HEADER LYASE 22-MAY-02 1LUG TITLE FULL MATRIX ERROR ANALYSIS OF CARBONIC ANHYDRASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBONIC ANHYDRASE II; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CARBONATE DEHYDRATASE II, CA-II; COMPND 5 EC: 4.2.1.1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS ERROR ANALYSIS, FULL-MATRIX, METALLOENZYME, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR E.A.MERRITT,I.LE TRONG,C.A.BEHNKE REVDAT 7 14-FEB-24 1LUG 1 REMARK LINK REVDAT 6 28-MAR-12 1LUG 1 JRNL REVDAT 5 13-JUL-11 1LUG 1 VERSN REVDAT 4 28-APR-10 1LUG 1 JRNL REVDAT 3 20-OCT-09 1LUG 1 HETSYN REVDAT 2 24-FEB-09 1LUG 1 VERSN REVDAT 1 09-SEP-03 1LUG 0 JRNL AUTH C.A.BEHNKE,I.LE TRONG,J.W.GODDEN,E.A.MERRITT,D.C.TELLER, JRNL AUTH 2 J.BAJORATH,R.E.STENKAMP JRNL TITL ATOMIC RESOLUTION STUDIES OF CARBONIC ANHYDRASE II. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 66 616 2010 JRNL REFN ISSN 0907-4449 JRNL PMID 20445237 JRNL DOI 10.1107/S0907444910006554 REMARK 2 REMARK 2 RESOLUTION. 0.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 0.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 CROSS-VALIDATION METHOD : FREE R REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.120 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.141 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 7313 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 147440 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : NULL REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.109 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.130 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 6041 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 115415 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2064 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 41 REMARK 3 SOLVENT ATOMS : 337 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 2430.6 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : 2018.0 REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 18 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 22635 REMARK 3 NUMBER OF RESTRAINTS : 27936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.030 REMARK 3 ANGLE DISTANCES (A) : 0.048 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : 0.000 REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : 0.033 REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.128 REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.170 REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.096 REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : 0.012 REMARK 3 SIMILAR ADP COMPONENTS (A**2) : 0.049 REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : 0.106 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: MOEWS & KRETSINGER, J.MOL.BIOL.91(1973)201-228 REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH & HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ANISOTROPIC SCALING APPLIED BY THE REMARK 3 METHOD OF PARKIN, MOEZZI & HOPE, J.APPL.CRYST.28(1995)53-56 REMARK 4 REMARK 4 1LUG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JUN-02. REMARK 100 THE DEPOSITION ID IS D_1000016281. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUN-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.78 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 172463 REMARK 200 RESOLUTION RANGE HIGH (A) : 0.900 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 0.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 0.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.44000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.340 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: ISOMORPHOUS STRUCTURE REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: 2CBA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, TRIS-CL, P REMARK 280 -HYDROXYMERCURIBENZOATE, DMSO, PH 7.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 20.65550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 2 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2120 O HOH A 2296 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 2 CA SER A 2 CB 0.098 REMARK 500 SER A 2 CB SER A 2 OG 0.117 REMARK 500 HIS A 3 CG HIS A 3 CD2 0.057 REMARK 500 HIS A 3 CA HIS A 3 C 0.174 REMARK 500 HIS A 3 C HIS A 3 O 0.155 REMARK 500 GLU A 14 CD GLU A 14 OE2 0.111 REMARK 500 ARG A 27 CD ARG A 27 NE -0.186 REMARK 500 HIS A 64 CG HIS A 64 ND1 0.187 REMARK 500 HIS A 64 ND1 HIS A 64 CE1 -0.194 REMARK 500 LYS A 76 C ALA A 77 N -0.140 REMARK 500 LYS A 80 CB LYS A 80 CG -0.166 REMARK 500 SER A 151 CB SER A 151 OG -0.099 REMARK 500 LYS A 158 CE LYS A 158 NZ 0.159 REMARK 500 SER A 165 CB SER A 165 OG -0.079 REMARK 500 ARG A 181 CZ ARG A 181 NH1 0.079 REMARK 500 GLU A 213 CD GLU A 213 OE1 -0.068 REMARK 500 GLU A 233 CG GLU A 233 CD -0.099 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER A 2 CA - C - N ANGL. DEV. = 14.5 DEGREES REMARK 500 HIS A 3 C - N - CA ANGL. DEV. = 38.2 DEGREES REMARK 500 HIS A 3 CB - CA - C ANGL. DEV. = -18.2 DEGREES REMARK 500 HIS A 3 N - CA - CB ANGL. DEV. = 18.9 DEGREES REMARK 500 HIS A 3 ND1 - CG - CD2 ANGL. DEV. = -9.4 DEGREES REMARK 500 HIS A 3 CG - ND1 - CE1 ANGL. DEV. = 9.4 DEGREES REMARK 500 HIS A 3 CA - C - O ANGL. DEV. = -27.3 DEGREES REMARK 500 HIS A 3 CA - C - N ANGL. DEV. = 28.4 DEGREES REMARK 500 HIS A 4 C - N - CA ANGL. DEV. = 15.7 DEGREES REMARK 500 HIS A 10 ND1 - CE1 - NE2 ANGL. DEV. = -7.6 DEGREES REMARK 500 HIS A 10 CE1 - NE2 - CD2 ANGL. DEV. = 8.6 DEGREES REMARK 500 GLU A 14 OE1 - CD - OE2 ANGL. DEV. = 9.9 DEGREES REMARK 500 GLU A 14 CG - CD - OE1 ANGL. DEV. = -15.9 DEGREES REMARK 500 ASP A 19 CB - CG - OD1 ANGL. DEV. = 9.8 DEGREES REMARK 500 ARG A 27 CG - CD - NE ANGL. DEV. = 21.9 DEGREES REMARK 500 ARG A 27 CD - NE - CZ ANGL. DEV. = 12.6 DEGREES REMARK 500 ARG A 27 NE - CZ - NH1 ANGL. DEV. = 8.8 DEGREES REMARK 500 ARG A 27 NE - CZ - NH2 ANGL. DEV. = -7.0 DEGREES REMARK 500 GLN A 53 CA - CB - CG ANGL. DEV. = -13.3 DEGREES REMARK 500 ARG A 58 NE - CZ - NH1 ANGL. DEV. = 7.6 DEGREES REMARK 500 ARG A 58 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 HIS A 64 ND1 - CG - CD2 ANGL. DEV. = -8.9 DEGREES REMARK 500 HIS A 64 ND1 - CE1 - NE2 ANGL. DEV. = 9.7 DEGREES REMARK 500 GLN A 74 CG - CD - OE1 ANGL. DEV. = -12.4 DEGREES REMARK 500 ASP A 75 N - CA - CB ANGL. DEV. = -13.8 DEGREES REMARK 500 ASP A 75 N - CA - CB ANGL. DEV. = 19.2 DEGREES REMARK 500 ASP A 75 CB - CG - OD1 ANGL. DEV. = 11.2 DEGREES REMARK 500 ASP A 75 CB - CG - OD2 ANGL. DEV. = -9.2 DEGREES REMARK 500 LYS A 76 O - C - N ANGL. DEV. = -10.0 DEGREES REMARK 500 ALA A 77 C - N - CA ANGL. DEV. = 18.6 DEGREES REMARK 500 ARG A 89 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 LYS A 126 CD - CE - NZ ANGL. DEV. = -14.1 DEGREES REMARK 500 ASP A 129 CB - CA - C ANGL. DEV. = 13.7 DEGREES REMARK 500 ASP A 129 CA - CB - CG ANGL. DEV. = 22.3 DEGREES REMARK 500 ASP A 161 CB - CG - OD2 ANGL. DEV. = -8.4 DEGREES REMARK 500 ASP A 164 CB - CG - OD1 ANGL. DEV. = 13.7 DEGREES REMARK 500 ASP A 164 CB - CG - OD2 ANGL. DEV. = -11.5 DEGREES REMARK 500 LYS A 171 CD - CE - NZ ANGL. DEV. = 17.6 DEGREES REMARK 500 ARG A 181 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 181 NE - CZ - NH2 ANGL. DEV. = -6.0 DEGREES REMARK 500 CYS A 205 CB - CA - C ANGL. DEV. = -16.6 DEGREES REMARK 500 GLU A 220 OE1 - CD - OE2 ANGL. DEV. = -8.2 DEGREES REMARK 500 LYS A 224 CB - CG - CD ANGL. DEV. = 17.0 DEGREES REMARK 500 PHE A 225 CB - CG - CD2 ANGL. DEV. = -4.6 DEGREES REMARK 500 PHE A 225 CB - CG - CD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 PRO A 236 C - N - CA ANGL. DEV. = 9.6 DEGREES REMARK 500 LYS A 251 CA - CB - CG ANGL. DEV. = 20.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 3 23.97 173.66 REMARK 500 ARG A 27 56.98 -144.39 REMARK 500 LYS A 76 -96.52 -120.20 REMARK 500 GLU A 106 -62.84 -92.72 REMARK 500 LYS A 111 -3.44 75.31 REMARK 500 PHE A 175 65.55 -151.98 REMARK 500 ASN A 243 46.67 -94.94 REMARK 500 LYS A 251 -141.89 58.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 2 HIS A 3 -117.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 THE COMPLETE SUA LIGAND WAS NOT VISIBLE REMARK 600 IN THE DENSITY. MORE ATOMS WERE SEEN IN REMARK 600 THE DENSITY FOR ALTERNATE CONFORMATION A REMARK 600 THAN FOR ALTERNATE CONFORMATION B. REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 SUA A 1002 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 94 NE2 REMARK 620 2 HIS A 96 NE2 103.7 REMARK 620 3 HIS A 119 ND1 112.7 98.6 REMARK 620 4 SUA A1002 N1 110.1 113.9 116.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MBO A1205 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 134 O REMARK 620 2 MBO A1205 CE1 126.7 REMARK 620 3 GLN A 136 O 111.2 74.6 REMARK 620 4 CYS A 205 SG 84.0 149.2 93.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MBO A1205 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 136 O REMARK 620 2 MBO A1205 CE1 100.9 REMARK 620 3 GLU A 204 O 94.1 84.5 REMARK 620 4 CYS A 205 SG 83.0 175.9 94.3 REMARK 620 5 HOH A1905 O 131.2 99.3 131.8 78.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A1005 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SUA A1002 S2 REMARK 620 2 SUA A1002 N2 41.0 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MBO A 1205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SUA A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1004 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3K34 RELATED DB: PDB REMARK 900 HUMAN CARBONIC ANHYDRASE II WITH A SULFONAMIDE INHIBITOR DBREF 1LUG A 2 260 UNP P00918 CAH2_HUMAN 1 259 SEQRES 1 A 259 SER HIS HIS TRP GLY TYR GLY LYS HIS ASN GLY PRO GLU SEQRES 2 A 259 HIS TRP HIS LYS ASP PHE PRO ILE ALA LYS GLY GLU ARG SEQRES 3 A 259 GLN SER PRO VAL ASP ILE ASP THR HIS THR ALA LYS TYR SEQRES 4 A 259 ASP PRO SER LEU LYS PRO LEU SER VAL SER TYR ASP GLN SEQRES 5 A 259 ALA THR SER LEU ARG ILE LEU ASN ASN GLY HIS ALA PHE SEQRES 6 A 259 ASN VAL GLU PHE ASP ASP SER GLN ASP LYS ALA VAL LEU SEQRES 7 A 259 LYS GLY GLY PRO LEU ASP GLY THR TYR ARG LEU ILE GLN SEQRES 8 A 259 PHE HIS PHE HIS TRP GLY SER LEU ASP GLY GLN GLY SER SEQRES 9 A 259 GLU HIS THR VAL ASP LYS LYS LYS TYR ALA ALA GLU LEU SEQRES 10 A 259 HIS LEU VAL HIS TRP ASN THR LYS TYR GLY ASP PHE GLY SEQRES 11 A 259 LYS ALA VAL GLN GLN PRO ASP GLY LEU ALA VAL LEU GLY SEQRES 12 A 259 ILE PHE LEU LYS VAL GLY SER ALA LYS PRO GLY LEU GLN SEQRES 13 A 259 LYS VAL VAL ASP VAL LEU ASP SER ILE LYS THR LYS GLY SEQRES 14 A 259 LYS SER ALA ASP PHE THR ASN PHE ASP PRO ARG GLY LEU SEQRES 15 A 259 LEU PRO GLU SER LEU ASP TYR TRP THR TYR PRO GLY SER SEQRES 16 A 259 LEU THR THR PRO PRO LEU LEU GLU CYS VAL THR TRP ILE SEQRES 17 A 259 VAL LEU LYS GLU PRO ILE SER VAL SER SER GLU GLN VAL SEQRES 18 A 259 LEU LYS PHE ARG LYS LEU ASN PHE ASN GLY GLU GLY GLU SEQRES 19 A 259 PRO GLU GLU LEU MET VAL ASP ASN TRP ARG PRO ALA GLN SEQRES 20 A 259 PRO LEU LYS ASN ARG GLN ILE LYS ALA SER PHE LYS HET ZN A1001 1 HET HG A1005 1 HET MBO A1205 20 HET SUA A1002 18 HET GOL A1003 12 HET GOL A1004 6 HETNAM ZN ZINC ION HETNAM HG MERCURY (II) ION HETNAM MBO MERCURIBENZOIC ACID HETNAM SUA (4-SULFAMOYL-PHENYL)-THIOCARBAMIC ACID O-(2-THIOPHEN-3- HETNAM 2 SUA YL-ETHYL) ESTER HETNAM GOL GLYCEROL HETSYN SUA CARBONIC ANHYDRASE II INHIBITOR 16923 HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ZN ZN 2+ FORMUL 3 HG HG 2+ FORMUL 4 MBO C7 H5 HG O2 FORMUL 5 SUA C13 H14 N2 O3 S3 FORMUL 6 GOL 2(C3 H8 O3) FORMUL 8 HOH *337(H2 O) HELIX 1 1 HIS A 15 ASP A 19 5 5 HELIX 2 2 PHE A 20 GLY A 25 5 6 HELIX 3 3 LYS A 126 GLY A 128 5 3 HELIX 4 4 ASP A 129 VAL A 134 1 6 HELIX 5 5 LYS A 153 GLY A 155 5 3 HELIX 6 6 LEU A 156 LEU A 163 1 8 HELIX 7 7 ASP A 164 ILE A 166 5 3 HELIX 8 8 ASP A 179 LEU A 184 5 6 HELIX 9 9 SER A 218 ARG A 226 1 9 SHEET 1 A 2 ASP A 32 ILE A 33 0 SHEET 2 A 2 THR A 108 VAL A 109 1 O THR A 108 N ILE A 33 SHEET 1 B18 LYS A 39 TYR A 40 0 SHEET 2 B18 LYS A 256 ALA A 257 1 N ALA A 257 O LYS A 39 SHEET 3 B18 TYR A 190 GLY A 195 -1 N THR A 192 O LYS A 256 SHEET 4 B18 VAL A 206 LEU A 211 -1 O VAL A 206 N GLY A 195 SHEET 5 B18 LEU A 140 VAL A 149 1 O LEU A 140 N THR A 207 SHEET 6 B18 ILE A 215 VAL A 217 1 N ILE A 215 O PHE A 146 SHEET 7 B18 LEU A 140 VAL A 149 1 O PHE A 146 N ILE A 215 SHEET 8 B18 ILE A 215 VAL A 217 1 N ILE A 215 O PHE A 146 SHEET 9 B18 LEU A 140 VAL A 149 1 O PHE A 146 N ILE A 215 SHEET 10 B18 ALA A 116 ASN A 124 -1 O ALA A 116 N LEU A 147 SHEET 11 B18 TYR A 88 TRP A 97 -1 N ARG A 89 O TRP A 123 SHEET 12 B18 VAL A 78 GLY A 82 -1 N LEU A 79 O TYR A 88 SHEET 13 B18 LYS A 45 SER A 50 -1 N LYS A 45 O GLY A 82 SHEET 14 B18 VAL A 78 GLY A 82 -1 O VAL A 78 N SER A 50 SHEET 15 B18 TYR A 88 TRP A 97 -1 O TYR A 88 N LEU A 79 SHEET 16 B18 PHE A 66 PHE A 70 -1 N VAL A 68 O PHE A 93 SHEET 17 B18 SER A 56 ASN A 61 -1 N LEU A 57 O GLU A 69 SHEET 18 B18 SER A 172 ASP A 174 -1 O ALA A 173 N ILE A 59 LINK NE2 HIS A 94 ZN ZN A1001 1555 1555 1.98 LINK NE2 HIS A 96 ZN ZN A1001 1555 1555 2.01 LINK ND1 HIS A 119 ZN ZN A1001 1555 1555 2.02 LINK O VAL A 134 HG BMBO A1205 1555 1555 3.04 LINK O GLN A 136 HG BMBO A1205 1555 1555 3.15 LINK O GLN A 136 HG AMBO A1205 1555 1555 2.92 LINK O GLU A 204 HG AMBO A1205 1555 1555 2.99 LINK SG ACYS A 205 HG AMBO A1205 1555 1555 2.31 LINK SG BCYS A 205 HG BMBO A1205 1555 1555 2.28 LINK ZN ZN A1001 N1 SUA A1002 1555 1555 1.94 LINK S2 ASUA A1002 HG HG A1005 1555 1555 2.70 LINK N2 SUA A1002 HG HG A1005 1555 1555 3.47 LINK HG AMBO A1205 O AHOH A1905 1555 1555 2.97 CISPEP 1 HIS A 3 HIS A 4 0 17.66 CISPEP 2 SER A 29 PRO A 30 0 -3.99 CISPEP 3 PRO A 200 PRO A 201 0 11.74 SITE 1 AC1 5 HIS A 94 HIS A 96 HIS A 119 SUA A1002 SITE 2 AC1 5 GOL A1003 SITE 1 AC2 2 PHE A 130 SUA A1002 SITE 1 AC3 8 VAL A 134 GLN A 135 GLN A 136 PRO A 137 SITE 2 AC3 8 GLU A 204 CYS A 205 HOH A1905 HOH A2166 SITE 1 AC4 12 GLN A 92 HIS A 94 HIS A 96 HIS A 119 SITE 2 AC4 12 PHE A 130 LEU A 197 THR A 198 THR A 199 SITE 3 AC4 12 TRP A 208 ZN A1001 GOL A1003 HG A1005 SITE 1 AC5 12 ASN A 62 HIS A 64 ALA A 65 ASN A 67 SITE 2 AC5 12 GLN A 92 HIS A 94 THR A 199 ZN A1001 SITE 3 AC5 12 SUA A1002 HOH A2172 HOH A2214 HOH A2261 SITE 1 AC6 11 PRO A 13 GLU A 14 HIS A 17 LYS A 24 SITE 2 AC6 11 GLN A 248 HOH A2003 HOH A2027 HOH A2064 SITE 3 AC6 11 HOH A2108 HOH A2255 HOH A2314 CRYST1 42.064 41.311 71.868 90.00 104.23 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023773 0.000000 0.006029 0.00000 SCALE2 0.000000 0.024207 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014355 0.00000