data_1LNG # _entry.id 1LNG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1LNG pdb_00001lng 10.2210/pdb1lng/pdb NDB PR0073 ? ? RCSB RCSB016105 ? ? WWPDB D_1000016105 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1LNG _pdbx_database_status.recvd_initial_deposition_date 2002-05-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hainzl, T.' 1 'Huang, S.' 2 'Sauer-Eriksson, A.E.' 3 # _citation.id primary _citation.title 'Structure of the SRP19 RNA complex and implications for signal recognition particle assembly.' _citation.journal_abbrev Nature _citation.journal_volume 417 _citation.page_first 767 _citation.page_last 771 _citation.year 2002 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12050674 _citation.pdbx_database_id_DOI 10.1038/nature00768 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hainzl, T.' 1 ? primary 'Huang, S.' 2 ? primary 'Sauer-Eriksson, A.E.' 3 ? # _cell.entry_id 1LNG _cell.length_a 42.521 _cell.length_b 61.405 _cell.length_c 155.978 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LNG _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '7S.S SRP RNA' 31428.740 1 ? ? ? ? 2 polymer man 'Signal recognition particle 19 kDa protein' 10376.414 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 4 water nat water 18.015 208 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name SRP19 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no ;UCGGCGGUGGGGGAGCAUCUCCUGUAGGGGAGAUGUAACCCCCUUUACCUGCCGAACCCCGCCAGGCCCGGAAGGGAGCA ACGGUAGGCAGGACGUC ; ;UCGGCGGUGGGGGAGCAUCUCCUGUAGGGGAGAUGUAACCCCCUUUACCUGCCGAACCCCGCCAGGCCCGGAAGGGAGCA ACGGUAGGCAGGACGUC ; B ? 2 'polypeptide(L)' no no ;MIIWPSYIDKKKSRREGRKVPEELAIEKPSLKDIEKALKKLGLEPKIYRDKRYPRQHWEICGCVEVDYKGNKLQLLKEIC KIIKGKN ; ;MIIWPSYIDKKKSRREGRKVPEELAIEKPSLKDIEKALKKLGLEPKIYRDKRYPRQHWEICGCVEVDYKGNKLQLLKEIC KIIKGKN ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 U n 1 2 C n 1 3 G n 1 4 G n 1 5 C n 1 6 G n 1 7 G n 1 8 U n 1 9 G n 1 10 G n 1 11 G n 1 12 G n 1 13 G n 1 14 A n 1 15 G n 1 16 C n 1 17 A n 1 18 U n 1 19 C n 1 20 U n 1 21 C n 1 22 C n 1 23 U n 1 24 G n 1 25 U n 1 26 A n 1 27 G n 1 28 G n 1 29 G n 1 30 G n 1 31 A n 1 32 G n 1 33 A n 1 34 U n 1 35 G n 1 36 U n 1 37 A n 1 38 A n 1 39 C n 1 40 C n 1 41 C n 1 42 C n 1 43 C n 1 44 U n 1 45 U n 1 46 U n 1 47 A n 1 48 C n 1 49 C n 1 50 U n 1 51 G n 1 52 C n 1 53 C n 1 54 G n 1 55 A n 1 56 A n 1 57 C n 1 58 C n 1 59 C n 1 60 C n 1 61 G n 1 62 C n 1 63 C n 1 64 A n 1 65 G n 1 66 G n 1 67 C n 1 68 C n 1 69 C n 1 70 G n 1 71 G n 1 72 A n 1 73 A n 1 74 G n 1 75 G n 1 76 G n 1 77 A n 1 78 G n 1 79 C n 1 80 A n 1 81 A n 1 82 C n 1 83 G n 1 84 G n 1 85 U n 1 86 A n 1 87 G n 1 88 G n 1 89 C n 1 90 A n 1 91 G n 1 92 G n 1 93 A n 1 94 C n 1 95 G n 1 96 U n 1 97 C n 2 1 MET n 2 2 ILE n 2 3 ILE n 2 4 TRP n 2 5 PRO n 2 6 SER n 2 7 TYR n 2 8 ILE n 2 9 ASP n 2 10 LYS n 2 11 LYS n 2 12 LYS n 2 13 SER n 2 14 ARG n 2 15 ARG n 2 16 GLU n 2 17 GLY n 2 18 ARG n 2 19 LYS n 2 20 VAL n 2 21 PRO n 2 22 GLU n 2 23 GLU n 2 24 LEU n 2 25 ALA n 2 26 ILE n 2 27 GLU n 2 28 LYS n 2 29 PRO n 2 30 SER n 2 31 LEU n 2 32 LYS n 2 33 ASP n 2 34 ILE n 2 35 GLU n 2 36 LYS n 2 37 ALA n 2 38 LEU n 2 39 LYS n 2 40 LYS n 2 41 LEU n 2 42 GLY n 2 43 LEU n 2 44 GLU n 2 45 PRO n 2 46 LYS n 2 47 ILE n 2 48 TYR n 2 49 ARG n 2 50 ASP n 2 51 LYS n 2 52 ARG n 2 53 TYR n 2 54 PRO n 2 55 ARG n 2 56 GLN n 2 57 HIS n 2 58 TRP n 2 59 GLU n 2 60 ILE n 2 61 CYS n 2 62 GLY n 2 63 CYS n 2 64 VAL n 2 65 GLU n 2 66 VAL n 2 67 ASP n 2 68 TYR n 2 69 LYS n 2 70 GLY n 2 71 ASN n 2 72 LYS n 2 73 LEU n 2 74 GLN n 2 75 LEU n 2 76 LEU n 2 77 LYS n 2 78 GLU n 2 79 ILE n 2 80 CYS n 2 81 LYS n 2 82 ILE n 2 83 ILE n 2 84 LYS n 2 85 GLY n 2 86 LYS n 2 87 ASN n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ? Methanocaldococcus ? ? ? ? ? ? ? 'Methanocaldococcus jannaschii' 2190 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 'in vitro transcription' 2 1 sample ? ? ? ? Methanocaldococcus ? ? ? ? ? ? ? 'Methanocaldococcus jannaschii' 2190 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP SRP19_METJA 2 ;MIIWPSYIDKKKSRREGRKVPEELAIEKPSLKDIEKALKKLGLEPKIYRDKRYPRQHWEICGCVEVDYKGNKLQLLKEIC KIIKGKN ; 1 Q58440 ? 2 PDB 1LNG 1 ? ? 1LNG ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1LNG A 1 ? 87 ? Q58440 1 ? 87 ? 1 87 2 2 1LNG B 1 ? 97 ? 1LNG 140 ? 236 ? 140 236 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1LNG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 49.49 _exptl_crystal.density_Matthews 2.44 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 273 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details 'PEG 3350, HEPES, MgAc, CaCl, DMSO, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 273K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 'PEG 3350' ? ? ? 1 2 1 HEPES ? ? ? 1 3 1 MgAc ? ? ? 1 4 1 CaCl ? ? ? 1 5 1 DMSO ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2001-09-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.12 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'MAX II BEAMLINE I711' _diffrn_source.pdbx_synchrotron_site 'MAX II' _diffrn_source.pdbx_synchrotron_beamline I711 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.12 # _reflns.entry_id 1LNG _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.3 _reflns.d_resolution_low 20.0 _reflns.number_all 18606 _reflns.number_obs 18606 _reflns.percent_possible_obs 98.1 _reflns.pdbx_Rmerge_I_obs 0.0990000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.3 _reflns_shell.d_res_low 2.38 _reflns_shell.percent_possible_all 91 _reflns_shell.Rmerge_I_obs 0.3320000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1LNG _refine.ls_number_reflns_obs 17651 _refine.ls_number_reflns_all 18606 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.3 _refine.ls_percent_reflns_obs 98.63 _refine.ls_R_factor_obs 0.2269700 _refine.ls_R_factor_all 0.2269700 _refine.ls_R_factor_R_work 0.2244400 _refine.ls_R_factor_R_free 0.2733300 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 955 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.927 _refine.correlation_coeff_Fo_to_Fc_free 0.893 _refine.B_iso_mean 38.347 _refine.aniso_B[1][1] -2.02 _refine.aniso_B[2][2] 2.18 _refine.aniso_B[3][3] -0.16 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB entries 1D4R and 1DUL' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.266 _refine.overall_SU_B 8.098 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML 0.198 _refine.pdbx_overall_ESU_R 0.389 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 727 _refine_hist.pdbx_number_atoms_nucleic_acid 2080 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 200 _refine_hist.number_atoms_total 3017 _refine_hist.d_res_high 2.3 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.021 ? 3075 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.704 2.788 ? 4628 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 3.917 3.000 ? 86 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 23.294 15.000 ? 174 'X-RAY DIFFRACTION' ? r_chiral_restr 0.090 0.200 ? 491 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1540 'X-RAY DIFFRACTION' ? r_nbd_refined 0.273 0.300 ? 1434 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.257 0.500 ? 307 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.245 0.300 ? 39 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.316 0.500 ? 11 'X-RAY DIFFRACTION' ? r_mcbond_it 0.826 1.500 ? 435 'X-RAY DIFFRACTION' ? r_mcangle_it 1.598 2.000 ? 705 'X-RAY DIFFRACTION' ? r_scbond_it 1.684 3.000 ? 2640 'X-RAY DIFFRACTION' ? r_scangle_it 2.539 4.500 ? 3923 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.3 _refine_ls_shell.d_res_low 2.359 _refine_ls_shell.number_reflns_R_work 1194 _refine_ls_shell.R_factor_R_work 0.2450000 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3050000 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 68 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 1LNG _struct.title 'Crystal Structure of the SRP19-7S.S SRP RNA Complex of M. jannaschii' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1LNG _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN/RNA' _struct_keywords.text 'Protein-RNA complex, SIGNALING PROTEIN-RNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TRP B 4 ? ILE B 8 ? TRP A 4 ILE A 8 5 ? 5 HELX_P HELX_P2 2 SER B 30 ? LEU B 41 ? SER A 30 LEU A 41 1 ? 12 HELX_P HELX_P3 3 TYR B 53 ? HIS B 57 ? TYR A 53 HIS A 57 5 ? 5 HELX_P HELX_P4 4 ASN B 71 ? LYS B 84 ? ASN A 71 LYS A 84 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 65 OP2 ? ? ? 1_555 C MG . MG ? ? B G 204 B MG 401 1_555 ? ? ? ? ? ? ? 2.398 ? ? metalc2 metalc ? ? A G 70 N7 ? ? ? 1_555 D MG . MG ? ? B G 209 B MG 402 1_555 ? ? ? ? ? ? ? 3.058 ? ? metalc3 metalc ? ? A A 72 OP2 ? ? ? 1_555 D MG . MG ? ? B A 211 B MG 402 1_555 ? ? ? ? ? ? ? 2.787 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? B MG 401 B HOH 544 1_555 ? ? ? ? ? ? ? 2.033 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? B MG 401 B HOH 545 1_555 ? ? ? ? ? ? ? 1.942 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? B MG 401 B HOH 546 1_555 ? ? ? ? ? ? ? 2.018 ? ? metalc7 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? B MG 401 B HOH 547 1_555 ? ? ? ? ? ? ? 2.055 ? ? metalc8 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? B MG 401 B HOH 548 1_555 ? ? ? ? ? ? ? 2.033 ? ? metalc9 metalc ? ? D MG . MG ? ? ? 1_555 E HOH . O ? ? B MG 402 B HOH 549 1_555 ? ? ? ? ? ? ? 2.206 ? ? metalc10 metalc ? ? D MG . MG ? ? ? 1_555 E HOH . O ? ? B MG 402 B HOH 550 1_555 ? ? ? ? ? ? ? 2.178 ? ? metalc11 metalc ? ? D MG . MG ? ? ? 1_555 E HOH . O ? ? B MG 402 B HOH 551 1_555 ? ? ? ? ? ? ? 2.189 ? ? hydrog1 hydrog ? ? A G 3 N1 ? ? ? 1_555 A C 97 N3 ? ? B G 142 B C 236 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 3 N2 ? ? ? 1_555 A C 97 O2 ? ? B G 142 B C 236 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 3 O6 ? ? ? 1_555 A C 97 N4 ? ? B G 142 B C 236 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 4 N1 ? ? ? 1_555 A U 96 O2 ? ? B G 143 B U 235 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog5 hydrog ? ? A G 4 O6 ? ? ? 1_555 A U 96 N3 ? ? B G 143 B U 235 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog6 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 95 N1 ? ? B C 144 B G 234 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 95 O6 ? ? B C 144 B G 234 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 95 N2 ? ? B C 144 B G 234 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 6 O6 ? ? ? 1_555 A C 94 N4 ? ? B G 145 B C 233 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog10 hydrog ? ? A G 9 N1 ? ? ? 1_555 A C 43 N3 ? ? B G 148 B C 182 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 9 N2 ? ? ? 1_555 A C 43 O2 ? ? B G 148 B C 182 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 9 O6 ? ? ? 1_555 A C 43 N4 ? ? B G 148 B C 182 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 10 N1 ? ? ? 1_555 A C 42 N3 ? ? B G 149 B C 181 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 10 N2 ? ? ? 1_555 A C 42 O2 ? ? B G 149 B C 181 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 10 O6 ? ? ? 1_555 A C 42 N4 ? ? B G 149 B C 181 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 11 N1 ? ? ? 1_555 A C 41 N3 ? ? B G 150 B C 180 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 11 N2 ? ? ? 1_555 A C 41 O2 ? ? B G 150 B C 180 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 11 O6 ? ? ? 1_555 A C 41 N4 ? ? B G 150 B C 180 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 12 N1 ? ? ? 1_555 A C 40 N3 ? ? B G 151 B C 179 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 12 N2 ? ? ? 1_555 A C 40 O2 ? ? B G 151 B C 179 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 12 O6 ? ? ? 1_555 A C 40 N4 ? ? B G 151 B C 179 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 13 N1 ? ? ? 1_555 A C 39 N3 ? ? B G 152 B C 178 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 13 N2 ? ? ? 1_555 A C 39 O2 ? ? B G 152 B C 178 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 13 O6 ? ? ? 1_555 A C 39 N4 ? ? B G 152 B C 178 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 15 N1 ? ? ? 1_555 A U 36 O2 ? ? B G 154 B U 175 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog26 hydrog ? ? A G 15 O6 ? ? ? 1_555 A U 36 N3 ? ? B G 154 B U 175 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog27 hydrog ? ? A C 16 N3 ? ? ? 1_555 A G 35 N1 ? ? B C 155 B G 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 16 N4 ? ? ? 1_555 A G 35 O6 ? ? B C 155 B G 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 16 O2 ? ? ? 1_555 A G 35 N2 ? ? B C 155 B G 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A A 17 N1 ? ? ? 1_555 A U 34 N3 ? ? B A 156 B U 173 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A A 17 N6 ? ? ? 1_555 A U 34 O4 ? ? B A 156 B U 173 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A U 18 N3 ? ? ? 1_555 A A 33 N1 ? ? B U 157 B A 172 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A U 18 O4 ? ? ? 1_555 A A 33 N6 ? ? B U 157 B A 172 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A C 19 N3 ? ? ? 1_555 A G 32 N1 ? ? B C 158 B G 171 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A C 19 N4 ? ? ? 1_555 A G 32 O6 ? ? B C 158 B G 171 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A C 19 O2 ? ? ? 1_555 A G 32 N2 ? ? B C 158 B G 171 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A U 20 N3 ? ? ? 1_555 A A 31 N1 ? ? B U 159 B A 170 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A U 20 O4 ? ? ? 1_555 A A 31 N6 ? ? B U 159 B A 170 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 21 N3 ? ? ? 1_555 A G 30 N1 ? ? B C 160 B G 169 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A C 21 N4 ? ? ? 1_555 A G 30 O6 ? ? B C 160 B G 169 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A C 21 O2 ? ? ? 1_555 A G 30 N2 ? ? B C 160 B G 169 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 22 N3 ? ? ? 1_555 A G 29 N1 ? ? B C 161 B G 168 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 22 N4 ? ? ? 1_555 A G 29 O6 ? ? B C 161 B G 168 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A C 22 O2 ? ? ? 1_555 A G 29 N2 ? ? B C 161 B G 168 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A U 23 N3 ? ? ? 1_555 A G 28 O6 ? ? B U 162 B G 167 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog46 hydrog ? ? A U 23 O2 ? ? ? 1_555 A G 28 N1 ? ? B U 162 B G 167 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog47 hydrog ? ? A G 24 N2 ? ? ? 1_555 A G 27 N7 ? ? B G 163 B G 166 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog48 hydrog ? ? A A 26 N1 ? ? ? 1_555 A A 73 N6 ? ? B A 165 B A 212 1_555 ? ? ? ? ? ? TYPE_1_PAIR ? ? ? hydrog49 hydrog ? ? A A 26 N6 ? ? ? 1_555 A A 73 N1 ? ? B A 165 B A 212 1_555 ? ? ? ? ? ? TYPE_1_PAIR ? ? ? hydrog50 hydrog ? ? A A 26 N1 ? ? ? 1_555 A G 74 N2 ? ? B A 165 B G 213 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog51 hydrog ? ? A G 27 N2 ? ? ? 1_555 A G 74 N3 ? ? B G 166 B G 213 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog52 hydrog ? ? A G 27 N3 ? ? ? 1_555 A G 74 N2 ? ? B G 166 B G 213 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog53 hydrog ? ? A A 38 N3 ? ? ? 1_555 A G 84 N2 ? ? B A 177 B G 223 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog54 hydrog ? ? A C 48 N3 ? ? ? 1_555 A G 92 N1 ? ? B C 187 B G 231 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A C 48 N4 ? ? ? 1_555 A G 92 O6 ? ? B C 187 B G 231 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A C 48 O2 ? ? ? 1_555 A G 92 N2 ? ? B C 187 B G 231 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A C 49 N4 ? ? ? 1_555 A G 91 O6 ? ? B C 188 B G 230 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog58 hydrog ? ? A U 50 N3 ? ? ? 1_555 A A 90 N1 ? ? B U 189 B A 229 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog59 hydrog ? ? A G 51 N1 ? ? ? 1_555 A C 89 N3 ? ? B G 190 B C 228 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A G 51 N2 ? ? ? 1_555 A C 89 O2 ? ? B G 190 B C 228 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A G 51 O6 ? ? ? 1_555 A C 89 N4 ? ? B G 190 B C 228 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A C 52 O2 ? ? ? 1_555 A G 88 N2 ? ? B C 191 B G 227 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog63 hydrog ? ? A C 53 N3 ? ? ? 1_555 A G 87 N1 ? ? B C 192 B G 226 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A C 53 N4 ? ? ? 1_555 A G 87 O6 ? ? B C 192 B G 226 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A C 53 O2 ? ? ? 1_555 A G 87 N2 ? ? B C 192 B G 226 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A G 54 N2 ? ? ? 1_555 A A 86 N7 ? ? B G 193 B A 225 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog67 hydrog ? ? A G 54 N3 ? ? ? 1_555 A A 86 N6 ? ? B G 193 B A 225 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog68 hydrog ? ? A A 55 N6 ? ? ? 1_555 A U 85 O2 ? ? B A 194 B U 224 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog69 hydrog ? ? A A 55 N7 ? ? ? 1_555 A U 85 N3 ? ? B A 194 B U 224 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog70 hydrog ? ? A C 59 N3 ? ? ? 1_555 A G 84 N1 ? ? B C 198 B G 223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A C 59 N4 ? ? ? 1_555 A G 84 O6 ? ? B C 198 B G 223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A C 59 O2 ? ? ? 1_555 A G 84 N2 ? ? B C 198 B G 223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A C 60 N3 ? ? ? 1_555 A G 83 N1 ? ? B C 199 B G 222 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A C 60 N4 ? ? ? 1_555 A G 83 O6 ? ? B C 199 B G 222 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A C 60 O2 ? ? ? 1_555 A G 83 N2 ? ? B C 199 B G 222 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A G 61 N1 ? ? ? 1_555 A C 82 N3 ? ? B G 200 B C 221 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A G 61 N2 ? ? ? 1_555 A C 82 O2 ? ? B G 200 B C 221 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A G 61 O6 ? ? ? 1_555 A C 82 N4 ? ? B G 200 B C 221 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A C 62 O2 ? ? ? 1_555 A A 81 N6 ? ? B C 201 B A 220 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog80 hydrog ? ? A C 63 O2 ? ? ? 1_555 A C 79 N4 ? ? B C 202 B C 218 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog81 hydrog ? ? A C 63 O2 ? ? ? 1_555 A A 80 N6 ? ? B C 202 B A 219 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog82 hydrog ? ? A A 64 N6 ? ? ? 1_555 A C 79 N3 ? ? B A 203 B C 218 1_555 ? ? ? ? ? ? TYPE_25_PAIR ? ? ? hydrog83 hydrog ? ? A A 64 N7 ? ? ? 1_555 A C 79 N4 ? ? B A 203 B C 218 1_555 ? ? ? ? ? ? TYPE_25_PAIR ? ? ? hydrog84 hydrog ? ? A G 65 O6 ? ? ? 1_555 A G 78 N2 ? ? B G 204 B G 217 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog85 hydrog ? ? A G 66 N1 ? ? ? 1_555 A A 77 N1 ? ? B G 205 B A 216 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog86 hydrog ? ? A G 66 O6 ? ? ? 1_555 A A 77 N6 ? ? B G 205 B A 216 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog87 hydrog ? ? A C 67 N3 ? ? ? 1_555 A G 76 N1 ? ? B C 206 B G 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A C 67 N4 ? ? ? 1_555 A G 76 O6 ? ? B C 206 B G 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A C 67 O2 ? ? ? 1_555 A G 76 N2 ? ? B C 206 B G 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? A C 68 N3 ? ? ? 1_555 A G 75 N1 ? ? B C 207 B G 214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? A C 68 N4 ? ? ? 1_555 A G 75 O6 ? ? B C 207 B G 214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? A C 68 O2 ? ? ? 1_555 A G 75 N2 ? ? B C 207 B G 214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? A C 69 N3 ? ? ? 1_555 A G 74 N1 ? ? B C 208 B G 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? A C 69 N4 ? ? ? 1_555 A G 74 O6 ? ? B C 208 B G 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? A C 69 O2 ? ? ? 1_555 A G 74 N2 ? ? B C 208 B G 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? A G 70 N2 ? ? ? 1_555 A A 73 N7 ? ? B G 209 B A 212 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog97 hydrog ? ? A G 70 N3 ? ? ? 1_555 A A 73 N6 ? ? B G 209 B A 212 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE B 2 ? ILE B 3 ? ILE A 2 ILE A 3 A 2 CYS B 63 ? GLU B 65 ? CYS A 63 GLU A 65 A 3 LYS B 46 ? TYR B 48 ? LYS A 46 TYR A 48 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE B 3 ? N ILE A 3 O VAL B 64 ? O VAL A 64 A 2 3 O CYS B 63 ? O CYS A 63 N TYR B 48 ? N TYR A 48 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B MG 401 ? 6 'BINDING SITE FOR RESIDUE MG B 401' AC2 Software B MG 402 ? 5 'BINDING SITE FOR RESIDUE MG B 402' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 G A 65 ? G B 204 . ? 1_555 ? 2 AC1 6 HOH E . ? HOH B 544 . ? 1_555 ? 3 AC1 6 HOH E . ? HOH B 545 . ? 1_555 ? 4 AC1 6 HOH E . ? HOH B 546 . ? 1_555 ? 5 AC1 6 HOH E . ? HOH B 547 . ? 1_555 ? 6 AC1 6 HOH E . ? HOH B 548 . ? 1_555 ? 7 AC2 5 G A 70 ? G B 209 . ? 1_555 ? 8 AC2 5 A A 72 ? A B 211 . ? 1_555 ? 9 AC2 5 HOH E . ? HOH B 549 . ? 1_555 ? 10 AC2 5 HOH E . ? HOH B 550 . ? 1_555 ? 11 AC2 5 HOH E . ? HOH B 551 . ? 1_555 ? # _database_PDB_matrix.entry_id 1LNG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1LNG _atom_sites.fract_transf_matrix[1][1] 0.023518 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016285 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006411 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 U 1 140 140 U U B . n A 1 2 C 2 141 141 C C B . n A 1 3 G 3 142 142 G G B . n A 1 4 G 4 143 143 G G B . n A 1 5 C 5 144 144 C C B . n A 1 6 G 6 145 145 G G B . n A 1 7 G 7 146 146 G G B . n A 1 8 U 8 147 147 U U B . n A 1 9 G 9 148 148 G G B . n A 1 10 G 10 149 149 G G B . n A 1 11 G 11 150 150 G G B . n A 1 12 G 12 151 151 G G B . n A 1 13 G 13 152 152 G G B . n A 1 14 A 14 153 153 A A B . n A 1 15 G 15 154 154 G G B . n A 1 16 C 16 155 155 C C B . n A 1 17 A 17 156 156 A A B . n A 1 18 U 18 157 157 U U B . n A 1 19 C 19 158 158 C C B . n A 1 20 U 20 159 159 U U B . n A 1 21 C 21 160 160 C C B . n A 1 22 C 22 161 161 C C B . n A 1 23 U 23 162 162 U U B . n A 1 24 G 24 163 163 G G B . n A 1 25 U 25 164 164 U U B . n A 1 26 A 26 165 165 A A B . n A 1 27 G 27 166 166 G G B . n A 1 28 G 28 167 167 G G B . n A 1 29 G 29 168 168 G G B . n A 1 30 G 30 169 169 G G B . n A 1 31 A 31 170 170 A A B . n A 1 32 G 32 171 171 G G B . n A 1 33 A 33 172 172 A A B . n A 1 34 U 34 173 173 U U B . n A 1 35 G 35 174 174 G G B . n A 1 36 U 36 175 175 U U B . n A 1 37 A 37 176 176 A A B . n A 1 38 A 38 177 177 A A B . n A 1 39 C 39 178 178 C C B . n A 1 40 C 40 179 179 C C B . n A 1 41 C 41 180 180 C C B . n A 1 42 C 42 181 181 C C B . n A 1 43 C 43 182 182 C C B . n A 1 44 U 44 183 183 U U B . n A 1 45 U 45 184 184 U U B . n A 1 46 U 46 185 185 U U B . n A 1 47 A 47 186 186 A A B . n A 1 48 C 48 187 187 C C B . n A 1 49 C 49 188 188 C C B . n A 1 50 U 50 189 189 U U B . n A 1 51 G 51 190 190 G G B . n A 1 52 C 52 191 191 C C B . n A 1 53 C 53 192 192 C C B . n A 1 54 G 54 193 193 G G B . n A 1 55 A 55 194 194 A A B . n A 1 56 A 56 195 195 A A B . n A 1 57 C 57 196 196 C C B . n A 1 58 C 58 197 197 C C B . n A 1 59 C 59 198 198 C C B . n A 1 60 C 60 199 199 C C B . n A 1 61 G 61 200 200 G G B . n A 1 62 C 62 201 201 C C B . n A 1 63 C 63 202 202 C C B . n A 1 64 A 64 203 203 A A B . n A 1 65 G 65 204 204 G G B . n A 1 66 G 66 205 205 G G B . n A 1 67 C 67 206 206 C C B . n A 1 68 C 68 207 207 C C B . n A 1 69 C 69 208 208 C C B . n A 1 70 G 70 209 209 G G B . n A 1 71 G 71 210 210 G G B . n A 1 72 A 72 211 211 A A B . n A 1 73 A 73 212 212 A A B . n A 1 74 G 74 213 213 G G B . n A 1 75 G 75 214 214 G G B . n A 1 76 G 76 215 215 G G B . n A 1 77 A 77 216 216 A A B . n A 1 78 G 78 217 217 G G B . n A 1 79 C 79 218 218 C C B . n A 1 80 A 80 219 219 A A B . n A 1 81 A 81 220 220 A A B . n A 1 82 C 82 221 221 C C B . n A 1 83 G 83 222 222 G G B . n A 1 84 G 84 223 223 G G B . n A 1 85 U 85 224 224 U U B . n A 1 86 A 86 225 225 A A B . n A 1 87 G 87 226 226 G G B . n A 1 88 G 88 227 227 G G B . n A 1 89 C 89 228 228 C C B . n A 1 90 A 90 229 229 A A B . n A 1 91 G 91 230 230 G G B . n A 1 92 G 92 231 231 G G B . n A 1 93 A 93 232 232 A A B . n A 1 94 C 94 233 233 C C B . n A 1 95 G 95 234 234 G G B . n A 1 96 U 96 235 235 U U B . n A 1 97 C 97 236 236 C C B . n B 2 1 MET 1 1 1 MET MET A . n B 2 2 ILE 2 2 2 ILE ILE A . n B 2 3 ILE 3 3 3 ILE ILE A . n B 2 4 TRP 4 4 4 TRP TRP A . n B 2 5 PRO 5 5 5 PRO PRO A . n B 2 6 SER 6 6 6 SER SER A . n B 2 7 TYR 7 7 7 TYR TYR A . n B 2 8 ILE 8 8 8 ILE ILE A . n B 2 9 ASP 9 9 9 ASP ASP A . n B 2 10 LYS 10 10 10 LYS LYS A . n B 2 11 LYS 11 11 11 LYS LYS A . n B 2 12 LYS 12 12 12 LYS LYS A . n B 2 13 SER 13 13 13 SER SER A . n B 2 14 ARG 14 14 14 ARG ARG A . n B 2 15 ARG 15 15 15 ARG ARG A . n B 2 16 GLU 16 16 16 GLU GLU A . n B 2 17 GLY 17 17 17 GLY GLY A . n B 2 18 ARG 18 18 18 ARG ARG A . n B 2 19 LYS 19 19 19 LYS LYS A . n B 2 20 VAL 20 20 20 VAL VAL A . n B 2 21 PRO 21 21 21 PRO PRO A . n B 2 22 GLU 22 22 22 GLU GLU A . n B 2 23 GLU 23 23 23 GLU GLU A . n B 2 24 LEU 24 24 24 LEU LEU A . n B 2 25 ALA 25 25 25 ALA ALA A . n B 2 26 ILE 26 26 26 ILE ILE A . n B 2 27 GLU 27 27 27 GLU GLU A . n B 2 28 LYS 28 28 28 LYS LYS A . n B 2 29 PRO 29 29 29 PRO PRO A . n B 2 30 SER 30 30 30 SER SER A . n B 2 31 LEU 31 31 31 LEU LEU A . n B 2 32 LYS 32 32 32 LYS LYS A . n B 2 33 ASP 33 33 33 ASP ASP A . n B 2 34 ILE 34 34 34 ILE ILE A . n B 2 35 GLU 35 35 35 GLU GLU A . n B 2 36 LYS 36 36 36 LYS LYS A . n B 2 37 ALA 37 37 37 ALA ALA A . n B 2 38 LEU 38 38 38 LEU LEU A . n B 2 39 LYS 39 39 39 LYS LYS A . n B 2 40 LYS 40 40 40 LYS LYS A . n B 2 41 LEU 41 41 41 LEU LEU A . n B 2 42 GLY 42 42 42 GLY GLY A . n B 2 43 LEU 43 43 43 LEU LEU A . n B 2 44 GLU 44 44 44 GLU GLU A . n B 2 45 PRO 45 45 45 PRO PRO A . n B 2 46 LYS 46 46 46 LYS LYS A . n B 2 47 ILE 47 47 47 ILE ILE A . n B 2 48 TYR 48 48 48 TYR TYR A . n B 2 49 ARG 49 49 49 ARG ARG A . n B 2 50 ASP 50 50 50 ASP ASP A . n B 2 51 LYS 51 51 51 LYS LYS A . n B 2 52 ARG 52 52 52 ARG ARG A . n B 2 53 TYR 53 53 53 TYR TYR A . n B 2 54 PRO 54 54 54 PRO PRO A . n B 2 55 ARG 55 55 55 ARG ARG A . n B 2 56 GLN 56 56 56 GLN GLN A . n B 2 57 HIS 57 57 57 HIS HIS A . n B 2 58 TRP 58 58 58 TRP TRP A . n B 2 59 GLU 59 59 59 GLU GLU A . n B 2 60 ILE 60 60 60 ILE ILE A . n B 2 61 CYS 61 61 61 CYS CYS A . n B 2 62 GLY 62 62 62 GLY GLY A . n B 2 63 CYS 63 63 63 CYS CYS A . n B 2 64 VAL 64 64 64 VAL VAL A . n B 2 65 GLU 65 65 65 GLU GLU A . n B 2 66 VAL 66 66 66 VAL VAL A . n B 2 67 ASP 67 67 67 ASP ASP A . n B 2 68 TYR 68 68 68 TYR TYR A . n B 2 69 LYS 69 69 69 LYS LYS A . n B 2 70 GLY 70 70 70 GLY GLY A . n B 2 71 ASN 71 71 71 ASN ASN A . n B 2 72 LYS 72 72 72 LYS LYS A . n B 2 73 LEU 73 73 73 LEU LEU A . n B 2 74 GLN 74 74 74 GLN GLN A . n B 2 75 LEU 75 75 75 LEU LEU A . n B 2 76 LEU 76 76 76 LEU LEU A . n B 2 77 LYS 77 77 77 LYS LYS A . n B 2 78 GLU 78 78 78 GLU GLU A . n B 2 79 ILE 79 79 79 ILE ILE A . n B 2 80 CYS 80 80 80 CYS CYS A . n B 2 81 LYS 81 81 81 LYS LYS A . n B 2 82 ILE 82 82 82 ILE ILE A . n B 2 83 ILE 83 83 83 ILE ILE A . n B 2 84 LYS 84 84 84 LYS LYS A . n B 2 85 GLY 85 85 85 GLY GLY A . n B 2 86 LYS 86 86 86 LYS LYS A . n B 2 87 ASN 87 87 87 ASN ASN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG 1 401 1 MG MO5 B . D 3 MG 1 402 2 MG MO3 B . E 4 HOH 1 403 300 HOH HOH B . E 4 HOH 2 404 301 HOH HOH B . E 4 HOH 3 405 302 HOH HOH B . E 4 HOH 4 406 303 HOH HOH B . E 4 HOH 5 407 304 HOH HOH B . E 4 HOH 6 408 1 HOH HOH B . E 4 HOH 7 409 2 HOH HOH B . E 4 HOH 8 410 3 HOH HOH B . E 4 HOH 9 411 4 HOH HOH B . E 4 HOH 10 412 5 HOH HOH B . E 4 HOH 11 413 6 HOH HOH B . E 4 HOH 12 414 7 HOH HOH B . E 4 HOH 13 415 11 HOH HOH B . E 4 HOH 14 416 12 HOH HOH B . E 4 HOH 15 417 14 HOH HOH B . E 4 HOH 16 418 15 HOH HOH B . E 4 HOH 17 419 16 HOH HOH B . E 4 HOH 18 420 17 HOH HOH B . E 4 HOH 19 421 20 HOH HOH B . E 4 HOH 20 422 21 HOH HOH B . E 4 HOH 21 423 22 HOH HOH B . E 4 HOH 22 424 23 HOH HOH B . E 4 HOH 23 425 27 HOH HOH B . E 4 HOH 24 426 28 HOH HOH B . E 4 HOH 25 427 29 HOH HOH B . E 4 HOH 26 428 32 HOH HOH B . E 4 HOH 27 429 33 HOH HOH B . E 4 HOH 28 430 34 HOH HOH B . E 4 HOH 29 431 35 HOH HOH B . E 4 HOH 30 432 36 HOH HOH B . E 4 HOH 31 433 37 HOH HOH B . E 4 HOH 32 434 40 HOH HOH B . E 4 HOH 33 435 41 HOH HOH B . E 4 HOH 34 436 44 HOH HOH B . E 4 HOH 35 437 45 HOH HOH B . E 4 HOH 36 438 47 HOH HOH B . E 4 HOH 37 439 48 HOH HOH B . E 4 HOH 38 440 49 HOH HOH B . E 4 HOH 39 441 50 HOH HOH B . E 4 HOH 40 442 51 HOH HOH B . E 4 HOH 41 443 54 HOH HOH B . E 4 HOH 42 444 55 HOH HOH B . E 4 HOH 43 445 56 HOH HOH B . E 4 HOH 44 446 57 HOH HOH B . E 4 HOH 45 447 59 HOH HOH B . E 4 HOH 46 448 62 HOH HOH B . E 4 HOH 47 449 67 HOH HOH B . E 4 HOH 48 450 69 HOH HOH B . E 4 HOH 49 451 70 HOH HOH B . E 4 HOH 50 452 71 HOH HOH B . E 4 HOH 51 453 72 HOH HOH B . E 4 HOH 52 454 74 HOH HOH B . E 4 HOH 53 455 75 HOH HOH B . E 4 HOH 54 456 77 HOH HOH B . E 4 HOH 55 457 78 HOH HOH B . E 4 HOH 56 458 79 HOH HOH B . E 4 HOH 57 459 80 HOH HOH B . E 4 HOH 58 460 81 HOH HOH B . E 4 HOH 59 461 82 HOH HOH B . E 4 HOH 60 462 83 HOH HOH B . E 4 HOH 61 463 84 HOH HOH B . E 4 HOH 62 464 86 HOH HOH B . E 4 HOH 63 465 87 HOH HOH B . E 4 HOH 64 466 88 HOH HOH B . E 4 HOH 65 467 90 HOH HOH B . E 4 HOH 66 468 91 HOH HOH B . E 4 HOH 67 469 92 HOH HOH B . E 4 HOH 68 470 93 HOH HOH B . E 4 HOH 69 471 94 HOH HOH B . E 4 HOH 70 472 95 HOH HOH B . E 4 HOH 71 473 96 HOH HOH B . E 4 HOH 72 474 97 HOH HOH B . E 4 HOH 73 475 98 HOH HOH B . E 4 HOH 74 476 100 HOH HOH B . E 4 HOH 75 477 101 HOH HOH B . E 4 HOH 76 478 103 HOH HOH B . E 4 HOH 77 479 104 HOH HOH B . E 4 HOH 78 480 106 HOH HOH B . E 4 HOH 79 481 107 HOH HOH B . E 4 HOH 80 482 108 HOH HOH B . E 4 HOH 81 483 111 HOH HOH B . E 4 HOH 82 484 112 HOH HOH B . E 4 HOH 83 485 113 HOH HOH B . E 4 HOH 84 486 114 HOH HOH B . E 4 HOH 85 487 115 HOH HOH B . E 4 HOH 86 488 116 HOH HOH B . E 4 HOH 87 489 117 HOH HOH B . E 4 HOH 88 490 118 HOH HOH B . E 4 HOH 89 491 119 HOH HOH B . E 4 HOH 90 492 120 HOH HOH B . E 4 HOH 91 493 121 HOH HOH B . E 4 HOH 92 494 122 HOH HOH B . E 4 HOH 93 495 123 HOH HOH B . E 4 HOH 94 496 125 HOH HOH B . E 4 HOH 95 497 126 HOH HOH B . E 4 HOH 96 498 127 HOH HOH B . E 4 HOH 97 499 130 HOH HOH B . E 4 HOH 98 500 131 HOH HOH B . E 4 HOH 99 501 133 HOH HOH B . E 4 HOH 100 502 134 HOH HOH B . E 4 HOH 101 503 135 HOH HOH B . E 4 HOH 102 504 136 HOH HOH B . E 4 HOH 103 505 137 HOH HOH B . E 4 HOH 104 506 138 HOH HOH B . E 4 HOH 105 507 140 HOH HOH B . E 4 HOH 106 508 141 HOH HOH B . E 4 HOH 107 509 142 HOH HOH B . E 4 HOH 108 510 143 HOH HOH B . E 4 HOH 109 511 144 HOH HOH B . E 4 HOH 110 512 145 HOH HOH B . E 4 HOH 111 513 148 HOH HOH B . E 4 HOH 112 514 149 HOH HOH B . E 4 HOH 113 515 150 HOH HOH B . E 4 HOH 114 516 151 HOH HOH B . E 4 HOH 115 517 153 HOH HOH B . E 4 HOH 116 518 155 HOH HOH B . E 4 HOH 117 519 156 HOH HOH B . E 4 HOH 118 520 157 HOH HOH B . E 4 HOH 119 521 161 HOH HOH B . E 4 HOH 120 522 162 HOH HOH B . E 4 HOH 121 523 166 HOH HOH B . E 4 HOH 122 524 167 HOH HOH B . E 4 HOH 123 525 168 HOH HOH B . E 4 HOH 124 526 170 HOH HOH B . E 4 HOH 125 527 173 HOH HOH B . E 4 HOH 126 528 174 HOH HOH B . E 4 HOH 127 529 177 HOH HOH B . E 4 HOH 128 530 179 HOH HOH B . E 4 HOH 129 531 183 HOH HOH B . E 4 HOH 130 532 184 HOH HOH B . E 4 HOH 131 533 185 HOH HOH B . E 4 HOH 132 534 187 HOH HOH B . E 4 HOH 133 535 188 HOH HOH B . E 4 HOH 134 536 189 HOH HOH B . E 4 HOH 135 537 191 HOH HOH B . E 4 HOH 136 538 192 HOH HOH B . E 4 HOH 137 539 193 HOH HOH B . E 4 HOH 138 540 194 HOH HOH B . E 4 HOH 139 541 195 HOH HOH B . E 4 HOH 140 542 196 HOH HOH B . E 4 HOH 141 543 198 HOH HOH B . E 4 HOH 142 544 1 HOH MO5 B . E 4 HOH 143 545 1 HOH MO5 B . E 4 HOH 144 546 1 HOH MO5 B . E 4 HOH 145 547 1 HOH MO5 B . E 4 HOH 146 548 1 HOH MO5 B . E 4 HOH 147 549 2 HOH MO3 B . E 4 HOH 148 550 2 HOH MO3 B . E 4 HOH 149 551 2 HOH MO3 B . F 4 HOH 1 88 8 HOH HOH A . F 4 HOH 2 89 9 HOH HOH A . F 4 HOH 3 90 10 HOH HOH A . F 4 HOH 4 91 13 HOH HOH A . F 4 HOH 5 92 18 HOH HOH A . F 4 HOH 6 93 19 HOH HOH A . F 4 HOH 7 94 24 HOH HOH A . F 4 HOH 8 95 25 HOH HOH A . F 4 HOH 9 96 26 HOH HOH A . F 4 HOH 10 97 30 HOH HOH A . F 4 HOH 11 98 31 HOH HOH A . F 4 HOH 12 99 38 HOH HOH A . F 4 HOH 13 100 39 HOH HOH A . F 4 HOH 14 101 42 HOH HOH A . F 4 HOH 15 102 43 HOH HOH A . F 4 HOH 16 103 46 HOH HOH A . F 4 HOH 17 104 52 HOH HOH A . F 4 HOH 18 105 53 HOH HOH A . F 4 HOH 19 106 58 HOH HOH A . F 4 HOH 20 107 60 HOH HOH A . F 4 HOH 21 108 61 HOH HOH A . F 4 HOH 22 109 63 HOH HOH A . F 4 HOH 23 110 64 HOH HOH A . F 4 HOH 24 111 65 HOH HOH A . F 4 HOH 25 112 66 HOH HOH A . F 4 HOH 26 113 68 HOH HOH A . F 4 HOH 27 114 76 HOH HOH A . F 4 HOH 28 115 85 HOH HOH A . F 4 HOH 29 116 89 HOH HOH A . F 4 HOH 30 117 99 HOH HOH A . F 4 HOH 31 118 102 HOH HOH A . F 4 HOH 32 119 105 HOH HOH A . F 4 HOH 33 120 109 HOH HOH A . F 4 HOH 34 121 110 HOH HOH A . F 4 HOH 35 122 124 HOH HOH A . F 4 HOH 36 123 128 HOH HOH A . F 4 HOH 37 124 129 HOH HOH A . F 4 HOH 38 125 132 HOH HOH A . F 4 HOH 39 126 139 HOH HOH A . F 4 HOH 40 127 147 HOH HOH A . F 4 HOH 41 128 152 HOH HOH A . F 4 HOH 42 129 158 HOH HOH A . F 4 HOH 43 130 159 HOH HOH A . F 4 HOH 44 131 160 HOH HOH A . F 4 HOH 45 132 163 HOH HOH A . F 4 HOH 46 133 164 HOH HOH A . F 4 HOH 47 134 165 HOH HOH A . F 4 HOH 48 135 169 HOH HOH A . F 4 HOH 49 136 171 HOH HOH A . F 4 HOH 50 137 172 HOH HOH A . F 4 HOH 51 138 175 HOH HOH A . F 4 HOH 52 139 176 HOH HOH A . F 4 HOH 53 140 178 HOH HOH A . F 4 HOH 54 141 180 HOH HOH A . F 4 HOH 55 142 181 HOH HOH A . F 4 HOH 56 143 182 HOH HOH A . F 4 HOH 57 144 186 HOH HOH A . F 4 HOH 58 145 190 HOH HOH A . F 4 HOH 59 146 197 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP2 ? A G 65 ? B G 204 ? 1_555 MG ? C MG . ? B MG 401 ? 1_555 O ? E HOH . ? B HOH 544 ? 1_555 74.2 ? 2 OP2 ? A G 65 ? B G 204 ? 1_555 MG ? C MG . ? B MG 401 ? 1_555 O ? E HOH . ? B HOH 545 ? 1_555 158.8 ? 3 O ? E HOH . ? B HOH 544 ? 1_555 MG ? C MG . ? B MG 401 ? 1_555 O ? E HOH . ? B HOH 545 ? 1_555 110.6 ? 4 OP2 ? A G 65 ? B G 204 ? 1_555 MG ? C MG . ? B MG 401 ? 1_555 O ? E HOH . ? B HOH 546 ? 1_555 90.6 ? 5 O ? E HOH . ? B HOH 544 ? 1_555 MG ? C MG . ? B MG 401 ? 1_555 O ? E HOH . ? B HOH 546 ? 1_555 73.0 ? 6 O ? E HOH . ? B HOH 545 ? 1_555 MG ? C MG . ? B MG 401 ? 1_555 O ? E HOH . ? B HOH 546 ? 1_555 110.6 ? 7 OP2 ? A G 65 ? B G 204 ? 1_555 MG ? C MG . ? B MG 401 ? 1_555 O ? E HOH . ? B HOH 547 ? 1_555 74.9 ? 8 O ? E HOH . ? B HOH 544 ? 1_555 MG ? C MG . ? B MG 401 ? 1_555 O ? E HOH . ? B HOH 547 ? 1_555 146.5 ? 9 O ? E HOH . ? B HOH 545 ? 1_555 MG ? C MG . ? B MG 401 ? 1_555 O ? E HOH . ? B HOH 547 ? 1_555 94.0 ? 10 O ? E HOH . ? B HOH 546 ? 1_555 MG ? C MG . ? B MG 401 ? 1_555 O ? E HOH . ? B HOH 547 ? 1_555 120.0 ? 11 OP2 ? A G 65 ? B G 204 ? 1_555 MG ? C MG . ? B MG 401 ? 1_555 O ? E HOH . ? B HOH 548 ? 1_555 77.3 ? 12 O ? E HOH . ? B HOH 544 ? 1_555 MG ? C MG . ? B MG 401 ? 1_555 O ? E HOH . ? B HOH 548 ? 1_555 72.0 ? 13 O ? E HOH . ? B HOH 545 ? 1_555 MG ? C MG . ? B MG 401 ? 1_555 O ? E HOH . ? B HOH 548 ? 1_555 84.5 ? 14 O ? E HOH . ? B HOH 546 ? 1_555 MG ? C MG . ? B MG 401 ? 1_555 O ? E HOH . ? B HOH 548 ? 1_555 144.9 ? 15 O ? E HOH . ? B HOH 547 ? 1_555 MG ? C MG . ? B MG 401 ? 1_555 O ? E HOH . ? B HOH 548 ? 1_555 88.9 ? 16 N7 ? A G 70 ? B G 209 ? 1_555 MG ? D MG . ? B MG 402 ? 1_555 OP2 ? A A 72 ? B A 211 ? 1_555 78.2 ? 17 N7 ? A G 70 ? B G 209 ? 1_555 MG ? D MG . ? B MG 402 ? 1_555 O ? E HOH . ? B HOH 549 ? 1_555 93.4 ? 18 OP2 ? A A 72 ? B A 211 ? 1_555 MG ? D MG . ? B MG 402 ? 1_555 O ? E HOH . ? B HOH 549 ? 1_555 129.0 ? 19 N7 ? A G 70 ? B G 209 ? 1_555 MG ? D MG . ? B MG 402 ? 1_555 O ? E HOH . ? B HOH 550 ? 1_555 85.1 ? 20 OP2 ? A A 72 ? B A 211 ? 1_555 MG ? D MG . ? B MG 402 ? 1_555 O ? E HOH . ? B HOH 550 ? 1_555 130.6 ? 21 O ? E HOH . ? B HOH 549 ? 1_555 MG ? D MG . ? B MG 402 ? 1_555 O ? E HOH . ? B HOH 550 ? 1_555 97.8 ? 22 N7 ? A G 70 ? B G 209 ? 1_555 MG ? D MG . ? B MG 402 ? 1_555 O ? E HOH . ? B HOH 551 ? 1_555 153.7 ? 23 OP2 ? A A 72 ? B A 211 ? 1_555 MG ? D MG . ? B MG 402 ? 1_555 O ? E HOH . ? B HOH 551 ? 1_555 106.0 ? 24 O ? E HOH . ? B HOH 549 ? 1_555 MG ? D MG . ? B MG 402 ? 1_555 O ? E HOH . ? B HOH 551 ? 1_555 102.8 ? 25 O ? E HOH . ? B HOH 550 ? 1_555 MG ? D MG . ? B MG 402 ? 1_555 O ? E HOH . ? B HOH 551 ? 1_555 72.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-06-07 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-03-07 5 'Structure model' 1 4 2019-07-24 6 'Structure model' 1 5 2023-08-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Refinement description' 6 6 'Structure model' 'Data collection' 7 6 'Structure model' 'Database references' 8 6 'Structure model' 'Derived calculations' 9 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' diffrn_source 2 5 'Structure model' software 3 6 'Structure model' chem_comp_atom 4 6 'Structure model' chem_comp_bond 5 6 'Structure model' database_2 6 6 'Structure model' pdbx_initial_refinement_model 7 6 'Structure model' pdbx_struct_conn_angle 8 6 'Structure model' struct_conn 9 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 2 5 'Structure model' '_software.name' 3 5 'Structure model' '_software.version' 4 6 'Structure model' '_database_2.pdbx_DOI' 5 6 'Structure model' '_database_2.pdbx_database_accession' 6 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 9 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 10 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 11 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 12 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 13 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 14 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 15 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 16 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 17 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 18 6 'Structure model' '_pdbx_struct_conn_angle.value' 19 6 'Structure model' '_struct_conn.pdbx_dist_value' 20 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 26 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 27 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 28 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 29 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 30 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 31 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 32 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 33 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 34 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 16.3583 -9.4664 34.9391 0.2885 0.2493 0.3706 0.0060 -0.0115 -0.0049 0.6047 1.2217 0.6923 -0.1131 -0.1255 -0.2236 0.0470 -0.0043 -0.0402 -0.0369 -0.0043 0.0634 -0.0041 -0.0422 -0.0427 'X-RAY DIFFRACTION' 2 ? refined 28.5041 -3.5636 95.3851 0.6288 0.2949 0.1713 -0.0151 -0.0413 -0.1118 3.1869 0.6394 6.7911 -1.2550 2.7314 -2.3148 -0.3703 -0.2321 -0.0403 -0.4271 0.0993 -0.2539 -0.6070 -0.4760 0.2709 'X-RAY DIFFRACTION' 3 ? refined 33.9950 -4.1034 79.9917 0.2190 0.5546 0.0245 -0.0713 -0.0076 0.1160 4.3689 3.4800 14.3823 -1.4749 1.6162 -1.0830 -0.1599 -0.0157 -0.2808 0.3397 -0.1936 -0.2206 -0.3272 0.9557 0.3535 'X-RAY DIFFRACTION' 4 ? refined 18.5318 3.8451 56.2306 0.3344 0.3237 0.3243 0.0011 -0.0140 -0.0425 0.8089 0.8044 -0.1932 -0.4015 0.2603 -0.5647 -0.0673 -0.1655 0.1075 0.1695 0.0501 -0.0159 -0.1041 -0.0784 0.0172 'X-RAY DIFFRACTION' 5 ? refined 36.0895 -3.0503 49.9714 0.3123 0.3502 0.3148 0.0018 0.0126 0.0045 0.9100 0.2983 -0.8957 0.0633 0.0515 0.0562 0.0824 -0.2183 -0.0160 -0.0120 0.0443 0.0077 -0.0650 0.0968 -0.1267 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 B 1 1 B 87 87 ? A A 'X-RAY DIFFRACTION' ? 2 2 A 1 140 A 9 148 ? B B 'X-RAY DIFFRACTION' ? 3 2 A 94 233 A 97 236 ? B B 'X-RAY DIFFRACTION' ? 4 3 A 43 182 A 59 198 ? B B 'X-RAY DIFFRACTION' ? 5 3 A 87 226 A 93 232 ? B B 'X-RAY DIFFRACTION' ? 6 4 A 10 149 A 42 181 ? B B 'X-RAY DIFFRACTION' ? 7 5 A 60 199 A 86 225 ? B B 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.0 ? 1 CNS refinement . ? 2 DENZO 'data reduction' . ? 3 CCP4 'data scaling' '(SCALA)' ? 4 CNS phasing . ? 5 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C5'" B U 183 ? ? "C4'" B U 183 ? ? 1.463 1.508 -0.045 0.007 N 2 1 P B G 213 ? ? "O5'" B G 213 ? ? 1.528 1.593 -0.065 0.010 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" B C 141 ? ? "C5'" B C 141 ? ? "C4'" B C 141 ? ? 98.17 109.40 -11.23 0.80 N 2 1 "C5'" B C 141 ? ? "C4'" B C 141 ? ? "C3'" B C 141 ? ? 106.36 115.20 -8.84 1.40 N 3 1 N9 B A 156 ? ? "C1'" B A 156 ? ? "C2'" B A 156 ? ? 121.84 114.00 7.84 1.30 N 4 1 "C3'" B U 159 ? ? "C2'" B U 159 ? ? "C1'" B U 159 ? ? 96.07 101.30 -5.23 0.70 N 5 1 "O4'" B C 161 ? ? "C1'" B C 161 ? ? N1 B C 161 ? ? 112.98 108.50 4.48 0.70 N 6 1 C5 B G 163 ? ? C6 B G 163 ? ? O6 B G 163 ? ? 124.80 128.60 -3.80 0.60 N 7 1 "O4'" B U 164 ? ? "C1'" B U 164 ? ? "C2'" B U 164 ? ? 99.24 105.80 -6.56 1.00 N 8 1 "O3'" B G 166 ? ? P B G 167 ? ? OP1 B G 167 ? ? 120.57 110.50 10.07 1.10 Y 9 1 "C4'" B C 182 ? ? "C3'" B C 182 ? ? "C2'" B C 182 ? ? 96.13 102.60 -6.47 1.00 N 10 1 "C3'" B C 182 ? ? "C2'" B C 182 ? ? "C1'" B C 182 ? ? 93.98 101.30 -7.32 0.70 N 11 1 N1 B C 182 ? ? "C1'" B C 182 ? ? "C2'" B C 182 ? ? 101.63 112.00 -10.37 1.10 N 12 1 P B U 183 ? ? "O5'" B U 183 ? ? "C5'" B U 183 ? ? 109.72 120.90 -11.18 1.60 N 13 1 "C5'" B U 183 ? ? "C4'" B U 183 ? ? "O4'" B U 183 ? ? 116.50 109.80 6.70 0.90 N 14 1 "C5'" B U 184 ? ? "C4'" B U 184 ? ? "C3'" B U 184 ? ? 105.83 115.20 -9.37 1.40 N 15 1 "C3'" B U 184 ? ? "C2'" B U 184 ? ? "C1'" B U 184 ? ? 91.35 101.30 -9.95 0.70 N 16 1 "O4'" B U 184 ? ? "C1'" B U 184 ? ? N1 B U 184 ? ? 101.31 108.20 -6.89 0.80 N 17 1 "C3'" B U 184 ? ? "O3'" B U 184 ? ? P B U 185 ? ? 108.60 119.70 -11.10 1.20 Y 18 1 "O4'" B U 185 ? ? "C4'" B U 185 ? ? "C3'" B U 185 ? ? 94.64 104.00 -9.36 1.00 N 19 1 "C5'" B U 185 ? ? "C4'" B U 185 ? ? "C3'" B U 185 ? ? 126.52 116.00 10.52 1.60 N 20 1 "O4'" B U 185 ? ? "C1'" B U 185 ? ? N1 B U 185 ? ? 113.83 108.50 5.33 0.70 N 21 1 "C3'" B U 185 ? ? "O3'" B U 185 ? ? P B A 186 ? ? 127.00 119.70 7.30 1.20 Y 22 1 "O3'" B U 185 ? ? P B A 186 ? ? OP1 B A 186 ? ? 118.13 110.50 7.63 1.10 Y 23 1 "O5'" B A 186 ? ? P B A 186 ? ? OP2 B A 186 ? ? 97.62 105.70 -8.08 0.90 N 24 1 "O4'" B A 203 ? ? "C1'" B A 203 ? ? N9 B A 203 ? ? 113.27 108.50 4.77 0.70 N 25 1 N9 B G 204 ? ? "C1'" B G 204 ? ? "C2'" B G 204 ? ? 105.20 112.00 -6.80 1.10 N 26 1 "O4'" B G 204 ? ? "C1'" B G 204 ? ? N9 B G 204 ? ? 113.14 108.50 4.64 0.70 N 27 1 "O3'" B C 206 ? ? P B C 207 ? ? OP1 B C 207 ? ? 120.53 110.50 10.03 1.10 Y 28 1 "O5'" B C 207 ? ? P B C 207 ? ? OP2 B C 207 ? ? 98.34 105.70 -7.36 0.90 N 29 1 "C3'" B A 212 ? ? "O3'" B A 212 ? ? P B G 213 ? ? 110.07 119.70 -9.63 1.20 Y 30 1 "O5'" B G 213 ? ? "C5'" B G 213 ? ? "C4'" B G 213 ? ? 99.91 109.40 -9.49 0.80 N 31 1 "C5'" B G 213 ? ? "C4'" B G 213 ? ? "O4'" B G 213 ? ? 117.75 109.80 7.95 0.90 N 32 1 C5 B G 213 ? ? C6 B G 213 ? ? O6 B G 213 ? ? 123.82 128.60 -4.78 0.60 N 33 1 "O5'" B G 214 ? ? "C5'" B G 214 ? ? "C4'" B G 214 ? ? 104.59 109.40 -4.81 0.80 N 34 1 "C5'" B G 214 ? ? "C4'" B G 214 ? ? "O4'" B G 214 ? ? 118.31 109.80 8.51 0.90 N 35 1 "O4'" B G 214 ? ? "C1'" B G 214 ? ? N9 B G 214 ? ? 114.62 108.50 6.12 0.70 N 36 1 P B U 224 ? ? "O5'" B U 224 ? ? "C5'" B U 224 ? ? 110.22 120.90 -10.68 1.60 N 37 1 "C4'" B A 232 ? ? "C3'" B A 232 ? ? "C2'" B A 232 ? ? 95.88 102.60 -6.72 1.00 N 38 1 CB A ASP 50 ? ? CG A ASP 50 ? ? OD2 A ASP 50 ? ? 124.36 118.30 6.06 0.90 N 39 1 CB A VAL 66 ? ? CA A VAL 66 ? ? C A VAL 66 ? ? 98.08 111.40 -13.32 1.90 N 40 1 CB A ASP 67 ? ? CG A ASP 67 ? ? OD2 A ASP 67 ? ? 123.81 118.30 5.51 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 28 ? ? 40.72 70.57 2 1 LYS A 84 ? ? -69.41 1.45 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 HOH O O N N 268 HOH H1 H N N 269 HOH H2 H N N 270 ILE N N N N 271 ILE CA C N S 272 ILE C C N N 273 ILE O O N N 274 ILE CB C N S 275 ILE CG1 C N N 276 ILE CG2 C N N 277 ILE CD1 C N N 278 ILE OXT O N N 279 ILE H H N N 280 ILE H2 H N N 281 ILE HA H N N 282 ILE HB H N N 283 ILE HG12 H N N 284 ILE HG13 H N N 285 ILE HG21 H N N 286 ILE HG22 H N N 287 ILE HG23 H N N 288 ILE HD11 H N N 289 ILE HD12 H N N 290 ILE HD13 H N N 291 ILE HXT H N N 292 LEU N N N N 293 LEU CA C N S 294 LEU C C N N 295 LEU O O N N 296 LEU CB C N N 297 LEU CG C N N 298 LEU CD1 C N N 299 LEU CD2 C N N 300 LEU OXT O N N 301 LEU H H N N 302 LEU H2 H N N 303 LEU HA H N N 304 LEU HB2 H N N 305 LEU HB3 H N N 306 LEU HG H N N 307 LEU HD11 H N N 308 LEU HD12 H N N 309 LEU HD13 H N N 310 LEU HD21 H N N 311 LEU HD22 H N N 312 LEU HD23 H N N 313 LEU HXT H N N 314 LYS N N N N 315 LYS CA C N S 316 LYS C C N N 317 LYS O O N N 318 LYS CB C N N 319 LYS CG C N N 320 LYS CD C N N 321 LYS CE C N N 322 LYS NZ N N N 323 LYS OXT O N N 324 LYS H H N N 325 LYS H2 H N N 326 LYS HA H N N 327 LYS HB2 H N N 328 LYS HB3 H N N 329 LYS HG2 H N N 330 LYS HG3 H N N 331 LYS HD2 H N N 332 LYS HD3 H N N 333 LYS HE2 H N N 334 LYS HE3 H N N 335 LYS HZ1 H N N 336 LYS HZ2 H N N 337 LYS HZ3 H N N 338 LYS HXT H N N 339 MET N N N N 340 MET CA C N S 341 MET C C N N 342 MET O O N N 343 MET CB C N N 344 MET CG C N N 345 MET SD S N N 346 MET CE C N N 347 MET OXT O N N 348 MET H H N N 349 MET H2 H N N 350 MET HA H N N 351 MET HB2 H N N 352 MET HB3 H N N 353 MET HG2 H N N 354 MET HG3 H N N 355 MET HE1 H N N 356 MET HE2 H N N 357 MET HE3 H N N 358 MET HXT H N N 359 MG MG MG N N 360 PRO N N N N 361 PRO CA C N S 362 PRO C C N N 363 PRO O O N N 364 PRO CB C N N 365 PRO CG C N N 366 PRO CD C N N 367 PRO OXT O N N 368 PRO H H N N 369 PRO HA H N N 370 PRO HB2 H N N 371 PRO HB3 H N N 372 PRO HG2 H N N 373 PRO HG3 H N N 374 PRO HD2 H N N 375 PRO HD3 H N N 376 PRO HXT H N N 377 SER N N N N 378 SER CA C N S 379 SER C C N N 380 SER O O N N 381 SER CB C N N 382 SER OG O N N 383 SER OXT O N N 384 SER H H N N 385 SER H2 H N N 386 SER HA H N N 387 SER HB2 H N N 388 SER HB3 H N N 389 SER HG H N N 390 SER HXT H N N 391 TRP N N N N 392 TRP CA C N S 393 TRP C C N N 394 TRP O O N N 395 TRP CB C N N 396 TRP CG C Y N 397 TRP CD1 C Y N 398 TRP CD2 C Y N 399 TRP NE1 N Y N 400 TRP CE2 C Y N 401 TRP CE3 C Y N 402 TRP CZ2 C Y N 403 TRP CZ3 C Y N 404 TRP CH2 C Y N 405 TRP OXT O N N 406 TRP H H N N 407 TRP H2 H N N 408 TRP HA H N N 409 TRP HB2 H N N 410 TRP HB3 H N N 411 TRP HD1 H N N 412 TRP HE1 H N N 413 TRP HE3 H N N 414 TRP HZ2 H N N 415 TRP HZ3 H N N 416 TRP HH2 H N N 417 TRP HXT H N N 418 TYR N N N N 419 TYR CA C N S 420 TYR C C N N 421 TYR O O N N 422 TYR CB C N N 423 TYR CG C Y N 424 TYR CD1 C Y N 425 TYR CD2 C Y N 426 TYR CE1 C Y N 427 TYR CE2 C Y N 428 TYR CZ C Y N 429 TYR OH O N N 430 TYR OXT O N N 431 TYR H H N N 432 TYR H2 H N N 433 TYR HA H N N 434 TYR HB2 H N N 435 TYR HB3 H N N 436 TYR HD1 H N N 437 TYR HD2 H N N 438 TYR HE1 H N N 439 TYR HE2 H N N 440 TYR HH H N N 441 TYR HXT H N N 442 U OP3 O N N 443 U P P N N 444 U OP1 O N N 445 U OP2 O N N 446 U "O5'" O N N 447 U "C5'" C N N 448 U "C4'" C N R 449 U "O4'" O N N 450 U "C3'" C N S 451 U "O3'" O N N 452 U "C2'" C N R 453 U "O2'" O N N 454 U "C1'" C N R 455 U N1 N N N 456 U C2 C N N 457 U O2 O N N 458 U N3 N N N 459 U C4 C N N 460 U O4 O N N 461 U C5 C N N 462 U C6 C N N 463 U HOP3 H N N 464 U HOP2 H N N 465 U "H5'" H N N 466 U "H5''" H N N 467 U "H4'" H N N 468 U "H3'" H N N 469 U "HO3'" H N N 470 U "H2'" H N N 471 U "HO2'" H N N 472 U "H1'" H N N 473 U H3 H N N 474 U H5 H N N 475 U H6 H N N 476 VAL N N N N 477 VAL CA C N S 478 VAL C C N N 479 VAL O O N N 480 VAL CB C N N 481 VAL CG1 C N N 482 VAL CG2 C N N 483 VAL OXT O N N 484 VAL H H N N 485 VAL H2 H N N 486 VAL HA H N N 487 VAL HB H N N 488 VAL HG11 H N N 489 VAL HG12 H N N 490 VAL HG13 H N N 491 VAL HG21 H N N 492 VAL HG22 H N N 493 VAL HG23 H N N 494 VAL HXT H N N 495 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 HOH O H1 sing N N 265 HOH O H2 sing N N 266 ILE N CA sing N N 267 ILE N H sing N N 268 ILE N H2 sing N N 269 ILE CA C sing N N 270 ILE CA CB sing N N 271 ILE CA HA sing N N 272 ILE C O doub N N 273 ILE C OXT sing N N 274 ILE CB CG1 sing N N 275 ILE CB CG2 sing N N 276 ILE CB HB sing N N 277 ILE CG1 CD1 sing N N 278 ILE CG1 HG12 sing N N 279 ILE CG1 HG13 sing N N 280 ILE CG2 HG21 sing N N 281 ILE CG2 HG22 sing N N 282 ILE CG2 HG23 sing N N 283 ILE CD1 HD11 sing N N 284 ILE CD1 HD12 sing N N 285 ILE CD1 HD13 sing N N 286 ILE OXT HXT sing N N 287 LEU N CA sing N N 288 LEU N H sing N N 289 LEU N H2 sing N N 290 LEU CA C sing N N 291 LEU CA CB sing N N 292 LEU CA HA sing N N 293 LEU C O doub N N 294 LEU C OXT sing N N 295 LEU CB CG sing N N 296 LEU CB HB2 sing N N 297 LEU CB HB3 sing N N 298 LEU CG CD1 sing N N 299 LEU CG CD2 sing N N 300 LEU CG HG sing N N 301 LEU CD1 HD11 sing N N 302 LEU CD1 HD12 sing N N 303 LEU CD1 HD13 sing N N 304 LEU CD2 HD21 sing N N 305 LEU CD2 HD22 sing N N 306 LEU CD2 HD23 sing N N 307 LEU OXT HXT sing N N 308 LYS N CA sing N N 309 LYS N H sing N N 310 LYS N H2 sing N N 311 LYS CA C sing N N 312 LYS CA CB sing N N 313 LYS CA HA sing N N 314 LYS C O doub N N 315 LYS C OXT sing N N 316 LYS CB CG sing N N 317 LYS CB HB2 sing N N 318 LYS CB HB3 sing N N 319 LYS CG CD sing N N 320 LYS CG HG2 sing N N 321 LYS CG HG3 sing N N 322 LYS CD CE sing N N 323 LYS CD HD2 sing N N 324 LYS CD HD3 sing N N 325 LYS CE NZ sing N N 326 LYS CE HE2 sing N N 327 LYS CE HE3 sing N N 328 LYS NZ HZ1 sing N N 329 LYS NZ HZ2 sing N N 330 LYS NZ HZ3 sing N N 331 LYS OXT HXT sing N N 332 MET N CA sing N N 333 MET N H sing N N 334 MET N H2 sing N N 335 MET CA C sing N N 336 MET CA CB sing N N 337 MET CA HA sing N N 338 MET C O doub N N 339 MET C OXT sing N N 340 MET CB CG sing N N 341 MET CB HB2 sing N N 342 MET CB HB3 sing N N 343 MET CG SD sing N N 344 MET CG HG2 sing N N 345 MET CG HG3 sing N N 346 MET SD CE sing N N 347 MET CE HE1 sing N N 348 MET CE HE2 sing N N 349 MET CE HE3 sing N N 350 MET OXT HXT sing N N 351 PRO N CA sing N N 352 PRO N CD sing N N 353 PRO N H sing N N 354 PRO CA C sing N N 355 PRO CA CB sing N N 356 PRO CA HA sing N N 357 PRO C O doub N N 358 PRO C OXT sing N N 359 PRO CB CG sing N N 360 PRO CB HB2 sing N N 361 PRO CB HB3 sing N N 362 PRO CG CD sing N N 363 PRO CG HG2 sing N N 364 PRO CG HG3 sing N N 365 PRO CD HD2 sing N N 366 PRO CD HD3 sing N N 367 PRO OXT HXT sing N N 368 SER N CA sing N N 369 SER N H sing N N 370 SER N H2 sing N N 371 SER CA C sing N N 372 SER CA CB sing N N 373 SER CA HA sing N N 374 SER C O doub N N 375 SER C OXT sing N N 376 SER CB OG sing N N 377 SER CB HB2 sing N N 378 SER CB HB3 sing N N 379 SER OG HG sing N N 380 SER OXT HXT sing N N 381 TRP N CA sing N N 382 TRP N H sing N N 383 TRP N H2 sing N N 384 TRP CA C sing N N 385 TRP CA CB sing N N 386 TRP CA HA sing N N 387 TRP C O doub N N 388 TRP C OXT sing N N 389 TRP CB CG sing N N 390 TRP CB HB2 sing N N 391 TRP CB HB3 sing N N 392 TRP CG CD1 doub Y N 393 TRP CG CD2 sing Y N 394 TRP CD1 NE1 sing Y N 395 TRP CD1 HD1 sing N N 396 TRP CD2 CE2 doub Y N 397 TRP CD2 CE3 sing Y N 398 TRP NE1 CE2 sing Y N 399 TRP NE1 HE1 sing N N 400 TRP CE2 CZ2 sing Y N 401 TRP CE3 CZ3 doub Y N 402 TRP CE3 HE3 sing N N 403 TRP CZ2 CH2 doub Y N 404 TRP CZ2 HZ2 sing N N 405 TRP CZ3 CH2 sing Y N 406 TRP CZ3 HZ3 sing N N 407 TRP CH2 HH2 sing N N 408 TRP OXT HXT sing N N 409 TYR N CA sing N N 410 TYR N H sing N N 411 TYR N H2 sing N N 412 TYR CA C sing N N 413 TYR CA CB sing N N 414 TYR CA HA sing N N 415 TYR C O doub N N 416 TYR C OXT sing N N 417 TYR CB CG sing N N 418 TYR CB HB2 sing N N 419 TYR CB HB3 sing N N 420 TYR CG CD1 doub Y N 421 TYR CG CD2 sing Y N 422 TYR CD1 CE1 sing Y N 423 TYR CD1 HD1 sing N N 424 TYR CD2 CE2 doub Y N 425 TYR CD2 HD2 sing N N 426 TYR CE1 CZ doub Y N 427 TYR CE1 HE1 sing N N 428 TYR CE2 CZ sing Y N 429 TYR CE2 HE2 sing N N 430 TYR CZ OH sing N N 431 TYR OH HH sing N N 432 TYR OXT HXT sing N N 433 U OP3 P sing N N 434 U OP3 HOP3 sing N N 435 U P OP1 doub N N 436 U P OP2 sing N N 437 U P "O5'" sing N N 438 U OP2 HOP2 sing N N 439 U "O5'" "C5'" sing N N 440 U "C5'" "C4'" sing N N 441 U "C5'" "H5'" sing N N 442 U "C5'" "H5''" sing N N 443 U "C4'" "O4'" sing N N 444 U "C4'" "C3'" sing N N 445 U "C4'" "H4'" sing N N 446 U "O4'" "C1'" sing N N 447 U "C3'" "O3'" sing N N 448 U "C3'" "C2'" sing N N 449 U "C3'" "H3'" sing N N 450 U "O3'" "HO3'" sing N N 451 U "C2'" "O2'" sing N N 452 U "C2'" "C1'" sing N N 453 U "C2'" "H2'" sing N N 454 U "O2'" "HO2'" sing N N 455 U "C1'" N1 sing N N 456 U "C1'" "H1'" sing N N 457 U N1 C2 sing N N 458 U N1 C6 sing N N 459 U C2 O2 doub N N 460 U C2 N3 sing N N 461 U N3 C4 sing N N 462 U N3 H3 sing N N 463 U C4 O4 doub N N 464 U C4 C5 sing N N 465 U C5 C6 doub N N 466 U C5 H5 sing N N 467 U C6 H6 sing N N 468 VAL N CA sing N N 469 VAL N H sing N N 470 VAL N H2 sing N N 471 VAL CA C sing N N 472 VAL CA CB sing N N 473 VAL CA HA sing N N 474 VAL C O doub N N 475 VAL C OXT sing N N 476 VAL CB CG1 sing N N 477 VAL CB CG2 sing N N 478 VAL CB HB sing N N 479 VAL CG1 HG11 sing N N 480 VAL CG1 HG12 sing N N 481 VAL CG1 HG13 sing N N 482 VAL CG2 HG21 sing N N 483 VAL CG2 HG22 sing N N 484 VAL CG2 HG23 sing N N 485 VAL OXT HXT sing N N 486 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1LNG 'double helix' 1LNG 'a-form double helix' 1LNG 'bulge loop' 1LNG 'mismatched base pair' 1LNG 'internal loop' 1LNG 'quadruple helix' 1LNG 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 3 1_555 A C 97 1_555 -0.046 0.070 -0.133 7.323 -2.326 -0.850 1 B_G142:C236_B B 142 ? B 236 ? 19 1 1 A G 4 1_555 A U 96 1_555 -0.490 -0.485 0.288 6.837 -8.631 -16.896 2 B_G143:U235_B B 143 ? B 235 ? 28 1 1 A C 5 1_555 A G 95 1_555 0.387 -0.132 -0.265 0.243 -2.490 -6.046 3 B_C144:G234_B B 144 ? B 234 ? 19 1 1 A G 6 1_555 A C 94 1_555 0.754 0.428 0.602 -5.130 -0.673 -12.366 4 B_G145:C233_B B 145 ? B 233 ? ? ? 1 A C 48 1_555 A G 92 1_555 0.006 -0.022 0.790 -2.550 -0.361 6.761 5 B_C187:G231_B B 187 ? B 231 ? 19 1 1 A C 49 1_555 A G 91 1_555 0.318 -0.029 -0.225 -0.966 -6.698 -13.504 6 B_C188:G230_B B 188 ? B 230 ? ? ? 1 A U 50 1_555 A A 90 1_555 1.206 -0.098 0.763 -10.869 -13.782 11.449 7 B_U189:A229_B B 189 ? B 229 ? ? 1 1 A G 51 1_555 A C 89 1_555 -0.211 -0.241 -0.018 5.495 -1.772 -13.584 8 B_G190:C228_B B 190 ? B 228 ? 19 1 1 A C 52 1_555 A G 88 1_555 0.822 0.497 0.213 5.951 -4.550 6.701 9 B_C191:G227_B B 191 ? B 227 ? ? ? 1 A C 53 1_555 A G 87 1_555 -0.714 -0.183 0.346 3.216 -11.486 1.536 10 B_C192:G226_B B 192 ? B 226 ? 19 1 1 A G 54 1_555 A A 86 1_555 6.904 -4.129 -0.151 -7.677 -9.413 2.173 11 B_G193:A225_B B 193 ? B 225 ? 11 10 1 A A 55 1_555 A U 85 1_555 -3.365 -1.637 -0.110 3.205 -2.448 -100.052 12 B_A194:U224_B B 194 ? B 224 ? 24 4 1 A C 59 1_555 A G 84 1_555 0.394 -0.393 0.305 1.243 -11.032 3.889 13 B_C198:G223_B B 198 ? B 223 ? 19 1 1 A C 60 1_555 A G 83 1_555 0.011 -0.262 -0.295 2.428 -11.827 -2.735 14 B_C199:G222_B B 199 ? B 222 ? 19 1 1 A G 61 1_555 A C 82 1_555 -0.064 0.112 -0.057 -5.312 -11.921 3.382 15 B_G200:C221_B B 200 ? B 221 ? 19 1 1 A C 62 1_555 A A 81 1_555 5.296 -1.152 0.248 -12.792 -12.419 -5.296 16 B_C201:A220_B B 201 ? B 220 ? ? ? 1 A C 63 1_555 A A 80 1_555 6.531 -4.761 0.785 -7.824 -11.793 -21.235 17 B_C202:A219_B B 202 ? B 219 ? ? 6 1 A A 64 1_555 A C 79 1_555 -3.039 -0.260 -0.564 -6.546 -6.037 -96.053 18 B_A203:C218_B B 203 ? B 218 ? 25 4 1 A G 65 1_555 A G 78 1_555 -7.253 -2.192 0.464 11.018 -6.184 -17.632 19 B_G204:G217_B B 204 ? B 217 ? ? ? 1 A G 66 1_555 A A 77 1_555 -0.413 1.257 -0.187 10.385 -10.009 -18.442 20 B_G205:A216_B B 205 ? B 216 ? 8 ? 1 A C 67 1_555 A G 76 1_555 0.368 -0.258 -0.102 11.370 -15.948 -4.560 21 B_C206:G215_B B 206 ? B 215 ? 19 1 1 A C 68 1_555 A G 75 1_555 0.072 -0.147 0.173 -0.353 -9.612 -0.853 22 B_C207:G214_B B 207 ? B 214 ? 19 1 1 A C 69 1_555 A G 74 1_555 0.574 -0.207 -0.171 10.050 8.702 -0.754 23 B_C208:G213_B B 208 ? B 213 ? 19 1 1 A A 26 1_555 A A 73 1_555 -1.599 -1.194 0.389 -0.658 -14.643 179.009 24 B_A165:A212_B B 165 ? B 212 ? 1 2 1 A G 9 1_555 A C 43 1_555 -0.126 0.142 0.492 0.260 -9.422 4.320 25 B_G148:C182_B B 148 ? B 182 ? 19 1 1 A G 10 1_555 A C 42 1_555 0.623 -0.329 -0.142 -7.605 -5.496 -0.601 26 B_G149:C181_B B 149 ? B 181 ? 19 1 1 A G 11 1_555 A C 41 1_555 0.713 -0.426 -0.217 0.691 1.367 -8.639 27 B_G150:C180_B B 150 ? B 180 ? 19 1 1 A G 12 1_555 A C 40 1_555 0.707 -0.292 0.277 2.954 -0.574 -5.363 28 B_G151:C179_B B 151 ? B 179 ? 19 1 1 A G 13 1_555 A C 39 1_555 0.000 -0.286 0.072 -2.833 -5.247 0.871 29 B_G152:C178_B B 152 ? B 178 ? 19 1 1 A G 15 1_555 A U 36 1_555 -1.233 -0.470 -0.159 -3.639 -13.894 -8.159 30 B_G154:U175_B B 154 ? B 175 ? 28 1 1 A C 16 1_555 A G 35 1_555 -0.005 -0.105 0.041 10.437 -19.508 1.890 31 B_C155:G174_B B 155 ? B 174 ? 19 1 1 A A 17 1_555 A U 34 1_555 0.267 -0.238 0.119 -0.211 -10.507 4.179 32 B_A156:U173_B B 156 ? B 173 ? 20 1 1 A U 18 1_555 A A 33 1_555 0.024 -0.259 0.055 -2.588 -10.596 -0.366 33 B_U157:A172_B B 157 ? B 172 ? 20 1 1 A C 19 1_555 A G 32 1_555 0.115 -0.214 0.322 0.066 -10.931 -0.201 34 B_C158:G171_B B 158 ? B 171 ? 19 1 1 A U 20 1_555 A A 31 1_555 0.212 -0.178 -0.110 7.971 -1.712 -0.206 35 B_U159:A170_B B 159 ? B 170 ? 20 1 1 A C 21 1_555 A G 30 1_555 -0.047 -0.166 -0.292 9.742 -7.817 -0.535 36 B_C160:G169_B B 160 ? B 169 ? 19 1 1 A C 22 1_555 A G 29 1_555 -0.013 -0.064 -0.337 7.113 -5.813 -0.784 37 B_C161:G168_B B 161 ? B 168 ? 19 1 1 A U 23 1_555 A G 28 1_555 2.421 -0.792 -0.285 2.615 -2.516 1.478 38 B_U162:G167_B B 162 ? B 167 ? 28 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 3 1_555 A C 97 1_555 A G 4 1_555 A U 96 1_555 -0.647 -2.811 3.290 -4.732 3.048 28.279 -6.313 0.266 3.042 6.161 9.566 28.823 1 BB_G142G143:U235C236_BB B 142 ? B 236 ? B 143 ? B 235 ? 1 A G 4 1_555 A U 96 1_555 A C 5 1_555 A G 95 1_555 0.456 -2.257 3.410 3.461 1.127 34.010 -4.023 -0.208 3.365 1.920 -5.896 34.198 2 BB_G143C144:G234U235_BB B 143 ? B 235 ? B 144 ? B 234 ? 1 A C 5 1_555 A G 95 1_555 A G 6 1_555 A C 94 1_555 0.237 -2.598 3.075 3.063 9.232 38.408 -4.761 -0.043 2.423 13.766 -4.567 39.576 3 BB_C144G145:C233G234_BB B 144 ? B 234 ? B 145 ? B 233 ? 1 A G 6 1_555 A C 94 1_555 A C 48 1_555 A G 92 1_555 -0.702 -3.376 6.358 9.307 0.340 76.804 -2.722 1.077 6.241 0.273 -7.465 77.280 4 BB_G145C187:G231C233_BB B 145 ? B 233 ? B 187 ? B 231 ? 1 A C 48 1_555 A G 92 1_555 A C 49 1_555 A G 91 1_555 -0.299 -2.331 2.840 11.319 11.788 34.688 -4.667 1.522 1.803 18.551 -17.813 38.238 5 BB_C187C188:G230G231_BB B 187 ? B 231 ? B 188 ? B 230 ? 1 A C 49 1_555 A G 91 1_555 A U 50 1_555 A A 90 1_555 0.793 -2.396 3.253 -2.675 13.891 29.436 -6.271 -1.799 1.883 25.561 4.923 32.591 6 BB_C188U189:A229G230_BB B 188 ? B 230 ? B 189 ? B 229 ? 1 A U 50 1_555 A A 90 1_555 A G 51 1_555 A C 89 1_555 -1.576 -0.971 2.380 1.283 12.690 22.544 -4.429 3.750 1.531 29.610 -2.993 25.861 7 BB_U189G190:C228A229_BB B 189 ? B 229 ? B 190 ? B 228 ? 1 A G 51 1_555 A C 89 1_555 A C 52 1_555 A G 88 1_555 1.027 -2.082 3.243 -3.386 4.394 33.602 -4.212 -2.259 2.842 7.537 5.808 34.044 8 BB_G190C191:G227C228_BB B 190 ? B 228 ? B 191 ? B 227 ? 1 A C 52 1_555 A G 88 1_555 A C 53 1_555 A G 87 1_555 0.034 -2.705 2.993 -0.322 5.384 25.699 -7.164 -0.146 2.386 11.936 0.713 26.250 9 BB_C191C192:G226G227_BB B 191 ? B 227 ? B 192 ? B 226 ? 1 A C 53 1_555 A G 87 1_555 A G 54 1_555 A A 86 1_555 -0.733 -0.938 3.894 7.753 8.742 66.231 -1.245 1.014 3.664 7.937 -7.039 67.138 10 BB_C192G193:A225G226_BB B 192 ? B 226 ? B 193 ? B 225 ? 1 A G 54 1_555 A A 86 1_555 A A 55 1_555 A U 85 1_555 -5.132 -0.931 3.034 -1.534 8.776 -14.601 -2.097 -18.182 2.612 -31.039 -5.427 -17.092 11 BB_G193A194:U224A225_BB B 193 ? B 225 ? B 194 ? B 224 ? 1 A A 55 1_555 A U 85 1_555 A C 59 1_555 A G 84 1_555 3.493 -2.438 3.301 0.633 -3.372 79.276 -1.816 -2.719 3.409 -2.642 -0.496 79.338 12 BB_A194C198:G223U224_BB B 194 ? B 224 ? B 198 ? B 223 ? 1 A C 59 1_555 A G 84 1_555 A C 60 1_555 A G 83 1_555 -1.204 -2.068 3.118 3.357 3.294 25.839 -5.343 3.457 2.663 7.289 -7.430 26.256 13 BB_C198C199:G222G223_BB B 198 ? B 223 ? B 199 ? B 222 ? 1 A C 60 1_555 A G 83 1_555 A G 61 1_555 A C 82 1_555 0.217 -2.003 3.510 -1.809 9.530 32.494 -4.953 -0.660 2.811 16.576 3.146 33.874 14 BB_C199G200:C221G222_BB B 199 ? B 222 ? B 200 ? B 221 ? 1 A G 61 1_555 A C 82 1_555 A C 62 1_555 A A 81 1_555 -0.296 -1.122 3.614 0.714 2.794 51.341 -1.502 0.395 3.548 3.222 -0.824 51.416 15 BB_G200C201:A220C221_BB B 200 ? B 221 ? B 201 ? B 220 ? 1 A C 62 1_555 A A 81 1_555 A C 63 1_555 A A 80 1_555 -0.930 -1.332 3.225 2.472 4.035 43.809 -2.140 1.464 3.042 5.389 -3.302 44.051 16 BB_C201C202:A219A220_BB B 201 ? B 220 ? B 202 ? B 219 ? 1 A C 63 1_555 A A 80 1_555 A A 64 1_555 A C 79 1_555 -5.166 -0.140 2.817 -2.264 12.585 2.818 -15.116 20.047 1.366 76.397 13.742 13.092 17 BB_C202A203:C218A219_BB B 202 ? B 219 ? B 203 ? B 218 ? 1 A A 64 1_555 A C 79 1_555 A G 65 1_555 A G 78 1_555 4.966 -0.561 2.672 -0.953 0.696 24.955 -1.459 -11.704 2.468 1.609 2.204 24.983 18 BB_A203G204:G217C218_BB B 203 ? B 218 ? B 204 ? B 217 ? 1 A G 65 1_555 A G 78 1_555 A G 66 1_555 A A 77 1_555 -0.269 -1.625 3.498 -2.565 7.026 56.620 -2.103 0.134 3.300 7.372 2.691 57.071 19 BB_G204G205:A216G217_BB B 204 ? B 217 ? B 205 ? B 216 ? 1 A G 66 1_555 A A 77 1_555 A C 67 1_555 A G 76 1_555 0.713 -1.338 3.266 -2.702 3.492 36.414 -2.591 -1.493 3.070 5.562 4.304 36.672 20 BB_G205C206:G215A216_BB B 205 ? B 216 ? B 206 ? B 215 ? 1 A C 67 1_555 A G 76 1_555 A C 68 1_555 A G 75 1_555 0.442 -2.027 3.525 -2.879 6.563 31.879 -4.757 -1.290 3.009 11.763 5.160 32.654 21 BB_C206C207:G214G215_BB B 206 ? B 215 ? B 207 ? B 214 ? 1 A C 68 1_555 A G 75 1_555 A C 69 1_555 A G 74 1_555 -0.717 -1.825 3.102 -0.234 6.644 31.434 -4.364 1.258 2.675 12.094 0.425 32.112 22 BB_C207C208:G213G214_BB B 207 ? B 214 ? B 208 ? B 213 ? 1 A C 69 1_555 A G 74 1_555 A A 26 1_555 A A 73 1_555 -1.847 3.608 3.925 160.997 -56.002 -35.828 -0.860 1.802 3.998 29.085 83.615 -170.923 23 BB_C208A165:A212G213_BB B 208 ? B 213 ? B 165 ? B 212 ? 1 A G 9 1_555 A C 43 1_555 A G 10 1_555 A C 42 1_555 0.144 -1.734 3.484 5.517 7.999 37.147 -3.655 0.481 3.049 12.301 -8.484 38.354 24 BB_G148G149:C181C182_BB B 148 ? B 182 ? B 149 ? B 181 ? 1 A G 10 1_555 A C 42 1_555 A G 11 1_555 A C 41 1_555 -0.839 -1.335 3.170 2.002 6.326 33.647 -3.185 1.714 2.827 10.799 -3.417 34.277 25 BB_G149G150:C180C181_BB B 149 ? B 181 ? B 150 ? B 180 ? 1 A G 11 1_555 A C 41 1_555 A G 12 1_555 A C 40 1_555 0.163 -2.339 3.122 -3.114 4.678 25.158 -6.406 -1.140 2.612 10.573 7.038 25.769 26 BB_G150G151:C179C180_BB B 150 ? B 180 ? B 151 ? B 179 ? 1 A G 12 1_555 A C 40 1_555 A G 13 1_555 A C 39 1_555 0.273 -2.343 3.271 4.096 7.827 28.778 -5.981 0.240 2.573 15.299 -8.005 30.076 27 BB_G151G152:C178C179_BB B 151 ? B 179 ? B 152 ? B 178 ? 1 A G 13 1_555 A C 39 1_555 A G 15 1_555 A U 36 1_555 1.950 -2.318 6.352 0.757 12.542 84.516 -2.259 -1.407 6.044 9.281 -0.560 85.271 28 BB_G152G154:U175C178_BB B 152 ? B 178 ? B 154 ? B 175 ? 1 A G 15 1_555 A U 36 1_555 A C 16 1_555 A G 35 1_555 0.174 -1.235 2.889 -4.831 4.426 32.750 -2.778 -0.988 2.652 7.753 8.463 33.381 29 BB_G154C155:G174U175_BB B 154 ? B 175 ? B 155 ? B 174 ? 1 A C 16 1_555 A G 35 1_555 A A 17 1_555 A U 34 1_555 -0.650 -1.413 3.374 -3.100 14.747 37.898 -3.612 0.603 2.706 21.688 4.559 40.681 30 BB_C155A156:U173G174_BB B 155 ? B 174 ? B 156 ? B 173 ? 1 A A 17 1_555 A U 34 1_555 A U 18 1_555 A A 33 1_555 -0.475 -0.930 3.279 0.540 11.360 28.810 -3.835 0.989 2.717 21.789 -1.035 30.929 31 BB_A156U157:A172U173_BB B 156 ? B 173 ? B 157 ? B 172 ? 1 A U 18 1_555 A A 33 1_555 A C 19 1_555 A G 32 1_555 0.228 -1.374 3.220 -3.054 5.857 32.743 -3.310 -0.876 2.905 10.260 5.350 33.385 32 BB_U157C158:G171A172_BB B 157 ? B 172 ? B 158 ? B 171 ? 1 A C 19 1_555 A G 32 1_555 A U 20 1_555 A A 31 1_555 -0.056 -1.573 3.038 2.281 8.042 30.113 -4.247 0.479 2.533 15.116 -4.288 31.226 33 BB_C158U159:A170G171_BB B 158 ? B 171 ? B 159 ? B 170 ? 1 A U 20 1_555 A A 31 1_555 A C 21 1_555 A G 30 1_555 0.573 -2.115 3.317 1.975 2.157 29.384 -4.607 -0.706 3.188 4.239 -3.881 29.526 34 BB_U159C160:G169A170_BB B 159 ? B 170 ? B 160 ? B 169 ? 1 A C 21 1_555 A G 30 1_555 A C 22 1_555 A G 29 1_555 -0.758 -2.221 3.347 -3.961 8.340 26.470 -6.442 0.687 2.623 17.549 8.335 28.007 35 BB_C160C161:G168G169_BB B 160 ? B 169 ? B 161 ? B 168 ? 1 A C 22 1_555 A G 29 1_555 A U 23 1_555 A G 28 1_555 0.858 -1.915 3.479 1.019 3.428 42.664 -2.982 -1.069 3.341 4.702 -1.397 42.806 36 BB_C161U162:G167G168_BB B 161 ? B 168 ? B 162 ? B 167 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 water HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 1D4R 'PDB entries 1D4R and 1DUL' 2 ? 'experimental model' PDB 1DUL 'PDB entries 1D4R and 1DUL' #