n 1 172 VAL n 1 173 HIS n 1 174 ALA n 1 175 TYR n 1 176 ILE n 1 177 MET n 1 178 GLY n 1 179 GLU n 1 180 HIS n 1 181 GLY n 1 182 ASP n 1 183 THR n 1 184 GLU n 1 185 PHE n 1 186 PRO n 1 187 VAL n 1 188 TRP n 1 189 SER n 1 190 HIS n 1 191 ALA n 1 192 ASN n 1 193 ILE n 1 194 GLY n 1 195 GLY n 1 196 VAL n 1 197 THR n 1 198 ILE n 1 199 ALA n 1 200 GLU n 1 201 TRP n 1 202 VAL n 1 203 LYS n 1 204 ALA n 1 205 HIS n 1 206 PRO n 1 207 GLU n 1 208 ILE n 1 209 LYS n 1 210 GLU n 1 211 ASP n 1 212 LYS n 1 213 LEU n 1 214 VAL n 1 215 LYS n 1 216 MET n 1 217 PHE n 1 218 GLU n 1 219 ASP n 1 220 VAL n 1 221 ARG n 1 222 ASP n 1 223 ALA n 1 224 ALA n 1 225 TYR n 1 226 GLU n 1 227 ILE n 1 228 ILE n 1 229 LYS n 1 230 LEU n 1 231 LYS n 1 232 GLY n 1 233 ALA n 1 234 THR n 1 235 PHE n 1 236 TYR n 1 237 GLY n 1 238 ILE n 1 239 ALA n 1 240 THR n 1 241 ALA n 1 242 LEU n 1 243 ALA n 1 244 ARG n 1 245 ILE n 1 246 SER n 1 247 LYS n 1 248 ALA n 1 249 ILE n 1 250 LEU n 1 251 ASN n 1 252 ASP n 1 253 GLU n 1 254 ASN n 1 255 ALA n 1 256 VAL n 1 257 LEU n 1 258 PRO n 1 259 LEU n 1 260 SER n 1 261 VAL n 1 262 TYR n 1 263 MET n 1 264 ASP n 1 265 GLY n 1 266 GLN n 1 267 TYR n 1 268 GLY n 1 269 ILE n 1 270 ASN n 1 271 ASP n 1 272 LEU n 1 273 TYR n 1 274 ILE n 1 275 GLY n 1 276 THR n 1 277 PRO n 1 278 ALA n 1 279 VAL n 1 280 ILE n 1 281 ASN n 1 282 ARG n 1 283 ASN n 1 284 GLY n 1 285 ILE n 1 286 GLN n 1 287 ASN n 1 288 ILE n 1 289 LEU n 1 290 GLU n 1 291 ILE n 1 292 PRO n 1 293 LEU n 1 294 THR n 1 295 ASP n 1 296 HIS n 1 297 GLU n 1 298 GLU n 1 299 GLU n 1 300 SER n 1 301 MET n 1 302 GLN n 1 303 LYS n 1 304 SER n 1 305 ALA n 1 306 SER n 1 307 GLN n 1 308 LEU n 1 309 LYS n 1 310 LYS n 1 311 VAL n 1 312 LEU n 1 313 THR n 1 314 ASP n 1 315 ALA n 1 316 PHE n 1 317 ALA n 1 318 LYS n 1 319 ASN n 1 320 ASP n 1 321 ILE n 1 322 GLU n 1 323 THR n 1 324 ARG n 1 325 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Lactobacillus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Lactobacillus casei' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1582 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LDH_LACCA _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P00343 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;ASITDKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVV ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYATWKLSGFPKNRVVGSGTSLDTARFRQS IAEMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEIIKLKGATFYGIAT ALARISKAILNDENAVLPLSVYMDGQYGLNDIYIGTPAVINRNGIQNILEIPLTDHEEESMQKSASQLKKVLTDAFAKND IETRQ ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1LLC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 325 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00343 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 325 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 13 _struct_ref_seq.pdbx_auth_seq_align_end 338 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1LLC PHE A 25 ? UNP P00343 TYR 25 conflict 38 1 1 1LLC LYS A 87 ? UNP P00343 GLN 87 conflict 102 2 1 1LLC GLN A 88 ? UNP P00343 LYS 88 conflict 103 3 1 1LLC LEU A 118 ? UNP P00343 GLY 118 conflict 133 4 1 1LLC ILE A 269 ? UNP P00343 LEU 269 conflict 281 5 1 1LLC LEU A 272 ? UNP P00343 ILE 272 conflict 285 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight AFP 'D-saccharide, alpha linking' n 1,6-di-O-phosphono-alpha-D-fructofuranose 'ALPHA FRUCTOSE 1,6-DIPHOSPHATE; 1,6-di-O-phosphono-alpha-D-fructose; 1,6-di-O-phosphono-D-fructose; 1,6-di-O-phosphono-fructose' 'C6 H14 O12 P2' 340.116 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1LLC _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1LLC _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.0 _refine.ls_d_res_high 3.0 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.3740000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ;THERE ARE THREE ZONES OF LOW (OR NO) DENSITY CONSISTING OF LYS 102 - LEU 110 (ACTIVE SITE LOOP), GLU 211 - VAL 226 (CRYSTAL CONTACTS), AND ILE 334 - GLN 338 (C-TERMINUS). NO COORDINATES ARE PRESENT IN THIS ENTRY FOR THE C-TERMINUS. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2454 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2479 _refine_hist.d_res_high 3.0 _refine_hist.d_res_low 10.0 # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.details _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.vector[2] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[3] 1 given ? 1.00000000 0.00000000 -0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 -0.00000000 0.00000000 1.00000000 0.00000 2 generate ? 0.39602671 0.00000000 -0.91816381 0.00000 0.00000000 -1.00000000 0.00000000 0.00000 -0.91831418 0.00000000 -0.39602671 0.00000 3 generate ? -0.59264499 0.80488991 -0.03115019 43.18003 -0.80541490 -0.59176878 0.03255789 12.07871 0.00773546 0.04449300 0.99897263 121.07681 4 generate ? 0.59264499 0.80488991 0.03115019 43.18003 0.80541490 -0.59176878 -0.03255789 12.07871 -0.00773546 0.04449300 -0.99897263 121.07681 5 generate ? -0.20609758 -0.80488991 0.55648149 43.18003 -0.34886418 0.59176878 0.72660902 12.07871 -0.91430729 -0.04449300 -0.40272226 121.07681 6 generate ? 0.20609758 -0.80488991 -0.55648149 43.18003 0.34886418 0.59176878 -0.72660902 12.07871 0.91430729 -0.04449300 0.40272226 121.07681 # _struct.entry_id 1LLC _struct.title 'STRUCTURE DETERMINATION OF THE ALLOSTERIC L-LACTATE DEHYDROGENASE FROM LACTOBACILLUS CASEI AT 3.0 ANGSTROMS RESOLUTION' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1LLC _struct_keywords.pdbx_keywords 'OXIDOREDUCTASE(CHOH(D)-NAD(A))' _struct_keywords.text 'OXIDOREDUCTASE(CHOH(D)-NAD(A))' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ;IN SOLUTION AS WELL AS IN THE CRYSTAL, THE MOLECULE CONSISTS OF A TETRAMER (FOUR SUBUNITS OF IDENTICAL SEQUENCE). THERE ARE TWO CRYSTALLOGRAPHICALLY INDEPENDENT MOLECULES IN THE CRYSTAL. ONE TETRAMER (CALLED *CENTRAL*) SITS ON A CRYSTALLOGRAPHIC TW0-FOLD AXIS AND A SECOND TETRAMER (CALLED *PERIPHERAL*) SITS IN A GENERAL POSITION. THE ASYMMETRIC UNIT, THEREFORE, CONSISTS OF TWO SUBUNITS FROM THE *CENTRAL* MOLECULE AND ALL FOUR SUBUNITS FROM THE *PERIPHERAL* MOLECULE. THE THREE TRANSFORMATIONS PRESENTED ON *MTRIX* RECORDS BELOW WILL GENERATE A FULL TETRAMERIC MOLECULE WHEN APPLIED TO THE MONOMER PRESENTED IN THIS ENTRY. THE MONOMER PRESENTED IN THIS ENTRY IS THE *RED* SUBUNIT. *MTRIX 1* ROTATES THE *RED* SUBUNIT ABOUT THE P AXIS TO GENERATE THE *BLUE* SUBUNIT. *MTRIX 2* ROTATES THE *RED* SUBUNIT ABOUT THE Q AXIS TO GENERATE THE *YELLOW* SUBUNIT. *MTRIX 3* ROTATES THE *RED* SUBUNIT ABOUT THE *R* AXIS TO GENERATES THE *GREEN* SUBUNIT. THE TETRAMERIC ENZYME CRYSTALLIZES IN SPACE GROUP C 2 WITH SIX TETRAMERS IN THE UNIT CELL. THE OVERALL ARRANGEMENT IS CLOSE TO SPACE GROUP P 31 2 1 (WHICH IS A SUPERGROUP OF C 2), AND ALL TETRAMERS HAVE GOOD LOCAL 222 SYMMETRY. THE *CENTRAL* AND *PERIPHERAL* TETRAMERS ARE RELATED BY AN APPROXIMATE NONCRYSTALLOGRAPHIC 3(1) SCREW AXIS. FRACTIONAL COORDINATES FOR THE ASYMMETRIC UNIT OF THE CRYSTAL CAN BE GENERATED BY APPLYING THE FOLLOWING SIX TRANSFORMATIONS TO THE MONOMER PRESENTED IN THIS ENTRY .003360 .004864 0.000000 0.00000 0.000000 0.000000 .011712 0.00000 .004638 -.003051 0.000000 0.00000 -.003360 .004864 0.000000 0.00000 0.000000 0.000000 -.011712 0.00000 -.004638 -.003051 0.000000 0.00000 -.001966 -.002898 .004763 .27144 -.004865 -.008091 -.006931 .14147 .004657 -.003012 .000247 .67215 .001966 .002898 .004763 .27144 .004865 .008091 -.006931 .14147 -.004657 .003012 .000247 .67215 .001966 -.002898 -.004763 .27144 .004865 -.008091 .006931 .14147 -.004657 -.003012 -.000247 .67215 -.001966 .002898 -.004763 .27144 -.004865 .008091 .006931 .14147 .004657 .003012 -.000247 .67215 ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AB GLY A 17 ? GLN A 30 ? GLY A 30 GLN A 43 1 ? 14 HELX_P HELX_P2 AC LYS A 43 ? ALA A 56 ? LYS A 56 ALA A 69 1 ? 14 HELX_P HELX_P3 AD ASN A 98 ? ILE A 107 ? ASN A 114 ILE A 123 1 ? 10 HELX_P HELX_P4 AE ILE A 107 ? GLY A 115 ? ILE A 123 GLY A 131 1 ? 9 HELX_P HELX_P5 A1F VAL A 127 ? GLY A 139 ? VAL A 142 GLY A 154 1 ? 13 HELX_P HELX_P6 A2F GLY A 149 ? VAL A 165 ? GLY A 164 VAL A 180 1 ? 17 HELX_P HELX_P7 A1G VAL A 214 ? ALA A 223 ? VAL A 226 ALA A 235 1 DISTORTED 10 HELX_P HELX_P8 A2G ALA A 224 ? LEU A 230 ? ALA A 236 LEU A 242 5 DISTORTED 7 HELX_P HELX_P9 A3G PHE A 235 ? ASN A 251 ? PHE A 247 ASN A 263 1 ? 17 HELX_P HELX_P10 AH ASP A 295 ? ALA A 317 B ASP A 309 ALA A 330 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 125 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 140 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 126 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 141 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -6.85 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details SH1 ? 6 ? S2A ? 3 ? S2B ? 3 ? SH3 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense SH1 1 2 ? parallel SH1 2 3 ? parallel SH1 3 4 ? parallel SH1 4 5 ? parallel SH1 5 6 ? parallel S2A 1 2 ? anti-parallel S2A 2 3 ? anti-parallel S2B 1 2 ? anti-parallel S2B 2 3 ? anti-parallel SH3 1 2 ? anti-parallel SH3 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id SH1 1 LYS A 63 ? SER A 67 ? LYS A 76 SER A 80 SH1 2 GLN A 34 ? ASP A 40 ? GLN A 47 ASP A 53 SH1 3 GLN A 9 ? GLY A 15 ? GLN A 22 GLY A 28 SH1 4 ASP A 77 ? GLY A 84 ? ASP A 92 GLY A 99 SH1 5 ILE A 119 ? ALA A 124 ? ILE A 134 ALA A 139 SH1 6 ARG A 144 ? GLY A 147 ? ARG A 159 GLY A 162 S2A 1 VAL A 172 ? TYR A 175 ? VAL A 187 TYR A 190 S2A 2 VAL A 187 ? VAL A 187 ? VAL A 202 VAL A 202 S2A 3 ILE A 198 A ILE A 198 A ILE A 210 ILE A 210 S2B 1 VAL A 172 ? TYR A 175 ? VAL A 187 TYR A 190 S2B 2 ALA A 191 ? ASN A 192 ? ALA A 206 ASN A 207 S2B 3 ILE A 198 A ILE A 198 A ILE A 210 ILE A 210 SH3 1 ALA A 255 ? MET A 263 ? ALA A 267 MET A 275 SH3 2 LEU A 272 ? ILE A 280 ? LEU A 285 ILE A 293 SH3 3 GLY A 284 ? LEU A 289 ? GLY A 297 LEU A 303 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id SH1 1 2 O LYS A 64 ? O LYS A 77 N ILE A 36 ? N ILE A 49 SH1 2 3 O GLU A 35 ? O GLU A 48 N VAL A 11 ? N VAL A 24 SH1 3 4 N ILE A 12 ? N ILE A 25 O LEU A 78 ? O LEU A 93 SH1 4 5 N VAL A 79 ? N VAL A 94 O ILE A 119 ? O ILE A 134 SH1 5 6 N PHE A 120 ? N PHE A 135 O ARG A 144 ? O ARG A 159 S2A 1 2 O TYR A 175 ? O TYR A 190 N VAL A 187 ? N VAL A 202 S2B 1 2 O HIS A 173 ? O HIS A 188 N ASN A 192 ? N ASN A 207 S2B 2 3 O ALA A 191 ? O ALA A 206 N ILE A 198 A N ILE A 210 SH3 1 2 N LEU A 257 ? N LEU A 269 O ALA A 278 ? O ALA A 291 SH3 2 3 N VAL A 279 ? N VAL A 292 O ASN A 287 ? O ASN A 301 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AFP Author ? ? ? ? 7 'RESIDUES CLOSE TO THE MOLECULAR P AXIS THAT BIND THE ALLOSTERIC ACTIVATOR' SO4 Author ? ? ? ? 3 'RESIDUES BINDING THE SULFATE' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AFP 7 THR A 154 ? THR A 169 . ? 1_555 ? 2 AFP 7 ARG A 158 ? ARG A 173 . ? 1_555 ? 3 AFP 7 HIS A 173 ? HIS A 188 . ? 1_555 ? 4 AFP 7 TYR A 175 ? TYR A 190 . ? 1_555 ? 5 AFP 7 ARG A 244 ? ARG A 256 . ? 1_555 ? 6 AFP 7 VAL A 256 ? VAL A 268 . ? 1_555 ? 7 AFP 7 LEU A 257 ? LEU A 269 . ? 1_555 ? 8 SO4 3 ARG A 156 ? ARG A 171 . ? 1_555 ? 9 SO4 3 HIS A 180 ? HIS A 195 . ? 1_555 ? 10 SO4 3 THR A 234 ? THR A 246 . ? 1_555 ? # _database_PDB_matrix.entry_id 1LLC _database_PDB_matrix.origx[1][1] 0.549566 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.835454 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx[2][1] 0.835454 _database_PDB_matrix.origx[2][2] 0.000000 _database_PDB_matrix.origx[2][3] -0.549476 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 1.000000 _database_PDB_matrix.origx[3][3] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 1LLC _atom_sites.fract_transf_matrix[1][1] 0.005910 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000134 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011712 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005551 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_sites_footnote.id _atom_sites_footnote.text 1 'RESIDUE 141 IS A CIS PROLINE.' 2 'SEE REMARK 8.' # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 13 13 ALA ALA A . n A 1 2 SER 2 14 14 SER SER A . n A 1 3 ILE 3 15 15 ILE ILE A . n A 1 4 THR 4 16 16 THR THR A . n A 1 5 ASP 5 17 17 ASP ASP A . n A 1 6 LYS 6 18 18 LYS LYS A . n A 1 7 ASP 7 19 19 ASP ASP A . n A 1 8 HIS 8 20 20 HIS HIS A . n A 1 9 GLN 9 22 22 GLN GLN A . n A 1 10 LYS 10 23 23 LYS LYS A . n A 1 11 VAL 11 24 24 VAL VAL A . n A 1 12 ILE 12 25 25 ILE ILE A . n A 1 13 LEU 13 26 26 LEU LEU A . n A 1 14 VAL 14 27 27 VAL VAL A . n A 1 15 GLY 15 28 28 GLY GLY A . n A 1 16 ASP 16 29 29 ASP ASP A . n A 1 17 GLY 17 30 30 GLY GLY A . n A 1 18 ALA 18 31 31 ALA ALA A . n A 1 19 VAL 19 32 32 VAL VAL A . n A 1 20 GLY 20 33 33 GLY GLY A . n A 1 21 SER 21 34 34 SER SER A . n A 1 22 SER 22 35 35 SER SER A . n A 1 23 TYR 23 36 36 TYR TYR A . n A 1 24 ALA 24 37 37 ALA ALA A . n A 1 25 PHE 25 38 38 PHE PHE A . n A 1 26 ALA 26 39 39 ALA ALA A . n A 1 27 MET 27 40 40 MET MET A . n A 1 28 VAL 28 41 41 VAL VAL A . n A 1 29 LEU 29 42 42 LEU LEU A . n A 1 30 GLN 30 43 43 GLN GLN A . n A 1 31 GLY 31 44 44 GLY GLY A . n A 1 32 ILE 32 45 45 ILE ILE A . n A 1 33 ALA 33 46 46 ALA ALA A . n A 1 34 GLN 34 47 47 GLN GLN A . n A 1 35 GLU 35 48 48 GLU GLU A . n A 1 36 ILE 36 49 49 ILE ILE A . n A 1 37 GLY 37 50 50 GLY GLY A . n A 1 38 ILE 38 51 51 ILE ILE A . n A 1 39 VAL 39 52 52 VAL VAL A . n A 1 40 ASP 40 53 53 ASP ASP A . n A 1 41 ILE 41 54 54 ILE ILE A . n A 1 42 PHE 42 55 55 PHE PHE A . n A 1 43 LYS 43 56 56 LYS LYS A . n A 1 44 ASP 44 57 57 ASP ASP A . n A 1 45 LYS 45 58 58 LYS LYS A . n A 1 46 THR 46 59 59 THR THR A . n A 1 47 LYS 47 60 60 LYS LYS A . n A 1 48 GLY 48 61 61 GLY GLY A . n A 1 49 ASP 49 62 62 ASP ASP A . n A 1 50 ALA 50 63 63 ALA ALA A . n A 1 51 ILE 51 64 64 ILE ILE A . n A 1 52 ASP 52 65 65 ASP ASP A . n A 1 53 LEU 53 66 66 LEU LEU A . n A 1 54 SER 54 67 67 SER SER A . n A 1 55 ASN 55 68 68 ASN ASN A . n A 1 56 ALA 56 69 69 ALA ALA A . n A 1 57 LEU 57 70 70 LEU LEU A . n A 1 58 PRO 58 71 71 PRO PRO A . n A 1 59 PHE 59 72 72 PHE PHE A . n A 1 60 THR 60 73 73 THR THR A . n A 1 61 SER 61 74 74 SER SER A . n A 1 62 PRO 62 75 75 PRO PRO A . n A 1 63 LYS 63 76 76 LYS LYS A . n A 1 64 LYS 64 77 77 LYS LYS A . n A 1 65 ILE 65 78 78 ILE ILE A . n A 1 66 TYR 66 79 79 TYR TYR A . n A 1 67 SER 67 80 80 SER SER A . n A 1 68 ALA 68 81 81 ALA ALA A . n A 1 69 GLU 69 84 84 GLU GLU A . n A 1 70 TYR 70 85 85 TYR TYR A . n A 1 71 SER 71 86 86 SER SER A . n A 1 72 ASP 72 87 87 ASP ASP A . n A 1 73 ALA 73 88 88 ALA ALA A . n A 1 74 LYS 74 89 89 LYS LYS A . n A 1 75 ASP 75 90 90 ASP ASP A . n A 1 76 ALA 76 91 91 ALA ALA A . n A 1 77 ASP 77 92 92 ASP ASP A . n A 1 78 LEU 78 93 93 LEU LEU A . n A 1 79 VAL 79 94 94 VAL VAL A . n A 1 80 VAL 80 95 95 VAL VAL A . n A 1 81 ILE 81 96 96 ILE ILE A . n A 1 82 THR 82 97 97 THR THR A . n A 1 83 ALA 83 98 98 ALA ALA A . n A 1 84 GLY 84 99 99 GLY GLY A . n A 1 85 ALA 85 100 100 ALA ALA A . n A 1 86 PRO 86 101 101 PRO PRO A . n A 1 87 LYS 87 102 102 LYS LYS A . n A 1 88 GLN 88 103 103 GLN GLN A . n A 1 89 PRO 89 105 105 PRO PRO A . n A 1 90 GLY 90 106 106 GLY GLY A . n A 1 91 GLU 91 107 107 GLU GLU A . n A 1 92 THR 92 108 108 THR THR A . n A 1 93 ARG 93 109 109 ARG ARG A . n A 1 94 LEU 94 110 110 LEU LEU A . n A 1 95 ASP 95 111 111 ASP ASP A . n A 1 96 LEU 96 112 112 LEU LEU A . n A 1 97 VAL 97 113 113 VAL VAL A . n A 1 98 ASN 98 114 114 ASN ASN A . n A 1 99 LYS 99 115 115 LYS LYS A . n A 1 100 ASN 100 116 116 ASN ASN A . n A 1 101 LEU 101 117 117 LEU LEU A . n A 1 102 LYS 102 118 118 LYS LYS A . n A 1 103 ILE 103 119 119 ILE ILE A . n A 1 104 LEU 104 120 120 LEU LEU A . n A 1 105 LYS 105 121 121 LYS LYS A . n A 1 106 SER 106 122 122 SER SER A . n A 1 107 ILE 107 123 123 ILE ILE A . n A 1 108 VAL 108 124 124 VAL VAL A . n A 1 109 ASP 109 125 125 ASP ASP A . n A 1 110 PRO 110 126 126 PRO PRO A . n A 1 111 ILE 111 127 127 ILE ILE A . n A 1 112 VAL 112 128 128 VAL VAL A . n A 1 113 ASP 113 129 129 ASP ASP A . n A 1 114 SER 114 130 130 SER SER A . n A 1 115 GLY 115 131 131 GLY GLY A . n A 1 116 PHE 116 132 132 PHE PHE A A n A 1 117 ASN 117 132 132 ASN ASN A B n A 1 118 LEU 118 133 133 LEU LEU A . n A 1 119 ILE 119 134 134 ILE ILE A . n A 1 120 PHE 120 135 135 PHE PHE A . n A 1 121 LEU 121 136 136 LEU LEU A . n A 1 122 VAL 122 137 137 VAL VAL A . n A 1 123 ALA 123 138 138 ALA ALA A . n A 1 124 ALA 124 139 139 ALA ALA A . n A 1 125 ASN 125 140 140 ASN ASN A . n A 1 126 PRO 126 141 141 PRO PRO A . n A 1 127 VAL 127 142 142 VAL VAL A . n A 1 128 ASP 128 143 143 ASP ASP A . n A 1 129 ILE 129 144 144 ILE ILE A . n A 1 130 LEU 130 145 145 LEU LEU A . n A 1 131 THR 131 146 146 THR THR A . n A 1 132 TYR 132 147 147 TYR TYR A . n A 1 133 ALA 133 148 148 ALA ALA A . n A 1 134 THR 134 149 149 THR THR A . n A 1 135 TRP 135 150 150 TRP TRP A . n A 1 136 LYS 136 151 151 LYS LYS A . n A 1 137 LEU 137 152 152 LEU LEU A . n A 1 138 SER 138 153 153 SER SER A . n A 1 139 GLY 139 154 154 GLY GLY A . n A 1 140 PHE 140 155 155 PHE PHE A . n A 1 141 PRO 141 156 156 PRO PRO A . n A 1 142 LYS 142 157 157 LYS LYS A . n A 1 143 ASN 143 158 158 ASN ASN A . n A 1 144 ARG 144 159 159 ARG ARG A . n A 1 145 VAL 145 160 160 VAL VAL A . n A 1 146 VAL 146 161 161 VAL VAL A . n A 1 147 GLY 147 162 162 GLY GLY A . n A 1 148 SER 148 163 163 SER SER A . n A 1 149 GLY 149 164 164 GLY GLY A . n A 1 150 THR 150 165 165 THR THR A . n A 1 151 SER 151 166 166 SER SER A . n A 1 152 LEU 152 167 167 LEU LEU A . n A 1 153 ASP 153 168 168 ASP ASP A . n A 1 154 THR 154 169 169 THR THR A . n A 1 155 ALA 155 170 170 ALA ALA A . n A 1 156 ARG 156 171 171 ARG ARG A . n A 1 157 PHE 157 172 172 PHE PHE A . n A 1 158 ARG 158 173 173 ARG ARG A . n A 1 159 GLN 159 174 174 GLN GLN A . n A 1 160 SER 160 175 175 SER SER A . n A 1 161 ILE 161 176 176 ILE ILE A . n A 1 162 ALA 162 177 177 ALA ALA A . n A 1 163 GLU 163 178 178 GLU GLU A . n A 1 164 MET 164 179 179 MET MET A . n A 1 165 VAL 165 180 180 VAL VAL A . n A 1 166 ASN 166 181 181 ASN ASN A . n A 1 167 VAL 167 182 182 VAL VAL A . n A 1 168 ASP 168 183 183 ASP ASP A . n A 1 169 ALA 169 184 184 ALA ALA A . n A 1 170 ARG 170 185 185 ARG ARG A . n A 1 171 SER 171 186 186 SER SER A . n A 1 172 VAL 172 187 187 VAL VAL A . n A 1 173 HIS 173 188 188 HIS HIS A . n A 1 174 ALA 174 189 189 ALA ALA A . n A 1 175 TYR 175 190 190 TYR TYR A . n A 1 176 ILE 176 191 191 ILE ILE A . n A 1 177 MET 177 192 192 MET MET A . n A 1 178 GLY 178 193 193 GLY GLY A . n A 1 179 GLU 179 194 194 GLU GLU A . n A 1 180 HIS 180 195 195 HIS HIS A . n A 1 181 GLY 181 196 196 GLY GLY A . n A 1 182 ASP 182 197 197 ASP ASP A . n A 1 183 THR 183 198 198 THR THR A . n A 1 184 GLU 184 199 199 GLU GLU A . n A 1 185 PHE 185 200 200 PHE PHE A . n A 1 186 PRO 186 201 201 PRO PRO A . n A 1 187 VAL 187 202 202 VAL VAL A . n A 1 188 TRP 188 203 203 TRP TRP A . n A 1 189 SER 189 204 204 SER SER A . n A 1 190 HIS 190 205 205 HIS HIS A . n A 1 191 ALA 191 206 206 ALA ALA A . n A 1 192 ASN 192 207 207 ASN ASN A . n A 1 193 ILE 193 208 208 ILE ILE A . n A 1 194 GLY 194 209 209 GLY GLY A A n A 1 195 GLY 195 209 209 GLY GLY A B n A 1 196 VAL 196 209 209 VAL VAL A C n A 1 197 THR 197 209 209 THR THR A D n A 1 198 ILE 198 210 210 ILE ILE A A n A 1 199 ALA 199 210 210 ALA ALA A B n A 1 200 GLU 200 211 211 GLU GLU A . n A 1 201 TRP 201 212 212 TRP TRP A . n A 1 202 VAL 202 213 213 VAL VAL A . n A 1 203 LYS 203 214 214 LYS LYS A . n A 1 204 ALA 204 215 215 ALA ALA A . n A 1 205 HIS 205 216 216 HIS HIS A . n A 1 206 PRO 206 217 217 PRO PRO A . n A 1 207 GLU 207 218 218 GLU GLU A . n A 1 208 ILE 208 219 219 ILE ILE A . n A 1 209 LYS 209 220 220 LYS LYS A . n A 1 210 GLU 210 221 221 GLU GLU A . n A 1 211 ASP 211 222 222 ASP ASP A . n A 1 212 LYS 212 223 223 LYS LYS A . n A 1 213 LEU 213 225 225 LEU LEU A . n A 1 214 VAL 214 226 226 VAL VAL A . n A 1 215 LYS 215 227 227 LYS LYS A . n A 1 216 MET 216 228 228 MET MET A . n A 1 217 PHE 217 229 229 PHE PHE A . n A 1 218 GLU 218 230 230 GLU GLU A . n A 1 219 ASP 219 231 231 ASP ASP A . n A 1 220 VAL 220 232 232 VAL VAL A . n A 1 221 ARG 221 233 233 ARG ARG A . n A 1 222 ASP 222 234 234 ASP ASP A . n A 1 223 ALA 223 235 235 ALA ALA A . n A 1 224 ALA 224 236 236 ALA ALA A . n A 1 225 TYR 225 237 237 TYR TYR A . n A 1 226 GLU 226 238 238 GLU GLU A . n A 1 227 ILE 227 239 239 ILE ILE A . n A 1 228 ILE 228 240 240 ILE ILE A . n A 1 229 LYS 229 241 241 LYS LYS A . n A 1 230 LEU 230 242 242 LEU LEU A . n A 1 231 LYS 231 243 243 LYS LYS A . n A 1 232 GLY 232 244 244 GLY GLY A . n A 1 233 ALA 233 245 245 ALA ALA A . n A 1 234 THR 234 246 246 THR THR A . n A 1 235 PHE 235 247 247 PHE PHE A . n A 1 236 TYR 236 248 248 TYR TYR A . n A 1 237 GLY 237 249 249 GLY GLY A . n A 1 238 ILE 238 250 250 ILE ILE A . n A 1 239 ALA 239 251 251 ALA ALA A . n A 1 240 THR 240 252 252 THR THR A . n A 1 241 ALA 241 253 253 ALA ALA A . n A 1 242 LEU 242 254 254 LEU LEU A . n A 1 243 ALA 243 255 255 ALA ALA A . n A 1 244 ARG 244 256 256 ARG ARG A . n A 1 245 ILE 245 257 257 ILE ILE A . n A 1 246 SER 246 258 258 SER SER A . n A 1 247 LYS 247 259 259 LYS LYS A . n A 1 248 ALA 248 260 260 ALA ALA A . n A 1 249 ILE 249 261 261 ILE ILE A . n A 1 250 LEU 250 262 262 LEU LEU A . n A 1 251 ASN 251 263 263 ASN ASN A . n A 1 252 ASP 252 264 264 ASP ASP A . n A 1 253 GLU 253 265 265 GLU GLU A . n A 1 254 ASN 254 266 266 ASN ASN A . n A 1 255 ALA 255 267 267 ALA ALA A . n A 1 256 VAL 256 268 268 VAL VAL A . n A 1 257 LEU 257 269 269 LEU LEU A . n A 1 258 PRO 258 270 270 PRO PRO A . n A 1 259 LEU 259 271 271 LEU LEU A . n A 1 260 SER 260 272 272 SER SER A . n A 1 261 VAL 261 273 273 VAL VAL A . n A 1 262 TYR 262 274 274 TYR TYR A . n A 1 263 MET 263 275 275 MET MET A . n A 1 264 ASP 264 276 276 ASP ASP A . n A 1 265 GLY 265 277 277 GLY GLY A . n A 1 266 GLN 266 278 278 GLN GLN A . n A 1 267 TYR 267 279 279 TYR TYR A . n A 1 268 GLY 268 280 280 GLY GLY A . n A 1 269 ILE 269 281 281 ILE ILE A . n A 1 270 ASN 270 282 282 ASN ASN A . n A 1 271 ASP 271 283 283 ASP ASP A . n A 1 272 LEU 272 285 285 LEU LEU A . n A 1 273 TYR 273 286 286 TYR TYR A . n A 1 274 ILE 274 287 287 ILE ILE A . n A 1 275 GLY 275 288 288 GLY GLY A . n A 1 276 THR 276 289 289 THR THR A . n A 1 277 PRO 277 290 290 PRO PRO A . n A 1 278 ALA 278 291 291 ALA ALA A . n A 1 279 VAL 279 292 292 VAL VAL A . n A 1 280 ILE 280 293 293 ILE ILE A . n A 1 281 ASN 281 294 294 ASN ASN A . n A 1 282 ARG 282 295 295 ARG ARG A . n A 1 283 ASN 283 296 296 ASN ASN A . n A 1 284 GLY 284 297 297 GLY GLY A . n A 1 285 ILE 285 298 298 ILE ILE A . n A 1 286 GLN 286 299 299 GLN GLN A . n A 1 287 ASN 287 301 301 ASN ASN A . n A 1 288 ILE 288 302 302 ILE ILE A . n A 1 289 LEU 289 303 303 LEU LEU A . n A 1 290 GLU 290 304 304 GLU GLU A . n A 1 291 ILE 291 305 305 ILE ILE A . n A 1 292 PRO 292 306 306 PRO PRO A . n A 1 293 LEU 293 307 307 LEU LEU A . n A 1 294 THR 294 308 308 THR THR A . n A 1 295 ASP 295 309 309 ASP ASP A . n A 1 296 HIS 296 310 310 HIS HIS A . n A 1 297 GLU 297 311 311 GLU GLU A . n A 1 298 GLU 298 312 312 GLU GLU A . n A 1 299 GLU 299 313 313 GLU GLU A . n A 1 300 SER 300 314 314 SER SER A . n A 1 301 MET 301 315 315 MET MET A . n A 1 302 GLN 302 316 316 GLN GLN A . n A 1 303 LYS 303 317 317 LYS LYS A . n A 1 304 SER 304 318 318 SER SER A . n A 1 305 ALA 305 319 319 ALA ALA A . n A 1 306 SER 306 320 320 SER SER A . n A 1 307 GLN 307 321 321 GLN GLN A . n A 1 308 LEU 308 322 322 LEU LEU A . n A 1 309 LYS 309 323 323 LYS LYS A . n A 1 310 LYS 310 324 324 LYS LYS A . n A 1 311 VAL 311 325 325 VAL VAL A . n A 1 312 LEU 312 326 326 LEU LEU A . n A 1 313 THR 313 327 327 THR THR A . n A 1 314 ASP 314 328 328 ASP ASP A . n A 1 315 ALA 315 329 329 ALA ALA A . n A 1 316 PHE 316 330 330 PHE PHE A A n A 1 317 ALA 317 330 330 ALA ALA A B n A 1 318 LYS 318 331 331 LYS LYS A . n A 1 319 ASN 319 332 332 ASN ASN A . n A 1 320 ASP 320 333 333 ASP ASP A . n A 1 321 ILE 321 334 334 ILE ILE A . n A 1 322 GLU 322 335 ? ? ? A . n A 1 323 THR 323 336 ? ? ? A . n A 1 324 ARG 324 337 ? ? ? A . n A 1 325 GLN 325 338 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AFP 1 1 1 AFP FBP A . C 3 SO4 1 2 2 SO4 SO4 A . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'complete point assembly' ? tetrameric 4 2 'complete point assembly' ? tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2,3,4 A,B,C 2 5,6,7,8 A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'point symmetry operation' ? ? -0.39602671 0.00000000 0.91816381 0.00000 0.00000000 -1.00000000 0.00000000 0.00000 0.91831418 0.00000000 0.39602671 0.00000 4 'point symmetry operation' ? ? 0.39602671 0.00000000 -0.91816381 0.00000 0.00000000 -1.00000000 0.00000000 0.00000 -0.91831418 0.00000000 -0.39602671 0.00000 5 'point symmetry operation' ? ? -0.59264499 0.80488991 -0.03115019 43.18003 -0.80541490 -0.59176878 0.03255789 12.07871 0.00773546 0.04449300 0.99897263 121.07681 6 'point symmetry operation' ? ? 0.59264499 0.80488991 0.03115019 43.18003 0.80541490 -0.59176878 -0.03255789 12.07871 -0.00773546 0.04449300 -0.99897263 121.07681 7 'point symmetry operation' ? ? -0.20609758 -0.80488991 0.55648149 43.18003 -0.34886418 0.59176878 0.72660902 12.07871 -0.91430729 -0.04449300 -0.40272226 121.07681 8 'point symmetry operation' ? ? 0.20609758 -0.80488991 -0.55648149 43.18003 0.34886418 0.59176878 -0.72660902 12.07871 0.91430729 -0.04449300 0.40272226 121.07681 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1989-07-12 2 'Structure model' 1 1 2008-03-03 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2020-07-29 5 'Structure model' 2 0 2023-07-26 6 'Structure model' 2 1 2023-08-02 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? 3 5 'Structure model' repository Remediation ? 'Coordinates and associated ncs operations (if present) transformed into standard crystal frame' # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' Other 8 4 'Structure model' 'Structure summary' 9 5 'Structure model' 'Atomic model' 10 5 'Structure model' 'Data collection' 11 5 'Structure model' 'Database references' 12 5 'Structure model' 'Derived calculations' 13 5 'Structure model' Other 14 5 'Structure model' 'Refinement description' 15 5 'Structure model' 'Structure summary' 16 6 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp 2 4 'Structure model' entity 3 4 'Structure model' pdbx_chem_comp_identifier 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_entity_nonpoly 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site 8 4 'Structure model' struct_site_gen 9 5 'Structure model' atom_site 10 5 'Structure model' atom_sites 11 5 'Structure model' cell 12 5 'Structure model' chem_comp 13 5 'Structure model' database_2 14 5 'Structure model' database_PDB_matrix 15 5 'Structure model' pdbx_struct_assembly 16 5 'Structure model' pdbx_struct_assembly_gen 17 5 'Structure model' pdbx_struct_assembly_prop 18 5 'Structure model' pdbx_struct_oper_list 19 5 'Structure model' pdbx_validate_main_chain_plane 20 5 'Structure model' pdbx_validate_peptide_omega 21 5 'Structure model' pdbx_validate_planes 22 5 'Structure model' pdbx_validate_rmsd_angle 23 5 'Structure model' pdbx_validate_rmsd_bond 24 5 'Structure model' pdbx_validate_torsion 25 5 'Structure model' struct_ncs_oper 26 6 'Structure model' pdbx_struct_assembly_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_chem_comp.mon_nstd_flag' 2 4 'Structure model' '_chem_comp.name' 3 4 'Structure model' '_chem_comp.type' 4 4 'Structure model' '_entity.pdbx_description' 5 4 'Structure model' '_pdbx_database_status.process_site' 6 4 'Structure model' '_pdbx_entity_nonpoly.name' 7 4 'Structure model' '_struct_ref_seq_dif.details' 8 5 'Structure model' '_atom_site.Cartn_x' 9 5 'Structure model' '_atom_site.Cartn_y' 10 5 'Structure model' '_atom_site.Cartn_z' 11 5 'Structure model' '_atom_sites.fract_transf_matrix[1][1]' 12 5 'Structure model' '_atom_sites.fract_transf_matrix[1][2]' 13 5 'Structure model' '_atom_sites.fract_transf_matrix[1][3]' 14 5 'Structure model' '_atom_sites.fract_transf_matrix[2][2]' 15 5 'Structure model' '_atom_sites.fract_transf_matrix[2][3]' 16 5 'Structure model' '_atom_sites.fract_transf_matrix[3][1]' 17 5 'Structure model' '_atom_sites.fract_transf_matrix[3][2]' 18 5 'Structure model' '_atom_sites.fract_transf_matrix[3][3]' 19 5 'Structure model' '_cell.Z_PDB' 20 5 'Structure model' '_chem_comp.pdbx_synonyms' 21 5 'Structure model' '_database_2.pdbx_DOI' 22 5 'Structure model' '_database_2.pdbx_database_accession' 23 5 'Structure model' '_database_PDB_matrix.origx[1][1]' 24 5 'Structure model' '_database_PDB_matrix.origx[1][3]' 25 5 'Structure model' '_database_PDB_matrix.origx[2][1]' 26 5 'Structure model' '_database_PDB_matrix.origx[2][2]' 27 5 'Structure model' '_database_PDB_matrix.origx[2][3]' 28 5 'Structure model' '_database_PDB_matrix.origx[3][2]' 29 5 'Structure model' '_database_PDB_matrix.origx[3][3]' 30 5 'Structure model' '_pdbx_struct_assembly.details' 31 5 'Structure model' '_pdbx_struct_assembly.method_details' 32 5 'Structure model' '_pdbx_struct_assembly.oligomeric_count' 33 5 'Structure model' '_pdbx_struct_assembly.oligomeric_details' 34 5 'Structure model' '_pdbx_struct_assembly_gen.assembly_id' 35 5 'Structure model' '_pdbx_struct_assembly_gen.oper_expression' 36 5 'Structure model' '_pdbx_validate_main_chain_plane.improper_torsion_angle' 37 5 'Structure model' '_pdbx_validate_planes.rmsd' 38 5 'Structure model' '_pdbx_validate_rmsd_angle.angle_deviation' 39 5 'Structure model' '_pdbx_validate_rmsd_angle.angle_value' 40 5 'Structure model' '_pdbx_validate_rmsd_bond.bond_deviation' 41 5 'Structure model' '_pdbx_validate_rmsd_bond.bond_value' 42 5 'Structure model' '_pdbx_validate_torsion.phi' 43 5 'Structure model' '_pdbx_validate_torsion.psi' 44 6 'Structure model' '_pdbx_struct_assembly_gen.assembly_id' # _software.name EREF _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _pdbx_database_remark.id 700 _pdbx_database_remark.text ;SHEET SHEET S2 CONTAINS A BIFURCATED STRAND. THIS IS REPRESENTED ON THE *SHEET* RECORDS BELOW BY PRESENTING TWO SHEETS (S2A AND S2B) THAT DIFFER ONLY IN ONE STRAND. ; # _pdbx_entry_details.entry_id 1LLC _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;THE METAL ION BINDING SITE HAS NOT YET BEEN IDENTIFIED AND, THEREFORE, NO COORDINATES FOR CO2+ ARE INCLUDED IN THIS ENTRY. ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NE A ARG 173 ? ? O3 A AFP 1 ? ? 0.97 2 1 NH1 A ARG 173 ? ? O4 A AFP 1 ? ? 1.36 3 1 CZ A ARG 173 ? ? C4 A AFP 1 ? ? 1.73 4 1 NH1 A ARG 173 ? ? C4 A AFP 1 ? ? 1.77 5 1 NE A ARG 173 ? ? C3 A AFP 1 ? ? 1.90 6 1 CZ A ARG 173 ? ? O3 A AFP 1 ? ? 1.94 7 1 CD A ARG 173 ? ? O3 A AFP 1 ? ? 1.96 8 1 O A VAL 268 ? ? O5P A AFP 1 ? ? 1.98 9 1 CD2 A HIS 188 ? ? O2P A AFP 1 ? ? 2.12 10 1 CZ A ARG 173 ? ? O4 A AFP 1 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 CG A LYS 18 ? ? 1_555 OD1 A ASP 264 ? ? 2_555 0.69 2 1 CG A LYS 18 ? ? 1_555 CG A ASP 264 ? ? 2_555 0.93 3 1 CD A LYS 18 ? ? 1_555 CG A ASP 264 ? ? 2_555 1.38 4 1 CG A LYS 18 ? ? 1_555 OD2 A ASP 264 ? ? 2_555 1.52 5 1 CD A LYS 18 ? ? 1_555 OD2 A ASP 264 ? ? 2_555 1.59 6 1 CE A LYS 18 ? ? 1_555 CA A ASP 264 ? ? 2_555 1.69 7 1 CB A LYS 18 ? ? 1_555 OD2 A ASP 264 ? ? 2_555 1.90 8 1 CB A LYS 18 ? ? 1_555 OD1 A ASP 264 ? ? 2_555 1.98 9 1 CD A LYS 18 ? ? 1_555 OD1 A ASP 264 ? ? 2_555 1.99 10 1 CE A LYS 18 ? ? 1_555 CG A ASP 264 ? ? 2_555 2.08 11 1 CE A LYS 18 ? ? 1_555 CB A ASP 264 ? ? 2_555 2.10 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 NE1 A TRP 150 ? ? CE2 A TRP 150 ? ? 1.251 1.371 -0.120 0.013 N 2 1 NE1 A TRP 203 ? ? CE2 A TRP 203 ? ? 1.270 1.371 -0.101 0.013 N 3 1 NE1 A TRP 212 ? ? CE2 A TRP 212 ? ? 1.275 1.371 -0.096 0.013 N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 GLN _pdbx_validate_rmsd_angle.auth_seq_id_1 103 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 105 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 105 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 128.73 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation 9.43 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 14 ? ? -94.56 -135.86 2 1 ASP A 17 ? ? 176.05 61.39 3 1 LYS A 18 ? ? -50.06 101.92 4 1 ASP A 19 ? ? -126.17 -86.27 5 1 ASP A 29 ? ? -81.10 46.60 6 1 ALA A 31 ? ? -53.36 -76.13 7 1 GLU A 48 ? ? 167.10 121.56 8 1 ASP A 53 ? ? 164.07 134.73 9 1 ILE A 54 ? ? -30.56 -12.67 10 1 PHE A 55 ? ? -78.93 -161.73 11 1 LYS A 56 ? ? -158.49 -26.75 12 1 ILE A 64 ? ? -69.40 2.80 13 1 ALA A 69 ? ? -84.78 43.47 14 1 LYS A 76 ? ? -156.85 -152.91 15 1 TYR A 79 ? ? -127.28 -133.26 16 1 ALA A 81 ? ? -106.18 -73.76 17 1 GLU A 84 ? ? 49.38 -157.35 18 1 ASP A 87 ? ? -66.39 86.95 19 1 ALA A 88 ? ? -169.06 -34.64 20 1 ASP A 90 ? ? 63.39 -3.20 21 1 PRO A 101 ? ? -63.51 -177.17 22 1 GLU A 107 ? ? 91.91 97.96 23 1 THR A 108 ? ? -51.79 96.60 24 1 ARG A 109 ? ? -82.09 -149.16 25 1 LEU A 110 ? ? -117.06 -78.36 26 1 ASN A 132 B ? -164.37 36.82 27 1 LEU A 133 ? ? -135.47 -156.99 28 1 PHE A 155 ? ? -38.30 126.94 29 1 LYS A 157 ? ? -58.61 -2.27 30 1 ARG A 159 ? ? 165.70 -24.14 31 1 SER A 163 ? ? -172.36 -86.92 32 1 THR A 165 ? ? -9.99 -49.50 33 1 SER A 166 ? ? -29.88 -54.03 34 1 GLN A 174 ? ? -92.35 34.93 35 1 ALA A 177 ? ? -54.47 -113.13 36 1 GLU A 178 ? ? -26.82 -30.20 37 1 VAL A 180 ? ? -103.55 -157.89 38 1 ASP A 183 ? ? -39.65 152.38 39 1 ARG A 185 ? ? 65.79 -9.57 40 1 SER A 186 ? ? -96.34 -92.41 41 1 VAL A 187 ? ? -4.34 106.39 42 1 ALA A 189 ? ? 163.41 148.05 43 1 GLU A 194 ? ? -109.59 -115.83 44 1 ASP A 197 ? ? 48.49 6.74 45 1 THR A 198 ? ? -137.69 -34.42 46 1 ALA A 206 ? ? -4.03 106.55 47 1 VAL A 209 C ? -69.15 -166.04 48 1 THR A 209 D ? -170.72 138.34 49 1 ALA A 210 B ? 75.45 35.08 50 1 ALA A 215 ? ? 63.88 99.68 51 1 HIS A 216 ? ? 46.80 -118.95 52 1 ILE A 219 ? ? 127.81 -25.91 53 1 LYS A 220 ? ? -106.51 61.62 54 1 GLU A 221 ? ? -165.16 -30.20 55 1 ASP A 222 ? ? 113.76 -39.85 56 1 LYS A 223 ? ? -74.14 -80.32 57 1 LEU A 225 ? ? -63.68 -165.14 58 1 VAL A 226 ? ? 68.76 -47.81 59 1 LYS A 227 ? ? -37.24 -39.14 60 1 ILE A 240 ? ? -88.84 31.85 61 1 LYS A 241 ? ? -116.30 -79.59 62 1 LYS A 243 ? ? 112.80 -84.94 63 1 ALA A 245 ? ? -68.56 75.28 64 1 LEU A 262 ? ? 100.99 -48.05 65 1 ASP A 264 ? ? 72.47 46.26 66 1 ASN A 266 ? ? 34.32 53.48 67 1 LEU A 271 ? ? -172.07 116.34 68 1 SER A 272 ? ? -29.00 99.02 69 1 VAL A 273 ? ? -94.64 -64.67 70 1 TYR A 274 ? ? 151.72 -1.81 71 1 MET A 275 ? ? 45.16 92.72 72 1 TYR A 279 ? ? 154.77 -125.10 73 1 ASN A 282 ? ? -23.16 136.40 74 1 ASP A 283 ? ? 97.00 10.96 75 1 PRO A 290 ? ? -53.97 100.20 76 1 ASN A 301 ? ? 89.47 123.32 77 1 PRO A 306 ? ? -64.13 99.81 78 1 THR A 308 ? ? 114.06 -80.20 79 1 ASP A 309 ? ? -163.53 -29.30 80 1 ALA A 319 ? ? -57.76 0.14 81 1 LYS A 323 ? ? 101.98 -4.10 82 1 LYS A 331 ? ? -35.19 120.45 83 1 ASN A 332 ? ? 153.17 63.38 84 1 ASP A 333 ? ? 25.74 -118.37 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 ILE A 15 ? ? THR A 16 ? ? -136.78 2 1 THR A 16 ? ? ASP A 17 ? ? 147.04 3 1 SER A 80 ? ? ALA A 81 ? ? -148.61 4 1 ALA A 81 ? ? GLU A 84 ? ? -136.40 5 1 GLN A 103 ? ? PRO A 105 ? ? -149.70 6 1 HIS A 216 ? ? PRO A 217 ? ? -144.23 7 1 LEU A 285 ? ? TYR A 286 ? ? 144.03 8 1 GLY A 288 ? ? THR A 289 ? ? -146.95 9 1 GLN A 321 ? ? LEU A 322 ? ? 146.44 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 ALA A 13 ? ? 10.66 2 1 ILE A 15 ? ? 16.67 3 1 THR A 16 ? ? -10.56 4 1 HIS A 20 ? ? -11.35 5 1 VAL A 27 ? ? -10.21 6 1 GLN A 43 ? ? -10.09 7 1 ALA A 46 ? ? 10.52 8 1 SER A 80 ? ? 13.46 9 1 ALA A 81 ? ? 16.59 10 1 GLU A 84 ? ? 13.82 11 1 SER A 86 ? ? -11.63 12 1 ASP A 87 ? ? 10.57 13 1 ALA A 88 ? ? -10.21 14 1 GLY A 99 ? ? 14.45 15 1 GLN A 103 ? ? 22.77 16 1 GLY A 106 ? ? 10.83 17 1 GLU A 107 ? ? 12.55 18 1 ASN A 116 ? ? 17.31 19 1 ILE A 127 ? ? -10.51 20 1 GLY A 131 ? ? -11.05 21 1 LEU A 133 ? ? -12.99 22 1 ALA A 138 ? ? 10.59 23 1 ARG A 159 ? ? -17.06 24 1 GLN A 174 ? ? -11.35 25 1 SER A 186 ? ? -15.60 26 1 ILE A 191 ? ? 10.62 27 1 ASN A 207 ? ? -14.82 28 1 VAL A 209 C ? 11.61 29 1 ALA A 210 B ? -11.85 30 1 ALA A 215 ? ? -14.63 31 1 PHE A 229 ? ? -12.44 32 1 ASP A 231 ? ? -10.08 33 1 GLU A 238 ? ? -10.26 34 1 LYS A 243 ? ? -11.24 35 1 ALA A 245 ? ? -10.67 36 1 THR A 246 ? ? 13.79 37 1 ILE A 261 ? ? 10.65 38 1 TYR A 274 ? ? -10.77 39 1 ASN A 282 ? ? -10.15 40 1 ASP A 283 ? ? -12.73 41 1 LEU A 285 ? ? -13.46 42 1 GLY A 288 ? ? 13.30 43 1 GLU A 304 ? ? 10.67 44 1 PRO A 306 ? ? 10.82 45 1 LEU A 307 ? ? -13.09 46 1 GLN A 321 ? ? -13.50 47 1 LYS A 324 ? ? -11.20 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 GLN A 22 ? ? 0.074 'SIDE CHAIN' 2 1 ASP A 29 ? ? 0.074 'SIDE CHAIN' 3 1 ASP A 62 ? ? 0.081 'SIDE CHAIN' 4 1 GLU A 84 ? ? 0.074 'SIDE CHAIN' 5 1 ASN A 116 ? ? 0.073 'SIDE CHAIN' 6 1 ASN A 181 ? ? 0.089 'SIDE CHAIN' 7 1 GLU A 194 ? ? 0.095 'SIDE CHAIN' 8 1 ASP A 197 ? ? 0.073 'SIDE CHAIN' 9 1 GLU A 199 ? ? 0.096 'SIDE CHAIN' 10 1 ASN A 207 ? ? 0.098 'SIDE CHAIN' 11 1 GLU A 218 ? ? 0.071 'SIDE CHAIN' 12 1 GLU A 221 ? ? 0.073 'SIDE CHAIN' 13 1 TYR A 274 ? ? 0.098 'SIDE CHAIN' 14 1 ASN A 294 ? ? 0.076 'SIDE CHAIN' 15 1 GLN A 321 ? ? 0.071 'SIDE CHAIN' 16 1 ASP A 333 ? ? 0.079 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ILE 334 ? CA ? A ILE 321 CA 2 1 Y 1 A ILE 334 ? C ? A ILE 321 C 3 1 Y 1 A ILE 334 ? O ? A ILE 321 O 4 1 Y 1 A ILE 334 ? CB ? A ILE 321 CB 5 1 Y 1 A ILE 334 ? CG1 ? A ILE 321 CG1 6 1 Y 1 A ILE 334 ? CG2 ? A ILE 321 CG2 7 1 Y 1 A ILE 334 ? CD1 ? A ILE 321 CD1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 335 ? A GLU 322 2 1 Y 1 A THR 336 ? A THR 323 3 1 Y 1 A ARG 337 ? A ARG 324 4 1 Y 1 A GLN 338 ? A GLN 325 # _pdbx_chem_comp_identifier.comp_id AFP _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1.0 _pdbx_chem_comp_identifier.identifier a-D-Fruf1PO36PO3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,6-di-O-phosphono-alpha-D-fructofuranose AFP 3 'SULFATE ION' SO4 #