HEADER LIPID BINDING PROTEIN 02-MAY-02 1LN2 TITLE CRYSTAL STRUCTURE OF HUMAN PHOSPHATIDYLCHOLINE TRANSFER PROTEIN IN TITLE 2 COMPLEX WITH DILINOLEOYLPHOSPHATIDYLCHOLINE (SELENO-MET PROTEIN) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHATIDYLCHOLINE TRANSFER PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PC-TP; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS START DOMAIN, LIPID BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.L.RODERICK,W.W.CHAN,D.S.AGATE,L.R.OLSEN,M.W.VETTING, AUTHOR 2 K.R.RAJASHANKAR,D.E.COHEN REVDAT 4 09-OCT-24 1LN2 1 REMARK SEQADV LINK REVDAT 3 11-OCT-17 1LN2 1 REMARK REVDAT 2 24-FEB-09 1LN2 1 VERSN REVDAT 1 26-JUN-02 1LN2 0 JRNL AUTH S.L.RODERICK,W.W.CHAN,D.S.AGATE,L.R.OLSEN,M.W.VETTING, JRNL AUTH 2 K.R.RAJASHANKAR,D.E.COHEN JRNL TITL STRUCTURE OF HUMAN PHOSPHATIDYLCHOLINE TRANSFER PROTEIN IN JRNL TITL 2 COMPLEX WITH ITS LIGAND. JRNL REF NAT.STRUCT.BIOL. V. 9 507 2002 JRNL REFN ISSN 1072-8368 JRNL PMID 12055623 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 67.35 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 16893 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.293 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 822 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.010 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2528 REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3340 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 108 REMARK 3 SOLVENT ATOMS : 68 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.43 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.71 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.019 REMARK 3 BOND ANGLES (DEGREES) : 2.000 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.160 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.750 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.000 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.300 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.760 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 41.98 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : PC2_NEW.PAR REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : PC2_NEW.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1LN2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAY-02. REMARK 100 THE DEPOSITION ID IS D_1000016097. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-01 REMARK 200 TEMPERATURE (KELVIN) : 117 REMARK 200 PH : 5.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X9A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MAR REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16893 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 67.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.04800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM FORMATE, SODIUM ACETATE, PH REMARK 280 5.7, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z REMARK 290 4555 Y+1/2,-X+1/2,Z REMARK 290 5555 -X+1/2,Y+1/2,-Z REMARK 290 6555 X+1/2,-Y+1/2,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 67.35000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 67.35000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 67.35000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 67.35000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 67.35000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 67.35000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 67.35000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 67.35000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A MONOMER. TWO MONOMERS ARE REMARK 300 RELATED BY APPROXIMATELY (1/2,1/2,1/2). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 GLU A 2 REMARK 465 LEU A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 GLY A 6 REMARK 465 SER A 7 REMARK 465 LEU A 211 REMARK 465 LYS A 212 REMARK 465 LYS A 213 REMARK 465 THR A 214 REMARK 465 MSE B 1 REMARK 465 GLU B 2 REMARK 465 LEU B 3 REMARK 465 ALA B 4 REMARK 465 ALA B 5 REMARK 465 GLY B 6 REMARK 465 SER B 7 REMARK 465 LEU B 211 REMARK 465 LYS B 212 REMARK 465 LYS B 213 REMARK 465 THR B 214 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 19 CD GLU A 19 OE2 0.098 REMARK 500 CYS B 63 CB CYS B 63 SG 0.141 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 179 C - N - CA ANGL. DEV. = 11.8 DEGREES REMARK 500 PRO B 179 C - N - CA ANGL. DEV. = 9.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 9 -168.84 -104.06 REMARK 500 GLU A 11 -74.03 -26.31 REMARK 500 ALA A 18 -79.00 -51.42 REMARK 500 GLU A 19 -19.99 -41.28 REMARK 500 ASP A 29 64.06 -63.32 REMARK 500 LEU A 33 -39.88 -164.91 REMARK 500 SER A 37 15.64 36.34 REMARK 500 ASP A 62 5.89 83.44 REMARK 500 GLN A 83 -18.03 -36.07 REMARK 500 ASN A 94 -127.75 62.65 REMARK 500 MSE A 109 137.89 -38.38 REMARK 500 MSE A 125 125.09 -34.48 REMARK 500 LYS A 166 -122.95 -86.86 REMARK 500 ASN A 194 -53.51 -132.76 REMARK 500 ALA B 18 -71.20 -61.60 REMARK 500 LEU B 25 -1.53 -140.32 REMARK 500 ASP B 29 35.45 -81.53 REMARK 500 LEU B 33 -29.65 -153.13 REMARK 500 SER B 37 43.39 27.36 REMARK 500 ASP B 46 65.97 -114.42 REMARK 500 LYS B 47 -28.53 -18.42 REMARK 500 ASP B 62 5.11 84.36 REMARK 500 ASN B 94 -139.73 78.99 REMARK 500 ASN B 111 -168.34 -60.00 REMARK 500 LYS B 166 -109.58 -109.33 REMARK 500 LYS B 201 -71.52 -61.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR B 100 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DLP A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DLP B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1LN1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN PHOSPHATIDYLCHOLINE TRANSFER PROTEIN IN REMARK 900 COMPLEX WITH DILINOLEOYLPHOSPHATIDYLCHOLINE REMARK 900 RELATED ID: 1LN3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN PHOSPHATIDYLCHOLINE TRANSFER PROTEIN IN REMARK 900 COMPLEX WITH PALMITOYL-LINOLEOYL PHOSPHATIDYLCHOLINE DBREF 1LN2 A 1 214 UNP Q9UKL6 PPCT_HUMAN 1 214 DBREF 1LN2 B 1 214 UNP Q9UKL6 PPCT_HUMAN 1 214 SEQADV 1LN2 MSE A 1 UNP Q9UKL6 MET 1 MODIFIED RESIDUE SEQADV 1LN2 MSE A 73 UNP Q9UKL6 MET 73 MODIFIED RESIDUE SEQADV 1LN2 MSE A 109 UNP Q9UKL6 MET 109 MODIFIED RESIDUE SEQADV 1LN2 MSE A 125 UNP Q9UKL6 MET 125 MODIFIED RESIDUE SEQADV 1LN2 MSE A 140 UNP Q9UKL6 MET 140 MODIFIED RESIDUE SEQADV 1LN2 MSE A 173 UNP Q9UKL6 MET 173 MODIFIED RESIDUE SEQADV 1LN2 MSE A 203 UNP Q9UKL6 MET 203 MODIFIED RESIDUE SEQADV 1LN2 MSE B 1 UNP Q9UKL6 MET 1 MODIFIED RESIDUE SEQADV 1LN2 MSE B 73 UNP Q9UKL6 MET 73 MODIFIED RESIDUE SEQADV 1LN2 MSE B 109 UNP Q9UKL6 MET 109 MODIFIED RESIDUE SEQADV 1LN2 MSE B 125 UNP Q9UKL6 MET 125 MODIFIED RESIDUE SEQADV 1LN2 MSE B 140 UNP Q9UKL6 MET 140 MODIFIED RESIDUE SEQADV 1LN2 MSE B 173 UNP Q9UKL6 MET 173 MODIFIED RESIDUE SEQADV 1LN2 MSE B 203 UNP Q9UKL6 MET 203 MODIFIED RESIDUE SEQRES 1 A 214 MSE GLU LEU ALA ALA GLY SER PHE SER GLU GLU GLN PHE SEQRES 2 A 214 TRP GLU ALA CYS ALA GLU LEU GLN GLN PRO ALA LEU ALA SEQRES 3 A 214 GLY ALA ASP TRP GLN LEU LEU VAL GLU THR SER GLY ILE SEQRES 4 A 214 SER ILE TYR ARG LEU LEU ASP LYS LYS THR GLY LEU TYR SEQRES 5 A 214 GLU TYR LYS VAL PHE GLY VAL LEU GLU ASP CYS SER PRO SEQRES 6 A 214 THR LEU LEU ALA ASP ILE TYR MSE ASP SER ASP TYR ARG SEQRES 7 A 214 LYS GLN TRP ASP GLN TYR VAL LYS GLU LEU TYR GLU GLN SEQRES 8 A 214 GLU CYS ASN GLY GLU THR VAL VAL TYR TRP GLU VAL LYS SEQRES 9 A 214 TYR PRO PHE PRO MSE SER ASN ARG ASP TYR VAL TYR LEU SEQRES 10 A 214 ARG GLN ARG ARG ASP LEU ASP MSE GLU GLY ARG LYS ILE SEQRES 11 A 214 HIS VAL ILE LEU ALA ARG SER THR SER MSE PRO GLN LEU SEQRES 12 A 214 GLY GLU ARG SER GLY VAL ILE ARG VAL LYS GLN TYR LYS SEQRES 13 A 214 GLN SER LEU ALA ILE GLU SER ASP GLY LYS LYS GLY SER SEQRES 14 A 214 LYS VAL PHE MSE TYR TYR PHE ASP ASN PRO GLY GLY GLN SEQRES 15 A 214 ILE PRO SER TRP LEU ILE ASN TRP ALA ALA LYS ASN GLY SEQRES 16 A 214 VAL PRO ASN PHE LEU LYS ASP MSE ALA ARG ALA CYS GLN SEQRES 17 A 214 ASN TYR LEU LYS LYS THR SEQRES 1 B 214 MSE GLU LEU ALA ALA GLY SER PHE SER GLU GLU GLN PHE SEQRES 2 B 214 TRP GLU ALA CYS ALA GLU LEU GLN GLN PRO ALA LEU ALA SEQRES 3 B 214 GLY ALA ASP TRP GLN LEU LEU VAL GLU THR SER GLY ILE SEQRES 4 B 214 SER ILE TYR ARG LEU LEU ASP LYS LYS THR GLY LEU TYR SEQRES 5 B 214 GLU TYR LYS VAL PHE GLY VAL LEU GLU ASP CYS SER PRO SEQRES 6 B 214 THR LEU LEU ALA ASP ILE TYR MSE ASP SER ASP TYR ARG SEQRES 7 B 214 LYS GLN TRP ASP GLN TYR VAL LYS GLU LEU TYR GLU GLN SEQRES 8 B 214 GLU CYS ASN GLY GLU THR VAL VAL TYR TRP GLU VAL LYS SEQRES 9 B 214 TYR PRO PHE PRO MSE SER ASN ARG ASP TYR VAL TYR LEU SEQRES 10 B 214 ARG GLN ARG ARG ASP LEU ASP MSE GLU GLY ARG LYS ILE SEQRES 11 B 214 HIS VAL ILE LEU ALA ARG SER THR SER MSE PRO GLN LEU SEQRES 12 B 214 GLY GLU ARG SER GLY VAL ILE ARG VAL LYS GLN TYR LYS SEQRES 13 B 214 GLN SER LEU ALA ILE GLU SER ASP GLY LYS LYS GLY SER SEQRES 14 B 214 LYS VAL PHE MSE TYR TYR PHE ASP ASN PRO GLY GLY GLN SEQRES 15 B 214 ILE PRO SER TRP LEU ILE ASN TRP ALA ALA LYS ASN GLY SEQRES 16 B 214 VAL PRO ASN PHE LEU LYS ASP MSE ALA ARG ALA CYS GLN SEQRES 17 B 214 ASN TYR LEU LYS LYS THR MODRES 1LN2 MSE A 73 MET SELENOMETHIONINE MODRES 1LN2 MSE A 109 MET SELENOMETHIONINE MODRES 1LN2 MSE A 125 MET SELENOMETHIONINE MODRES 1LN2 MSE A 140 MET SELENOMETHIONINE MODRES 1LN2 MSE A 173 MET SELENOMETHIONINE MODRES 1LN2 MSE A 203 MET SELENOMETHIONINE MODRES 1LN2 MSE B 73 MET SELENOMETHIONINE MODRES 1LN2 MSE B 109 MET SELENOMETHIONINE MODRES 1LN2 MSE B 125 MET SELENOMETHIONINE MODRES 1LN2 MSE B 140 MET SELENOMETHIONINE MODRES 1LN2 MSE B 173 MET SELENOMETHIONINE MODRES 1LN2 MSE B 203 MET SELENOMETHIONINE HET MSE A 73 8 HET MSE A 109 8 HET MSE A 125 8 HET MSE A 140 8 HET MSE A 173 8 HET MSE A 203 8 HET MSE B 73 8 HET MSE B 109 8 HET MSE B 125 8 HET MSE B 140 8 HET MSE B 173 8 HET MSE B 203 8 HET DLP A 300 54 HET DLP B 301 54 HETNAM MSE SELENOMETHIONINE HETNAM DLP 1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE HETSYN DLP DI-LINOLEOYL-3-SN-PHOSPHATIDYLCHOLINE FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 3 DLP 2(C44 H80 N O8 P) FORMUL 5 HOH *68(H2 O) HELIX 1 1 SER A 9 GLN A 22 1 14 HELIX 2 2 SER A 64 ASP A 74 1 11 HELIX 3 3 ASP A 74 ASP A 82 1 9 HELIX 4 4 ASP A 124 ARG A 128 5 5 HELIX 5 5 PRO A 184 ASN A 194 1 11 HELIX 6 6 ASN A 194 ASN A 209 1 16 HELIX 7 7 SER B 9 GLN B 22 1 14 HELIX 8 8 SER B 64 ASP B 74 1 11 HELIX 9 9 ASP B 74 ASP B 82 1 9 HELIX 10 10 ASP B 124 ARG B 128 5 5 HELIX 11 11 PRO B 184 ASN B 194 1 11 HELIX 12 12 ASN B 194 TYR B 210 1 17 SHEET 1 A 9 VAL A 34 THR A 36 0 SHEET 2 A 9 ILE A 39 LEU A 45 -1 O ILE A 41 N VAL A 34 SHEET 3 A 9 TYR A 52 LEU A 60 -1 O LYS A 55 N TYR A 42 SHEET 4 A 9 SER A 169 ASN A 178 -1 O MSE A 173 N VAL A 56 SHEET 5 A 9 GLN A 154 SER A 163 -1 N ALA A 160 O PHE A 172 SHEET 6 A 9 ILE A 130 SER A 137 -1 N ALA A 135 O GLN A 157 SHEET 7 A 9 ARG A 112 LEU A 123 -1 N LEU A 117 O ARG A 136 SHEET 8 A 9 GLU A 96 VAL A 103 -1 N VAL A 99 O TYR A 116 SHEET 9 A 9 VAL A 85 CYS A 93 -1 N GLU A 87 O GLU A 102 SHEET 1 B 8 VAL A 34 THR A 36 0 SHEET 2 B 8 ILE A 39 LEU A 45 -1 O ILE A 41 N VAL A 34 SHEET 3 B 8 TYR A 52 LEU A 60 -1 O LYS A 55 N TYR A 42 SHEET 4 B 8 SER A 169 ASN A 178 -1 O MSE A 173 N VAL A 56 SHEET 5 B 8 GLN A 154 SER A 163 -1 N ALA A 160 O PHE A 172 SHEET 6 B 8 ILE A 130 SER A 137 -1 N ALA A 135 O GLN A 157 SHEET 7 B 8 ARG A 112 LEU A 123 -1 N LEU A 117 O ARG A 136 SHEET 8 B 8 ILE A 150 VAL A 152 1 O ILE A 150 N ASP A 113 SHEET 1 C 9 GLN B 31 THR B 36 0 SHEET 2 C 9 ILE B 39 LEU B 45 -1 O ARG B 43 N GLN B 31 SHEET 3 C 9 TYR B 52 LEU B 60 -1 O LYS B 55 N TYR B 42 SHEET 4 C 9 SER B 169 ASP B 177 -1 O TYR B 175 N TYR B 54 SHEET 5 C 9 TYR B 155 SER B 163 -1 N LYS B 156 O PHE B 176 SHEET 6 C 9 ILE B 130 SER B 137 -1 N HIS B 131 O ILE B 161 SHEET 7 C 9 ARG B 112 LEU B 123 -1 N LEU B 117 O ARG B 136 SHEET 8 C 9 GLU B 96 VAL B 103 -1 N VAL B 103 O ARG B 112 SHEET 9 C 9 VAL B 85 CYS B 93 -1 N CYS B 93 O GLU B 96 SHEET 1 D 8 GLN B 31 THR B 36 0 SHEET 2 D 8 ILE B 39 LEU B 45 -1 O ARG B 43 N GLN B 31 SHEET 3 D 8 TYR B 52 LEU B 60 -1 O LYS B 55 N TYR B 42 SHEET 4 D 8 SER B 169 ASP B 177 -1 O TYR B 175 N TYR B 54 SHEET 5 D 8 TYR B 155 SER B 163 -1 N LYS B 156 O PHE B 176 SHEET 6 D 8 ILE B 130 SER B 137 -1 N HIS B 131 O ILE B 161 SHEET 7 D 8 ARG B 112 LEU B 123 -1 N LEU B 117 O ARG B 136 SHEET 8 D 8 ILE B 150 VAL B 152 1 O VAL B 152 N ASP B 113 LINK C TYR A 72 N MSE A 73 1555 1555 1.33 LINK C MSE A 73 N ASP A 74 1555 1555 1.33 LINK C PRO A 108 N MSE A 109 1555 1555 1.34 LINK C MSE A 109 N SER A 110 1555 1555 1.32 LINK C ASP A 124 N MSE A 125 1555 1555 1.33 LINK C MSE A 125 N GLU A 126 1555 1555 1.35 LINK C SER A 139 N MSE A 140 1555 1555 1.33 LINK C MSE A 140 N PRO A 141 1555 1555 1.33 LINK C PHE A 172 N MSE A 173 1555 1555 1.33 LINK C MSE A 173 N TYR A 174 1555 1555 1.33 LINK C ASP A 202 N MSE A 203 1555 1555 1.32 LINK C MSE A 203 N ALA A 204 1555 1555 1.33 LINK C TYR B 72 N MSE B 73 1555 1555 1.33 LINK C MSE B 73 N ASP B 74 1555 1555 1.33 LINK C PRO B 108 N MSE B 109 1555 1555 1.32 LINK C MSE B 109 N SER B 110 1555 1555 1.33 LINK C ASP B 124 N MSE B 125 1555 1555 1.34 LINK C MSE B 125 N GLU B 126 1555 1555 1.35 LINK C SER B 139 N MSE B 140 1555 1555 1.32 LINK C MSE B 140 N PRO B 141 1555 1555 1.31 LINK C PHE B 172 N MSE B 173 1555 1555 1.33 LINK C MSE B 173 N TYR B 174 1555 1555 1.32 LINK C ASP B 202 N MSE B 203 1555 1555 1.32 LINK C MSE B 203 N ALA B 204 1555 1555 1.32 CISPEP 1 PHE A 107 PRO A 108 0 6.03 CISPEP 2 PHE B 107 PRO B 108 0 -0.56 SITE 1 AC1 22 LEU A 33 VAL A 34 ILE A 41 TYR A 54 SITE 2 AC1 22 LEU A 68 TYR A 72 ARG A 78 TYR A 84 SITE 3 AC1 22 TRP A 101 VAL A 103 TYR A 114 TYR A 116 SITE 4 AC1 22 TYR A 155 GLN A 157 LEU A 159 MSE A 173 SITE 5 AC1 22 TYR A 175 ALA A 192 VAL A 196 PHE A 199 SITE 6 AC1 22 LEU A 200 HOH A2013 SITE 1 AC2 21 LEU B 33 VAL B 34 ILE B 41 TYR B 54 SITE 2 AC2 21 VAL B 56 TYR B 72 ARG B 78 TYR B 84 SITE 3 AC2 21 TRP B 101 VAL B 103 TYR B 105 TYR B 114 SITE 4 AC2 21 TYR B 116 TYR B 155 GLN B 157 LEU B 159 SITE 5 AC2 21 MSE B 173 TYR B 175 ALA B 192 VAL B 196 SITE 6 AC2 21 PHE B 199 CRYST1 134.700 134.700 82.700 90.00 90.00 90.00 P 4 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007424 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007424 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012092 0.00000 CONECT 511 521 CONECT 521 511 522 CONECT 522 521 523 525 CONECT 523 522 524 529 CONECT 524 523 CONECT 525 522 526 CONECT 526 525 527 CONECT 527 526 528 CONECT 528 527 CONECT 529 523 CONECT 838 843 CONECT 843 838 844 CONECT 844 843 845 847 CONECT 845 844 846 851 CONECT 846 845 CONECT 847 844 848 CONECT 848 847 849 CONECT 849 848 850 CONECT 850 849 CONECT 851 845 CONECT 983 989 CONECT 989 983 990 CONECT 990 989 991 993 CONECT 991 990 992 997 CONECT 992 991 CONECT 993 990 994 CONECT 994 993 995 CONECT 995 994 996 CONECT 996 995 CONECT 997 991 CONECT 1102 1106 CONECT 1106 1102 1107 CONECT 1107 1106 1108 1110 CONECT 1108 1107 1109 1114 CONECT 1109 1108 CONECT 1110 1107 1111 CONECT 1111 1110 1112 CONECT 1112 1111 1113 CONECT 1113 1112 CONECT 1114 1108 CONECT 1353 1362 CONECT 1362 1353 1363 CONECT 1363 1362 1364 1366 CONECT 1364 1363 1365 1370 CONECT 1365 1364 CONECT 1366 1363 1367 CONECT 1367 1366 1368 CONECT 1368 1367 1369 CONECT 1369 1368 CONECT 1370 1364 CONECT 1601 1607 CONECT 1607 1601 1608 CONECT 1608 1607 1609 1611 CONECT 1609 1608 1610 1615 CONECT 1610 1609 CONECT 1611 1608 1612 CONECT 1612 1611 1613 CONECT 1613 1612 1614 CONECT 1614 1613 CONECT 1615 1609 CONECT 2182 2192 CONECT 2192 2182 2193 CONECT 2193 2192 2194 2196 CONECT 2194 2193 2195 2200 CONECT 2195 2194 CONECT 2196 2193 2197 CONECT 2197 2196 2198 CONECT 2198 2197 2199 CONECT 2199 2198 CONECT 2200 2194 CONECT 2509 2514 CONECT 2514 2509 2515 CONECT 2515 2514 2516 2518 CONECT 2516 2515 2517 2522 CONECT 2517 2516 CONECT 2518 2515 2519 CONECT 2519 2518 2520 CONECT 2520 2519 2521 CONECT 2521 2520 CONECT 2522 2516 CONECT 2654 2660 CONECT 2660 2654 2661 CONECT 2661 2660 2662 2664 CONECT 2662 2661 2663 2668 CONECT 2663 2662 CONECT 2664 2661 2665 CONECT 2665 2664 2666 CONECT 2666 2665 2667 CONECT 2667 2666 CONECT 2668 2662 CONECT 2773 2777 CONECT 2777 2773 2778 CONECT 2778 2777 2779 2781 CONECT 2779 2778 2780 2785 CONECT 2780 2779 CONECT 2781 2778 2782 CONECT 2782 2781 2783 CONECT 2783 2782 2784 CONECT 2784 2783 CONECT 2785 2779 CONECT 3024 3033 CONECT 3033 3024 3034 CONECT 3034 3033 3035 3037 CONECT 3035 3034 3036 3041 CONECT 3036 3035 CONECT 3037 3034 3038 CONECT 3038 3037 3039 CONECT 3039 3038 3040 CONECT 3040 3039 CONECT 3041 3035 CONECT 3272 3278 CONECT 3278 3272 3279 CONECT 3279 3278 3280 3282 CONECT 3280 3279 3281 3286 CONECT 3281 3280 CONECT 3282 3279 3283 CONECT 3283 3282 3284 CONECT 3284 3283 3285 CONECT 3285 3284 CONECT 3286 3280 CONECT 3343 3344 3394 CONECT 3344 3343 3345 3388 CONECT 3345 3344 3389 CONECT 3346 3347 3395 CONECT 3347 3346 3387 CONECT 3348 3387 CONECT 3349 3387 CONECT 3350 3387 CONECT 3351 3352 3389 3390 CONECT 3352 3351 3353 CONECT 3353 3352 3354 CONECT 3354 3353 3355 CONECT 3355 3354 3356 CONECT 3356 3355 3357 CONECT 3357 3356 3358 CONECT 3358 3357 3359 CONECT 3359 3358 3360 CONECT 3360 3359 3361 CONECT 3361 3360 3362 CONECT 3362 3361 3363 CONECT 3363 3362 3364 CONECT 3364 3363 3365 CONECT 3365 3364 3366 CONECT 3366 3365 3367 CONECT 3367 3366 3368 CONECT 3368 3367 CONECT 3369 3370 3388 3391 CONECT 3370 3369 3371 CONECT 3371 3370 3372 CONECT 3372 3371 3373 CONECT 3373 3372 3374 CONECT 3374 3373 3375 CONECT 3375 3374 3376 CONECT 3376 3375 3377 CONECT 3377 3376 3378 CONECT 3378 3377 3379 CONECT 3379 3378 3380 CONECT 3380 3379 3381 CONECT 3381 3380 3382 CONECT 3382 3381 3383 CONECT 3383 3382 3384 CONECT 3384 3383 3385 CONECT 3385 3384 3386 CONECT 3386 3385 CONECT 3387 3347 3348 3349 3350 CONECT 3388 3344 3369 CONECT 3389 3345 3351 CONECT 3390 3351 CONECT 3391 3369 CONECT 3392 3396 CONECT 3393 3396 CONECT 3394 3343 3396 CONECT 3395 3346 3396 CONECT 3396 3392 3393 3394 3395 CONECT 3397 3398 3448 CONECT 3398 3397 3399 3442 CONECT 3399 3398 3443 CONECT 3400 3401 3449 CONECT 3401 3400 3441 CONECT 3402 3441 CONECT 3403 3441 CONECT 3404 3441 CONECT 3405 3406 3443 3444 CONECT 3406 3405 3407 CONECT 3407 3406 3408 CONECT 3408 3407 3409 CONECT 3409 3408 3410 CONECT 3410 3409 3411 CONECT 3411 3410 3412 CONECT 3412 3411 3413 CONECT 3413 3412 3414 CONECT 3414 3413 3415 CONECT 3415 3414 3416 CONECT 3416 3415 3417 CONECT 3417 3416 3418 CONECT 3418 3417 3419 CONECT 3419 3418 3420 CONECT 3420 3419 3421 CONECT 3421 3420 3422 CONECT 3422 3421 CONECT 3423 3424 3442 3445 CONECT 3424 3423 3425 CONECT 3425 3424 3426 CONECT 3426 3425 3427 CONECT 3427 3426 3428 CONECT 3428 3427 3429 CONECT 3429 3428 3430 CONECT 3430 3429 3431 CONECT 3431 3430 3432 CONECT 3432 3431 3433 CONECT 3433 3432 3434 CONECT 3434 3433 3435 CONECT 3435 3434 3436 CONECT 3436 3435 3437 CONECT 3437 3436 3438 CONECT 3438 3437 3439 CONECT 3439 3438 3440 CONECT 3440 3439 CONECT 3441 3401 3402 3403 3404 CONECT 3442 3398 3423 CONECT 3443 3399 3405 CONECT 3444 3405 CONECT 3445 3423 CONECT 3446 3450 CONECT 3447 3450 CONECT 3448 3397 3450 CONECT 3449 3400 3450 CONECT 3450 3446 3447 3448 3449 MASTER 384 0 14 12 34 0 12 6 3516 2 228 34 END