data_1LOQ # _entry.id 1LOQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.289 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1LOQ RCSB RCSB016141 WWPDB D_1000016141 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1LOL 'orotidine monophoshate decarboxylase complexed with XMP' unspecified PDB 1LOR 'orotidine monophoshate decarboxylase complexed with BMP' unspecified PDB 1LOS 'orotidine monophoshate decarboxylase mutant delta R203A complexed with 6-azaUMP' unspecified PDB 1LP6 'orotidine monophoshate decarboxylase complexed with CMP' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1LOQ _pdbx_database_status.recvd_initial_deposition_date 2002-05-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wu, N.' 1 'Pai, E.F.' 2 # _citation.id primary _citation.title ;Crystal structures of inhibitor complexes reveal an alternate binding mode in orotidine-5'-monophosphate decarboxylase. ; _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 277 _citation.page_first 28080 _citation.page_last 28087 _citation.year 2002 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12011084 _citation.pdbx_database_id_DOI 10.1074/jbc.M202362200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Wu, N.' 1 primary 'Pai, E.F.' 2 # _cell.entry_id 1LOQ _cell.length_a 58.322 _cell.length_b 103.405 _cell.length_c 73.931 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1LOQ _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;orotidine 5'-monophosphate decarboxylase ; 24882.658 1 4.1.1.23 ? ? ? 2 non-polymer syn "URIDINE-5'-MONOPHOSPHATE" 324.181 1 ? ? ? ? 3 water nat water 18.015 193 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'OMP decarboxylase, ompdecase, ompdcase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;LRSRRVDVMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFG(CSO)RIIADFKVADI PETNEKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVG PSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDLLNP ; _entity_poly.pdbx_seq_one_letter_code_can ;LRSRRVDVMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETN EKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTR PERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDLLNP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 ARG n 1 3 SER n 1 4 ARG n 1 5 ARG n 1 6 VAL n 1 7 ASP n 1 8 VAL n 1 9 MET n 1 10 ASP n 1 11 VAL n 1 12 MET n 1 13 ASN n 1 14 ARG n 1 15 LEU n 1 16 ILE n 1 17 LEU n 1 18 ALA n 1 19 MET n 1 20 ASP n 1 21 LEU n 1 22 MET n 1 23 ASN n 1 24 ARG n 1 25 ASP n 1 26 ASP n 1 27 ALA n 1 28 LEU n 1 29 ARG n 1 30 VAL n 1 31 THR n 1 32 GLY n 1 33 GLU n 1 34 VAL n 1 35 ARG n 1 36 GLU n 1 37 TYR n 1 38 ILE n 1 39 ASP n 1 40 THR n 1 41 VAL n 1 42 LYS n 1 43 ILE n 1 44 GLY n 1 45 TYR n 1 46 PRO n 1 47 LEU n 1 48 VAL n 1 49 LEU n 1 50 SER n 1 51 GLU n 1 52 GLY n 1 53 MET n 1 54 ASP n 1 55 ILE n 1 56 ILE n 1 57 ALA n 1 58 GLU n 1 59 PHE n 1 60 ARG n 1 61 LYS n 1 62 ARG n 1 63 PHE n 1 64 GLY n 1 65 CSO n 1 66 ARG n 1 67 ILE n 1 68 ILE n 1 69 ALA n 1 70 ASP n 1 71 PHE n 1 72 LYS n 1 73 VAL n 1 74 ALA n 1 75 ASP n 1 76 ILE n 1 77 PRO n 1 78 GLU n 1 79 THR n 1 80 ASN n 1 81 GLU n 1 82 LYS n 1 83 ILE n 1 84 CYS n 1 85 ARG n 1 86 ALA n 1 87 THR n 1 88 PHE n 1 89 LYS n 1 90 ALA n 1 91 GLY n 1 92 ALA n 1 93 ASP n 1 94 ALA n 1 95 ILE n 1 96 ILE n 1 97 VAL n 1 98 HIS n 1 99 GLY n 1 100 PHE n 1 101 PRO n 1 102 GLY n 1 103 ALA n 1 104 ASP n 1 105 SER n 1 106 VAL n 1 107 ARG n 1 108 ALA n 1 109 CYS n 1 110 LEU n 1 111 ASN n 1 112 VAL n 1 113 ALA n 1 114 GLU n 1 115 GLU n 1 116 MET n 1 117 GLY n 1 118 ARG n 1 119 GLU n 1 120 VAL n 1 121 PHE n 1 122 LEU n 1 123 LEU n 1 124 THR n 1 125 GLU n 1 126 MET n 1 127 SER n 1 128 HIS n 1 129 PRO n 1 130 GLY n 1 131 ALA n 1 132 GLU n 1 133 MET n 1 134 PHE n 1 135 ILE n 1 136 GLN n 1 137 GLY n 1 138 ALA n 1 139 ALA n 1 140 ASP n 1 141 GLU n 1 142 ILE n 1 143 ALA n 1 144 ARG n 1 145 MET n 1 146 GLY n 1 147 VAL n 1 148 ASP n 1 149 LEU n 1 150 GLY n 1 151 VAL n 1 152 LYS n 1 153 ASN n 1 154 TYR n 1 155 VAL n 1 156 GLY n 1 157 PRO n 1 158 SER n 1 159 THR n 1 160 ARG n 1 161 PRO n 1 162 GLU n 1 163 ARG n 1 164 LEU n 1 165 SER n 1 166 ARG n 1 167 LEU n 1 168 ARG n 1 169 GLU n 1 170 ILE n 1 171 ILE n 1 172 GLY n 1 173 GLN n 1 174 ASP n 1 175 SER n 1 176 PHE n 1 177 LEU n 1 178 ILE n 1 179 SER n 1 180 PRO n 1 181 GLY n 1 182 VAL n 1 183 GLY n 1 184 ALA n 1 185 GLN n 1 186 GLY n 1 187 GLY n 1 188 ASP n 1 189 PRO n 1 190 GLY n 1 191 GLU n 1 192 THR n 1 193 LEU n 1 194 ARG n 1 195 PHE n 1 196 ALA n 1 197 ASP n 1 198 ALA n 1 199 ILE n 1 200 ILE n 1 201 VAL n 1 202 GLY n 1 203 ARG n 1 204 SER n 1 205 ILE n 1 206 TYR n 1 207 LEU n 1 208 ALA n 1 209 ASP n 1 210 ASN n 1 211 PRO n 1 212 ALA n 1 213 ALA n 1 214 ALA n 1 215 ALA n 1 216 ALA n 1 217 GLY n 1 218 ILE n 1 219 ILE n 1 220 GLU n 1 221 SER n 1 222 ILE n 1 223 LYS n 1 224 ASP n 1 225 LEU n 1 226 LEU n 1 227 ASN n 1 228 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'delta H' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name Archaea _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2157 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PYRF_METTH _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MRSRRVDVMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETN EKICRATFKAGADAIIVHGFRGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTR PERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDLLNP ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession O26232 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1LOQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 228 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O26232 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 228 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 228 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1LOQ LEU A 1 ? UNP O26232 MET 1 'SEE REMARK 999' 1 1 1 1LOQ CSO A 65 ? UNP O26232 CYS 65 'MODIFIED RESIDUE' 65 2 1 1LOQ PRO A 101 ? UNP O26232 ARG 101 'SEE REMARK 999' 101 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CSO 'L-peptide linking' n S-HYDROXYCYSTEINE ? 'C3 H7 N O3 S' 137.158 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1LOQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 45.06 _exptl_crystal.density_Matthews 2.24 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'trisodium citrate, dioxane, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 25K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2001-03-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 14-BM-C' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 14-BM-C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 1LOQ _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.5 _reflns.number_obs 34387 _reflns.number_all 34387 _reflns.percent_possible_obs 95.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 15.3 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.5 _reflns_shell.d_res_low 1.55 _reflns_shell.percent_possible_all 73.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1LOQ _refine.ls_number_reflns_obs 33965 _refine.ls_number_reflns_all 33965 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF 683106.06 _refine.pdbx_data_cutoff_low_absF 0 _refine.ls_d_res_low 29.89 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs 93.8 _refine.ls_R_factor_obs 0.1730000 _refine.ls_R_factor_all 0.1730000 _refine.ls_R_factor_R_work 0.1730000 _refine.ls_R_factor_R_free 0.1980000 _refine.ls_R_factor_R_free_error 0.004 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.5 _refine.ls_number_reflns_R_free 2538 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 16.6 _refine.aniso_B[1][1] -0.61 _refine.aniso_B[2][2] -3.76 _refine.aniso_B[3][3] 4.37 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.393402 _refine.solvent_model_param_bsol 27.9784 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF 683106.06 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1LOQ _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free 0.17 _refine_analyze.Luzzati_sigma_a_free 0.07 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1583 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 21 _refine_hist.number_atoms_solvent 193 _refine_hist.number_atoms_total 1797 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 29.89 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.6 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.6 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.21 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.59 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.13 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.97 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 4.15 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.50 _refine_ls_shell.d_res_low 1.59 _refine_ls_shell.number_reflns_R_work 4291 _refine_ls_shell.R_factor_R_work 0.1920000 _refine_ls_shell.percent_reflns_obs 76.2 _refine_ls_shell.R_factor_R_free 0.2080000 _refine_ls_shell.R_factor_R_free_error 0.014 _refine_ls_shell.percent_reflns_R_free 5.2 _refine_ls_shell.number_reflns_R_free 235 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 3 U5P.PARAM U5P.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1LOQ _struct.title 'Crystal structure of orotidine monophosphate decarboxylase complexed with product UMP' _struct.pdbx_descriptor 'orotidine monophosphate decarboxylase, (E.C.4.1.1.23)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1LOQ _struct_keywords.pdbx_keywords LYASE _struct_keywords.text 'TIM barrel, Lyase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details 'The second part of the biological dimer is generated by the two fold axis -x, y, -z+1/2' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 23 ? ARG A 35 ? ASN A 23 ARG A 35 1 ? 13 HELX_P HELX_P2 2 GLU A 36 ? ILE A 38 ? GLU A 36 ILE A 38 5 ? 3 HELX_P HELX_P3 3 TYR A 45 ? GLY A 52 ? TYR A 45 GLY A 52 1 ? 8 HELX_P HELX_P4 4 MET A 53 ? GLY A 64 ? MET A 53 GLY A 64 1 ? 12 HELX_P HELX_P5 5 ILE A 76 ? ALA A 90 ? ILE A 76 ALA A 90 1 ? 15 HELX_P HELX_P6 6 GLY A 102 ? GLY A 117 ? GLY A 102 GLY A 117 1 ? 16 HELX_P HELX_P7 7 HIS A 128 ? MET A 133 ? HIS A 128 MET A 133 5 ? 6 HELX_P HELX_P8 8 PHE A 134 ? GLY A 150 ? PHE A 134 GLY A 150 1 ? 17 HELX_P HELX_P9 9 ARG A 160 ? GLY A 172 ? ARG A 160 GLY A 172 1 ? 13 HELX_P HELX_P10 10 ASP A 188 ? LEU A 193 ? ASP A 188 LEU A 193 1 ? 6 HELX_P HELX_P11 11 GLY A 202 ? LEU A 207 ? GLY A 202 LEU A 207 1 ? 6 HELX_P HELX_P12 12 ASN A 210 ? SER A 221 ? ASN A 210 SER A 221 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A GLY 64 C ? ? ? 1_555 A CSO 65 N ? ? A GLY 64 A CSO 65 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale ? ? A CSO 65 C ? ? ? 1_555 A ARG 66 N ? ? A CSO 65 A ARG 66 1_555 ? ? ? ? ? ? ? 1.327 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 9 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel A 8 9 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 15 ? MET A 19 ? LEU A 15 MET A 19 A 2 THR A 40 ? GLY A 44 ? THR A 40 GLY A 44 A 3 ARG A 66 ? VAL A 73 ? ARG A 66 VAL A 73 A 4 ALA A 94 ? HIS A 98 ? ALA A 94 HIS A 98 A 5 GLU A 119 ? LEU A 123 ? GLU A 119 LEU A 123 A 6 ASN A 153 ? VAL A 155 ? ASN A 153 VAL A 155 A 7 PHE A 176 ? SER A 179 ? PHE A 176 SER A 179 A 8 ALA A 198 ? VAL A 201 ? ALA A 198 VAL A 201 A 9 LEU A 15 ? MET A 19 ? LEU A 15 MET A 19 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 17 ? N LEU A 17 O LYS A 42 ? O LYS A 42 A 2 3 N VAL A 41 ? N VAL A 41 O ARG A 66 ? O ARG A 66 A 3 4 N ALA A 69 ? N ALA A 69 O ALA A 94 ? O ALA A 94 A 4 5 N VAL A 97 ? N VAL A 97 O LEU A 123 ? O LEU A 123 A 5 6 N LEU A 122 ? N LEU A 122 O ASN A 153 ? O ASN A 153 A 6 7 N TYR A 154 ? N TYR A 154 O PHE A 176 ? O PHE A 176 A 7 8 N SER A 179 ? N SER A 179 O ILE A 200 ? O ILE A 200 A 8 9 O ILE A 199 ? O ILE A 199 N ILE A 16 ? N ILE A 16 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 19 _struct_site.details 'BINDING SITE FOR RESIDUE U A 2001' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 19 ASP A 20 ? ASP A 20 . ? 1_555 ? 2 AC1 19 LYS A 42 ? LYS A 42 . ? 1_555 ? 3 AC1 19 ASP A 70 ? ASP A 70 . ? 1_555 ? 4 AC1 19 LYS A 72 ? LYS A 72 . ? 1_555 ? 5 AC1 19 ASP A 75 ? ASP A 75 . ? 4_566 ? 6 AC1 19 ILE A 76 ? ILE A 76 . ? 4_566 ? 7 AC1 19 THR A 79 ? THR A 79 . ? 4_566 ? 8 AC1 19 MET A 126 ? MET A 126 . ? 1_555 ? 9 AC1 19 SER A 127 ? SER A 127 . ? 1_555 ? 10 AC1 19 PRO A 180 ? PRO A 180 . ? 1_555 ? 11 AC1 19 GLN A 185 ? GLN A 185 . ? 1_555 ? 12 AC1 19 GLY A 202 ? GLY A 202 . ? 1_555 ? 13 AC1 19 ARG A 203 ? ARG A 203 . ? 1_555 ? 14 AC1 19 HOH C . ? HOH A 3006 . ? 1_555 ? 15 AC1 19 HOH C . ? HOH A 3009 . ? 1_555 ? 16 AC1 19 HOH C . ? HOH A 3011 . ? 1_555 ? 17 AC1 19 HOH C . ? HOH A 3012 . ? 1_555 ? 18 AC1 19 HOH C . ? HOH A 3013 . ? 1_555 ? 19 AC1 19 HOH C . ? HOH A 3014 . ? 1_555 ? # _database_PDB_matrix.entry_id 1LOQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1LOQ _atom_sites.fract_transf_matrix[1][1] 0.017146 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009671 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013526 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 1 ? ? ? A . n A 1 2 ARG 2 2 ? ? ? A . n A 1 3 SER 3 3 ? ? ? A . n A 1 4 ARG 4 4 ? ? ? A . n A 1 5 ARG 5 5 ? ? ? A . n A 1 6 VAL 6 6 ? ? ? A . n A 1 7 ASP 7 7 ? ? ? A . n A 1 8 VAL 8 8 ? ? ? A . n A 1 9 MET 9 9 ? ? ? A . n A 1 10 ASP 10 10 ? ? ? A . n A 1 11 VAL 11 11 ? ? ? A . n A 1 12 MET 12 12 ? ? ? A . n A 1 13 ASN 13 13 ? ? ? A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 ILE 16 16 16 ILE ILE A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 MET 19 19 19 MET MET A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 MET 22 22 22 MET MET A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 ARG 29 29 29 ARG ARG A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 ILE 43 43 43 ILE ILE A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 TYR 45 45 45 TYR TYR A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 MET 53 53 53 MET MET A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 PHE 59 59 59 PHE PHE A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 ARG 62 62 62 ARG ARG A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 CSO 65 65 65 CSO CYO A . n A 1 66 ARG 66 66 66 ARG ARG A . n A 1 67 ILE 67 67 67 ILE ILE A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 CYS 84 84 84 CYS CYS A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 THR 87 87 87 THR THR A . n A 1 88 PHE 88 88 88 PHE PHE A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 ILE 96 96 96 ILE ILE A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 HIS 98 98 98 HIS HIS A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 PRO 101 101 101 PRO PRO A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 SER 105 105 105 SER SER A . n A 1 106 VAL 106 106 106 VAL VAL A . n A 1 107 ARG 107 107 107 ARG ARG A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 CYS 109 109 109 CYS CYS A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 ASN 111 111 111 ASN ASN A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 ALA 113 113 113 ALA ALA A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 MET 116 116 116 MET MET A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 ARG 118 118 118 ARG ARG A . n A 1 119 GLU 119 119 119 GLU GLU A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 PHE 121 121 121 PHE PHE A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 THR 124 124 124 THR THR A . n A 1 125 GLU 125 125 125 GLU GLU A . n A 1 126 MET 126 126 126 MET MET A . n A 1 127 SER 127 127 127 SER SER A . n A 1 128 HIS 128 128 128 HIS HIS A . n A 1 129 PRO 129 129 129 PRO PRO A . n A 1 130 GLY 130 130 130 GLY GLY A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 GLU 132 132 132 GLU GLU A . n A 1 133 MET 133 133 133 MET MET A . n A 1 134 PHE 134 134 134 PHE PHE A . n A 1 135 ILE 135 135 135 ILE ILE A . n A 1 136 GLN 136 136 136 GLN GLN A . n A 1 137 GLY 137 137 137 GLY GLY A . n A 1 138 ALA 138 138 138 ALA ALA A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 ASP 140 140 140 ASP ASP A . n A 1 141 GLU 141 141 141 GLU GLU A . n A 1 142 ILE 142 142 142 ILE ILE A . n A 1 143 ALA 143 143 143 ALA ALA A . n A 1 144 ARG 144 144 144 ARG ARG A . n A 1 145 MET 145 145 145 MET MET A . n A 1 146 GLY 146 146 146 GLY GLY A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 ASP 148 148 148 ASP ASP A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 GLY 150 150 150 GLY GLY A . n A 1 151 VAL 151 151 151 VAL VAL A . n A 1 152 LYS 152 152 152 LYS LYS A . n A 1 153 ASN 153 153 153 ASN ASN A . n A 1 154 TYR 154 154 154 TYR TYR A . n A 1 155 VAL 155 155 155 VAL VAL A . n A 1 156 GLY 156 156 156 GLY GLY A . n A 1 157 PRO 157 157 157 PRO PRO A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 THR 159 159 159 THR THR A . n A 1 160 ARG 160 160 160 ARG ARG A . n A 1 161 PRO 161 161 161 PRO PRO A . n A 1 162 GLU 162 162 162 GLU GLU A . n A 1 163 ARG 163 163 163 ARG ARG A . n A 1 164 LEU 164 164 164 LEU LEU A . n A 1 165 SER 165 165 165 SER SER A . n A 1 166 ARG 166 166 166 ARG ARG A . n A 1 167 LEU 167 167 167 LEU LEU A . n A 1 168 ARG 168 168 168 ARG ARG A . n A 1 169 GLU 169 169 169 GLU GLU A . n A 1 170 ILE 170 170 170 ILE ILE A . n A 1 171 ILE 171 171 171 ILE ILE A . n A 1 172 GLY 172 172 172 GLY GLY A . n A 1 173 GLN 173 173 173 GLN GLN A . n A 1 174 ASP 174 174 174 ASP ASP A . n A 1 175 SER 175 175 175 SER SER A . n A 1 176 PHE 176 176 176 PHE PHE A . n A 1 177 LEU 177 177 177 LEU LEU A . n A 1 178 ILE 178 178 178 ILE ILE A . n A 1 179 SER 179 179 179 SER SER A . n A 1 180 PRO 180 180 180 PRO PRO A . n A 1 181 GLY 181 181 181 GLY GLY A . n A 1 182 VAL 182 182 182 VAL VAL A . n A 1 183 GLY 183 183 183 GLY GLY A . n A 1 184 ALA 184 184 184 ALA ALA A . n A 1 185 GLN 185 185 185 GLN GLN A . n A 1 186 GLY 186 186 186 GLY GLY A . n A 1 187 GLY 187 187 187 GLY GLY A . n A 1 188 ASP 188 188 188 ASP ASP A . n A 1 189 PRO 189 189 189 PRO PRO A . n A 1 190 GLY 190 190 190 GLY GLY A . n A 1 191 GLU 191 191 191 GLU GLU A . n A 1 192 THR 192 192 192 THR THR A . n A 1 193 LEU 193 193 193 LEU LEU A . n A 1 194 ARG 194 194 194 ARG ARG A . n A 1 195 PHE 195 195 195 PHE PHE A . n A 1 196 ALA 196 196 196 ALA ALA A . n A 1 197 ASP 197 197 197 ASP ASP A . n A 1 198 ALA 198 198 198 ALA ALA A . n A 1 199 ILE 199 199 199 ILE ILE A . n A 1 200 ILE 200 200 200 ILE ILE A . n A 1 201 VAL 201 201 201 VAL VAL A . n A 1 202 GLY 202 202 202 GLY GLY A . n A 1 203 ARG 203 203 203 ARG ARG A . n A 1 204 SER 204 204 204 SER SER A . n A 1 205 ILE 205 205 205 ILE ILE A . n A 1 206 TYR 206 206 206 TYR TYR A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 ALA 208 208 208 ALA ALA A . n A 1 209 ASP 209 209 209 ASP ASP A . n A 1 210 ASN 210 210 210 ASN ASN A . n A 1 211 PRO 211 211 211 PRO PRO A . n A 1 212 ALA 212 212 212 ALA ALA A . n A 1 213 ALA 213 213 213 ALA ALA A . n A 1 214 ALA 214 214 214 ALA ALA A . n A 1 215 ALA 215 215 215 ALA ALA A . n A 1 216 ALA 216 216 216 ALA ALA A . n A 1 217 GLY 217 217 217 GLY GLY A . n A 1 218 ILE 218 218 218 ILE ILE A . n A 1 219 ILE 219 219 219 ILE ILE A . n A 1 220 GLU 220 220 220 GLU GLU A . n A 1 221 SER 221 221 221 SER SER A . n A 1 222 ILE 222 222 222 ILE ILE A . n A 1 223 LYS 223 223 ? ? ? A . n A 1 224 ASP 224 224 ? ? ? A . n A 1 225 LEU 225 225 ? ? ? A . n A 1 226 LEU 226 226 ? ? ? A . n A 1 227 ASN 227 227 ? ? ? A . n A 1 228 PRO 228 228 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 U 1 2001 2001 U UMP A . C 3 HOH 1 3001 3001 HOH TIP A . C 3 HOH 2 3002 3002 HOH TIP A . C 3 HOH 3 3003 3003 HOH TIP A . C 3 HOH 4 3004 3004 HOH TIP A . C 3 HOH 5 3005 3005 HOH TIP A . C 3 HOH 6 3006 3006 HOH TIP A . C 3 HOH 7 3007 3007 HOH TIP A . C 3 HOH 8 3008 3008 HOH TIP A . C 3 HOH 9 3009 3009 HOH TIP A . C 3 HOH 10 3010 3010 HOH TIP A . C 3 HOH 11 3011 3011 HOH TIP A . C 3 HOH 12 3012 3012 HOH TIP A . C 3 HOH 13 3013 3013 HOH TIP A . C 3 HOH 14 3014 3014 HOH TIP A . C 3 HOH 15 3015 3015 HOH TIP A . C 3 HOH 16 3016 3016 HOH TIP A . C 3 HOH 17 3017 3017 HOH TIP A . C 3 HOH 18 3018 3018 HOH TIP A . C 3 HOH 19 3019 3019 HOH TIP A . C 3 HOH 20 3020 3020 HOH TIP A . C 3 HOH 21 3021 3021 HOH TIP A . C 3 HOH 22 3022 3022 HOH TIP A . C 3 HOH 23 3023 3023 HOH TIP A . C 3 HOH 24 3024 3024 HOH TIP A . C 3 HOH 25 3025 3025 HOH TIP A . C 3 HOH 26 3026 3026 HOH TIP A . C 3 HOH 27 3027 3027 HOH TIP A . C 3 HOH 28 3028 3028 HOH TIP A . C 3 HOH 29 3029 3029 HOH TIP A . C 3 HOH 30 3030 3030 HOH TIP A . C 3 HOH 31 3031 3031 HOH TIP A . C 3 HOH 32 3032 3032 HOH TIP A . C 3 HOH 33 3033 3033 HOH TIP A . C 3 HOH 34 3034 3034 HOH TIP A . C 3 HOH 35 3035 3035 HOH TIP A . C 3 HOH 36 3036 3036 HOH TIP A . C 3 HOH 37 3037 3037 HOH TIP A . C 3 HOH 38 3038 3038 HOH TIP A . C 3 HOH 39 3039 3039 HOH TIP A . C 3 HOH 40 3040 3040 HOH TIP A . C 3 HOH 41 3041 3041 HOH TIP A . C 3 HOH 42 3042 3042 HOH TIP A . C 3 HOH 43 3043 3043 HOH TIP A . C 3 HOH 44 3044 3044 HOH TIP A . C 3 HOH 45 3045 3045 HOH TIP A . C 3 HOH 46 3046 3046 HOH TIP A . C 3 HOH 47 3047 3047 HOH TIP A . C 3 HOH 48 3048 3048 HOH TIP A . C 3 HOH 49 3049 3049 HOH TIP A . C 3 HOH 50 3050 3050 HOH TIP A . C 3 HOH 51 3051 3051 HOH TIP A . C 3 HOH 52 3052 3052 HOH TIP A . C 3 HOH 53 3053 3053 HOH TIP A . C 3 HOH 54 3054 3054 HOH TIP A . C 3 HOH 55 3055 3055 HOH TIP A . C 3 HOH 56 3056 3056 HOH TIP A . C 3 HOH 57 3057 3057 HOH TIP A . C 3 HOH 58 3058 3058 HOH TIP A . C 3 HOH 59 3059 3059 HOH TIP A . C 3 HOH 60 3060 3060 HOH TIP A . C 3 HOH 61 3061 3061 HOH TIP A . C 3 HOH 62 3062 3062 HOH TIP A . C 3 HOH 63 3063 3063 HOH TIP A . C 3 HOH 64 3064 3064 HOH TIP A . C 3 HOH 65 3065 3065 HOH TIP A . C 3 HOH 66 3066 3066 HOH TIP A . C 3 HOH 67 3067 3067 HOH TIP A . C 3 HOH 68 3068 3068 HOH TIP A . C 3 HOH 69 3069 3069 HOH TIP A . C 3 HOH 70 3070 3070 HOH TIP A . C 3 HOH 71 3071 3071 HOH TIP A . C 3 HOH 72 3072 3072 HOH TIP A . C 3 HOH 73 3073 3073 HOH TIP A . C 3 HOH 74 3074 3074 HOH TIP A . C 3 HOH 75 3075 3075 HOH TIP A . C 3 HOH 76 3076 3076 HOH TIP A . C 3 HOH 77 3077 3077 HOH TIP A . C 3 HOH 78 3078 3078 HOH TIP A . C 3 HOH 79 3079 3079 HOH TIP A . C 3 HOH 80 3080 3080 HOH TIP A . C 3 HOH 81 3081 3081 HOH TIP A . C 3 HOH 82 3082 3082 HOH TIP A . C 3 HOH 83 3083 3083 HOH TIP A . C 3 HOH 84 3084 3084 HOH TIP A . C 3 HOH 85 3085 3085 HOH TIP A . C 3 HOH 86 3086 3086 HOH TIP A . C 3 HOH 87 3087 3087 HOH TIP A . C 3 HOH 88 3088 3088 HOH TIP A . C 3 HOH 89 3089 3089 HOH TIP A . C 3 HOH 90 3090 3090 HOH TIP A . C 3 HOH 91 3091 3091 HOH TIP A . C 3 HOH 92 3092 3092 HOH TIP A . C 3 HOH 93 3093 3093 HOH TIP A . C 3 HOH 94 3094 3094 HOH TIP A . C 3 HOH 95 3095 3095 HOH TIP A . C 3 HOH 96 3096 3096 HOH TIP A . C 3 HOH 97 3097 3097 HOH TIP A . C 3 HOH 98 3098 3098 HOH TIP A . C 3 HOH 99 3099 3099 HOH TIP A . C 3 HOH 100 3100 3100 HOH TIP A . C 3 HOH 101 3101 3101 HOH TIP A . C 3 HOH 102 3102 3102 HOH TIP A . C 3 HOH 103 3103 3103 HOH TIP A . C 3 HOH 104 3104 3104 HOH TIP A . C 3 HOH 105 3105 3105 HOH TIP A . C 3 HOH 106 3106 3106 HOH TIP A . C 3 HOH 107 3107 3107 HOH TIP A . C 3 HOH 108 3108 3108 HOH TIP A . C 3 HOH 109 3109 3109 HOH TIP A . C 3 HOH 110 3110 3110 HOH TIP A . C 3 HOH 111 3111 3111 HOH TIP A . C 3 HOH 112 3112 3112 HOH TIP A . C 3 HOH 113 3113 3113 HOH TIP A . C 3 HOH 114 3114 3114 HOH TIP A . C 3 HOH 115 3115 3115 HOH TIP A . C 3 HOH 116 3116 3116 HOH TIP A . C 3 HOH 117 3117 3117 HOH TIP A . C 3 HOH 118 3118 3118 HOH TIP A . C 3 HOH 119 3119 3119 HOH TIP A . C 3 HOH 120 3120 3120 HOH TIP A . C 3 HOH 121 3121 3121 HOH TIP A . C 3 HOH 122 3122 3122 HOH TIP A . C 3 HOH 123 3123 3123 HOH TIP A . C 3 HOH 124 3124 3124 HOH TIP A . C 3 HOH 125 3125 3125 HOH TIP A . C 3 HOH 126 3126 3126 HOH TIP A . C 3 HOH 127 3127 3127 HOH TIP A . C 3 HOH 128 3128 3128 HOH TIP A . C 3 HOH 129 3129 3129 HOH TIP A . C 3 HOH 130 3130 3130 HOH TIP A . C 3 HOH 131 3131 3131 HOH TIP A . C 3 HOH 132 3132 3132 HOH TIP A . C 3 HOH 133 3133 3133 HOH TIP A . C 3 HOH 134 3134 3134 HOH TIP A . C 3 HOH 135 3135 3135 HOH TIP A . C 3 HOH 136 3136 3136 HOH TIP A . C 3 HOH 137 3137 3137 HOH TIP A . C 3 HOH 138 3138 3138 HOH TIP A . C 3 HOH 139 3139 3139 HOH TIP A . C 3 HOH 140 3140 3140 HOH TIP A . C 3 HOH 141 3141 3141 HOH TIP A . C 3 HOH 142 3142 3142 HOH TIP A . C 3 HOH 143 3143 3143 HOH TIP A . C 3 HOH 144 3144 3144 HOH TIP A . C 3 HOH 145 3145 3145 HOH TIP A . C 3 HOH 146 3146 3146 HOH TIP A . C 3 HOH 147 3147 3147 HOH TIP A . C 3 HOH 148 3148 3148 HOH TIP A . C 3 HOH 149 3149 3149 HOH TIP A . C 3 HOH 150 3150 3150 HOH TIP A . C 3 HOH 151 3151 3151 HOH TIP A . C 3 HOH 152 3152 3152 HOH TIP A . C 3 HOH 153 3153 3153 HOH TIP A . C 3 HOH 154 3154 3154 HOH TIP A . C 3 HOH 155 3155 3155 HOH TIP A . C 3 HOH 156 3156 3156 HOH TIP A . C 3 HOH 157 3157 3157 HOH TIP A . C 3 HOH 158 3158 3158 HOH TIP A . C 3 HOH 159 3159 3159 HOH TIP A . C 3 HOH 160 3160 3160 HOH TIP A . C 3 HOH 161 3161 3161 HOH TIP A . C 3 HOH 162 3162 3162 HOH TIP A . C 3 HOH 163 3163 3163 HOH TIP A . C 3 HOH 164 3164 3164 HOH TIP A . C 3 HOH 165 3165 3165 HOH TIP A . C 3 HOH 166 3166 3166 HOH TIP A . C 3 HOH 167 3167 3167 HOH TIP A . C 3 HOH 168 3168 3168 HOH TIP A . C 3 HOH 169 3169 3169 HOH TIP A . C 3 HOH 170 3170 3170 HOH TIP A . C 3 HOH 171 3171 3171 HOH TIP A . C 3 HOH 172 3172 3172 HOH TIP A . C 3 HOH 173 3173 3173 HOH TIP A . C 3 HOH 174 3174 3174 HOH TIP A . C 3 HOH 175 3175 3175 HOH TIP A . C 3 HOH 176 3176 3176 HOH TIP A . C 3 HOH 177 3177 3177 HOH TIP A . C 3 HOH 178 3178 3178 HOH TIP A . C 3 HOH 179 3179 3179 HOH TIP A . C 3 HOH 180 3180 3180 HOH TIP A . C 3 HOH 181 3181 3181 HOH TIP A . C 3 HOH 182 3182 3182 HOH TIP A . C 3 HOH 183 3183 3183 HOH TIP A . C 3 HOH 184 3184 3184 HOH TIP A . C 3 HOH 185 3185 3185 HOH TIP A . C 3 HOH 186 3186 3186 HOH TIP A . C 3 HOH 187 3187 3187 HOH TIP A . C 3 HOH 188 3188 3188 HOH TIP A . C 3 HOH 189 3189 3189 HOH TIP A . C 3 HOH 190 3190 3190 HOH TIP A . C 3 HOH 191 3191 3191 HOH TIP A . C 3 HOH 192 3192 3192 HOH TIP A . C 3 HOH 193 3193 3193 HOH TIP A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id CSO _pdbx_struct_mod_residue.label_seq_id 65 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id CSO _pdbx_struct_mod_residue.auth_seq_id 65 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id CYS _pdbx_struct_mod_residue.details S-HYDROXYCYSTEINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 software_defined_assembly PISA,PQS dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,B,C 2 1,3 A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 3310 ? 2 MORE -27 ? 2 'SSA (A^2)' 15320 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_656 -x+1,y,-z+3/2 -1.0000000000 0.0000000000 0.0000000000 58.3220000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 110.8965000000 3 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 103.4050000000 0.0000000000 0.0000000000 -1.0000000000 73.9310000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 3001 ? C HOH . 2 1 A HOH 3015 ? C HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-08-07 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-01-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Experimental preparation' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category exptl_crystal_grow # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 4 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_exptl_crystal_grow.temp' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement . ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;sequence Authors state that although residue 1 is MET and residue 101 is ARG according to the SwissProt entry, residue 1 was LEU and residue 101 was PRO in the original construct cloned of MT genomic DNA. ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE2 A GLU 78 ? ? O A HOH 3184 ? ? 1.58 2 1 N A ARG 14 ? ? O A HOH 3185 ? ? 1.62 3 1 OE2 A GLU 125 ? ? O A HOH 3182 ? ? 1.63 4 1 OE2 A GLU 115 ? ? O A HOH 3186 ? ? 2.16 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 NH1 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 ARG _pdbx_validate_symm_contact.auth_seq_id_1 144 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 NH1 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 ARG _pdbx_validate_symm_contact.auth_seq_id_2 144 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_756 _pdbx_validate_symm_contact.dist 2.01 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 74 ? ? -148.71 49.66 2 1 PHE A 134 ? ? -132.26 -38.16 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LEU 1 ? A LEU 1 2 1 Y 1 A ARG 2 ? A ARG 2 3 1 Y 1 A SER 3 ? A SER 3 4 1 Y 1 A ARG 4 ? A ARG 4 5 1 Y 1 A ARG 5 ? A ARG 5 6 1 Y 1 A VAL 6 ? A VAL 6 7 1 Y 1 A ASP 7 ? A ASP 7 8 1 Y 1 A VAL 8 ? A VAL 8 9 1 Y 1 A MET 9 ? A MET 9 10 1 Y 1 A ASP 10 ? A ASP 10 11 1 Y 1 A VAL 11 ? A VAL 11 12 1 Y 1 A MET 12 ? A MET 12 13 1 Y 1 A ASN 13 ? A ASN 13 14 1 Y 1 A LYS 223 ? A LYS 223 15 1 Y 1 A ASP 224 ? A ASP 224 16 1 Y 1 A LEU 225 ? A LEU 225 17 1 Y 1 A LEU 226 ? A LEU 226 18 1 Y 1 A ASN 227 ? A ASN 227 19 1 Y 1 A PRO 228 ? A PRO 228 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "URIDINE-5'-MONOPHOSPHATE" U 3 water HOH #