data_1LU5
# 
_entry.id   1LU5 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.386 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   1LU5         pdb_00001lu5 10.2210/pdb1lu5/pdb 
NDB   DD0050       ?            ?                   
RCSB  RCSB016271   ?            ?                   
WWPDB D_1000016271 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2002-12-20 
2 'Structure model' 1 1 2008-04-28 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2012-02-08 
5 'Structure model' 1 4 2024-02-14 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Derived calculations'      
4 5 'Structure model' 'Data collection'           
5 5 'Structure model' 'Database references'       
6 5 'Structure model' 'Derived calculations'      
7 5 'Structure model' 'Refinement description'    
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 5 'Structure model' chem_comp_atom                
2 5 'Structure model' chem_comp_bond                
3 5 'Structure model' database_2                    
4 5 'Structure model' pdbx_initial_refinement_model 
5 5 'Structure model' struct_site                   
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1 5 'Structure model' '_database_2.pdbx_DOI'                
2 5 'Structure model' '_database_2.pdbx_database_accession' 
3 5 'Structure model' '_struct_site.pdbx_auth_asym_id'      
4 5 'Structure model' '_struct_site.pdbx_auth_comp_id'      
5 5 'Structure model' '_struct_site.pdbx_auth_seq_id'       
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        1LU5 
_pdbx_database_status.recvd_initial_deposition_date   2002-05-21 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.SG_entry                        . 
_pdbx_database_status.status_code_sf                  ? 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_nmr_data            ? 
_pdbx_database_status.methods_development_category    ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Silverman, A.P.' 1 
'Bu, W.'          2 
'Cohen, S.M.'     3 
'Lippard, S.J.'   4 
# 
_citation.id                        primary 
_citation.title                     
;2.4-A Crystal Structure of the Asymmetric Platinum Complex {Pt(ammine)(cyclohexylamine)}2+ Bound to 
                    a Dodecamer DNA Duplex
;
_citation.journal_abbrev            J.Biol.Chem. 
_citation.journal_volume            277 
_citation.page_first                49743 
_citation.page_last                 49749 
_citation.year                      2002 
_citation.journal_id_ASTM           JBCHA3 
_citation.country                   US 
_citation.journal_id_ISSN           0021-9258 
_citation.journal_id_CSD            0071 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   12377787 
_citation.pdbx_database_id_DOI      10.1074/jbc.M206979200 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Silverman, A.P.' 1 ? 
primary 'Bu, W.'          2 ? 
primary 'Cohen, S.M.'     3 ? 
primary 'Lippard, S.J.'   4 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     syn "5'-D(*CP*CP*TP*CP*TP*GP*GP*TP*CP*TP*CP*C)-3'"      3565.316 2  ? ? ? ? 
2 polymer     syn "5'-D(*GP*GP*AP*GP*AP*CP*CP*AP*GP*AP*GP*G)-3'"      3761.468 2  ? ? ? ? 
3 non-polymer syn 'CIS-(AMMINE)(CYCLOHEXYLAMINE)PLATINUM(II) COMPLEX' 311.283  2  ? ? ? ? 
4 water       nat water                                               18.015   47 ? ? ? ? 
# 
loop_
_entity_poly.entity_id 
_entity_poly.type 
_entity_poly.nstd_linkage 
_entity_poly.nstd_monomer 
_entity_poly.pdbx_seq_one_letter_code 
_entity_poly.pdbx_seq_one_letter_code_can 
_entity_poly.pdbx_strand_id 
_entity_poly.pdbx_target_identifier 
1 polydeoxyribonucleotide no no '(DC)(DC)(DT)(DC)(DT)(DG)(DG)(DT)(DC)(DT)(DC)(DC)' CCTCTGGTCTCC A,C ? 
2 polydeoxyribonucleotide no no '(DG)(DG)(DA)(DG)(DA)(DC)(DC)(DA)(DG)(DA)(DG)(DG)' GGAGACCAGAGG B,D ? 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
3 'CIS-(AMMINE)(CYCLOHEXYLAMINE)PLATINUM(II) COMPLEX' LPT 
4 water                                               HOH 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DC n 
1 2  DC n 
1 3  DT n 
1 4  DC n 
1 5  DT n 
1 6  DG n 
1 7  DG n 
1 8  DT n 
1 9  DC n 
1 10 DT n 
1 11 DC n 
1 12 DC n 
2 1  DG n 
2 2  DG n 
2 3  DA n 
2 4  DG n 
2 5  DA n 
2 6  DC n 
2 7  DC n 
2 8  DA n 
2 9  DG n 
2 10 DA n 
2 11 DG n 
2 12 DG n 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
DA  'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE"                ? 'C10 H14 N5 O6 P' 331.222 
DC  'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE"                 ? 'C9 H14 N3 O7 P'  307.197 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE"                ? 'C10 H14 N5 O7 P' 347.221 
DT  'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE"                        ? 'C10 H15 N2 O8 P' 322.208 
HOH non-polymer   . WATER                                               ? 'H2 O'            18.015  
LPT non-polymer   . 'CIS-(AMMINE)(CYCLOHEXYLAMINE)PLATINUM(II) COMPLEX' ? 'C6 H16 N2 Pt 2'  311.283 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DC 1  1  1  DC C A . n 
A 1 2  DC 2  2  2  DC C A . n 
A 1 3  DT 3  3  3  DT T A . n 
A 1 4  DC 4  4  4  DC C A . n 
A 1 5  DT 5  5  5  DT T A . n 
A 1 6  DG 6  6  6  DG G A . n 
A 1 7  DG 7  7  7  DG G A . n 
A 1 8  DT 8  8  8  DT T A . n 
A 1 9  DC 9  9  9  DC C A . n 
A 1 10 DT 10 10 10 DT T A . n 
A 1 11 DC 11 11 11 DC C A . n 
A 1 12 DC 12 12 12 DC C A . n 
B 2 1  DG 1  13 13 DG G B . n 
B 2 2  DG 2  14 14 DG G B . n 
B 2 3  DA 3  15 15 DA A B . n 
B 2 4  DG 4  16 16 DG G B . n 
B 2 5  DA 5  17 17 DA A B . n 
B 2 6  DC 6  18 18 DC C B . n 
B 2 7  DC 7  19 19 DC C B . n 
B 2 8  DA 8  20 20 DA A B . n 
B 2 9  DG 9  21 21 DG G B . n 
B 2 10 DA 10 22 22 DA A B . n 
B 2 11 DG 11 23 23 DG G B . n 
B 2 12 DG 12 24 24 DG G B . n 
C 1 1  DC 1  25 25 DC C C . n 
C 1 2  DC 2  26 26 DC C C . n 
C 1 3  DT 3  27 27 DT T C . n 
C 1 4  DC 4  28 28 DC C C . n 
C 1 5  DT 5  29 29 DT T C . n 
C 1 6  DG 6  30 30 DG G C . n 
C 1 7  DG 7  31 31 DG G C . n 
C 1 8  DT 8  32 32 DT T C . n 
C 1 9  DC 9  33 33 DC C C . n 
C 1 10 DT 10 34 34 DT T C . n 
C 1 11 DC 11 35 35 DC C C . n 
C 1 12 DC 12 36 36 DC C C . n 
D 2 1  DG 1  37 37 DG G D . n 
D 2 2  DG 2  38 38 DG G D . n 
D 2 3  DA 3  39 39 DA A D . n 
D 2 4  DG 4  40 40 DG G D . n 
D 2 5  DA 5  41 41 DA A D . n 
D 2 6  DC 6  42 42 DC C D . n 
D 2 7  DC 7  43 43 DC C D . n 
D 2 8  DA 8  44 44 DA A D . n 
D 2 9  DG 9  45 45 DG G D . n 
D 2 10 DA 10 46 46 DA A D . n 
D 2 11 DG 11 47 47 DG G D . n 
D 2 12 DG 12 48 48 DG G D . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
E 3 LPT 1  49  49  LPT UNK A . 
F 3 LPT 1  50  50  LPT UNK C . 
G 4 HOH 1  204 204 HOH HOH A . 
G 4 HOH 2  214 214 HOH HOH A . 
G 4 HOH 3  216 216 HOH HOH A . 
G 4 HOH 4  222 222 HOH HOH A . 
G 4 HOH 5  224 224 HOH HOH A . 
G 4 HOH 6  230 230 HOH HOH A . 
G 4 HOH 7  231 231 HOH HOH A . 
G 4 HOH 8  232 232 HOH HOH A . 
G 4 HOH 9  233 233 HOH HOH A . 
G 4 HOH 10 241 241 HOH HOH A . 
G 4 HOH 11 246 246 HOH HOH A . 
H 4 HOH 1  207 207 HOH HOH B . 
H 4 HOH 2  211 211 HOH HOH B . 
H 4 HOH 3  213 213 HOH HOH B . 
H 4 HOH 4  218 218 HOH HOH B . 
H 4 HOH 5  220 220 HOH HOH B . 
H 4 HOH 6  225 225 HOH HOH B . 
H 4 HOH 7  228 228 HOH HOH B . 
H 4 HOH 8  239 239 HOH HOH B . 
H 4 HOH 9  240 240 HOH HOH B . 
H 4 HOH 10 244 244 HOH HOH B . 
H 4 HOH 11 245 245 HOH HOH B . 
I 4 HOH 1  201 201 HOH HOH C . 
I 4 HOH 2  202 202 HOH HOH C . 
I 4 HOH 3  206 206 HOH HOH C . 
I 4 HOH 4  210 210 HOH HOH C . 
I 4 HOH 5  212 212 HOH HOH C . 
I 4 HOH 6  219 219 HOH HOH C . 
I 4 HOH 7  223 223 HOH HOH C . 
I 4 HOH 8  226 226 HOH HOH C . 
I 4 HOH 9  234 234 HOH HOH C . 
I 4 HOH 10 236 236 HOH HOH C . 
I 4 HOH 11 237 237 HOH HOH C . 
J 4 HOH 1  203 203 HOH HOH D . 
J 4 HOH 2  205 205 HOH HOH D . 
J 4 HOH 3  208 208 HOH HOH D . 
J 4 HOH 4  209 209 HOH HOH D . 
J 4 HOH 5  215 215 HOH HOH D . 
J 4 HOH 6  217 217 HOH HOH D . 
J 4 HOH 7  221 221 HOH HOH D . 
J 4 HOH 8  227 227 HOH HOH D . 
J 4 HOH 9  229 229 HOH HOH D . 
J 4 HOH 10 235 235 HOH HOH D . 
J 4 HOH 11 238 238 HOH HOH D . 
J 4 HOH 12 242 242 HOH HOH D . 
J 4 HOH 13 243 243 HOH HOH D . 
J 4 HOH 14 248 248 HOH HOH D . 
# 
loop_
_software.name 
_software.classification 
_software.version 
_software.citation_id 
_software.pdbx_ordinal 
DENZO     'data reduction' . ? 1 
SCALEPACK 'data scaling'   . ? 2 
SHELXS    phasing          . ? 3 
SHELXL-97 refinement       . ? 4 
# 
_cell.entry_id           1LU5 
_cell.length_a           31.644 
_cell.length_b           35.638 
_cell.length_c           46.556 
_cell.angle_alpha        79.53 
_cell.angle_beta         83.02 
_cell.angle_gamma        81.36 
_cell.Z_PDB              2 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.entry_id                         1LU5 
_symmetry.space_group_name_H-M             'P 1' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                1 
# 
_exptl.entry_id          1LU5 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   1 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_percent_sol   67.4 
_exptl_crystal.density_Matthews      3.78 
_exptl_crystal.description           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, HANGING DROP' 
_exptl_crystal_grow.temp            277 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              6.5 
_exptl_crystal_grow.pdbx_details    
'spermine, sodium cacodylate, magnesium acetate, PEG 4000, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K' 
_exptl_crystal_grow.pdbx_pH_range   . 
# 
loop_
_exptl_crystal_grow_comp.crystal_id 
_exptl_crystal_grow_comp.id 
_exptl_crystal_grow_comp.sol_id 
_exptl_crystal_grow_comp.name 
_exptl_crystal_grow_comp.conc 
_exptl_crystal_grow_comp.volume 
_exptl_crystal_grow_comp.details 
1 1 1 spermine            ? ? ? 
1 2 1 'sodium cacodylate' ? ? ? 
1 3 1 'magnesium acetate' ? ? ? 
1 4 1 'PEG 4000'          ? ? ? 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           100 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               CCD 
_diffrn_detector.type                   MARRESEARCH 
_diffrn_detector.pdbx_collection_date   2001-08-12 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.pdbx_diffrn_protocol             'SINGLE WAVELENGTH' 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   0.97 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      SYNCHROTRON 
_diffrn_source.type                        'APS BEAMLINE 19-ID' 
_diffrn_source.pdbx_synchrotron_site       APS 
_diffrn_source.pdbx_synchrotron_beamline   19-ID 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_wavelength_list        0.97 
# 
_reflns.entry_id                     1LU5 
_reflns.observed_criterion_sigma_F   4 
_reflns.observed_criterion_sigma_I   2 
_reflns.d_resolution_high            2.4 
_reflns.d_resolution_low             50 
_reflns.number_all                   ? 
_reflns.number_obs                   7337 
_reflns.percent_possible_obs         96.3 
_reflns.pdbx_Rmerge_I_obs            0.082 
_reflns.pdbx_Rsym_value              0.09 
_reflns.pdbx_netI_over_sigmaI        9.2 
_reflns.B_iso_Wilson_estimate        ? 
_reflns.pdbx_redundancy              ? 
_reflns.R_free_details               ? 
_reflns.pdbx_ordinal                 1 
_reflns.pdbx_diffrn_id               1 
# 
_reflns_shell.d_res_high             2.40 
_reflns_shell.d_res_low              2.49 
_reflns_shell.percent_possible_all   96.3 
_reflns_shell.Rmerge_I_obs           0.251 
_reflns_shell.pdbx_Rsym_value        0.277 
_reflns_shell.meanI_over_sigI_obs    ? 
_reflns_shell.pdbx_redundancy        ? 
_reflns_shell.percent_possible_obs   ? 
_reflns_shell.number_unique_all      ? 
_reflns_shell.pdbx_ordinal           1 
_reflns_shell.pdbx_diffrn_id         1 
# 
_refine.entry_id                                 1LU5 
_refine.ls_d_res_high                            2.40 
_refine.ls_d_res_low                             50.0 
_refine.pdbx_ls_sigma_F                          4 
_refine.pdbx_ls_sigma_I                          2 
_refine.ls_number_reflns_all                     6604 
_refine.ls_number_reflns_obs                     ? 
_refine.ls_number_reflns_R_free                  ? 
_refine.ls_percent_reflns_obs                    96.3 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_obs                          ? 
_refine.ls_R_factor_R_work                       ? 
_refine.ls_R_factor_R_free                       ? 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.ls_number_parameters                     4163 
_refine.ls_number_restraints                     4897 
_refine.ls_percent_reflns_R_free                 10.0 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.pdbx_method_to_determine_struct          'MOLECULAR REPLACEMENT' 
_refine.pdbx_starting_model                      'PDB Entry 1AIO' 
_refine.pdbx_ls_cross_valid_method               THROUGHOUT 
_refine.pdbx_R_Free_selection_details            random 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_stereochemistry_target_values       ? 
_refine.solvent_model_details                    ? 
_refine.solvent_model_param_bsol                 ? 
_refine.solvent_model_param_ksol                 ? 
_refine.occupancy_max                            ? 
_refine.occupancy_min                            ? 
_refine.pdbx_isotropic_thermal_model             isotropic 
_refine.B_iso_mean                               ? 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.details                                  ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.overall_SU_R_free                        ? 
_refine.overall_SU_B                             ? 
_refine.overall_SU_ML                            ? 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_analyze.entry_id                        1LU5 
_refine_analyze.Luzzati_coordinate_error_obs    ? 
_refine_analyze.Luzzati_d_res_low_obs           ? 
_refine_analyze.Luzzati_coordinate_error_free   ? 
_refine_analyze.Luzzati_d_res_low_free          ? 
_refine_analyze.Luzzati_sigma_a_obs             ? 
_refine_analyze.Luzzati_sigma_a_free            ? 
_refine_analyze.number_disordered_residues      ? 
_refine_analyze.occupancy_sum_non_hydrogen      1037.00 
_refine_analyze.occupancy_sum_hydrogen          0.00 
_refine_analyze.pdbx_refine_id                  'X-RAY DIFFRACTION' 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   972 
_refine_hist.pdbx_number_atoms_ligand         18 
_refine_hist.number_atoms_solvent             47 
_refine_hist.number_atoms_total               1037 
_refine_hist.d_res_high                       2.40 
_refine_hist.d_res_low                        50.0 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
s_bond_d               0.005  ? ? ? 'X-RAY DIFFRACTION' ? 
s_angle_d              0.022  ? ? ? 'X-RAY DIFFRACTION' ? 
s_similar_dist         0.00   ? ? ? 'X-RAY DIFFRACTION' ? 
s_from_restr_planes    0.0003 ? ? ? 'X-RAY DIFFRACTION' ? 
s_zero_chiral_vol      0.000  ? ? ? 'X-RAY DIFFRACTION' ? 
s_non_zero_chiral_vol  0.004  ? ? ? 'X-RAY DIFFRACTION' ? 
s_anti_bump_dis_restr  0.005  ? ? ? 'X-RAY DIFFRACTION' ? 
s_rigid_bond_adp_cmpnt 0.000  ? ? ? 'X-RAY DIFFRACTION' ? 
s_similar_adp_cmpnt    0.075  ? ? ? 'X-RAY DIFFRACTION' ? 
s_approx_iso_adps      0.000  ? ? ? 'X-RAY DIFFRACTION' ? 
# 
_pdbx_refine.R_factor_all_4sig_cutoff                    0.2351 
_pdbx_refine.R_factor_obs_4sig_cutoff                    0.2008 
_pdbx_refine.number_reflns_obs_4sig_cutoff               5267 
_pdbx_refine.free_R_factor_4sig_cutoff                   0.2495 
_pdbx_refine.free_R_val_test_set_ct_4sig_cutoff          565 
_pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff   10 
_pdbx_refine.entry_id                                    1LU5 
_pdbx_refine.R_factor_all_no_cutoff                      ? 
_pdbx_refine.R_factor_obs_no_cutoff                      0.2345 
_pdbx_refine.number_reflns_obs_no_cutoff                 6604 
_pdbx_refine.free_R_factor_no_cutoff                     0.2944 
_pdbx_refine.free_R_val_test_set_ct_no_cutoff            733 
_pdbx_refine.free_R_val_test_set_size_perc_no_cutoff     10.00 
_pdbx_refine.pdbx_refine_id                              'X-RAY DIFFRACTION' 
_pdbx_refine.free_R_error_no_cutoff                      ? 
# 
_database_PDB_matrix.entry_id          1LU5 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.000000 
_database_PDB_matrix.origx_vector[2]   0.000000 
_database_PDB_matrix.origx_vector[3]   0.000000 
# 
_struct.entry_id                  1LU5 
_struct.title                     
'2.4 Angstrom Crystal Structure of the Asymmetric Platinum Complex {Pt(ammine)(cyclohexylamine)}2+ Bound to a Dodecamer DNA Duplex' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        1LU5 
_struct_keywords.pdbx_keywords   DNA 
_struct_keywords.text            'platinum-DNA complex, DNA' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 2 ? 
C N N 1 ? 
D N N 2 ? 
E N N 3 ? 
F N N 3 ? 
G N N 4 ? 
H N N 4 ? 
I N N 4 ? 
J N N 4 ? 
# 
loop_
_struct_ref.id 
_struct_ref.entity_id 
_struct_ref.db_name 
_struct_ref.db_code 
_struct_ref.pdbx_db_accession 
_struct_ref.pdbx_db_isoform 
_struct_ref.pdbx_seq_one_letter_code 
_struct_ref.pdbx_align_begin 
1 1 PDB 1LU5 1LU5 ? ? ? 
2 2 PDB 1LU5 1LU5 ? ? ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 1LU5 A 1 ? 12 ? 1LU5 1  ? 12 ? 1  12 
2 2 1LU5 B 1 ? 12 ? 1LU5 13 ? 24 ? 13 24 
3 1 1LU5 C 1 ? 12 ? 1LU5 25 ? 36 ? 25 36 
4 2 1LU5 D 1 ? 12 ? 1LU5 37 ? 48 ? 37 48 
# 
loop_
_pdbx_struct_assembly.id 
_pdbx_struct_assembly.details 
_pdbx_struct_assembly.method_details 
_pdbx_struct_assembly.oligomeric_details 
_pdbx_struct_assembly.oligomeric_count 
1 author_defined_assembly ? dimeric 2 
2 author_defined_assembly ? dimeric 2 
# 
loop_
_pdbx_struct_assembly_gen.assembly_id 
_pdbx_struct_assembly_gen.oper_expression 
_pdbx_struct_assembly_gen.asym_id_list 
1 1 A,B,E,G,H 
2 1 C,D,F,I,J 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
_struct_biol.id   1 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
metalc1  metalc ? ? A DG 6  N7 ? ? ? 1_555 E LPT .  PT ? ? A DG 6  A LPT 49 1_555 ? ? ? ? ? ? ?            1.965 ? ? 
metalc2  metalc ? ? A DG 7  N7 ? ? ? 1_555 E LPT .  PT ? ? A DG 7  A LPT 49 1_555 ? ? ? ? ? ? ?            1.957 ? ? 
metalc3  metalc ? ? C DG 6  N7 ? ? ? 1_555 F LPT .  PT ? ? C DG 30 C LPT 50 1_555 ? ? ? ? ? ? ?            1.961 ? ? 
metalc4  metalc ? ? C DG 7  N7 ? ? ? 1_555 F LPT .  PT ? ? C DG 31 C LPT 50 1_555 ? ? ? ? ? ? ?            1.961 ? ? 
hydrog1  hydrog ? ? A DC 1  N3 ? ? ? 1_555 B DG  12 N1 ? ? A DC 1  B DG  24 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog2  hydrog ? ? A DC 1  N4 ? ? ? 1_555 B DG  12 O6 ? ? A DC 1  B DG  24 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog3  hydrog ? ? A DC 1  O2 ? ? ? 1_555 B DG  12 N2 ? ? A DC 1  B DG  24 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog4  hydrog ? ? A DC 2  N3 ? ? ? 1_555 B DG  11 N1 ? ? A DC 2  B DG  23 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog5  hydrog ? ? A DC 2  N4 ? ? ? 1_555 B DG  11 O6 ? ? A DC 2  B DG  23 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog6  hydrog ? ? A DC 2  O2 ? ? ? 1_555 B DG  11 N2 ? ? A DC 2  B DG  23 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog7  hydrog ? ? A DT 3  N3 ? ? ? 1_555 B DA  10 N1 ? ? A DT 3  B DA  22 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ?     ? ? 
hydrog8  hydrog ? ? A DC 4  N3 ? ? ? 1_555 B DG  9  N1 ? ? A DC 4  B DG  21 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog9  hydrog ? ? A DC 4  N4 ? ? ? 1_555 B DG  9  O6 ? ? A DC 4  B DG  21 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog10 hydrog ? ? A DC 4  O2 ? ? ? 1_555 B DG  9  N2 ? ? A DC 4  B DG  21 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog11 hydrog ? ? A DT 5  N3 ? ? ? 1_555 B DA  8  N1 ? ? A DT 5  B DA  20 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog12 hydrog ? ? A DT 5  O4 ? ? ? 1_555 B DA  8  N6 ? ? A DT 5  B DA  20 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog13 hydrog ? ? A DG 6  N1 ? ? ? 1_555 B DC  7  N3 ? ? A DG 6  B DC  19 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog14 hydrog ? ? A DG 6  N2 ? ? ? 1_555 B DC  7  O2 ? ? A DG 6  B DC  19 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog15 hydrog ? ? A DG 6  O6 ? ? ? 1_555 B DC  7  N4 ? ? A DG 6  B DC  19 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog16 hydrog ? ? A DG 7  N1 ? ? ? 1_555 B DC  6  N3 ? ? A DG 7  B DC  18 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog17 hydrog ? ? A DG 7  N2 ? ? ? 1_555 B DC  6  O2 ? ? A DG 7  B DC  18 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog18 hydrog ? ? A DG 7  O6 ? ? ? 1_555 B DC  6  N4 ? ? A DG 7  B DC  18 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog19 hydrog ? ? A DT 8  N3 ? ? ? 1_555 B DA  5  N1 ? ? A DT 8  B DA  17 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog20 hydrog ? ? A DT 8  O4 ? ? ? 1_555 B DA  5  N6 ? ? A DT 8  B DA  17 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog21 hydrog ? ? A DC 9  N3 ? ? ? 1_555 B DG  4  N1 ? ? A DC 9  B DG  16 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog22 hydrog ? ? A DC 9  N4 ? ? ? 1_555 B DG  4  O6 ? ? A DC 9  B DG  16 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog23 hydrog ? ? A DC 9  O2 ? ? ? 1_555 B DG  4  N2 ? ? A DC 9  B DG  16 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog24 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA  3  N1 ? ? A DT 10 B DA  15 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog25 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA  3  N6 ? ? A DT 10 B DA  15 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog26 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG  2  N1 ? ? A DC 11 B DG  14 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog27 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG  2  O6 ? ? A DC 11 B DG  14 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog28 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG  2  N2 ? ? A DC 11 B DG  14 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog29 hydrog ? ? A DC 12 N3 ? ? ? 1_555 B DG  1  N1 ? ? A DC 12 B DG  13 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog30 hydrog ? ? A DC 12 N4 ? ? ? 1_555 B DG  1  O6 ? ? A DC 12 B DG  13 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog31 hydrog ? ? A DC 12 O2 ? ? ? 1_555 B DG  1  N2 ? ? A DC 12 B DG  13 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog32 hydrog ? ? C DC 1  N3 ? ? ? 1_555 D DG  12 N1 ? ? C DC 25 D DG  48 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog33 hydrog ? ? C DC 1  N4 ? ? ? 1_555 D DG  12 O6 ? ? C DC 25 D DG  48 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog34 hydrog ? ? C DC 1  O2 ? ? ? 1_555 D DG  12 N2 ? ? C DC 25 D DG  48 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog35 hydrog ? ? C DC 2  N3 ? ? ? 1_555 D DG  11 N1 ? ? C DC 26 D DG  47 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog36 hydrog ? ? C DC 2  N4 ? ? ? 1_555 D DG  11 O6 ? ? C DC 26 D DG  47 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog37 hydrog ? ? C DC 2  O2 ? ? ? 1_555 D DG  11 N2 ? ? C DC 26 D DG  47 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog38 hydrog ? ? C DT 3  N3 ? ? ? 1_555 D DA  10 N1 ? ? C DT 27 D DA  46 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog39 hydrog ? ? C DT 3  O4 ? ? ? 1_555 D DA  10 N6 ? ? C DT 27 D DA  46 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog40 hydrog ? ? C DC 4  N3 ? ? ? 1_555 D DG  9  N1 ? ? C DC 28 D DG  45 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog41 hydrog ? ? C DC 4  N4 ? ? ? 1_555 D DG  9  O6 ? ? C DC 28 D DG  45 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog42 hydrog ? ? C DC 4  O2 ? ? ? 1_555 D DG  9  N2 ? ? C DC 28 D DG  45 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog43 hydrog ? ? C DT 5  N3 ? ? ? 1_555 D DA  8  N1 ? ? C DT 29 D DA  44 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog44 hydrog ? ? C DT 5  O4 ? ? ? 1_555 D DA  8  N6 ? ? C DT 29 D DA  44 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog45 hydrog ? ? C DG 6  N1 ? ? ? 1_555 D DC  7  N3 ? ? C DG 30 D DC  43 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog46 hydrog ? ? C DG 6  N2 ? ? ? 1_555 D DC  7  O2 ? ? C DG 30 D DC  43 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog47 hydrog ? ? C DG 6  O6 ? ? ? 1_555 D DC  7  N4 ? ? C DG 30 D DC  43 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog48 hydrog ? ? C DG 7  N1 ? ? ? 1_555 D DC  6  N3 ? ? C DG 31 D DC  42 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog49 hydrog ? ? C DG 7  N2 ? ? ? 1_555 D DC  6  O2 ? ? C DG 31 D DC  42 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog50 hydrog ? ? C DG 7  O6 ? ? ? 1_555 D DC  6  N4 ? ? C DG 31 D DC  42 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog51 hydrog ? ? C DT 8  N3 ? ? ? 1_555 D DA  5  N1 ? ? C DT 32 D DA  41 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog52 hydrog ? ? C DT 8  O4 ? ? ? 1_555 D DA  5  N6 ? ? C DT 32 D DA  41 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog53 hydrog ? ? C DC 9  N3 ? ? ? 1_555 D DG  4  N1 ? ? C DC 33 D DG  40 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog54 hydrog ? ? C DC 9  N4 ? ? ? 1_555 D DG  4  O6 ? ? C DC 33 D DG  40 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog55 hydrog ? ? C DC 9  O2 ? ? ? 1_555 D DG  4  N2 ? ? C DC 33 D DG  40 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog56 hydrog ? ? C DT 10 N3 ? ? ? 1_555 D DA  3  N1 ? ? C DT 34 D DA  39 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog57 hydrog ? ? C DT 10 O4 ? ? ? 1_555 D DA  3  N6 ? ? C DT 34 D DA  39 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog58 hydrog ? ? C DC 11 N3 ? ? ? 1_555 D DG  2  N1 ? ? C DC 35 D DG  38 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog59 hydrog ? ? C DC 11 N4 ? ? ? 1_555 D DG  2  O6 ? ? C DC 35 D DG  38 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog60 hydrog ? ? C DC 11 O2 ? ? ? 1_555 D DG  2  N2 ? ? C DC 35 D DG  38 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog61 hydrog ? ? C DC 12 N3 ? ? ? 1_555 D DG  1  N1 ? ? C DC 36 D DG  37 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog62 hydrog ? ? C DC 12 N4 ? ? ? 1_555 D DG  1  O6 ? ? C DC 36 D DG  37 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog63 hydrog ? ? C DC 12 O2 ? ? ? 1_555 D DG  1  N2 ? ? C DC 36 D DG  37 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
metalc ? ? 
hydrog ? ? 
# 
loop_
_pdbx_struct_conn_angle.id 
_pdbx_struct_conn_angle.ptnr1_label_atom_id 
_pdbx_struct_conn_angle.ptnr1_label_alt_id 
_pdbx_struct_conn_angle.ptnr1_label_asym_id 
_pdbx_struct_conn_angle.ptnr1_label_comp_id 
_pdbx_struct_conn_angle.ptnr1_label_seq_id 
_pdbx_struct_conn_angle.ptnr1_auth_atom_id 
_pdbx_struct_conn_angle.ptnr1_auth_asym_id 
_pdbx_struct_conn_angle.ptnr1_auth_comp_id 
_pdbx_struct_conn_angle.ptnr1_auth_seq_id 
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr1_symmetry 
_pdbx_struct_conn_angle.ptnr2_label_atom_id 
_pdbx_struct_conn_angle.ptnr2_label_alt_id 
_pdbx_struct_conn_angle.ptnr2_label_asym_id 
_pdbx_struct_conn_angle.ptnr2_label_comp_id 
_pdbx_struct_conn_angle.ptnr2_label_seq_id 
_pdbx_struct_conn_angle.ptnr2_auth_atom_id 
_pdbx_struct_conn_angle.ptnr2_auth_asym_id 
_pdbx_struct_conn_angle.ptnr2_auth_comp_id 
_pdbx_struct_conn_angle.ptnr2_auth_seq_id 
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr2_symmetry 
_pdbx_struct_conn_angle.ptnr3_label_atom_id 
_pdbx_struct_conn_angle.ptnr3_label_alt_id 
_pdbx_struct_conn_angle.ptnr3_label_asym_id 
_pdbx_struct_conn_angle.ptnr3_label_comp_id 
_pdbx_struct_conn_angle.ptnr3_label_seq_id 
_pdbx_struct_conn_angle.ptnr3_auth_atom_id 
_pdbx_struct_conn_angle.ptnr3_auth_asym_id 
_pdbx_struct_conn_angle.ptnr3_auth_comp_id 
_pdbx_struct_conn_angle.ptnr3_auth_seq_id 
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr3_symmetry 
_pdbx_struct_conn_angle.value 
_pdbx_struct_conn_angle.value_esd 
1  N7 ? A DG  6 ? A DG  6  ? 1_555 PT ? E LPT . ? A LPT 49 ? 1_555 N2 ? E LPT . ? A LPT 49 ? 1_555 159.5 ? 
2  N7 ? A DG  6 ? A DG  6  ? 1_555 PT ? E LPT . ? A LPT 49 ? 1_555 N1 ? E LPT . ? A LPT 49 ? 1_555 96.4  ? 
3  N2 ? E LPT . ? A LPT 49 ? 1_555 PT ? E LPT . ? A LPT 49 ? 1_555 N1 ? E LPT . ? A LPT 49 ? 1_555 87.6  ? 
4  N7 ? A DG  6 ? A DG  6  ? 1_555 PT ? E LPT . ? A LPT 49 ? 1_555 N7 ? A DG  7 ? A DG  7  ? 1_555 92.3  ? 
5  N2 ? E LPT . ? A LPT 49 ? 1_555 PT ? E LPT . ? A LPT 49 ? 1_555 N7 ? A DG  7 ? A DG  7  ? 1_555 87.5  ? 
6  N1 ? E LPT . ? A LPT 49 ? 1_555 PT ? E LPT . ? A LPT 49 ? 1_555 N7 ? A DG  7 ? A DG  7  ? 1_555 167.2 ? 
7  N7 ? C DG  6 ? C DG  30 ? 1_555 PT ? F LPT . ? C LPT 50 ? 1_555 N2 ? F LPT . ? C LPT 50 ? 1_555 167.6 ? 
8  N7 ? C DG  6 ? C DG  30 ? 1_555 PT ? F LPT . ? C LPT 50 ? 1_555 N1 ? F LPT . ? C LPT 50 ? 1_555 73.6  ? 
9  N2 ? F LPT . ? C LPT 50 ? 1_555 PT ? F LPT . ? C LPT 50 ? 1_555 N1 ? F LPT . ? C LPT 50 ? 1_555 99.1  ? 
10 N7 ? C DG  6 ? C DG  30 ? 1_555 PT ? F LPT . ? C LPT 50 ? 1_555 N7 ? C DG  7 ? C DG  31 ? 1_555 98.5  ? 
11 N2 ? F LPT . ? C LPT 50 ? 1_555 PT ? F LPT . ? C LPT 50 ? 1_555 N7 ? C DG  7 ? C DG  31 ? 1_555 88.2  ? 
12 N1 ? F LPT . ? C LPT 50 ? 1_555 PT ? F LPT . ? C LPT 50 ? 1_555 N7 ? C DG  7 ? C DG  31 ? 1_555 171.7 ? 
# 
loop_
_struct_site.id 
_struct_site.pdbx_evidence_code 
_struct_site.pdbx_auth_asym_id 
_struct_site.pdbx_auth_comp_id 
_struct_site.pdbx_auth_seq_id 
_struct_site.pdbx_auth_ins_code 
_struct_site.pdbx_num_residues 
_struct_site.details 
AC1 Software A LPT 49 ? 5 'BINDING SITE FOR RESIDUE LPT A 49' 
AC2 Software C LPT 50 ? 4 'BINDING SITE FOR RESIDUE LPT C 50' 
1   ?        ? ?   ?  ? ? ?                                   
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1 AC1 5 DG  A 6 ? DG  A 6   . ? 1_555 ? 
2 AC1 5 DG  A 7 ? DG  A 7   . ? 1_555 ? 
3 AC1 5 DT  A 8 ? DT  A 8   . ? 1_555 ? 
4 AC1 5 HOH G . ? HOH A 204 . ? 1_555 ? 
5 AC1 5 HOH G . ? HOH A 222 . ? 1_555 ? 
6 AC2 4 DT  C 5 ? DT  C 29  . ? 1_555 ? 
7 AC2 4 DG  C 6 ? DG  C 30  . ? 1_555 ? 
8 AC2 4 DG  C 7 ? DG  C 31  . ? 1_555 ? 
9 AC2 4 DT  C 8 ? DT  C 32  . ? 1_555 ? 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1 1 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 110.89 108.30 2.59 0.30 N 
2 1 "O4'" B DG 23 ? ? "C1'" B DG 23 ? ? N9 B DG 23 ? ? 110.44 108.30 2.14 0.30 N 
# 
_struct_site_keywords.site_id   1 
_struct_site_keywords.text      'COVALENT METAL BONDS' 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
DA  OP3    O  N N 1   
DA  P      P  N N 2   
DA  OP1    O  N N 3   
DA  OP2    O  N N 4   
DA  "O5'"  O  N N 5   
DA  "C5'"  C  N N 6   
DA  "C4'"  C  N R 7   
DA  "O4'"  O  N N 8   
DA  "C3'"  C  N S 9   
DA  "O3'"  O  N N 10  
DA  "C2'"  C  N N 11  
DA  "C1'"  C  N R 12  
DA  N9     N  Y N 13  
DA  C8     C  Y N 14  
DA  N7     N  Y N 15  
DA  C5     C  Y N 16  
DA  C6     C  Y N 17  
DA  N6     N  N N 18  
DA  N1     N  Y N 19  
DA  C2     C  Y N 20  
DA  N3     N  Y N 21  
DA  C4     C  Y N 22  
DA  HOP3   H  N N 23  
DA  HOP2   H  N N 24  
DA  "H5'"  H  N N 25  
DA  "H5''" H  N N 26  
DA  "H4'"  H  N N 27  
DA  "H3'"  H  N N 28  
DA  "HO3'" H  N N 29  
DA  "H2'"  H  N N 30  
DA  "H2''" H  N N 31  
DA  "H1'"  H  N N 32  
DA  H8     H  N N 33  
DA  H61    H  N N 34  
DA  H62    H  N N 35  
DA  H2     H  N N 36  
DC  OP3    O  N N 37  
DC  P      P  N N 38  
DC  OP1    O  N N 39  
DC  OP2    O  N N 40  
DC  "O5'"  O  N N 41  
DC  "C5'"  C  N N 42  
DC  "C4'"  C  N R 43  
DC  "O4'"  O  N N 44  
DC  "C3'"  C  N S 45  
DC  "O3'"  O  N N 46  
DC  "C2'"  C  N N 47  
DC  "C1'"  C  N R 48  
DC  N1     N  N N 49  
DC  C2     C  N N 50  
DC  O2     O  N N 51  
DC  N3     N  N N 52  
DC  C4     C  N N 53  
DC  N4     N  N N 54  
DC  C5     C  N N 55  
DC  C6     C  N N 56  
DC  HOP3   H  N N 57  
DC  HOP2   H  N N 58  
DC  "H5'"  H  N N 59  
DC  "H5''" H  N N 60  
DC  "H4'"  H  N N 61  
DC  "H3'"  H  N N 62  
DC  "HO3'" H  N N 63  
DC  "H2'"  H  N N 64  
DC  "H2''" H  N N 65  
DC  "H1'"  H  N N 66  
DC  H41    H  N N 67  
DC  H42    H  N N 68  
DC  H5     H  N N 69  
DC  H6     H  N N 70  
DG  OP3    O  N N 71  
DG  P      P  N N 72  
DG  OP1    O  N N 73  
DG  OP2    O  N N 74  
DG  "O5'"  O  N N 75  
DG  "C5'"  C  N N 76  
DG  "C4'"  C  N R 77  
DG  "O4'"  O  N N 78  
DG  "C3'"  C  N S 79  
DG  "O3'"  O  N N 80  
DG  "C2'"  C  N N 81  
DG  "C1'"  C  N R 82  
DG  N9     N  Y N 83  
DG  C8     C  Y N 84  
DG  N7     N  Y N 85  
DG  C5     C  Y N 86  
DG  C6     C  N N 87  
DG  O6     O  N N 88  
DG  N1     N  N N 89  
DG  C2     C  N N 90  
DG  N2     N  N N 91  
DG  N3     N  N N 92  
DG  C4     C  Y N 93  
DG  HOP3   H  N N 94  
DG  HOP2   H  N N 95  
DG  "H5'"  H  N N 96  
DG  "H5''" H  N N 97  
DG  "H4'"  H  N N 98  
DG  "H3'"  H  N N 99  
DG  "HO3'" H  N N 100 
DG  "H2'"  H  N N 101 
DG  "H2''" H  N N 102 
DG  "H1'"  H  N N 103 
DG  H8     H  N N 104 
DG  H1     H  N N 105 
DG  H21    H  N N 106 
DG  H22    H  N N 107 
DT  OP3    O  N N 108 
DT  P      P  N N 109 
DT  OP1    O  N N 110 
DT  OP2    O  N N 111 
DT  "O5'"  O  N N 112 
DT  "C5'"  C  N N 113 
DT  "C4'"  C  N R 114 
DT  "O4'"  O  N N 115 
DT  "C3'"  C  N S 116 
DT  "O3'"  O  N N 117 
DT  "C2'"  C  N N 118 
DT  "C1'"  C  N R 119 
DT  N1     N  N N 120 
DT  C2     C  N N 121 
DT  O2     O  N N 122 
DT  N3     N  N N 123 
DT  C4     C  N N 124 
DT  O4     O  N N 125 
DT  C5     C  N N 126 
DT  C7     C  N N 127 
DT  C6     C  N N 128 
DT  HOP3   H  N N 129 
DT  HOP2   H  N N 130 
DT  "H5'"  H  N N 131 
DT  "H5''" H  N N 132 
DT  "H4'"  H  N N 133 
DT  "H3'"  H  N N 134 
DT  "HO3'" H  N N 135 
DT  "H2'"  H  N N 136 
DT  "H2''" H  N N 137 
DT  "H1'"  H  N N 138 
DT  H3     H  N N 139 
DT  H71    H  N N 140 
DT  H72    H  N N 141 
DT  H73    H  N N 142 
DT  H6     H  N N 143 
HOH O      O  N N 144 
HOH H1     H  N N 145 
HOH H2     H  N N 146 
LPT C8     C  N N 147 
LPT C7     C  N N 148 
LPT C6     C  N N 149 
LPT C5     C  N N 150 
LPT C4     C  N N 151 
LPT C3     C  N N 152 
LPT N2     N  N N 153 
LPT N1     N  N N 154 
LPT PT     PT N N 155 
LPT H81    H  N N 156 
LPT H82    H  N N 157 
LPT H71    H  N N 158 
LPT H72    H  N N 159 
LPT H61    H  N N 160 
LPT H62    H  N N 161 
LPT H51    H  N N 162 
LPT H52    H  N N 163 
LPT H41    H  N N 164 
LPT H42    H  N N 165 
LPT H3     H  N N 166 
LPT HN21   H  N N 167 
LPT HN22   H  N N 168 
LPT HN11   H  N N 169 
LPT HN12   H  N N 170 
LPT HN13   H  N N 171 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DA  OP3   P      sing N N 1   
DA  OP3   HOP3   sing N N 2   
DA  P     OP1    doub N N 3   
DA  P     OP2    sing N N 4   
DA  P     "O5'"  sing N N 5   
DA  OP2   HOP2   sing N N 6   
DA  "O5'" "C5'"  sing N N 7   
DA  "C5'" "C4'"  sing N N 8   
DA  "C5'" "H5'"  sing N N 9   
DA  "C5'" "H5''" sing N N 10  
DA  "C4'" "O4'"  sing N N 11  
DA  "C4'" "C3'"  sing N N 12  
DA  "C4'" "H4'"  sing N N 13  
DA  "O4'" "C1'"  sing N N 14  
DA  "C3'" "O3'"  sing N N 15  
DA  "C3'" "C2'"  sing N N 16  
DA  "C3'" "H3'"  sing N N 17  
DA  "O3'" "HO3'" sing N N 18  
DA  "C2'" "C1'"  sing N N 19  
DA  "C2'" "H2'"  sing N N 20  
DA  "C2'" "H2''" sing N N 21  
DA  "C1'" N9     sing N N 22  
DA  "C1'" "H1'"  sing N N 23  
DA  N9    C8     sing Y N 24  
DA  N9    C4     sing Y N 25  
DA  C8    N7     doub Y N 26  
DA  C8    H8     sing N N 27  
DA  N7    C5     sing Y N 28  
DA  C5    C6     sing Y N 29  
DA  C5    C4     doub Y N 30  
DA  C6    N6     sing N N 31  
DA  C6    N1     doub Y N 32  
DA  N6    H61    sing N N 33  
DA  N6    H62    sing N N 34  
DA  N1    C2     sing Y N 35  
DA  C2    N3     doub Y N 36  
DA  C2    H2     sing N N 37  
DA  N3    C4     sing Y N 38  
DC  OP3   P      sing N N 39  
DC  OP3   HOP3   sing N N 40  
DC  P     OP1    doub N N 41  
DC  P     OP2    sing N N 42  
DC  P     "O5'"  sing N N 43  
DC  OP2   HOP2   sing N N 44  
DC  "O5'" "C5'"  sing N N 45  
DC  "C5'" "C4'"  sing N N 46  
DC  "C5'" "H5'"  sing N N 47  
DC  "C5'" "H5''" sing N N 48  
DC  "C4'" "O4'"  sing N N 49  
DC  "C4'" "C3'"  sing N N 50  
DC  "C4'" "H4'"  sing N N 51  
DC  "O4'" "C1'"  sing N N 52  
DC  "C3'" "O3'"  sing N N 53  
DC  "C3'" "C2'"  sing N N 54  
DC  "C3'" "H3'"  sing N N 55  
DC  "O3'" "HO3'" sing N N 56  
DC  "C2'" "C1'"  sing N N 57  
DC  "C2'" "H2'"  sing N N 58  
DC  "C2'" "H2''" sing N N 59  
DC  "C1'" N1     sing N N 60  
DC  "C1'" "H1'"  sing N N 61  
DC  N1    C2     sing N N 62  
DC  N1    C6     sing N N 63  
DC  C2    O2     doub N N 64  
DC  C2    N3     sing N N 65  
DC  N3    C4     doub N N 66  
DC  C4    N4     sing N N 67  
DC  C4    C5     sing N N 68  
DC  N4    H41    sing N N 69  
DC  N4    H42    sing N N 70  
DC  C5    C6     doub N N 71  
DC  C5    H5     sing N N 72  
DC  C6    H6     sing N N 73  
DG  OP3   P      sing N N 74  
DG  OP3   HOP3   sing N N 75  
DG  P     OP1    doub N N 76  
DG  P     OP2    sing N N 77  
DG  P     "O5'"  sing N N 78  
DG  OP2   HOP2   sing N N 79  
DG  "O5'" "C5'"  sing N N 80  
DG  "C5'" "C4'"  sing N N 81  
DG  "C5'" "H5'"  sing N N 82  
DG  "C5'" "H5''" sing N N 83  
DG  "C4'" "O4'"  sing N N 84  
DG  "C4'" "C3'"  sing N N 85  
DG  "C4'" "H4'"  sing N N 86  
DG  "O4'" "C1'"  sing N N 87  
DG  "C3'" "O3'"  sing N N 88  
DG  "C3'" "C2'"  sing N N 89  
DG  "C3'" "H3'"  sing N N 90  
DG  "O3'" "HO3'" sing N N 91  
DG  "C2'" "C1'"  sing N N 92  
DG  "C2'" "H2'"  sing N N 93  
DG  "C2'" "H2''" sing N N 94  
DG  "C1'" N9     sing N N 95  
DG  "C1'" "H1'"  sing N N 96  
DG  N9    C8     sing Y N 97  
DG  N9    C4     sing Y N 98  
DG  C8    N7     doub Y N 99  
DG  C8    H8     sing N N 100 
DG  N7    C5     sing Y N 101 
DG  C5    C6     sing N N 102 
DG  C5    C4     doub Y N 103 
DG  C6    O6     doub N N 104 
DG  C6    N1     sing N N 105 
DG  N1    C2     sing N N 106 
DG  N1    H1     sing N N 107 
DG  C2    N2     sing N N 108 
DG  C2    N3     doub N N 109 
DG  N2    H21    sing N N 110 
DG  N2    H22    sing N N 111 
DG  N3    C4     sing N N 112 
DT  OP3   P      sing N N 113 
DT  OP3   HOP3   sing N N 114 
DT  P     OP1    doub N N 115 
DT  P     OP2    sing N N 116 
DT  P     "O5'"  sing N N 117 
DT  OP2   HOP2   sing N N 118 
DT  "O5'" "C5'"  sing N N 119 
DT  "C5'" "C4'"  sing N N 120 
DT  "C5'" "H5'"  sing N N 121 
DT  "C5'" "H5''" sing N N 122 
DT  "C4'" "O4'"  sing N N 123 
DT  "C4'" "C3'"  sing N N 124 
DT  "C4'" "H4'"  sing N N 125 
DT  "O4'" "C1'"  sing N N 126 
DT  "C3'" "O3'"  sing N N 127 
DT  "C3'" "C2'"  sing N N 128 
DT  "C3'" "H3'"  sing N N 129 
DT  "O3'" "HO3'" sing N N 130 
DT  "C2'" "C1'"  sing N N 131 
DT  "C2'" "H2'"  sing N N 132 
DT  "C2'" "H2''" sing N N 133 
DT  "C1'" N1     sing N N 134 
DT  "C1'" "H1'"  sing N N 135 
DT  N1    C2     sing N N 136 
DT  N1    C6     sing N N 137 
DT  C2    O2     doub N N 138 
DT  C2    N3     sing N N 139 
DT  N3    C4     sing N N 140 
DT  N3    H3     sing N N 141 
DT  C4    O4     doub N N 142 
DT  C4    C5     sing N N 143 
DT  C5    C7     sing N N 144 
DT  C5    C6     doub N N 145 
DT  C7    H71    sing N N 146 
DT  C7    H72    sing N N 147 
DT  C7    H73    sing N N 148 
DT  C6    H6     sing N N 149 
HOH O     H1     sing N N 150 
HOH O     H2     sing N N 151 
LPT C8    C7     sing N N 152 
LPT C8    C3     sing N N 153 
LPT C8    H81    sing N N 154 
LPT C8    H82    sing N N 155 
LPT C7    C6     sing N N 156 
LPT C7    H71    sing N N 157 
LPT C7    H72    sing N N 158 
LPT C6    C5     sing N N 159 
LPT C6    H61    sing N N 160 
LPT C6    H62    sing N N 161 
LPT C5    C4     sing N N 162 
LPT C5    H51    sing N N 163 
LPT C5    H52    sing N N 164 
LPT C4    C3     sing N N 165 
LPT C4    H41    sing N N 166 
LPT C4    H42    sing N N 167 
LPT C3    N2     sing N N 168 
LPT C3    H3     sing N N 169 
LPT N2    PT     sing N N 170 
LPT N2    HN21   sing N N 171 
LPT N2    HN22   sing N N 172 
LPT N1    PT     sing N N 173 
LPT N1    HN11   sing N N 174 
LPT N1    HN12   sing N N 175 
LPT N1    HN13   sing N N 176 
# 
loop_
_ndb_struct_conf_na.entry_id 
_ndb_struct_conf_na.feature 
1LU5 'double helix'        
1LU5 'a-form double helix' 
1LU5 'b-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DC 1  1_555 B DG 12 1_555 0.649  -0.242 -0.197 16.638  -6.876  0.013  1  A_DC1:DG24_B  A 1  ? B 24 ? 19 1 
1 A DC 2  1_555 B DG 11 1_555 0.569  -0.119 -0.208 4.376   -2.902  1.034  2  A_DC2:DG23_B  A 2  ? B 23 ? 19 1 
1 A DT 3  1_555 B DA 10 1_555 -0.044 0.064  -0.174 3.631   -12.501 14.439 3  A_DT3:DA22_B  A 3  ? B 22 ? ?  1 
1 A DC 4  1_555 B DG 9  1_555 0.393  0.062  -0.243 -1.373  -1.036  2.865  4  A_DC4:DG21_B  A 4  ? B 21 ? 19 1 
1 A DT 5  1_555 B DA 8  1_555 -0.091 -0.295 0.257  2.831   -5.198  -1.504 5  A_DT5:DA20_B  A 5  ? B 20 ? 20 1 
1 A DG 6  1_555 B DC 7  1_555 -0.343 0.021  0.176  19.479  -15.020 -0.987 6  A_DG6:DC19_B  A 6  ? B 19 ? 19 1 
1 A DG 7  1_555 B DC 6  1_555 -0.182 0.057  -0.033 -6.914  -13.198 3.507  7  A_DG7:DC18_B  A 7  ? B 18 ? 19 1 
1 A DT 8  1_555 B DA 5  1_555 -0.209 -0.306 -0.662 -0.657  -21.393 4.441  8  A_DT8:DA17_B  A 8  ? B 17 ? 20 1 
1 A DC 9  1_555 B DG 4  1_555 0.248  -0.353 0.112  -2.690  -13.362 1.012  9  A_DC9:DG16_B  A 9  ? B 16 ? 19 1 
1 A DT 10 1_555 B DA 3  1_555 -0.688 -0.284 0.132  2.768   -8.937  -5.152 10 A_DT10:DA15_B A 10 ? B 15 ? 20 1 
1 A DC 11 1_555 B DG 2  1_555 -0.047 -0.166 0.031  0.417   -11.417 -6.231 11 A_DC11:DG14_B A 11 ? B 14 ? 19 1 
1 A DC 12 1_555 B DG 1  1_555 0.643  -0.102 0.131  -6.664  -3.741  2.772  12 A_DC12:DG13_B A 12 ? B 13 ? 19 1 
1 C DC 1  1_555 D DG 12 1_555 0.695  -0.177 0.018  11.888  -3.584  -1.258 13 C_DC25:DG48_D C 25 ? D 48 ? 19 1 
1 C DC 2  1_555 D DG 11 1_555 0.502  -0.123 -0.254 9.167   -2.726  4.777  14 C_DC26:DG47_D C 26 ? D 47 ? 19 1 
1 C DT 3  1_555 D DA 10 1_555 -0.319 -0.218 -0.203 4.856   -7.515  2.891  15 C_DT27:DA46_D C 27 ? D 46 ? 20 1 
1 C DC 4  1_555 D DG 9  1_555 0.070  0.349  0.135  -3.104  -5.048  2.585  16 C_DC28:DG45_D C 28 ? D 45 ? 19 1 
1 C DT 5  1_555 D DA 8  1_555 -0.143 -0.187 0.172  4.278   -5.197  -0.960 17 C_DT29:DA44_D C 29 ? D 44 ? 20 1 
1 C DG 6  1_555 D DC 7  1_555 -0.255 0.122  0.510  21.673  -16.360 4.027  18 C_DG30:DC43_D C 30 ? D 43 ? 19 1 
1 C DG 7  1_555 D DC 6  1_555 -0.144 -0.030 0.273  -4.493  -16.813 0.465  19 C_DG31:DC42_D C 31 ? D 42 ? 19 1 
1 C DT 8  1_555 D DA 5  1_555 -0.614 -0.145 -0.245 -11.827 -21.810 -2.017 20 C_DT32:DA41_D C 32 ? D 41 ? 20 1 
1 C DC 9  1_555 D DG 4  1_555 -0.140 -0.305 0.004  -10.895 -6.412  -1.466 21 C_DC33:DG40_D C 33 ? D 40 ? 19 1 
1 C DT 10 1_555 D DA 3  1_555 -0.664 -0.071 0.466  -7.263  -2.725  0.132  22 C_DT34:DA39_D C 34 ? D 39 ? 20 1 
1 C DC 11 1_555 D DG 2  1_555 -0.026 -0.005 0.269  0.361   -11.602 -4.536 23 C_DC35:DG38_D C 35 ? D 38 ? 19 1 
1 C DC 12 1_555 D DG 1  1_555 1.085  -0.305 0.336  -10.105 -8.034  7.515  24 C_DC36:DG37_D C 36 ? D 37 ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DC 1  1_555 B DG 12 1_555 A DC 2  1_555 B DG 11 1_555 -0.992 -2.280 3.536 -3.279 4.171  25.843 -6.163 1.258  3.233 9.203  
7.234  26.373 1  AA_DC1DC2:DG23DG24_BB   A 1  ? B 24 ? A 2  ? B 23 ? 
1 A DC 2  1_555 B DG 11 1_555 A DT 3  1_555 B DA 10 1_555 0.172  -1.622 3.307 2.399  2.415  28.362 -3.833 0.192  3.164 4.906  
-4.874 28.562 2  AA_DC2DT3:DA22DG23_BB   A 2  ? B 23 ? A 3  ? B 22 ? 
1 A DT 3  1_555 B DA 10 1_555 A DC 4  1_555 B DG 9  1_555 -0.327 -1.440 3.413 -1.081 9.236  33.973 -3.743 0.381  2.942 15.450 
1.808  35.187 3  AA_DT3DC4:DG21DA22_BB   A 3  ? B 22 ? A 4  ? B 21 ? 
1 A DC 4  1_555 B DG 9  1_555 A DT 5  1_555 B DA 8  1_555 -0.482 -1.685 3.227 -1.674 5.036  28.919 -4.345 0.610  2.920 9.977  
3.317  29.392 4  AA_DC4DT5:DA20DG21_BB   A 4  ? B 21 ? A 5  ? B 20 ? 
1 A DT 5  1_555 B DA 8  1_555 A DG 6  1_555 B DC 7  1_555 -0.699 -1.357 2.937 -0.328 6.227  25.716 -4.374 1.454  2.551 13.736 
0.722  26.449 5  AA_DT5DG6:DC19DA20_BB   A 5  ? B 20 ? A 6  ? B 19 ? 
1 A DG 6  1_555 B DC 7  1_555 A DG 7  1_555 B DC 6  1_555 1.277  -1.619 3.711 1.655  28.507 32.494 -4.977 -1.581 1.837 42.218 
-2.452 43.002 6  AA_DG6DG7:DC18DC19_BB   A 6  ? B 19 ? A 7  ? B 18 ? 
1 A DG 7  1_555 B DC 6  1_555 A DT 8  1_555 B DA 5  1_555 -0.743 -0.882 3.041 5.802  3.496  34.535 -1.928 2.007  2.784 5.819  
-9.657 35.173 7  AA_DG7DT8:DA17DC18_BB   A 7  ? B 18 ? A 8  ? B 17 ? 
1 A DT 8  1_555 B DA 5  1_555 A DC 9  1_555 B DG 4  1_555 0.622  -0.623 3.399 -2.118 4.304  34.817 -1.690 -1.353 3.259 7.151  
3.519  35.136 8  AA_DT8DC9:DG16DA17_BB   A 8  ? B 17 ? A 9  ? B 16 ? 
1 A DC 9  1_555 B DG 4  1_555 A DT 10 1_555 B DA 3  1_555 -0.493 -0.494 3.233 0.468  7.302  28.981 -2.429 1.050  3.013 14.304 
-0.918 29.871 9  AA_DC9DT10:DA15DG16_BB  A 9  ? B 16 ? A 10 ? B 15 ? 
1 A DT 10 1_555 B DA 3  1_555 A DC 11 1_555 B DG 2  1_555 0.119  -0.224 3.332 4.694  -1.529 40.839 -0.150 0.350  3.331 -2.182 
-6.698 41.124 10 AA_DT10DC11:DG14DA15_BB A 10 ? B 15 ? A 11 ? B 14 ? 
1 A DC 11 1_555 B DG 2  1_555 A DC 12 1_555 B DG 1  1_555 0.081  -0.413 3.359 -1.324 6.194  32.722 -1.768 -0.365 3.224 10.867 
2.323  33.313 11 AA_DC11DC12:DG13DG14_BB A 11 ? B 14 ? A 12 ? B 13 ? 
1 C DC 1  1_555 D DG 12 1_555 C DC 2  1_555 D DG 11 1_555 -0.636 -2.316 3.239 0.534  2.675  26.530 -5.688 1.512  2.982 5.810  
-1.160 26.668 12 CC_DC25DC26:DG47DG48_DD C 25 ? D 48 ? C 26 ? D 47 ? 
1 C DC 2  1_555 D DG 11 1_555 C DT 3  1_555 D DA 10 1_555 -0.436 -1.813 3.479 -0.009 2.674  28.404 -4.312 0.882  3.298 5.435  
0.018  28.527 13 CC_DC26DT27:DA46DG47_DD C 26 ? D 47 ? C 27 ? D 46 ? 
1 C DT 3  1_555 D DA 10 1_555 C DC 4  1_555 D DG 9  1_555 0.391  -1.587 3.401 -0.276 10.360 32.443 -4.313 -0.711 2.775 17.980 
0.479  34.015 14 CC_DT27DC28:DG45DA46_DD C 27 ? D 46 ? C 28 ? D 45 ? 
1 C DC 4  1_555 D DG 9  1_555 C DT 5  1_555 D DA 8  1_555 -0.262 -1.634 3.154 -0.785 5.546  30.934 -3.975 0.347  2.831 10.291 
1.457  31.425 15 CC_DC28DT29:DA44DG45_DD C 28 ? D 45 ? C 29 ? D 44 ? 
1 C DT 5  1_555 D DA 8  1_555 C DG 6  1_555 D DC 7  1_555 -0.629 -1.529 2.925 -2.416 3.830  25.594 -4.316 0.820  2.718 8.560  
5.399  25.985 16 CC_DT29DG30:DC43DA44_DD C 29 ? D 44 ? C 30 ? D 43 ? 
1 C DG 6  1_555 D DC 7  1_555 C DG 7  1_555 D DC 6  1_555 1.173  -1.726 3.675 2.568  26.173 32.663 -5.104 -1.384 1.919 39.530 
-3.879 41.709 17 CC_DG30DG31:DC42DC43_DD C 30 ? D 43 ? C 31 ? D 42 ? 
1 C DG 7  1_555 D DC 6  1_555 C DT 8  1_555 D DA 5  1_555 -0.751 -1.227 3.253 4.157  4.102  33.511 -2.726 1.922  2.974 7.048  
-7.142 34.002 18 CC_DG31DT32:DA41DC42_DD C 31 ? D 42 ? C 32 ? D 41 ? 
1 C DT 8  1_555 D DA 5  1_555 C DC 9  1_555 D DG 4  1_555 0.559  -0.819 3.255 0.848  5.175  37.420 -1.920 -0.756 3.130 8.018  
-1.313 37.773 19 CC_DT32DC33:DG40DA41_DD C 32 ? D 41 ? C 33 ? D 40 ? 
1 C DC 9  1_555 D DG 4  1_555 C DT 10 1_555 D DA 3  1_555 -0.196 -0.575 3.385 -1.624 3.537  28.881 -1.935 0.025  3.298 7.050  
3.238  29.137 20 CC_DC33DT34:DA39DG40_DD C 33 ? D 40 ? C 34 ? D 39 ? 
1 C DT 10 1_555 D DA 3  1_555 C DC 11 1_555 D DG 2  1_555 0.059  -0.382 3.119 2.877  0.977  39.257 -0.678 0.236  3.106 1.452  
-4.274 39.370 21 CC_DT34DC35:DG38DA39_DD C 34 ? D 39 ? C 35 ? D 38 ? 
1 C DC 11 1_555 D DG 2  1_555 C DC 12 1_555 D DG 1  1_555 0.670  -0.302 3.469 2.089  1.735  36.249 -0.741 -0.764 3.483 2.783  
-3.352 36.347 22 CC_DC35DC36:DG37DG38_DD C 35 ? D 38 ? C 36 ? D 37 ? 
# 
_pdbx_initial_refinement_model.id               1 
_pdbx_initial_refinement_model.entity_id_list   ? 
_pdbx_initial_refinement_model.type             'experimental model' 
_pdbx_initial_refinement_model.source_name      PDB 
_pdbx_initial_refinement_model.accession_code   1AIO 
_pdbx_initial_refinement_model.details          'PDB Entry 1AIO' 
# 
_atom_sites.entry_id                    1LU5 
_atom_sites.fract_transf_matrix[1][1]   0.031602 
_atom_sites.fract_transf_matrix[1][2]   -0.004802 
_atom_sites.fract_transf_matrix[1][3]   -0.003113 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.028382 
_atom_sites.fract_transf_matrix[2][3]   -0.004795 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.021947 
_atom_sites.fract_transf_vector[1]      0.000000 
_atom_sites.fract_transf_vector[2]      0.000000 
_atom_sites.fract_transf_vector[3]      0.000000 
# 
loop_
_atom_type.symbol 
C  
N  
O  
P  
PT 
# 
loop_