data_1LSV # _entry.id 1LSV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1LSV pdb_00001lsv 10.2210/pdb1lsv/pdb RCSB RCSB016249 ? ? WWPDB D_1000016249 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-11-20 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 4 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 5 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 6 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 7 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 9 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 10 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 11 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 12 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 13 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 14 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 15 4 'Structure model' '_struct_ref_seq_dif.details' 16 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 17 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 18 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1LSV _pdbx_database_status.recvd_initial_deposition_date 2002-05-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1DP6 'Oxygen-Binding Complex Of Fixl Heme Domain' unspecified PDB 1DP8 'Crystal Structure Of The Nitric Oxide Bound Fixl Heme Domain' unspecified PDB 1DP9 'Crystal Structure Of Imidazole-Bound Fixl Heme Domain' unspecified PDB 1DRM 'Crystal Structure Of The Ligand Free Bjfixl Heme Domain' unspecified PDB 1LSW 'Crystal structure of the ferrous BjFixL heme domain' unspecified PDB 1LSX 'Crystal structure of the methylimidazole-bound BjFixL heme domain' unspecified PDB 1LT0 'Crystal structure of the CN-bound BjFixL heme domain' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hao, B.' 1 'Isaza, C.' 2 'Arndt, J.' 3 'Soltis, M.' 4 'Chan, M.K.' 5 # _citation.id primary _citation.title ;Structure-based mechanism of O2 sensing and ligand discrimination by the FixL heme domain of Bradyrhizobium japonicum ; _citation.journal_abbrev Biochemistry _citation.journal_volume 41 _citation.page_first 12952 _citation.page_last 12958 _citation.year 2002 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12390021 _citation.pdbx_database_id_DOI 10.1021/bi020144l # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hao, B.' 1 ? primary 'Isaza, C.' 2 ? primary 'Arndt, J.' 3 ? primary 'Soltis, M.' 4 ? primary 'Chan, M.K.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Sensor protein FixL' 14919.858 1 2.7.3.- ? 'Heme domain (residues 141-270)' ? 2 non-polymer syn 'PROTOPORPHYRIN IX CONTAINING FE' 616.487 1 ? ? ? ? 3 non-polymer syn 'CARBON MONOXIDE' 28.010 1 ? ? ? ? 4 water nat water 18.015 38 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MRETHLRSILHTIPDAMIVIDGHGIIQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRHDSYISRYRTTSDPHIIGIG RIVTGKRRDGTTFPMHLSIGEMQSGGEPYFTGFVRDLTEHQQTQARLQELQ ; _entity_poly.pdbx_seq_one_letter_code_can ;MRETHLRSILHTIPDAMIVIDGHGIIQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRHDSYISRYRTTSDPHIIGIG RIVTGKRRDGTTFPMHLSIGEMQSGGEPYFTGFVRDLTEHQQTQARLQELQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PROTOPORPHYRIN IX CONTAINING FE' HEM 3 'CARBON MONOXIDE' CMO 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 GLU n 1 4 THR n 1 5 HIS n 1 6 LEU n 1 7 ARG n 1 8 SER n 1 9 ILE n 1 10 LEU n 1 11 HIS n 1 12 THR n 1 13 ILE n 1 14 PRO n 1 15 ASP n 1 16 ALA n 1 17 MET n 1 18 ILE n 1 19 VAL n 1 20 ILE n 1 21 ASP n 1 22 GLY n 1 23 HIS n 1 24 GLY n 1 25 ILE n 1 26 ILE n 1 27 GLN n 1 28 LEU n 1 29 PHE n 1 30 SER n 1 31 THR n 1 32 ALA n 1 33 ALA n 1 34 GLU n 1 35 ARG n 1 36 LEU n 1 37 PHE n 1 38 GLY n 1 39 TRP n 1 40 SER n 1 41 GLU n 1 42 LEU n 1 43 GLU n 1 44 ALA n 1 45 ILE n 1 46 GLY n 1 47 GLN n 1 48 ASN n 1 49 VAL n 1 50 ASN n 1 51 ILE n 1 52 LEU n 1 53 MET n 1 54 PRO n 1 55 GLU n 1 56 PRO n 1 57 ASP n 1 58 ARG n 1 59 SER n 1 60 ARG n 1 61 HIS n 1 62 ASP n 1 63 SER n 1 64 TYR n 1 65 ILE n 1 66 SER n 1 67 ARG n 1 68 TYR n 1 69 ARG n 1 70 THR n 1 71 THR n 1 72 SER n 1 73 ASP n 1 74 PRO n 1 75 HIS n 1 76 ILE n 1 77 ILE n 1 78 GLY n 1 79 ILE n 1 80 GLY n 1 81 ARG n 1 82 ILE n 1 83 VAL n 1 84 THR n 1 85 GLY n 1 86 LYS n 1 87 ARG n 1 88 ARG n 1 89 ASP n 1 90 GLY n 1 91 THR n 1 92 THR n 1 93 PHE n 1 94 PRO n 1 95 MET n 1 96 HIS n 1 97 LEU n 1 98 SER n 1 99 ILE n 1 100 GLY n 1 101 GLU n 1 102 MET n 1 103 GLN n 1 104 SER n 1 105 GLY n 1 106 GLY n 1 107 GLU n 1 108 PRO n 1 109 TYR n 1 110 PHE n 1 111 THR n 1 112 GLY n 1 113 PHE n 1 114 VAL n 1 115 ARG n 1 116 ASP n 1 117 LEU n 1 118 THR n 1 119 GLU n 1 120 HIS n 1 121 GLN n 1 122 GLN n 1 123 THR n 1 124 GLN n 1 125 ALA n 1 126 ARG n 1 127 LEU n 1 128 GLN n 1 129 GLU n 1 130 LEU n 1 131 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Bradyrhizobium _entity_src_gen.pdbx_gene_src_gene FixL _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bradyrhizobium japonicum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 375 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain TG1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pBH32 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CMO non-polymer . 'CARBON MONOXIDE' ? 'C O' 28.010 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEM non-polymer . 'PROTOPORPHYRIN IX CONTAINING FE' HEME 'C34 H32 Fe N4 O4' 616.487 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 140 ? ? ? A . n A 1 2 ARG 2 141 ? ? ? A . n A 1 3 GLU 3 142 ? ? ? A . n A 1 4 THR 4 143 ? ? ? A . n A 1 5 HIS 5 144 ? ? ? A . n A 1 6 LEU 6 145 ? ? ? A . n A 1 7 ARG 7 146 ? ? ? A . n A 1 8 SER 8 147 ? ? ? A . n A 1 9 ILE 9 148 ? ? ? A . n A 1 10 LEU 10 149 ? ? ? A . n A 1 11 HIS 11 150 ? ? ? A . n A 1 12 THR 12 151 ? ? ? A . n A 1 13 ILE 13 152 ? ? ? A . n A 1 14 PRO 14 153 ? ? ? A . n A 1 15 ASP 15 154 154 ASP ASP A . n A 1 16 ALA 16 155 155 ALA ALA A . n A 1 17 MET 17 156 156 MET MET A . n A 1 18 ILE 18 157 157 ILE ILE A . n A 1 19 VAL 19 158 158 VAL VAL A . n A 1 20 ILE 20 159 159 ILE ILE A . n A 1 21 ASP 21 160 160 ASP ASP A . n A 1 22 GLY 22 161 161 GLY GLY A . n A 1 23 HIS 23 162 162 HIS HIS A . n A 1 24 GLY 24 163 163 GLY GLY A . n A 1 25 ILE 25 164 164 ILE ILE A . n A 1 26 ILE 26 165 165 ILE ILE A . n A 1 27 GLN 27 166 166 GLN GLN A . n A 1 28 LEU 28 167 167 LEU LEU A . n A 1 29 PHE 29 168 168 PHE PHE A . n A 1 30 SER 30 169 169 SER SER A . n A 1 31 THR 31 170 170 THR THR A . n A 1 32 ALA 32 171 171 ALA ALA A . n A 1 33 ALA 33 172 172 ALA ALA A . n A 1 34 GLU 34 173 173 GLU GLU A . n A 1 35 ARG 35 174 174 ARG ARG A . n A 1 36 LEU 36 175 175 LEU LEU A . n A 1 37 PHE 37 176 176 PHE PHE A . n A 1 38 GLY 38 177 177 GLY GLY A . n A 1 39 TRP 39 178 178 TRP TRP A . n A 1 40 SER 40 179 179 SER SER A . n A 1 41 GLU 41 180 180 GLU GLU A . n A 1 42 LEU 42 181 181 LEU LEU A . n A 1 43 GLU 43 182 182 GLU GLU A . n A 1 44 ALA 44 183 183 ALA ALA A . n A 1 45 ILE 45 184 184 ILE ILE A . n A 1 46 GLY 46 185 185 GLY GLY A . n A 1 47 GLN 47 186 186 GLN GLN A . n A 1 48 ASN 48 187 187 ASN ASN A . n A 1 49 VAL 49 188 188 VAL VAL A . n A 1 50 ASN 50 189 189 ASN ASN A . n A 1 51 ILE 51 190 190 ILE ILE A . n A 1 52 LEU 52 191 191 LEU LEU A . n A 1 53 MET 53 192 192 MET MET A . n A 1 54 PRO 54 193 193 PRO PRO A . n A 1 55 GLU 55 194 194 GLU GLU A . n A 1 56 PRO 56 195 195 PRO PRO A . n A 1 57 ASP 57 196 196 ASP ASP A . n A 1 58 ARG 58 197 197 ARG ARG A . n A 1 59 SER 59 198 198 SER SER A . n A 1 60 ARG 60 199 199 ARG ARG A . n A 1 61 HIS 61 200 200 HIS HIS A . n A 1 62 ASP 62 201 201 ASP ASP A . n A 1 63 SER 63 202 202 SER SER A . n A 1 64 TYR 64 203 203 TYR TYR A . n A 1 65 ILE 65 204 204 ILE ILE A . n A 1 66 SER 66 205 205 SER SER A . n A 1 67 ARG 67 206 206 ARG ARG A . n A 1 68 TYR 68 207 207 TYR TYR A . n A 1 69 ARG 69 208 208 ARG ARG A . n A 1 70 THR 70 209 209 THR THR A . n A 1 71 THR 71 210 210 THR THR A . n A 1 72 SER 72 211 211 SER SER A . n A 1 73 ASP 73 212 212 ASP ASP A . n A 1 74 PRO 74 213 213 PRO PRO A . n A 1 75 HIS 75 214 214 HIS HIS A . n A 1 76 ILE 76 215 215 ILE ILE A . n A 1 77 ILE 77 216 216 ILE ILE A . n A 1 78 GLY 78 217 217 GLY GLY A . n A 1 79 ILE 79 218 218 ILE ILE A . n A 1 80 GLY 80 219 219 GLY GLY A . n A 1 81 ARG 81 220 220 ARG ARG A . n A 1 82 ILE 82 221 221 ILE ILE A . n A 1 83 VAL 83 222 222 VAL VAL A . n A 1 84 THR 84 223 223 THR THR A . n A 1 85 GLY 85 224 224 GLY GLY A . n A 1 86 LYS 86 225 225 LYS LYS A . n A 1 87 ARG 87 226 226 ARG ARG A . n A 1 88 ARG 88 227 227 ARG ARG A . n A 1 89 ASP 89 228 228 ASP ASP A . n A 1 90 GLY 90 229 229 GLY GLY A . n A 1 91 THR 91 230 230 THR THR A . n A 1 92 THR 92 231 231 THR THR A . n A 1 93 PHE 93 232 232 PHE PHE A . n A 1 94 PRO 94 233 233 PRO PRO A . n A 1 95 MET 95 234 234 MET MET A . n A 1 96 HIS 96 235 235 HIS HIS A . n A 1 97 LEU 97 236 236 LEU LEU A . n A 1 98 SER 98 237 237 SER SER A . n A 1 99 ILE 99 238 238 ILE ILE A . n A 1 100 GLY 100 239 239 GLY GLY A . n A 1 101 GLU 101 240 240 GLU GLU A . n A 1 102 MET 102 241 241 MET MET A . n A 1 103 GLN 103 242 242 GLN GLN A . n A 1 104 SER 104 243 243 SER SER A . n A 1 105 GLY 105 244 244 GLY GLY A . n A 1 106 GLY 106 245 245 GLY GLY A . n A 1 107 GLU 107 246 246 GLU GLU A . n A 1 108 PRO 108 247 247 PRO PRO A . n A 1 109 TYR 109 248 248 TYR TYR A . n A 1 110 PHE 110 249 249 PHE PHE A . n A 1 111 THR 111 250 250 THR THR A . n A 1 112 GLY 112 251 251 GLY GLY A . n A 1 113 PHE 113 252 252 PHE PHE A . n A 1 114 VAL 114 253 253 VAL VAL A . n A 1 115 ARG 115 254 254 ARG ALA A . n A 1 116 ASP 116 255 255 ASP ASP A . n A 1 117 LEU 117 256 256 LEU LEU A . n A 1 118 THR 118 257 257 THR THR A . n A 1 119 GLU 119 258 258 GLU GLU A . n A 1 120 HIS 120 259 259 HIS HIS A . n A 1 121 GLN 121 260 260 GLN GLN A . n A 1 122 GLN 122 261 261 GLN GLN A . n A 1 123 THR 123 262 262 THR THR A . n A 1 124 GLN 124 263 263 GLN GLN A . n A 1 125 ALA 125 264 264 ALA ALA A . n A 1 126 ARG 126 265 265 ARG ARG A . n A 1 127 LEU 127 266 266 LEU LEU A . n A 1 128 GLN 128 267 267 GLN GLN A . n A 1 129 GLU 129 268 268 GLU GLU A . n A 1 130 LEU 130 269 269 LEU LEU A . n A 1 131 GLN 131 270 270 GLN GLN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM 1 719 719 HEM HEM A . C 3 CMO 1 500 500 CMO CM A . D 4 HOH 1 1 1 HOH TIP A . D 4 HOH 2 2 2 HOH TIP A . D 4 HOH 3 3 3 HOH TIP A . D 4 HOH 4 5 5 HOH TIP A . D 4 HOH 5 6 6 HOH TIP A . D 4 HOH 6 7 7 HOH TIP A . D 4 HOH 7 8 8 HOH TIP A . D 4 HOH 8 9 9 HOH TIP A . D 4 HOH 9 10 10 HOH TIP A . D 4 HOH 10 11 11 HOH TIP A . D 4 HOH 11 14 14 HOH TIP A . D 4 HOH 12 15 15 HOH TIP A . D 4 HOH 13 16 16 HOH TIP A . D 4 HOH 14 17 17 HOH TIP A . D 4 HOH 15 18 18 HOH TIP A . D 4 HOH 16 19 19 HOH TIP A . D 4 HOH 17 20 20 HOH TIP A . D 4 HOH 18 21 21 HOH TIP A . D 4 HOH 19 22 22 HOH TIP A . D 4 HOH 20 23 23 HOH TIP A . D 4 HOH 21 25 25 HOH TIP A . D 4 HOH 22 26 26 HOH TIP A . D 4 HOH 23 27 27 HOH TIP A . D 4 HOH 24 28 28 HOH TIP A . D 4 HOH 25 29 29 HOH TIP A . D 4 HOH 26 31 31 HOH TIP A . D 4 HOH 27 32 32 HOH TIP A . D 4 HOH 28 33 33 HOH TIP A . D 4 HOH 29 34 34 HOH TIP A . D 4 HOH 30 36 36 HOH TIP A . D 4 HOH 31 37 37 HOH TIP A . D 4 HOH 32 38 38 HOH TIP A . D 4 HOH 33 39 39 HOH TIP A . D 4 HOH 34 40 40 HOH TIP A . D 4 HOH 35 42 42 HOH TIP A . D 4 HOH 36 45 45 HOH TIP A . D 4 HOH 37 46 46 HOH TIP A . D 4 HOH 38 50 50 HOH TIP A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 254 ? CG ? A ARG 115 CG 2 1 Y 1 A ARG 254 ? CD ? A ARG 115 CD 3 1 Y 1 A ARG 254 ? NE ? A ARG 115 NE 4 1 Y 1 A ARG 254 ? CZ ? A ARG 115 CZ 5 1 Y 1 A ARG 254 ? NH1 ? A ARG 115 NH1 6 1 Y 1 A ARG 254 ? NH2 ? A ARG 115 NH2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 X-PLOR 'model building' . ? 3 X-PLOR refinement 3.851 ? 4 X-PLOR phasing . ? 5 # _cell.entry_id 1LSV _cell.length_a 127.01 _cell.length_b 127.01 _cell.length_c 58.14 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LSV _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 # _exptl.entry_id 1LSV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 59.31 _exptl_crystal.density_Matthews 3.02 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'SODIUM CHLORIDE, MPD, HEPS, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2001-02-10 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9790 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9790 # _reflns.entry_id 1LSV _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.0 _reflns.d_resolution_high 2.4 _reflns.d_resolution_low 20.0 _reflns.number_all 45212 _reflns.number_obs 45178 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.044 _reflns.pdbx_Rsym_value 0.044 _reflns.pdbx_netI_over_sigmaI 14.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.40 _reflns_shell.d_res_low 2.44 _reflns_shell.percent_possible_all 96.6 _reflns_shell.Rmerge_I_obs 0.315 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 6.8 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 364 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1LSV _refine.ls_d_res_high 2.40 _refine.ls_d_res_low 20.0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 7132 _refine.ls_number_reflns_obs 7120 _refine.ls_number_reflns_R_free 614 _refine.ls_percent_reflns_obs 99.8 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.215 _refine.ls_R_factor_R_free 0.251 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_starting_model 'PDB ENTRY 1DRM' _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model Isotropic _refine.B_iso_mean 20.6 _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 923 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 38 _refine_hist.number_atoms_total 1006 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 20.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_angle_deg 1.68 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.40 _refine_ls_shell.d_res_low 2.51 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.196 _refine_ls_shell.percent_reflns_obs 99.8 _refine_ls_shell.R_factor_R_free 0.274 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 85 _refine_ls_shell.number_reflns_obs 875 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1LSV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1LSV _struct.title 'Crystal structure of the CO-bound BjFixL heme domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1LSV _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'PAS fold, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FIXL_BRAJA _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RETHLRSILHTIPDAMIVIDGHGIIQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRHDSYISRYRTTSDPHIIGIGR IVTGKRRDGTTFPMHLSIGEMQSGGEPYFTGFVRDLTEHQQTQARLQELQ ; _struct_ref.pdbx_align_begin 141 _struct_ref.pdbx_db_accession P23222 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1LSV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 131 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P23222 _struct_ref_seq.db_align_beg 141 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 270 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 141 _struct_ref_seq.pdbx_auth_seq_align_end 270 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1LSV _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P23222 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'initiating methionine' _struct_ref_seq_dif.pdbx_auth_seq_num 140 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 30 ? GLY A 38 ? SER A 169 GLY A 177 1 ? 9 HELX_P HELX_P2 2 SER A 40 ? ILE A 45 ? SER A 179 ILE A 184 1 ? 6 HELX_P HELX_P3 3 ASN A 48 ? MET A 53 ? ASN A 187 MET A 192 5 ? 6 HELX_P HELX_P4 4 PRO A 56 ? SER A 72 ? PRO A 195 SER A 211 1 ? 17 HELX_P HELX_P5 5 LEU A 117 ? LEU A 130 ? LEU A 256 LEU A 269 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 61 NE2 ? ? ? 1_555 B HEM . FE ? ? A HIS 200 A HEM 719 1_555 ? ? ? ? ? ? ? 2.074 ? ? metalc2 metalc ? ? C CMO . C ? ? ? 1_555 B HEM . FE ? ? A CMO 500 A HEM 719 1_555 ? ? ? ? ? ? ? 1.975 ? ? metalc3 metalc ? ? C CMO . O ? ? ? 1_555 B HEM . FE ? ? A CMO 500 A HEM 719 1_555 ? ? ? ? ? ? ? 2.968 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 61 ? A HIS 200 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 NA ? B HEM . ? A HEM 719 ? 1_555 94.7 ? 2 NE2 ? A HIS 61 ? A HIS 200 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 NB ? B HEM . ? A HEM 719 ? 1_555 89.4 ? 3 NA ? B HEM . ? A HEM 719 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 NB ? B HEM . ? A HEM 719 ? 1_555 90.8 ? 4 NE2 ? A HIS 61 ? A HIS 200 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 NC ? B HEM . ? A HEM 719 ? 1_555 89.6 ? 5 NA ? B HEM . ? A HEM 719 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 NC ? B HEM . ? A HEM 719 ? 1_555 175.7 ? 6 NB ? B HEM . ? A HEM 719 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 NC ? B HEM . ? A HEM 719 ? 1_555 88.8 ? 7 NE2 ? A HIS 61 ? A HIS 200 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 ND ? B HEM . ? A HEM 719 ? 1_555 88.3 ? 8 NA ? B HEM . ? A HEM 719 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 ND ? B HEM . ? A HEM 719 ? 1_555 91.6 ? 9 NB ? B HEM . ? A HEM 719 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 ND ? B HEM . ? A HEM 719 ? 1_555 176.8 ? 10 NC ? B HEM . ? A HEM 719 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 ND ? B HEM . ? A HEM 719 ? 1_555 89.0 ? 11 NE2 ? A HIS 61 ? A HIS 200 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 C ? C CMO . ? A CMO 500 ? 1_555 174.4 ? 12 NA ? B HEM . ? A HEM 719 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 C ? C CMO . ? A CMO 500 ? 1_555 79.8 ? 13 NB ? B HEM . ? A HEM 719 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 C ? C CMO . ? A CMO 500 ? 1_555 89.8 ? 14 NC ? B HEM . ? A HEM 719 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 C ? C CMO . ? A CMO 500 ? 1_555 95.9 ? 15 ND ? B HEM . ? A HEM 719 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 C ? C CMO . ? A CMO 500 ? 1_555 92.7 ? 16 NE2 ? A HIS 61 ? A HIS 200 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 O ? C CMO . ? A CMO 500 ? 1_555 176.7 ? 17 NA ? B HEM . ? A HEM 719 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 O ? C CMO . ? A CMO 500 ? 1_555 87.1 ? 18 NB ? B HEM . ? A HEM 719 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 O ? C CMO . ? A CMO 500 ? 1_555 93.3 ? 19 NC ? B HEM . ? A HEM 719 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 O ? C CMO . ? A CMO 500 ? 1_555 88.6 ? 20 ND ? B HEM . ? A HEM 719 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 O ? C CMO . ? A CMO 500 ? 1_555 88.9 ? 21 C ? C CMO . ? A CMO 500 ? 1_555 FE ? B HEM . ? A HEM 719 ? 1_555 O ? C CMO . ? A CMO 500 ? 1_555 8.1 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 55 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 194 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 56 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 195 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.84 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 26 ? PHE A 29 ? ILE A 165 PHE A 168 A 2 ALA A 16 ? ASP A 21 ? ALA A 155 ASP A 160 A 3 GLU A 107 ? ASP A 116 ? GLU A 246 ASP A 255 A 4 THR A 92 ? SER A 104 ? THR A 231 SER A 243 A 5 ARG A 81 ? LYS A 86 ? ARG A 220 LYS A 225 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLN A 27 ? O GLN A 166 N VAL A 19 ? N VAL A 158 A 2 3 N ALA A 16 ? N ALA A 155 O VAL A 114 ? O VAL A 253 A 3 4 O ARG A 115 ? O ARG A 254 N HIS A 96 ? N HIS A 235 A 4 5 O PHE A 93 ? O PHE A 232 N GLY A 85 ? N GLY A 224 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A HEM 719 ? 21 'BINDING SITE FOR RESIDUE HEM A 719' AC2 Software A CMO 500 ? 4 'BINDING SITE FOR RESIDUE CMO A 500' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 21 HOH D . ? HOH A 14 . ? 1_555 ? 2 AC1 21 HOH D . ? HOH A 15 . ? 1_555 ? 3 AC1 21 ILE A 18 ? ILE A 157 . ? 1_555 ? 4 AC1 21 VAL A 49 ? VAL A 188 . ? 1_555 ? 5 AC1 21 LEU A 52 ? LEU A 191 . ? 1_555 ? 6 AC1 21 MET A 53 ? MET A 192 . ? 1_555 ? 7 AC1 21 ASP A 57 ? ASP A 196 . ? 1_555 ? 8 AC1 21 HIS A 61 ? HIS A 200 . ? 1_555 ? 9 AC1 21 TYR A 64 ? TYR A 203 . ? 1_555 ? 10 AC1 21 PRO A 74 ? PRO A 213 . ? 1_555 ? 11 AC1 21 HIS A 75 ? HIS A 214 . ? 1_555 ? 12 AC1 21 ILE A 76 ? ILE A 215 . ? 1_555 ? 13 AC1 21 ILE A 77 ? ILE A 216 . ? 1_555 ? 14 AC1 21 ARG A 81 ? ARG A 220 . ? 1_555 ? 15 AC1 21 VAL A 83 ? VAL A 222 . ? 1_555 ? 16 AC1 21 THR A 84 ? THR A 223 . ? 1_555 ? 17 AC1 21 LEU A 97 ? LEU A 236 . ? 1_555 ? 18 AC1 21 ILE A 99 ? ILE A 238 . ? 1_555 ? 19 AC1 21 PHE A 110 ? PHE A 249 . ? 1_555 ? 20 AC1 21 GLY A 112 ? GLY A 251 . ? 1_555 ? 21 AC1 21 CMO C . ? CMO A 500 . ? 1_555 ? 22 AC2 4 ILE A 76 ? ILE A 215 . ? 1_555 ? 23 AC2 4 LEU A 97 ? LEU A 236 . ? 1_555 ? 24 AC2 4 ILE A 99 ? ILE A 238 . ? 1_555 ? 25 AC2 4 HEM B . ? HEM A 719 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 184 ? ? -39.63 -28.20 2 1 ILE A 215 ? ? -134.76 -32.77 3 1 ILE A 218 ? ? -125.43 -50.85 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 140 ? A MET 1 2 1 Y 1 A ARG 141 ? A ARG 2 3 1 Y 1 A GLU 142 ? A GLU 3 4 1 Y 1 A THR 143 ? A THR 4 5 1 Y 1 A HIS 144 ? A HIS 5 6 1 Y 1 A LEU 145 ? A LEU 6 7 1 Y 1 A ARG 146 ? A ARG 7 8 1 Y 1 A SER 147 ? A SER 8 9 1 Y 1 A ILE 148 ? A ILE 9 10 1 Y 1 A LEU 149 ? A LEU 10 11 1 Y 1 A HIS 150 ? A HIS 11 12 1 Y 1 A THR 151 ? A THR 12 13 1 Y 1 A ILE 152 ? A ILE 13 14 1 Y 1 A PRO 153 ? A PRO 14 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CMO C C N N 74 CMO O O N N 75 GLN N N N N 76 GLN CA C N S 77 GLN C C N N 78 GLN O O N N 79 GLN CB C N N 80 GLN CG C N N 81 GLN CD C N N 82 GLN OE1 O N N 83 GLN NE2 N N N 84 GLN OXT O N N 85 GLN H H N N 86 GLN H2 H N N 87 GLN HA H N N 88 GLN HB2 H N N 89 GLN HB3 H N N 90 GLN HG2 H N N 91 GLN HG3 H N N 92 GLN HE21 H N N 93 GLN HE22 H N N 94 GLN HXT H N N 95 GLU N N N N 96 GLU CA C N S 97 GLU C C N N 98 GLU O O N N 99 GLU CB C N N 100 GLU CG C N N 101 GLU CD C N N 102 GLU OE1 O N N 103 GLU OE2 O N N 104 GLU OXT O N N 105 GLU H H N N 106 GLU H2 H N N 107 GLU HA H N N 108 GLU HB2 H N N 109 GLU HB3 H N N 110 GLU HG2 H N N 111 GLU HG3 H N N 112 GLU HE2 H N N 113 GLU HXT H N N 114 GLY N N N N 115 GLY CA C N N 116 GLY C C N N 117 GLY O O N N 118 GLY OXT O N N 119 GLY H H N N 120 GLY H2 H N N 121 GLY HA2 H N N 122 GLY HA3 H N N 123 GLY HXT H N N 124 HEM CHA C N N 125 HEM CHB C N N 126 HEM CHC C N N 127 HEM CHD C N N 128 HEM C1A C Y N 129 HEM C2A C Y N 130 HEM C3A C Y N 131 HEM C4A C Y N 132 HEM CMA C N N 133 HEM CAA C N N 134 HEM CBA C N N 135 HEM CGA C N N 136 HEM O1A O N N 137 HEM O2A O N N 138 HEM C1B C N N 139 HEM C2B C N N 140 HEM C3B C N N 141 HEM C4B C N N 142 HEM CMB C N N 143 HEM CAB C N N 144 HEM CBB C N N 145 HEM C1C C Y N 146 HEM C2C C Y N 147 HEM C3C C Y N 148 HEM C4C C Y N 149 HEM CMC C N N 150 HEM CAC C N N 151 HEM CBC C N N 152 HEM C1D C N N 153 HEM C2D C N N 154 HEM C3D C N N 155 HEM C4D C N N 156 HEM CMD C N N 157 HEM CAD C N N 158 HEM CBD C N N 159 HEM CGD C N N 160 HEM O1D O N N 161 HEM O2D O N N 162 HEM NA N Y N 163 HEM NB N N N 164 HEM NC N Y N 165 HEM ND N N N 166 HEM FE FE N N 167 HEM HHB H N N 168 HEM HHC H N N 169 HEM HHD H N N 170 HEM HMA H N N 171 HEM HMAA H N N 172 HEM HMAB H N N 173 HEM HAA H N N 174 HEM HAAA H N N 175 HEM HBA H N N 176 HEM HBAA H N N 177 HEM HMB H N N 178 HEM HMBA H N N 179 HEM HMBB H N N 180 HEM HAB H N N 181 HEM HBB H N N 182 HEM HBBA H N N 183 HEM HMC H N N 184 HEM HMCA H N N 185 HEM HMCB H N N 186 HEM HAC H N N 187 HEM HBC H N N 188 HEM HBCA H N N 189 HEM HMD H N N 190 HEM HMDA H N N 191 HEM HMDB H N N 192 HEM HAD H N N 193 HEM HADA H N N 194 HEM HBD H N N 195 HEM HBDA H N N 196 HEM H2A H N N 197 HEM H2D H N N 198 HEM HHA H N N 199 HIS N N N N 200 HIS CA C N S 201 HIS C C N N 202 HIS O O N N 203 HIS CB C N N 204 HIS CG C Y N 205 HIS ND1 N Y N 206 HIS CD2 C Y N 207 HIS CE1 C Y N 208 HIS NE2 N Y N 209 HIS OXT O N N 210 HIS H H N N 211 HIS H2 H N N 212 HIS HA H N N 213 HIS HB2 H N N 214 HIS HB3 H N N 215 HIS HD1 H N N 216 HIS HD2 H N N 217 HIS HE1 H N N 218 HIS HE2 H N N 219 HIS HXT H N N 220 HOH O O N N 221 HOH H1 H N N 222 HOH H2 H N N 223 ILE N N N N 224 ILE CA C N S 225 ILE C C N N 226 ILE O O N N 227 ILE CB C N S 228 ILE CG1 C N N 229 ILE CG2 C N N 230 ILE CD1 C N N 231 ILE OXT O N N 232 ILE H H N N 233 ILE H2 H N N 234 ILE HA H N N 235 ILE HB H N N 236 ILE HG12 H N N 237 ILE HG13 H N N 238 ILE HG21 H N N 239 ILE HG22 H N N 240 ILE HG23 H N N 241 ILE HD11 H N N 242 ILE HD12 H N N 243 ILE HD13 H N N 244 ILE HXT H N N 245 LEU N N N N 246 LEU CA C N S 247 LEU C C N N 248 LEU O O N N 249 LEU CB C N N 250 LEU CG C N N 251 LEU CD1 C N N 252 LEU CD2 C N N 253 LEU OXT O N N 254 LEU H H N N 255 LEU H2 H N N 256 LEU HA H N N 257 LEU HB2 H N N 258 LEU HB3 H N N 259 LEU HG H N N 260 LEU HD11 H N N 261 LEU HD12 H N N 262 LEU HD13 H N N 263 LEU HD21 H N N 264 LEU HD22 H N N 265 LEU HD23 H N N 266 LEU HXT H N N 267 LYS N N N N 268 LYS CA C N S 269 LYS C C N N 270 LYS O O N N 271 LYS CB C N N 272 LYS CG C N N 273 LYS CD C N N 274 LYS CE C N N 275 LYS NZ N N N 276 LYS OXT O N N 277 LYS H H N N 278 LYS H2 H N N 279 LYS HA H N N 280 LYS HB2 H N N 281 LYS HB3 H N N 282 LYS HG2 H N N 283 LYS HG3 H N N 284 LYS HD2 H N N 285 LYS HD3 H N N 286 LYS HE2 H N N 287 LYS HE3 H N N 288 LYS HZ1 H N N 289 LYS HZ2 H N N 290 LYS HZ3 H N N 291 LYS HXT H N N 292 MET N N N N 293 MET CA C N S 294 MET C C N N 295 MET O O N N 296 MET CB C N N 297 MET CG C N N 298 MET SD S N N 299 MET CE C N N 300 MET OXT O N N 301 MET H H N N 302 MET H2 H N N 303 MET HA H N N 304 MET HB2 H N N 305 MET HB3 H N N 306 MET HG2 H N N 307 MET HG3 H N N 308 MET HE1 H N N 309 MET HE2 H N N 310 MET HE3 H N N 311 MET HXT H N N 312 PHE N N N N 313 PHE CA C N S 314 PHE C C N N 315 PHE O O N N 316 PHE CB C N N 317 PHE CG C Y N 318 PHE CD1 C Y N 319 PHE CD2 C Y N 320 PHE CE1 C Y N 321 PHE CE2 C Y N 322 PHE CZ C Y N 323 PHE OXT O N N 324 PHE H H N N 325 PHE H2 H N N 326 PHE HA H N N 327 PHE HB2 H N N 328 PHE HB3 H N N 329 PHE HD1 H N N 330 PHE HD2 H N N 331 PHE HE1 H N N 332 PHE HE2 H N N 333 PHE HZ H N N 334 PHE HXT H N N 335 PRO N N N N 336 PRO CA C N S 337 PRO C C N N 338 PRO O O N N 339 PRO CB C N N 340 PRO CG C N N 341 PRO CD C N N 342 PRO OXT O N N 343 PRO H H N N 344 PRO HA H N N 345 PRO HB2 H N N 346 PRO HB3 H N N 347 PRO HG2 H N N 348 PRO HG3 H N N 349 PRO HD2 H N N 350 PRO HD3 H N N 351 PRO HXT H N N 352 SER N N N N 353 SER CA C N S 354 SER C C N N 355 SER O O N N 356 SER CB C N N 357 SER OG O N N 358 SER OXT O N N 359 SER H H N N 360 SER H2 H N N 361 SER HA H N N 362 SER HB2 H N N 363 SER HB3 H N N 364 SER HG H N N 365 SER HXT H N N 366 THR N N N N 367 THR CA C N S 368 THR C C N N 369 THR O O N N 370 THR CB C N R 371 THR OG1 O N N 372 THR CG2 C N N 373 THR OXT O N N 374 THR H H N N 375 THR H2 H N N 376 THR HA H N N 377 THR HB H N N 378 THR HG1 H N N 379 THR HG21 H N N 380 THR HG22 H N N 381 THR HG23 H N N 382 THR HXT H N N 383 TRP N N N N 384 TRP CA C N S 385 TRP C C N N 386 TRP O O N N 387 TRP CB C N N 388 TRP CG C Y N 389 TRP CD1 C Y N 390 TRP CD2 C Y N 391 TRP NE1 N Y N 392 TRP CE2 C Y N 393 TRP CE3 C Y N 394 TRP CZ2 C Y N 395 TRP CZ3 C Y N 396 TRP CH2 C Y N 397 TRP OXT O N N 398 TRP H H N N 399 TRP H2 H N N 400 TRP HA H N N 401 TRP HB2 H N N 402 TRP HB3 H N N 403 TRP HD1 H N N 404 TRP HE1 H N N 405 TRP HE3 H N N 406 TRP HZ2 H N N 407 TRP HZ3 H N N 408 TRP HH2 H N N 409 TRP HXT H N N 410 TYR N N N N 411 TYR CA C N S 412 TYR C C N N 413 TYR O O N N 414 TYR CB C N N 415 TYR CG C Y N 416 TYR CD1 C Y N 417 TYR CD2 C Y N 418 TYR CE1 C Y N 419 TYR CE2 C Y N 420 TYR CZ C Y N 421 TYR OH O N N 422 TYR OXT O N N 423 TYR H H N N 424 TYR H2 H N N 425 TYR HA H N N 426 TYR HB2 H N N 427 TYR HB3 H N N 428 TYR HD1 H N N 429 TYR HD2 H N N 430 TYR HE1 H N N 431 TYR HE2 H N N 432 TYR HH H N N 433 TYR HXT H N N 434 VAL N N N N 435 VAL CA C N S 436 VAL C C N N 437 VAL O O N N 438 VAL CB C N N 439 VAL CG1 C N N 440 VAL CG2 C N N 441 VAL OXT O N N 442 VAL H H N N 443 VAL H2 H N N 444 VAL HA H N N 445 VAL HB H N N 446 VAL HG11 H N N 447 VAL HG12 H N N 448 VAL HG13 H N N 449 VAL HG21 H N N 450 VAL HG22 H N N 451 VAL HG23 H N N 452 VAL HXT H N N 453 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CMO C O trip N N 70 GLN N CA sing N N 71 GLN N H sing N N 72 GLN N H2 sing N N 73 GLN CA C sing N N 74 GLN CA CB sing N N 75 GLN CA HA sing N N 76 GLN C O doub N N 77 GLN C OXT sing N N 78 GLN CB CG sing N N 79 GLN CB HB2 sing N N 80 GLN CB HB3 sing N N 81 GLN CG CD sing N N 82 GLN CG HG2 sing N N 83 GLN CG HG3 sing N N 84 GLN CD OE1 doub N N 85 GLN CD NE2 sing N N 86 GLN NE2 HE21 sing N N 87 GLN NE2 HE22 sing N N 88 GLN OXT HXT sing N N 89 GLU N CA sing N N 90 GLU N H sing N N 91 GLU N H2 sing N N 92 GLU CA C sing N N 93 GLU CA CB sing N N 94 GLU CA HA sing N N 95 GLU C O doub N N 96 GLU C OXT sing N N 97 GLU CB CG sing N N 98 GLU CB HB2 sing N N 99 GLU CB HB3 sing N N 100 GLU CG CD sing N N 101 GLU CG HG2 sing N N 102 GLU CG HG3 sing N N 103 GLU CD OE1 doub N N 104 GLU CD OE2 sing N N 105 GLU OE2 HE2 sing N N 106 GLU OXT HXT sing N N 107 GLY N CA sing N N 108 GLY N H sing N N 109 GLY N H2 sing N N 110 GLY CA C sing N N 111 GLY CA HA2 sing N N 112 GLY CA HA3 sing N N 113 GLY C O doub N N 114 GLY C OXT sing N N 115 GLY OXT HXT sing N N 116 HEM CHA C1A sing N N 117 HEM CHA C4D doub N N 118 HEM CHA HHA sing N N 119 HEM CHB C4A sing N N 120 HEM CHB C1B doub N N 121 HEM CHB HHB sing N N 122 HEM CHC C4B sing N N 123 HEM CHC C1C doub N N 124 HEM CHC HHC sing N N 125 HEM CHD C4C doub N N 126 HEM CHD C1D sing N N 127 HEM CHD HHD sing N N 128 HEM C1A C2A doub Y N 129 HEM C1A NA sing Y N 130 HEM C2A C3A sing Y N 131 HEM C2A CAA sing N N 132 HEM C3A C4A doub Y N 133 HEM C3A CMA sing N N 134 HEM C4A NA sing Y N 135 HEM CMA HMA sing N N 136 HEM CMA HMAA sing N N 137 HEM CMA HMAB sing N N 138 HEM CAA CBA sing N N 139 HEM CAA HAA sing N N 140 HEM CAA HAAA sing N N 141 HEM CBA CGA sing N N 142 HEM CBA HBA sing N N 143 HEM CBA HBAA sing N N 144 HEM CGA O1A doub N N 145 HEM CGA O2A sing N N 146 HEM C1B C2B sing N N 147 HEM C1B NB sing N N 148 HEM C2B C3B doub N N 149 HEM C2B CMB sing N N 150 HEM C3B C4B sing N N 151 HEM C3B CAB sing N N 152 HEM C4B NB doub N N 153 HEM CMB HMB sing N N 154 HEM CMB HMBA sing N N 155 HEM CMB HMBB sing N N 156 HEM CAB CBB doub N N 157 HEM CAB HAB sing N N 158 HEM CBB HBB sing N N 159 HEM CBB HBBA sing N N 160 HEM C1C C2C sing Y N 161 HEM C1C NC sing Y N 162 HEM C2C C3C doub Y N 163 HEM C2C CMC sing N N 164 HEM C3C C4C sing Y N 165 HEM C3C CAC sing N N 166 HEM C4C NC sing Y N 167 HEM CMC HMC sing N N 168 HEM CMC HMCA sing N N 169 HEM CMC HMCB sing N N 170 HEM CAC CBC doub N N 171 HEM CAC HAC sing N N 172 HEM CBC HBC sing N N 173 HEM CBC HBCA sing N N 174 HEM C1D C2D sing N N 175 HEM C1D ND doub N N 176 HEM C2D C3D doub N N 177 HEM C2D CMD sing N N 178 HEM C3D C4D sing N N 179 HEM C3D CAD sing N N 180 HEM C4D ND sing N N 181 HEM CMD HMD sing N N 182 HEM CMD HMDA sing N N 183 HEM CMD HMDB sing N N 184 HEM CAD CBD sing N N 185 HEM CAD HAD sing N N 186 HEM CAD HADA sing N N 187 HEM CBD CGD sing N N 188 HEM CBD HBD sing N N 189 HEM CBD HBDA sing N N 190 HEM CGD O1D doub N N 191 HEM CGD O2D sing N N 192 HEM O2A H2A sing N N 193 HEM O2D H2D sing N N 194 HEM FE NA sing N N 195 HEM FE NB sing N N 196 HEM FE NC sing N N 197 HEM FE ND sing N N 198 HIS N CA sing N N 199 HIS N H sing N N 200 HIS N H2 sing N N 201 HIS CA C sing N N 202 HIS CA CB sing N N 203 HIS CA HA sing N N 204 HIS C O doub N N 205 HIS C OXT sing N N 206 HIS CB CG sing N N 207 HIS CB HB2 sing N N 208 HIS CB HB3 sing N N 209 HIS CG ND1 sing Y N 210 HIS CG CD2 doub Y N 211 HIS ND1 CE1 doub Y N 212 HIS ND1 HD1 sing N N 213 HIS CD2 NE2 sing Y N 214 HIS CD2 HD2 sing N N 215 HIS CE1 NE2 sing Y N 216 HIS CE1 HE1 sing N N 217 HIS NE2 HE2 sing N N 218 HIS OXT HXT sing N N 219 HOH O H1 sing N N 220 HOH O H2 sing N N 221 ILE N CA sing N N 222 ILE N H sing N N 223 ILE N H2 sing N N 224 ILE CA C sing N N 225 ILE CA CB sing N N 226 ILE CA HA sing N N 227 ILE C O doub N N 228 ILE C OXT sing N N 229 ILE CB CG1 sing N N 230 ILE CB CG2 sing N N 231 ILE CB HB sing N N 232 ILE CG1 CD1 sing N N 233 ILE CG1 HG12 sing N N 234 ILE CG1 HG13 sing N N 235 ILE CG2 HG21 sing N N 236 ILE CG2 HG22 sing N N 237 ILE CG2 HG23 sing N N 238 ILE CD1 HD11 sing N N 239 ILE CD1 HD12 sing N N 240 ILE CD1 HD13 sing N N 241 ILE OXT HXT sing N N 242 LEU N CA sing N N 243 LEU N H sing N N 244 LEU N H2 sing N N 245 LEU CA C sing N N 246 LEU CA CB sing N N 247 LEU CA HA sing N N 248 LEU C O doub N N 249 LEU C OXT sing N N 250 LEU CB CG sing N N 251 LEU CB HB2 sing N N 252 LEU CB HB3 sing N N 253 LEU CG CD1 sing N N 254 LEU CG CD2 sing N N 255 LEU CG HG sing N N 256 LEU CD1 HD11 sing N N 257 LEU CD1 HD12 sing N N 258 LEU CD1 HD13 sing N N 259 LEU CD2 HD21 sing N N 260 LEU CD2 HD22 sing N N 261 LEU CD2 HD23 sing N N 262 LEU OXT HXT sing N N 263 LYS N CA sing N N 264 LYS N H sing N N 265 LYS N H2 sing N N 266 LYS CA C sing N N 267 LYS CA CB sing N N 268 LYS CA HA sing N N 269 LYS C O doub N N 270 LYS C OXT sing N N 271 LYS CB CG sing N N 272 LYS CB HB2 sing N N 273 LYS CB HB3 sing N N 274 LYS CG CD sing N N 275 LYS CG HG2 sing N N 276 LYS CG HG3 sing N N 277 LYS CD CE sing N N 278 LYS CD HD2 sing N N 279 LYS CD HD3 sing N N 280 LYS CE NZ sing N N 281 LYS CE HE2 sing N N 282 LYS CE HE3 sing N N 283 LYS NZ HZ1 sing N N 284 LYS NZ HZ2 sing N N 285 LYS NZ HZ3 sing N N 286 LYS OXT HXT sing N N 287 MET N CA sing N N 288 MET N H sing N N 289 MET N H2 sing N N 290 MET CA C sing N N 291 MET CA CB sing N N 292 MET CA HA sing N N 293 MET C O doub N N 294 MET C OXT sing N N 295 MET CB CG sing N N 296 MET CB HB2 sing N N 297 MET CB HB3 sing N N 298 MET CG SD sing N N 299 MET CG HG2 sing N N 300 MET CG HG3 sing N N 301 MET SD CE sing N N 302 MET CE HE1 sing N N 303 MET CE HE2 sing N N 304 MET CE HE3 sing N N 305 MET OXT HXT sing N N 306 PHE N CA sing N N 307 PHE N H sing N N 308 PHE N H2 sing N N 309 PHE CA C sing N N 310 PHE CA CB sing N N 311 PHE CA HA sing N N 312 PHE C O doub N N 313 PHE C OXT sing N N 314 PHE CB CG sing N N 315 PHE CB HB2 sing N N 316 PHE CB HB3 sing N N 317 PHE CG CD1 doub Y N 318 PHE CG CD2 sing Y N 319 PHE CD1 CE1 sing Y N 320 PHE CD1 HD1 sing N N 321 PHE CD2 CE2 doub Y N 322 PHE CD2 HD2 sing N N 323 PHE CE1 CZ doub Y N 324 PHE CE1 HE1 sing N N 325 PHE CE2 CZ sing Y N 326 PHE CE2 HE2 sing N N 327 PHE CZ HZ sing N N 328 PHE OXT HXT sing N N 329 PRO N CA sing N N 330 PRO N CD sing N N 331 PRO N H sing N N 332 PRO CA C sing N N 333 PRO CA CB sing N N 334 PRO CA HA sing N N 335 PRO C O doub N N 336 PRO C OXT sing N N 337 PRO CB CG sing N N 338 PRO CB HB2 sing N N 339 PRO CB HB3 sing N N 340 PRO CG CD sing N N 341 PRO CG HG2 sing N N 342 PRO CG HG3 sing N N 343 PRO CD HD2 sing N N 344 PRO CD HD3 sing N N 345 PRO OXT HXT sing N N 346 SER N CA sing N N 347 SER N H sing N N 348 SER N H2 sing N N 349 SER CA C sing N N 350 SER CA CB sing N N 351 SER CA HA sing N N 352 SER C O doub N N 353 SER C OXT sing N N 354 SER CB OG sing N N 355 SER CB HB2 sing N N 356 SER CB HB3 sing N N 357 SER OG HG sing N N 358 SER OXT HXT sing N N 359 THR N CA sing N N 360 THR N H sing N N 361 THR N H2 sing N N 362 THR CA C sing N N 363 THR CA CB sing N N 364 THR CA HA sing N N 365 THR C O doub N N 366 THR C OXT sing N N 367 THR CB OG1 sing N N 368 THR CB CG2 sing N N 369 THR CB HB sing N N 370 THR OG1 HG1 sing N N 371 THR CG2 HG21 sing N N 372 THR CG2 HG22 sing N N 373 THR CG2 HG23 sing N N 374 THR OXT HXT sing N N 375 TRP N CA sing N N 376 TRP N H sing N N 377 TRP N H2 sing N N 378 TRP CA C sing N N 379 TRP CA CB sing N N 380 TRP CA HA sing N N 381 TRP C O doub N N 382 TRP C OXT sing N N 383 TRP CB CG sing N N 384 TRP CB HB2 sing N N 385 TRP CB HB3 sing N N 386 TRP CG CD1 doub Y N 387 TRP CG CD2 sing Y N 388 TRP CD1 NE1 sing Y N 389 TRP CD1 HD1 sing N N 390 TRP CD2 CE2 doub Y N 391 TRP CD2 CE3 sing Y N 392 TRP NE1 CE2 sing Y N 393 TRP NE1 HE1 sing N N 394 TRP CE2 CZ2 sing Y N 395 TRP CE3 CZ3 doub Y N 396 TRP CE3 HE3 sing N N 397 TRP CZ2 CH2 doub Y N 398 TRP CZ2 HZ2 sing N N 399 TRP CZ3 CH2 sing Y N 400 TRP CZ3 HZ3 sing N N 401 TRP CH2 HH2 sing N N 402 TRP OXT HXT sing N N 403 TYR N CA sing N N 404 TYR N H sing N N 405 TYR N H2 sing N N 406 TYR CA C sing N N 407 TYR CA CB sing N N 408 TYR CA HA sing N N 409 TYR C O doub N N 410 TYR C OXT sing N N 411 TYR CB CG sing N N 412 TYR CB HB2 sing N N 413 TYR CB HB3 sing N N 414 TYR CG CD1 doub Y N 415 TYR CG CD2 sing Y N 416 TYR CD1 CE1 sing Y N 417 TYR CD1 HD1 sing N N 418 TYR CD2 CE2 doub Y N 419 TYR CD2 HD2 sing N N 420 TYR CE1 CZ doub Y N 421 TYR CE1 HE1 sing N N 422 TYR CE2 CZ sing Y N 423 TYR CE2 HE2 sing N N 424 TYR CZ OH sing N N 425 TYR OH HH sing N N 426 TYR OXT HXT sing N N 427 VAL N CA sing N N 428 VAL N H sing N N 429 VAL N H2 sing N N 430 VAL CA C sing N N 431 VAL CA CB sing N N 432 VAL CA HA sing N N 433 VAL C O doub N N 434 VAL C OXT sing N N 435 VAL CB CG1 sing N N 436 VAL CB CG2 sing N N 437 VAL CB HB sing N N 438 VAL CG1 HG11 sing N N 439 VAL CG1 HG12 sing N N 440 VAL CG1 HG13 sing N N 441 VAL CG2 HG21 sing N N 442 VAL CG2 HG22 sing N N 443 VAL CG2 HG23 sing N N 444 VAL OXT HXT sing N N 445 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1DRM _pdbx_initial_refinement_model.details 'PDB ENTRY 1DRM' # _atom_sites.entry_id 1LSV _atom_sites.fract_transf_matrix[1][1] 0.007873 _atom_sites.fract_transf_matrix[1][2] 0.004546 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009091 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017200 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O S # loop_