HEADER OXIDOREDUCTASE 29-APR-02 1LLQ TITLE CRYSTAL STRUCTURE OF MALIC ENZYME FROM ASCARIS SUUM COMPLEXED WITH TITLE 2 NICOTINAMIDE ADENINE DINUCLEOTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NAD-DEPENDENT MALIC ENZYME; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: NAD-ME; COMPND 5 EC: 1.1.1.38 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASCARIS SUUM; SOURCE 3 ORGANISM_COMMON: PIG ROUNDWORM; SOURCE 4 ORGANISM_TAXID: 6253 KEYWDS ROSSMANN FOLD, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR D.E.COLEMAN,G.S.JAGANNATHA,E.J.GOLDSMITH,P.F.COOK,B.G.HARRIS REVDAT 6 16-AUG-23 1LLQ 1 REMARK REVDAT 5 13-JUL-11 1LLQ 1 VERSN REVDAT 4 24-FEB-09 1LLQ 1 VERSN REVDAT 3 01-APR-03 1LLQ 1 JRNL REVDAT 2 07-AUG-02 1LLQ 1 JRNL REVDAT 1 08-MAY-02 1LLQ 0 JRNL AUTH D.E.COLEMAN,G.S.RAO,E.J.GOLDSMITH,P.F.COOK,B.G.HARRIS JRNL TITL CRYSTAL STRUCTURE OF THE MALIC ENZYME FROM ASCARIS SUUM JRNL TITL 2 COMPLEXED WITH NICOTINAMIDE ADENINE DINUCLEOTIDE AT 2.3 A JRNL TITL 3 RESOLUTION. JRNL REF BIOCHEMISTRY V. 41 6928 2002 JRNL REFN ISSN 0006-2960 JRNL PMID 12033925 JRNL DOI 10.1021/BI0255120 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 0.9 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.6 REMARK 3 NUMBER OF REFLECTIONS : 62146 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.247 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 3171 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.37 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3100 REMARK 3 BIN FREE R VALUE : 0.3390 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 247 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9494 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 88 REMARK 3 SOLVENT ATOMS : 74 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT CORRECTION USED THROUGHOUT REMARK 3 REFINEMENT. REMARK 4 REMARK 4 1LLQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAY-02. REMARK 100 THE DEPOSITION ID IS D_1000016061. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-FEB-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.947 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65007 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.22400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1QR6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, TARTRONATE, MAGNESIUM REMARK 280 SULFATE, TRIS, NAD, PH 7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.74333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 99.48667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 99.48667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 49.74333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A TETRAMER GENERATED FROM THE REMARK 300 DIMER IN THE ASYMMETRIC UNIT BY APPLING THE FOLLOWING ROTATION AND REMARK 300 TRANSLATION OPERATORS TO THE A AND B SUBUNITS: -0.500000 0.866025 REMARK 300 0.0 0.000 0.866025 0.500000 0.0 0.000 0.000000 0.000000 -1.0 149.230 REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 26040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 89140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -115.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 149.23000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 1 REMARK 465 ASP A 601 REMARK 465 SER A 602 REMARK 465 MET A 603 REMARK 465 ASP A 604 REMARK 465 GLY A 605 REMARK 465 LYS B 1 REMARK 465 PRO B 594 REMARK 465 VAL B 595 REMARK 465 PRO B 596 REMARK 465 VAL B 597 REMARK 465 VAL B 598 REMARK 465 ARG B 599 REMARK 465 HIS B 600 REMARK 465 ASP B 601 REMARK 465 SER B 602 REMARK 465 MET B 603 REMARK 465 ASP B 604 REMARK 465 GLY B 605 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 ASN A 369 REMARK 475 ARG A 370 REMARK 475 LYS A 371 REMARK 475 GLU A 372 REMARK 475 ASN B 369 REMARK 475 ARG B 370 REMARK 475 LYS B 371 REMARK 475 GLU B 372 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 HIS A 12 CG ND1 CD2 CE1 NE2 REMARK 480 GLU A 19 CG CD OE1 OE2 REMARK 480 LYS A 36 CG CD CE NZ REMARK 480 LYS A 245 CG CD CE NZ REMARK 480 LYS A 288 CG CD CE NZ REMARK 480 LYS A 316 CG CD CE NZ REMARK 480 LYS A 322 CG CD CE NZ REMARK 480 LYS A 350 CG CD CE NZ REMARK 480 ASP A 383 CG OD1 OD2 REMARK 480 ARG A 398 CG CD NE CZ NH1 NH2 REMARK 480 GLU A 422 CG CD OE1 OE2 REMARK 480 GLU A 425 CG CD OE1 OE2 REMARK 480 ASN A 451 CG OD1 ND2 REMARK 480 GLU A 466 CG CD OE1 OE2 REMARK 480 HIS A 470 CG ND1 CD2 CE1 NE2 REMARK 480 GLU A 586 CG CD OE1 OE2 REMARK 480 ARG A 590 CG CD NE CZ NH1 NH2 REMARK 480 HIS B 12 CG ND1 CD2 CE1 NE2 REMARK 480 LYS B 20 CG CD CE NZ REMARK 480 LYS B 143 CG CD CE NZ REMARK 480 LYS B 245 CG CD CE NZ REMARK 480 LYS B 288 CG CD CE NZ REMARK 480 LYS B 315 CG CD CE NZ REMARK 480 LYS B 322 CG CD CE NZ REMARK 480 ASN B 345 CG OD1 ND2 REMARK 480 LYS B 350 CG CD CE NZ REMARK 480 GLU B 351 CG CD OE1 OE2 REMARK 480 THR B 367 OG1 CG2 REMARK 480 ASP B 383 CG OD1 OD2 REMARK 480 ARG B 395 CG CD NE CZ NH1 NH2 REMARK 480 ARG B 398 CG CD NE CZ NH1 NH2 REMARK 480 GLU B 415 CG CD OE1 OE2 REMARK 480 GLU B 422 CG CD OE1 OE2 REMARK 480 GLU B 425 CG CD OE1 OE2 REMARK 480 LYS B 438 CG CD CE NZ REMARK 480 GLU B 444 CG CD OE1 OE2 REMARK 480 GLU B 466 CG CD OE1 OE2 REMARK 480 HIS B 470 CG ND1 CD2 CE1 NE2 REMARK 480 GLN B 476 CG CD OE1 NE2 REMARK 480 LYS B 548 CG CD CE NZ REMARK 480 GLU B 586 CG CD OE1 OE2 REMARK 480 GLN B 587 CG CD OE1 NE2 REMARK 480 ARG B 590 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 10 55.57 32.47 REMARK 500 ASN A 13 63.53 34.45 REMARK 500 PRO A 16 125.37 -39.49 REMARK 500 SER A 39 -136.25 48.81 REMARK 500 MET A 52 3.94 -65.90 REMARK 500 PRO A 70 43.14 -71.82 REMARK 500 TYR A 126 -106.03 -140.07 REMARK 500 THR A 127 -91.85 20.48 REMARK 500 PRO A 144 85.24 -66.66 REMARK 500 SER A 155 154.53 176.37 REMARK 500 ASP A 170 57.69 -95.58 REMARK 500 LEU A 183 104.13 -37.34 REMARK 500 LEU A 185 -26.45 -153.08 REMARK 500 ASP A 187 107.73 -55.67 REMARK 500 ASN A 275 -62.38 -27.44 REMARK 500 PHE A 292 149.86 -172.01 REMARK 500 LYS A 315 21.17 41.24 REMARK 500 GLU A 351 -66.46 -102.14 REMARK 500 ASP A 363 45.39 -96.83 REMARK 500 ASN A 369 14.17 -63.10 REMARK 500 ALA A 405 58.38 -140.03 REMARK 500 PHE A 412 77.67 -108.87 REMARK 500 PRO A 435 -164.70 -79.17 REMARK 500 ASN A 451 18.83 57.55 REMARK 500 TYR B 10 62.07 24.22 REMARK 500 GLU B 19 -56.41 -25.87 REMARK 500 SER B 39 -143.15 47.89 REMARK 500 PRO B 70 37.09 -75.02 REMARK 500 TYR B 126 -111.57 -136.31 REMARK 500 THR B 127 -97.98 28.13 REMARK 500 LYS B 315 26.49 41.75 REMARK 500 ASN B 345 3.86 -69.21 REMARK 500 LYS B 350 8.38 -69.68 REMARK 500 GLU B 351 -66.56 -91.72 REMARK 500 ASP B 361 -152.95 -121.66 REMARK 500 ASP B 363 56.90 -96.54 REMARK 500 LEU B 365 173.94 -55.71 REMARK 500 VAL B 378 -60.19 -26.40 REMARK 500 GLN B 379 -8.02 -58.06 REMARK 500 ASP B 383 49.77 -90.61 REMARK 500 ARG B 398 69.49 29.05 REMARK 500 THR B 407 -47.91 -19.08 REMARK 500 SER B 437 11.64 -60.87 REMARK 500 CYS B 441 144.57 -174.52 REMARK 500 PHE B 449 19.10 -63.24 REMARK 500 ASN B 451 50.84 76.89 REMARK 500 ALA B 480 -9.07 -59.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 1002 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE NUMBERING SYSTEM USED FOR THE COORDINATES REMARK 999 CORRESPONDS TO THE NUMBERING SYSTEM USED IN REMARK 999 PUBLISHED MUTATIONAL STUDIES, WHERE RESIDUE REMARK 999 1 (LYS) IS THE FIRST RESIDUE PRESENT IN THE REMARK 999 FULLY PROCESSED PROTEIN CHAIN. A 12 RESIDUE REMARK 999 MITOCHONDRIAL TRANSPORT SEQUENCE IS PRESENT REMARK 999 IN THE UNPROCESSED PROTEIN, BUT IS ABSENT REMARK 999 FROM PROCESSED PROTEIN AND THE PROTEIN PRESENT REMARK 999 IN THE CRYSTALS. DBREF 1LLQ A 1 605 UNP P27443 MAOM_ASCSU 39 643 DBREF 1LLQ B 1 605 UNP P27443 MAOM_ASCSU 39 643 SEQRES 1 A 605 LYS SER VAL ALA HIS HIS GLU ASP VAL TYR SER HIS ASN SEQRES 2 A 605 LEU PRO PRO MET ASP GLU LYS GLU MET ALA LEU TYR LYS SEQRES 3 A 605 LEU TYR ARG PRO GLU ARG VAL THR PRO LYS LYS ARG SER SEQRES 4 A 605 ALA GLU LEU LEU LYS GLU PRO ARG LEU ASN LYS GLY MET SEQRES 5 A 605 GLY PHE SER LEU TYR GLU ARG GLN TYR LEU GLY LEU HIS SEQRES 6 A 605 GLY LEU LEU PRO PRO ALA PHE MET THR GLN GLU GLN GLN SEQRES 7 A 605 ALA TYR ARG VAL ILE THR LYS LEU ARG GLU GLN PRO ASN SEQRES 8 A 605 ASP LEU ALA ARG TYR ILE GLN LEU ASP GLY LEU GLN ASP SEQRES 9 A 605 ARG ASN GLU LYS LEU PHE TYR ARG VAL VAL CYS ASP HIS SEQRES 10 A 605 VAL LYS GLU LEU MET PRO ILE VAL TYR THR PRO THR VAL SEQRES 11 A 605 GLY LEU ALA CYS GLN ASN PHE GLY TYR ILE TYR ARG LYS SEQRES 12 A 605 PRO LYS GLY LEU TYR ILE THR ILE ASN ASP ASN SER VAL SEQRES 13 A 605 SER LYS ILE TYR GLN ILE LEU SER ASN TRP HIS GLU GLU SEQRES 14 A 605 ASP VAL ARG ALA ILE VAL VAL THR ASP GLY GLU ARG ILE SEQRES 15 A 605 LEU GLY LEU GLY ASP LEU GLY ALA TYR GLY ILE GLY ILE SEQRES 16 A 605 PRO VAL GLY LYS LEU ALA LEU TYR VAL ALA LEU GLY GLY SEQRES 17 A 605 VAL GLN PRO LYS TRP CYS LEU PRO VAL LEU LEU ASP VAL SEQRES 18 A 605 GLY THR ASN ASN MET ASP LEU LEU ASN ASP PRO PHE TYR SEQRES 19 A 605 ILE GLY LEU ARG HIS LYS ARG VAL ARG GLY LYS ASP TYR SEQRES 20 A 605 ASP THR LEU LEU ASP ASN PHE MET LYS ALA CYS THR LYS SEQRES 21 A 605 LYS TYR GLY GLN LYS THR LEU ILE GLN PHE GLU ASP PHE SEQRES 22 A 605 ALA ASN PRO ASN ALA PHE ARG LEU LEU ASP LYS TYR GLN SEQRES 23 A 605 ASP LYS TYR THR MET PHE ASN ASP ASP ILE GLN GLY THR SEQRES 24 A 605 ALA SER VAL ILE VAL ALA GLY LEU LEU THR CYS THR ARG SEQRES 25 A 605 VAL THR LYS LYS LEU VAL SER GLN GLU LYS TYR LEU PHE SEQRES 26 A 605 PHE GLY ALA GLY ALA ALA SER THR GLY ILE ALA GLU MET SEQRES 27 A 605 ILE VAL HIS GLN MET GLN ASN GLU GLY ILE SER LYS GLU SEQRES 28 A 605 GLU ALA CYS ASN ARG ILE TYR LEU MET ASP ILE ASP GLY SEQRES 29 A 605 LEU VAL THR LYS ASN ARG LYS GLU MET ASN PRO ARG HIS SEQRES 30 A 605 VAL GLN PHE ALA LYS ASP MET PRO GLU THR THR SER ILE SEQRES 31 A 605 LEU GLU VAL ILE ARG ALA ALA ARG PRO GLY ALA LEU ILE SEQRES 32 A 605 GLY ALA SER THR VAL ARG GLY ALA PHE ASN GLU GLU VAL SEQRES 33 A 605 ILE ARG ALA MET ALA GLU ILE ASN GLU ARG PRO ILE ILE SEQRES 34 A 605 PHE ALA LEU SER ASN PRO THR SER LYS ALA GLU CYS THR SEQRES 35 A 605 ALA GLU GLU ALA TYR THR PHE THR ASN GLY ALA ALA LEU SEQRES 36 A 605 TYR ALA SER GLY SER PRO PHE PRO ASN PHE GLU LEU ASN SEQRES 37 A 605 GLY HIS THR TYR LYS PRO GLY GLN GLY ASN ASN ALA TYR SEQRES 38 A 605 ILE PHE PRO GLY VAL ALA LEU GLY THR ILE LEU PHE GLN SEQRES 39 A 605 ILE ARG HIS VAL ASP ASN ASP LEU PHE LEU LEU ALA ALA SEQRES 40 A 605 LYS LYS VAL ALA SER CYS VAL THR GLU ASP SER LEU LYS SEQRES 41 A 605 VAL GLY ARG VAL TYR PRO GLN LEU LYS GLU ILE ARG GLU SEQRES 42 A 605 ILE SER ILE GLN ILE ALA VAL GLU MET ALA LYS TYR CYS SEQRES 43 A 605 TYR LYS ASN GLY THR ALA ASN LEU TYR PRO GLN PRO GLU SEQRES 44 A 605 ASP LEU GLU LYS TYR VAL ARG ALA GLN VAL TYR ASN THR SEQRES 45 A 605 GLU TYR GLU GLU LEU ILE ASN ALA THR TYR ASP TRP PRO SEQRES 46 A 605 GLU GLN ASP MET ARG HIS GLY PHE PRO VAL PRO VAL VAL SEQRES 47 A 605 ARG HIS ASP SER MET ASP GLY SEQRES 1 B 605 LYS SER VAL ALA HIS HIS GLU ASP VAL TYR SER HIS ASN SEQRES 2 B 605 LEU PRO PRO MET ASP GLU LYS GLU MET ALA LEU TYR LYS SEQRES 3 B 605 LEU TYR ARG PRO GLU ARG VAL THR PRO LYS LYS ARG SER SEQRES 4 B 605 ALA GLU LEU LEU LYS GLU PRO ARG LEU ASN LYS GLY MET SEQRES 5 B 605 GLY PHE SER LEU TYR GLU ARG GLN TYR LEU GLY LEU HIS SEQRES 6 B 605 GLY LEU LEU PRO PRO ALA PHE MET THR GLN GLU GLN GLN SEQRES 7 B 605 ALA TYR ARG VAL ILE THR LYS LEU ARG GLU GLN PRO ASN SEQRES 8 B 605 ASP LEU ALA ARG TYR ILE GLN LEU ASP GLY LEU GLN ASP SEQRES 9 B 605 ARG ASN GLU LYS LEU PHE TYR ARG VAL VAL CYS ASP HIS SEQRES 10 B 605 VAL LYS GLU LEU MET PRO ILE VAL TYR THR PRO THR VAL SEQRES 11 B 605 GLY LEU ALA CYS GLN ASN PHE GLY TYR ILE TYR ARG LYS SEQRES 12 B 605 PRO LYS GLY LEU TYR ILE THR ILE ASN ASP ASN SER VAL SEQRES 13 B 605 SER LYS ILE TYR GLN ILE LEU SER ASN TRP HIS GLU GLU SEQRES 14 B 605 ASP VAL ARG ALA ILE VAL VAL THR ASP GLY GLU ARG ILE SEQRES 15 B 605 LEU GLY LEU GLY ASP LEU GLY ALA TYR GLY ILE GLY ILE SEQRES 16 B 605 PRO VAL GLY LYS LEU ALA LEU TYR VAL ALA LEU GLY GLY SEQRES 17 B 605 VAL GLN PRO LYS TRP CYS LEU PRO VAL LEU LEU ASP VAL SEQRES 18 B 605 GLY THR ASN ASN MET ASP LEU LEU ASN ASP PRO PHE TYR SEQRES 19 B 605 ILE GLY LEU ARG HIS LYS ARG VAL ARG GLY LYS ASP TYR SEQRES 20 B 605 ASP THR LEU LEU ASP ASN PHE MET LYS ALA CYS THR LYS SEQRES 21 B 605 LYS TYR GLY GLN LYS THR LEU ILE GLN PHE GLU ASP PHE SEQRES 22 B 605 ALA ASN PRO ASN ALA PHE ARG LEU LEU ASP LYS TYR GLN SEQRES 23 B 605 ASP LYS TYR THR MET PHE ASN ASP ASP ILE GLN GLY THR SEQRES 24 B 605 ALA SER VAL ILE VAL ALA GLY LEU LEU THR CYS THR ARG SEQRES 25 B 605 VAL THR LYS LYS LEU VAL SER GLN GLU LYS TYR LEU PHE SEQRES 26 B 605 PHE GLY ALA GLY ALA ALA SER THR GLY ILE ALA GLU MET SEQRES 27 B 605 ILE VAL HIS GLN MET GLN ASN GLU GLY ILE SER LYS GLU SEQRES 28 B 605 GLU ALA CYS ASN ARG ILE TYR LEU MET ASP ILE ASP GLY SEQRES 29 B 605 LEU VAL THR LYS ASN ARG LYS GLU MET ASN PRO ARG HIS SEQRES 30 B 605 VAL GLN PHE ALA LYS ASP MET PRO GLU THR THR SER ILE SEQRES 31 B 605 LEU GLU VAL ILE ARG ALA ALA ARG PRO GLY ALA LEU ILE SEQRES 32 B 605 GLY ALA SER THR VAL ARG GLY ALA PHE ASN GLU GLU VAL SEQRES 33 B 605 ILE ARG ALA MET ALA GLU ILE ASN GLU ARG PRO ILE ILE SEQRES 34 B 605 PHE ALA LEU SER ASN PRO THR SER LYS ALA GLU CYS THR SEQRES 35 B 605 ALA GLU GLU ALA TYR THR PHE THR ASN GLY ALA ALA LEU SEQRES 36 B 605 TYR ALA SER GLY SER PRO PHE PRO ASN PHE GLU LEU ASN SEQRES 37 B 605 GLY HIS THR TYR LYS PRO GLY GLN GLY ASN ASN ALA TYR SEQRES 38 B 605 ILE PHE PRO GLY VAL ALA LEU GLY THR ILE LEU PHE GLN SEQRES 39 B 605 ILE ARG HIS VAL ASP ASN ASP LEU PHE LEU LEU ALA ALA SEQRES 40 B 605 LYS LYS VAL ALA SER CYS VAL THR GLU ASP SER LEU LYS SEQRES 41 B 605 VAL GLY ARG VAL TYR PRO GLN LEU LYS GLU ILE ARG GLU SEQRES 42 B 605 ILE SER ILE GLN ILE ALA VAL GLU MET ALA LYS TYR CYS SEQRES 43 B 605 TYR LYS ASN GLY THR ALA ASN LEU TYR PRO GLN PRO GLU SEQRES 44 B 605 ASP LEU GLU LYS TYR VAL ARG ALA GLN VAL TYR ASN THR SEQRES 45 B 605 GLU TYR GLU GLU LEU ILE ASN ALA THR TYR ASP TRP PRO SEQRES 46 B 605 GLU GLN ASP MET ARG HIS GLY PHE PRO VAL PRO VAL VAL SEQRES 47 B 605 ARG HIS ASP SER MET ASP GLY HET NAD A1001 44 HET NAD B1002 44 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE FORMUL 3 NAD 2(C21 H27 N7 O14 P2) FORMUL 5 HOH *74(H2 O) HELIX 1 1 ASP A 18 ARG A 29 1 12 HELIX 2 2 ARG A 38 LYS A 44 1 7 HELIX 3 3 LYS A 50 PHE A 54 5 5 HELIX 4 4 SER A 55 LEU A 62 1 8 HELIX 5 5 THR A 74 GLU A 88 1 15 HELIX 6 6 ASN A 91 ASP A 104 1 14 HELIX 7 7 ASN A 106 HIS A 117 1 12 HELIX 8 8 HIS A 117 TYR A 126 1 10 HELIX 9 9 PRO A 128 GLY A 138 1 11 HELIX 10 10 ASN A 152 ASN A 154 5 3 HELIX 11 11 SER A 155 ASN A 165 1 11 HELIX 12 12 LEU A 188 GLY A 192 5 5 HELIX 13 13 ILE A 193 GLY A 208 1 16 HELIX 14 14 GLN A 210 LYS A 212 5 3 HELIX 15 15 ASN A 225 ASP A 231 1 7 HELIX 16 16 GLY A 244 GLY A 263 1 20 HELIX 17 17 ALA A 274 GLN A 286 1 13 HELIX 18 18 ASP A 294 LYS A 315 1 22 HELIX 19 19 LEU A 317 GLU A 321 5 5 HELIX 20 20 GLY A 329 ASN A 345 1 17 HELIX 21 21 ALA A 353 ASN A 355 5 3 HELIX 22 22 ASN A 374 GLN A 379 1 6 HELIX 23 23 SER A 389 ARG A 398 1 10 HELIX 24 24 ASN A 413 ASN A 424 1 12 HELIX 25 25 PRO A 435 ALA A 439 5 5 HELIX 26 26 THR A 442 PHE A 449 1 8 HELIX 27 27 ASN A 478 TYR A 481 5 4 HELIX 28 28 ILE A 482 PHE A 493 1 12 HELIX 29 29 ASP A 499 CYS A 513 1 15 HELIX 30 30 THR A 515 LYS A 520 1 6 HELIX 31 31 GLN A 527 LYS A 529 5 3 HELIX 32 32 GLU A 530 ASN A 549 1 20 HELIX 33 33 ASP A 560 ALA A 567 1 8 HELIX 34 34 PRO A 585 ARG A 590 5 6 HELIX 35 35 ASP B 18 ARG B 29 1 12 HELIX 36 36 ARG B 38 LYS B 44 1 7 HELIX 37 37 LYS B 50 PHE B 54 5 5 HELIX 38 38 SER B 55 LEU B 62 1 8 HELIX 39 39 THR B 74 GLU B 88 1 15 HELIX 40 40 ASN B 91 ASP B 104 1 14 HELIX 41 41 ASN B 106 HIS B 117 1 12 HELIX 42 42 HIS B 117 TYR B 126 1 10 HELIX 43 43 PRO B 128 GLY B 138 1 11 HELIX 44 44 ASN B 152 ASN B 154 5 3 HELIX 45 45 SER B 155 SER B 164 1 10 HELIX 46 46 LEU B 188 GLY B 192 5 5 HELIX 47 47 ILE B 193 GLY B 208 1 16 HELIX 48 48 GLN B 210 LYS B 212 5 3 HELIX 49 49 ASN B 225 ASP B 231 1 7 HELIX 50 50 GLY B 244 GLY B 263 1 20 HELIX 51 51 ALA B 274 GLN B 286 1 13 HELIX 52 52 ASP B 294 LYS B 315 1 22 HELIX 53 53 GLY B 329 ASN B 345 1 17 HELIX 54 54 SER B 349 ASN B 355 1 7 HELIX 55 55 ASN B 374 GLN B 379 1 6 HELIX 56 56 ILE B 390 ARG B 395 1 6 HELIX 57 57 ASN B 413 ASN B 424 1 12 HELIX 58 58 PRO B 435 ALA B 439 5 5 HELIX 59 59 THR B 442 PHE B 449 1 8 HELIX 60 60 ASN B 478 TYR B 481 5 4 HELIX 61 61 ILE B 482 GLN B 494 1 13 HELIX 62 62 ASP B 499 CYS B 513 1 15 HELIX 63 63 THR B 515 VAL B 521 1 7 HELIX 64 64 GLN B 527 LYS B 529 5 3 HELIX 65 65 GLU B 530 ASN B 549 1 20 HELIX 66 66 ASP B 560 VAL B 569 1 10 HELIX 67 67 PRO B 585 ARG B 590 1 6 SHEET 1 A 5 LEU A 147 THR A 150 0 SHEET 2 A 5 CYS A 214 ASP A 220 1 O PRO A 216 N LEU A 147 SHEET 3 A 5 ALA A 173 THR A 177 1 N THR A 177 O LEU A 219 SHEET 4 A 5 LEU A 267 PHE A 270 1 O LEU A 267 N ILE A 174 SHEET 5 A 5 MET A 291 ASN A 293 1 O PHE A 292 N PHE A 270 SHEET 1 B 7 GLY A 364 LEU A 365 0 SHEET 2 B 7 ILE A 357 ASP A 361 -1 N ASP A 361 O GLY A 364 SHEET 3 B 7 TYR A 323 PHE A 326 1 N PHE A 325 O TYR A 358 SHEET 4 B 7 ALA A 401 GLY A 404 1 O ALA A 401 N LEU A 324 SHEET 5 B 7 ILE A 428 ALA A 431 1 O PHE A 430 N GLY A 404 SHEET 6 B 7 LEU A 455 SER A 458 1 O LEU A 455 N ILE A 429 SHEET 7 B 7 GLY A 475 GLN A 476 1 O GLY A 475 N SER A 458 SHEET 1 C 2 PHE A 465 LEU A 467 0 SHEET 2 C 2 HIS A 470 TYR A 472 -1 O TYR A 472 N PHE A 465 SHEET 1 D 5 LEU B 147 THR B 150 0 SHEET 2 D 5 CYS B 214 ASP B 220 1 O LEU B 218 N LEU B 147 SHEET 3 D 5 ALA B 173 THR B 177 1 N THR B 177 O LEU B 219 SHEET 4 D 5 LEU B 267 PHE B 270 1 O GLN B 269 N ILE B 174 SHEET 5 D 5 MET B 291 ASN B 293 1 O PHE B 292 N PHE B 270 SHEET 1 E 7 GLY B 364 LEU B 365 0 SHEET 2 E 7 ILE B 357 ASP B 361 -1 N ASP B 361 O GLY B 364 SHEET 3 E 7 TYR B 323 PHE B 326 1 N PHE B 325 O TYR B 358 SHEET 4 E 7 ALA B 401 GLY B 404 1 O ILE B 403 N LEU B 324 SHEET 5 E 7 ILE B 428 ALA B 431 1 O PHE B 430 N GLY B 404 SHEET 6 E 7 LEU B 455 SER B 458 1 O LEU B 455 N ILE B 429 SHEET 7 E 7 GLY B 475 GLN B 476 1 O GLY B 475 N SER B 458 SHEET 1 F 2 PHE B 465 LEU B 467 0 SHEET 2 F 2 HIS B 470 TYR B 472 -1 O HIS B 470 N LEU B 467 CISPEP 1 ASN A 434 PRO A 435 0 -1.34 CISPEP 2 TYR A 555 PRO A 556 0 -1.02 CISPEP 3 ASN B 434 PRO B 435 0 -1.46 CISPEP 4 TYR B 555 PRO B 556 0 -1.63 SITE 1 AC1 20 ASN A 275 THR A 299 PHE A 326 GLY A 327 SITE 2 AC1 20 ALA A 328 GLY A 329 ALA A 330 ALA A 331 SITE 3 AC1 20 ASP A 361 ILE A 362 ALA A 405 SER A 406 SITE 4 AC1 20 VAL A 408 LEU A 432 SER A 433 ASN A 434 SITE 5 AC1 20 GLY A 459 GLY A 477 ASN A 479 HOH A2013 SITE 1 AC2 18 ASN B 275 THR B 299 PHE B 326 ALA B 328 SITE 2 AC2 18 GLY B 329 ALA B 330 ALA B 331 ASP B 361 SITE 3 AC2 18 ILE B 362 ALA B 405 SER B 406 VAL B 408 SITE 4 AC2 18 LEU B 432 SER B 433 ASN B 434 GLY B 459 SITE 5 AC2 18 GLY B 477 ASN B 479 CRYST1 130.620 130.620 149.230 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007656 0.004420 0.000000 0.00000 SCALE2 0.000000 0.008840 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006701 0.00000