data_1LVB # _entry.id 1LVB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.351 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1LVB pdb_00001lvb 10.2210/pdb1lvb/pdb RCSB RCSB016310 ? ? WWPDB D_1000016310 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1LVM _pdbx_database_related.details 'Catalytically Active Tobacco Etch Virus Protease Complexed with Product' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1LVB _pdbx_database_status.recvd_initial_deposition_date 2002-05-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Phan, J.' 1 'Zdanov, A.' 2 'Evdokimov, A.G.' 3 'Tropea, J.E.' 4 'Peters III, H.K.' 5 'Kapust, R.B.' 6 'Li, M.' 7 'Wlodawer, A.' 8 'Waugh, D.S.' 9 # _citation.id primary _citation.title 'Structural basis for the substrate specificity of tobacco etch virus protease.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 277 _citation.page_first 50564 _citation.page_last 50572 _citation.year 2002 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12377789 _citation.pdbx_database_id_DOI 10.1074/jbc.M207224200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Phan, J.' 1 ? primary 'Zdanov, A.' 2 ? primary 'Evdokimov, A.G.' 3 ? primary 'Tropea, J.E.' 4 ? primary 'Peters III, H.K.' 5 ? primary 'Kapust, R.B.' 6 ? primary 'Li, M.' 7 ? primary 'Wlodawer, A.' 8 ? primary 'Waugh, D.S.' 9 ? # _cell.entry_id 1LVB _cell.length_a 125.317 _cell.length_b 125.317 _cell.length_c 127.933 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LVB _symmetry.space_group_name_H-M 'P 42 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CATALYTIC DOMAIN OF THE NUCLEAR INCLUSION PROTEIN A (NIA)' 28004.715 2 ? C151A ? ? 2 polymer man 'OLIGOPEPTIDE SUBSTRATE FOR THE PROTEASE' 1159.203 2 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 4 water nat water 18.015 181 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;SHHHHHHGESLFKGPRDYNPISSTICHLTNESDGHTTSLYGIGFGPFIITNKHLFRRNNGTLLVQSLHGVFKVKNTTTLQ QHLIDGRD(MSE)IIIR(MSE)PKDFPPFPQKLKFREPQREERICLVTTNFQTKS(MSE)SS(MSE)VSDTSCTFPSSDG IFWKHWIQTKDGQAGSPLVSTRDGFIVGIHSASNFTNTNNYFTSVPKNF(MSE)ELLTNQEAQQWVSGWRLNADSVLWGG HKVF(MSE)SKPEEPFQPVKEATQLMN ; ;SHHHHHHGESLFKGPRDYNPISSTICHLTNESDGHTTSLYGIGFGPFIITNKHLFRRNNGTLLVQSLHGVFKVKNTTTLQ QHLIDGRDMIIIRMPKDFPPFPQKLKFREPQREERICLVTTNFQTKSMSSMVSDTSCTFPSSDGIFWKHWIQTKDGQAGS PLVSTRDGFIVGIHSASNFTNTNNYFTSVPKNFMELLTNQEAQQWVSGWRLNADSVLWGGHKVFMSKPEEPFQPVKEATQ LMN ; A,B ? 2 'polypeptide(L)' no no TENLYFQSGT TENLYFQSGT C,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 GLY n 1 9 GLU n 1 10 SER n 1 11 LEU n 1 12 PHE n 1 13 LYS n 1 14 GLY n 1 15 PRO n 1 16 ARG n 1 17 ASP n 1 18 TYR n 1 19 ASN n 1 20 PRO n 1 21 ILE n 1 22 SER n 1 23 SER n 1 24 THR n 1 25 ILE n 1 26 CYS n 1 27 HIS n 1 28 LEU n 1 29 THR n 1 30 ASN n 1 31 GLU n 1 32 SER n 1 33 ASP n 1 34 GLY n 1 35 HIS n 1 36 THR n 1 37 THR n 1 38 SER n 1 39 LEU n 1 40 TYR n 1 41 GLY n 1 42 ILE n 1 43 GLY n 1 44 PHE n 1 45 GLY n 1 46 PRO n 1 47 PHE n 1 48 ILE n 1 49 ILE n 1 50 THR n 1 51 ASN n 1 52 LYS n 1 53 HIS n 1 54 LEU n 1 55 PHE n 1 56 ARG n 1 57 ARG n 1 58 ASN n 1 59 ASN n 1 60 GLY n 1 61 THR n 1 62 LEU n 1 63 LEU n 1 64 VAL n 1 65 GLN n 1 66 SER n 1 67 LEU n 1 68 HIS n 1 69 GLY n 1 70 VAL n 1 71 PHE n 1 72 LYS n 1 73 VAL n 1 74 LYS n 1 75 ASN n 1 76 THR n 1 77 THR n 1 78 THR n 1 79 LEU n 1 80 GLN n 1 81 GLN n 1 82 HIS n 1 83 LEU n 1 84 ILE n 1 85 ASP n 1 86 GLY n 1 87 ARG n 1 88 ASP n 1 89 MSE n 1 90 ILE n 1 91 ILE n 1 92 ILE n 1 93 ARG n 1 94 MSE n 1 95 PRO n 1 96 LYS n 1 97 ASP n 1 98 PHE n 1 99 PRO n 1 100 PRO n 1 101 PHE n 1 102 PRO n 1 103 GLN n 1 104 LYS n 1 105 LEU n 1 106 LYS n 1 107 PHE n 1 108 ARG n 1 109 GLU n 1 110 PRO n 1 111 GLN n 1 112 ARG n 1 113 GLU n 1 114 GLU n 1 115 ARG n 1 116 ILE n 1 117 CYS n 1 118 LEU n 1 119 VAL n 1 120 THR n 1 121 THR n 1 122 ASN n 1 123 PHE n 1 124 GLN n 1 125 THR n 1 126 LYS n 1 127 SER n 1 128 MSE n 1 129 SER n 1 130 SER n 1 131 MSE n 1 132 VAL n 1 133 SER n 1 134 ASP n 1 135 THR n 1 136 SER n 1 137 CYS n 1 138 THR n 1 139 PHE n 1 140 PRO n 1 141 SER n 1 142 SER n 1 143 ASP n 1 144 GLY n 1 145 ILE n 1 146 PHE n 1 147 TRP n 1 148 LYS n 1 149 HIS n 1 150 TRP n 1 151 ILE n 1 152 GLN n 1 153 THR n 1 154 LYS n 1 155 ASP n 1 156 GLY n 1 157 GLN n 1 158 ALA n 1 159 GLY n 1 160 SER n 1 161 PRO n 1 162 LEU n 1 163 VAL n 1 164 SER n 1 165 THR n 1 166 ARG n 1 167 ASP n 1 168 GLY n 1 169 PHE n 1 170 ILE n 1 171 VAL n 1 172 GLY n 1 173 ILE n 1 174 HIS n 1 175 SER n 1 176 ALA n 1 177 SER n 1 178 ASN n 1 179 PHE n 1 180 THR n 1 181 ASN n 1 182 THR n 1 183 ASN n 1 184 ASN n 1 185 TYR n 1 186 PHE n 1 187 THR n 1 188 SER n 1 189 VAL n 1 190 PRO n 1 191 LYS n 1 192 ASN n 1 193 PHE n 1 194 MSE n 1 195 GLU n 1 196 LEU n 1 197 LEU n 1 198 THR n 1 199 ASN n 1 200 GLN n 1 201 GLU n 1 202 ALA n 1 203 GLN n 1 204 GLN n 1 205 TRP n 1 206 VAL n 1 207 SER n 1 208 GLY n 1 209 TRP n 1 210 ARG n 1 211 LEU n 1 212 ASN n 1 213 ALA n 1 214 ASP n 1 215 SER n 1 216 VAL n 1 217 LEU n 1 218 TRP n 1 219 GLY n 1 220 GLY n 1 221 HIS n 1 222 LYS n 1 223 VAL n 1 224 PHE n 1 225 MSE n 1 226 SER n 1 227 LYS n 1 228 PRO n 1 229 GLU n 1 230 GLU n 1 231 PRO n 1 232 PHE n 1 233 GLN n 1 234 PRO n 1 235 VAL n 1 236 LYS n 1 237 GLU n 1 238 ALA n 1 239 THR n 1 240 GLN n 1 241 LEU n 1 242 MET n 1 243 ASN n 2 1 THR n 2 2 GLU n 2 3 ASN n 2 4 LEU n 2 5 TYR n 2 6 PHE n 2 7 GLN n 2 8 SER n 2 9 GLY n 2 10 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Potyvirus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Tobacco etch virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 12227 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pRK529 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code 1 UNP POLG_TEV P04517 1 2038 ? ? 2 UNP POLG_TEV P04517 2 2785 ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1LVB A 8 ? 243 ? P04517 2038 ? 2273 ? 1 236 2 2 1LVB C 1 ? 10 ? P04517 2785 ? 2794 ? 301 310 3 1 1LVB B 8 ? 243 ? P04517 2038 ? 2273 ? 1 236 4 2 1LVB D 1 ? 10 ? P04517 2785 ? 2794 ? 301 310 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1LVB SER A 1 ? UNP P04517 ? ? 'expression tag' -7 1 1 1LVB HIS A 2 ? UNP P04517 ? ? 'expression tag' -6 2 1 1LVB HIS A 3 ? UNP P04517 ? ? 'expression tag' -5 3 1 1LVB HIS A 4 ? UNP P04517 ? ? 'expression tag' -4 4 1 1LVB HIS A 5 ? UNP P04517 ? ? 'expression tag' -3 5 1 1LVB HIS A 6 ? UNP P04517 ? ? 'expression tag' -2 6 1 1LVB HIS A 7 ? UNP P04517 ? ? 'expression tag' -1 7 1 1LVB MSE A 89 ? UNP P04517 MET 2119 'modified residue' 82 8 1 1LVB MSE A 94 ? UNP P04517 MET 2124 'modified residue' 87 9 1 1LVB MSE A 128 ? UNP P04517 MET 2158 'modified residue' 121 10 1 1LVB MSE A 131 ? UNP P04517 MET 2161 'modified residue' 124 11 1 1LVB ALA A 158 ? UNP P04517 CYS 2188 'engineered mutation' 151 12 1 1LVB MSE A 194 ? UNP P04517 MET 2224 'modified residue' 187 13 1 1LVB MSE A 225 ? UNP P04517 MET 2255 'modified residue' 218 14 3 1LVB SER B 1 ? UNP P04517 ? ? 'expression tag' -7 15 3 1LVB HIS B 2 ? UNP P04517 ? ? 'expression tag' -6 16 3 1LVB HIS B 3 ? UNP P04517 ? ? 'expression tag' -5 17 3 1LVB HIS B 4 ? UNP P04517 ? ? 'expression tag' -4 18 3 1LVB HIS B 5 ? UNP P04517 ? ? 'expression tag' -3 19 3 1LVB HIS B 6 ? UNP P04517 ? ? 'expression tag' -2 20 3 1LVB HIS B 7 ? UNP P04517 ? ? 'expression tag' -1 21 3 1LVB MSE B 89 ? UNP P04517 MET 2119 'modified residue' 82 22 3 1LVB MSE B 94 ? UNP P04517 MET 2124 'modified residue' 87 23 3 1LVB MSE B 128 ? UNP P04517 MET 2158 'modified residue' 121 24 3 1LVB MSE B 131 ? UNP P04517 MET 2161 'modified residue' 124 25 3 1LVB ALA B 158 ? UNP P04517 CYS 2188 'engineered mutation' 151 26 3 1LVB MSE B 194 ? UNP P04517 MET 2224 'modified residue' 187 27 3 1LVB MSE B 225 ? UNP P04517 MET 2255 'modified residue' 218 28 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1LVB _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 71.42 _exptl_crystal.density_Matthews 4.30 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8 _exptl_crystal_grow.pdbx_details 'PEG 6000, Tris, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 112 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2001-12-19 _diffrn_detector.details Mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9755 1.0 2 0.9794 1.0 3 0.9796 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9755,0.9794,0.9796 # _reflns.entry_id 1LVB _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 2.20 _reflns.number_obs 38759 _reflns.number_all 51139 _reflns.percent_possible_obs 93.0 _reflns.pdbx_Rmerge_I_obs 0.08 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 25.0 _reflns.pdbx_redundancy 7.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 90.3 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1LVB _refine.ls_number_reflns_obs 38759 _refine.ls_number_reflns_all 38759 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 272840.06 _refine.pdbx_data_cutoff_low_absF 0.0000000 _refine.ls_d_res_low 33.69 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 92.5 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.236 _refine.ls_R_factor_R_free 0.263 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 2411 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 45.3 _refine.aniso_B[1][1] -7.47 _refine.aniso_B[2][2] -7.47 _refine.aniso_B[3][3] 14.93 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.360486 _refine.solvent_model_param_bsol 65.6121 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF 272840.06 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1LVB _refine_analyze.Luzzati_coordinate_error_obs 0.39 _refine_analyze.Luzzati_sigma_a_obs 0.43 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.42 _refine_analyze.Luzzati_sigma_a_free 0.47 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3590 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 181 _refine_hist.number_atoms_total 3783 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 33.69 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.015 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 25.9 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.80 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 2.05 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.58 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.18 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.15 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_restr_ncs.dom_id 1 _refine_ls_restr_ncs.ncs_model_details CONSTR _refine_ls_restr_ncs.rms_dev_position ? _refine_ls_restr_ncs.weight_position ? _refine_ls_restr_ncs.rms_dev_B_iso ? _refine_ls_restr_ncs.weight_B_iso ? _refine_ls_restr_ncs.pdbx_type . _refine_ls_restr_ncs.pdbx_auth_asym_id . _refine_ls_restr_ncs.pdbx_ens_id 1 _refine_ls_restr_ncs.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_restr_ncs.pdbx_ordinal 1 _refine_ls_restr_ncs.pdbx_number ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.34 _refine_ls_shell.number_reflns_R_work 6703 _refine_ls_shell.R_factor_R_work 0.394 _refine_ls_shell.percent_reflns_obs 83.0 _refine_ls_shell.R_factor_R_free 0.435 _refine_ls_shell.R_factor_R_free_error 0.022 _refine_ls_shell.percent_reflns_R_free 5.6 _refine_ls_shell.number_reflns_R_free 400 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM ? 'X-RAY DIFFRACTION' 3 TOPP ? 'X-RAY DIFFRACTION' # _struct_ncs_dom.id 1 _struct_ncs_dom.details ? _struct_ncs_dom.pdbx_ens_id 1 # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? _struct_ncs_ens.point_group ? # _struct.entry_id 1LVB _struct.title 'CATALYTICALLY INACTIVE TOBACCO ETCH VIRUS PROTEASE COMPLEXED WITH SUBSTRATE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1LVB _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text 'Beta Barrel, Protein-Peptide Complex, Chymotrypsin-like Cystein Protease, Viral protein' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? # loop_ _struct_biol.id _struct_biol.pdbx_parent_biol_id _struct_biol.details 1 ? ? 2 ? ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 18 ? SER A 23 ? TYR A 11 SER A 16 1 ? 6 HELX_P HELX_P2 2 ASN A 51 ? ARG A 56 ? ASN A 44 ARG A 49 5 ? 6 HELX_P HELX_P3 3 ASN A 75 ? LEU A 79 ? ASN A 68 LEU A 72 5 ? 5 HELX_P HELX_P4 4 ASN A 192 ? ASN A 199 ? ASN A 185 ASN A 192 1 ? 8 HELX_P HELX_P5 5 GLN A 200 ? GLN A 203 ? GLN A 193 GLN A 196 5 ? 4 HELX_P HELX_P6 6 TYR C 18 ? SER C 23 ? TYR B 11 SER B 16 1 ? 6 HELX_P HELX_P7 7 ASN C 51 ? ARG C 56 ? ASN B 44 ARG B 49 5 ? 6 HELX_P HELX_P8 8 ASN C 75 ? LEU C 79 ? ASN B 68 LEU B 72 5 ? 5 HELX_P HELX_P9 9 ASN C 192 ? ASN C 199 ? ASN B 185 ASN B 192 1 ? 8 HELX_P HELX_P10 10 GLN C 200 ? GLN C 203 ? GLN B 193 GLN B 196 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 137 SG ? ? ? 1_555 A CYS 137 SG ? ? A CYS 130 A CYS 130 2_665 ? ? ? ? ? ? ? 2.061 ? ? covale1 covale both ? A ASP 88 C ? ? ? 1_555 A MSE 89 N ? ? A ASP 81 A MSE 82 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale2 covale both ? A MSE 89 C ? ? ? 1_555 A ILE 90 N ? ? A MSE 82 A ILE 83 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale3 covale both ? A ARG 93 C ? ? ? 1_555 A MSE 94 N ? ? A ARG 86 A MSE 87 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale4 covale both ? A MSE 94 C ? ? ? 1_555 A PRO 95 N ? ? A MSE 87 A PRO 88 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale5 covale both ? A SER 127 C ? ? ? 1_555 A MSE 128 N ? ? A SER 120 A MSE 121 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale6 covale both ? A MSE 128 C ? ? ? 1_555 A SER 129 N ? ? A MSE 121 A SER 122 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale7 covale both ? A SER 130 C ? ? ? 1_555 A MSE 131 N ? ? A SER 123 A MSE 124 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale8 covale both ? A MSE 131 C ? ? ? 1_555 A VAL 132 N ? ? A MSE 124 A VAL 125 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale9 covale both ? A PHE 193 C ? ? ? 1_555 A MSE 194 N ? ? A PHE 186 A MSE 187 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale10 covale both ? A MSE 194 C ? ? ? 1_555 A GLU 195 N ? ? A MSE 187 A GLU 188 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale11 covale both ? A PHE 224 C ? ? ? 1_555 A MSE 225 N ? ? A PHE 217 A MSE 218 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale12 covale both ? A MSE 225 C ? ? ? 1_555 A SER 226 N ? ? A MSE 218 A SER 219 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale13 covale both ? C ASP 88 C ? ? ? 1_555 C MSE 89 N ? ? B ASP 81 B MSE 82 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale14 covale both ? C MSE 89 C ? ? ? 1_555 C ILE 90 N ? ? B MSE 82 B ILE 83 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale15 covale both ? C ARG 93 C ? ? ? 1_555 C MSE 94 N ? ? B ARG 86 B MSE 87 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale16 covale both ? C MSE 94 C ? ? ? 1_555 C PRO 95 N ? ? B MSE 87 B PRO 88 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale17 covale both ? C SER 127 C ? ? ? 1_555 C MSE 128 N ? ? B SER 120 B MSE 121 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale18 covale both ? C MSE 128 C ? ? ? 1_555 C SER 129 N ? ? B MSE 121 B SER 122 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale19 covale both ? C SER 130 C ? ? ? 1_555 C MSE 131 N ? ? B SER 123 B MSE 124 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale20 covale both ? C MSE 131 C ? ? ? 1_555 C VAL 132 N ? ? B MSE 124 B VAL 125 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale21 covale both ? C PHE 193 C ? ? ? 1_555 C MSE 194 N ? ? B PHE 186 B MSE 187 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale22 covale both ? C MSE 194 C ? ? ? 1_555 C GLU 195 N ? ? B MSE 187 B GLU 188 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale23 covale both ? C PHE 224 C ? ? ? 1_555 C MSE 225 N ? ? B PHE 217 B MSE 218 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale24 covale both ? C MSE 225 C ? ? ? 1_555 C SER 226 N ? ? B MSE 218 B SER 219 1_555 ? ? ? ? ? ? ? 1.327 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 24 ? C ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel B 8 9 ? parallel B 9 10 ? anti-parallel B 10 11 ? anti-parallel B 11 12 ? anti-parallel B 12 13 ? anti-parallel B 13 14 ? anti-parallel B 14 15 ? anti-parallel B 15 16 ? anti-parallel B 16 17 ? anti-parallel B 17 18 ? anti-parallel B 18 19 ? anti-parallel B 19 20 ? anti-parallel B 20 21 ? anti-parallel B 21 22 ? anti-parallel B 22 23 ? parallel B 23 24 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel C 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 69 ? VAL A 73 ? GLY A 62 VAL A 66 A 2 GLY A 60 ? SER A 66 ? GLY A 53 SER A 59 A 3 ILE A 25 ? SER A 32 ? ILE A 18 SER A 25 A 4 HIS A 35 ? PHE A 44 ? HIS A 28 PHE A 37 A 5 PHE A 47 ? THR A 50 ? PHE A 40 THR A 43 A 6 ILE A 90 ? ARG A 93 ? ILE A 83 ARG A 86 A 7 GLN A 80 ? LEU A 83 ? GLN A 73 LEU A 76 B 1 PHE A 139 ? SER A 141 ? PHE A 132 SER A 134 B 2 PHE A 146 ? HIS A 149 ? PHE A 139 HIS A 142 B 3 ASN A 184 ? SER A 188 ? ASN A 177 SER A 181 B 4 ILE A 170 ? ASN A 178 ? ILE A 163 ASN A 171 B 5 LEU B 4 ? PHE B 6 ? LEU C 304 PHE C 306 B 6 HIS A 221 ? PHE A 224 ? HIS A 214 PHE A 217 B 7 SER A 215 ? TRP A 218 ? SER A 208 TRP A 211 B 8 HIS A 221 ? PHE A 224 ? HIS A 214 PHE A 217 B 9 LEU B 4 ? PHE B 6 ? LEU C 304 PHE C 306 B 10 ILE A 170 ? ASN A 178 ? ILE A 163 ASN A 171 B 11 PRO A 161 ? SER A 164 ? PRO A 154 SER A 157 B 12 ILE A 116 ? PHE A 123 ? ILE A 109 PHE A 116 B 13 SER A 127 ? VAL A 132 ? SER A 120 VAL A 125 B 14 SER C 127 ? VAL C 132 ? SER B 120 VAL B 125 B 15 ARG C 115 ? PHE C 123 ? ARG B 108 PHE B 116 B 16 SER C 136 ? PRO C 140 ? SER B 129 PRO B 133 B 17 PHE C 146 ? HIS C 149 ? PHE B 139 HIS B 142 B 18 ASN C 184 ? SER C 188 ? ASN B 177 SER B 181 B 19 ILE C 170 ? ASN C 178 ? ILE B 163 ASN B 171 B 20 PRO C 161 ? SER C 164 ? PRO B 154 SER B 157 B 21 ILE C 170 ? ASN C 178 ? ILE B 163 ASN B 171 B 22 LEU D 4 ? PHE D 6 ? LEU D 304 PHE D 306 B 23 HIS C 221 ? PHE C 224 ? HIS B 214 PHE B 217 B 24 SER C 215 ? TRP C 218 ? SER B 208 TRP B 211 C 1 GLY C 69 ? VAL C 73 ? GLY B 62 VAL B 66 C 2 GLY C 60 ? SER C 66 ? GLY B 53 SER B 59 C 3 ILE C 25 ? SER C 32 ? ILE B 18 SER B 25 C 4 HIS C 35 ? PHE C 44 ? HIS B 28 PHE B 37 C 5 PHE C 47 ? THR C 50 ? PHE B 40 THR B 43 C 6 ILE C 90 ? ARG C 93 ? ILE B 83 ARG B 86 C 7 GLN C 80 ? LEU C 83 ? GLN B 73 LEU B 76 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 73 ? N VAL A 66 O LEU A 62 ? O LEU A 55 A 2 3 O GLN A 65 ? O GLN A 58 N HIS A 27 ? N HIS A 20 A 3 4 N SER A 32 ? N SER A 25 O HIS A 35 ? O HIS A 28 A 4 5 N PHE A 44 ? N PHE A 37 O PHE A 47 ? O PHE A 40 A 5 6 O THR A 50 ? O THR A 43 N ILE A 90 ? N ILE A 83 A 6 7 N ARG A 93 ? N ARG A 86 O GLN A 80 ? O GLN A 73 B 1 2 N SER A 141 ? N SER A 134 O PHE A 146 ? O PHE A 139 B 2 3 N HIS A 149 ? N HIS A 142 O ASN A 184 ? O ASN A 177 B 3 4 N THR A 187 ? N THR A 180 O ILE A 173 ? O ILE A 166 B 4 5 O SER A 177 ? O SER A 170 N TYR B 5 ? N TYR C 305 B 5 6 N LEU B 4 ? N LEU C 304 O LYS A 222 ? O LYS A 215 B 6 7 N VAL A 223 ? N VAL A 216 O VAL A 216 ? O VAL A 209 B 7 8 O TRP A 218 ? O TRP A 211 N HIS A 221 ? N HIS A 214 B 8 9 N PHE A 224 ? N PHE A 217 O LEU B 4 ? O LEU C 304 B 9 10 N TYR B 5 ? N TYR C 305 O SER A 177 ? O SER A 170 B 10 11 O GLY A 172 ? O GLY A 165 N LEU A 162 ? N LEU A 155 B 11 12 N VAL A 163 ? N VAL A 156 O CYS A 117 ? O CYS A 110 B 12 13 N ASN A 122 ? N ASN A 115 O SER A 129 ? O SER A 122 B 13 14 N SER A 130 ? N SER A 123 O MSE C 128 ? O MSE B 121 B 14 15 O MSE C 131 ? O MSE B 124 N THR C 120 ? N THR B 113 B 15 16 N ILE C 116 ? N ILE B 109 O SER C 136 ? O SER B 129 B 16 17 O PHE C 139 ? O PHE B 132 N LYS C 148 ? N LYS B 141 B 17 18 N HIS C 149 ? N HIS B 142 O ASN C 184 ? O ASN B 177 B 18 19 N THR C 187 ? N THR B 180 O ILE C 173 ? O ILE B 166 B 19 20 N VAL C 171 ? N VAL B 164 O LEU C 162 ? O LEU B 155 B 20 21 O LEU C 162 ? O LEU B 155 N VAL C 171 ? N VAL B 164 B 21 22 O SER C 177 ? O SER B 170 N TYR D 5 ? N TYR D 305 B 22 23 N LEU D 4 ? N LEU D 304 O LYS C 222 ? O LYS B 215 B 23 24 N VAL C 223 ? N VAL B 216 O VAL C 216 ? O VAL B 209 C 1 2 N VAL C 73 ? N VAL B 66 O LEU C 62 ? O LEU B 55 C 2 3 O GLN C 65 ? O GLN B 58 N HIS C 27 ? N HIS B 20 C 3 4 N SER C 32 ? N SER B 25 O HIS C 35 ? O HIS B 28 C 4 5 N PHE C 44 ? N PHE B 37 O PHE C 47 ? O PHE B 40 C 5 6 O THR C 50 ? O THR B 43 N ILE C 90 ? N ILE B 83 C 6 7 N ARG C 93 ? N ARG B 86 O GLN C 80 ? O GLN B 73 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GOL 401 ? 8 'BINDING SITE FOR RESIDUE GOL A 401' AC2 Software B GOL 402 ? 9 'BINDING SITE FOR RESIDUE GOL B 402' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 ARG A 16 ? ARG A 9 . ? 1_555 ? 2 AC1 8 ASP A 17 ? ASP A 10 . ? 1_555 ? 3 AC1 8 TYR A 18 ? TYR A 11 . ? 1_555 ? 4 AC1 8 ASN A 19 ? ASN A 12 . ? 1_555 ? 5 AC1 8 SER A 22 ? SER A 15 . ? 1_555 ? 6 AC1 8 SER C 127 ? SER B 120 . ? 1_555 ? 7 AC1 8 MSE C 128 ? MSE B 121 . ? 1_555 ? 8 AC1 8 HOH I . ? HOH B 460 . ? 1_555 ? 9 AC2 9 SER A 127 ? SER A 120 . ? 1_555 ? 10 AC2 9 MSE A 128 ? MSE A 121 . ? 1_555 ? 11 AC2 9 ARG C 16 ? ARG B 9 . ? 1_555 ? 12 AC2 9 ASP C 17 ? ASP B 10 . ? 1_555 ? 13 AC2 9 TYR C 18 ? TYR B 11 . ? 1_555 ? 14 AC2 9 ASN C 19 ? ASN B 12 . ? 1_555 ? 15 AC2 9 SER C 22 ? SER B 15 . ? 1_555 ? 16 AC2 9 SER C 130 ? SER B 123 . ? 1_555 ? 17 AC2 9 HOH I . ? HOH B 408 . ? 1_555 ? # _database_PDB_matrix.entry_id 1LVB _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1LVB _atom_sites.fract_transf_matrix[1][1] 0.007980 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007980 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007817 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -7 ? ? ? A . n A 1 2 HIS 2 -6 ? ? ? A . n A 1 3 HIS 3 -5 ? ? ? A . n A 1 4 HIS 4 -4 ? ? ? A . n A 1 5 HIS 5 -3 ? ? ? A . n A 1 6 HIS 6 -2 ? ? ? A . n A 1 7 HIS 7 -1 ? ? ? A . n A 1 8 GLY 8 1 ? ? ? A . n A 1 9 GLU 9 2 ? ? ? A . n A 1 10 SER 10 3 ? ? ? A . n A 1 11 LEU 11 4 ? ? ? A . n A 1 12 PHE 12 5 ? ? ? A . n A 1 13 LYS 13 6 ? ? ? A . n A 1 14 GLY 14 7 ? ? ? A . n A 1 15 PRO 15 8 8 PRO PRO A . n A 1 16 ARG 16 9 9 ARG ARG A . n A 1 17 ASP 17 10 10 ASP ASP A . n A 1 18 TYR 18 11 11 TYR TYR A . n A 1 19 ASN 19 12 12 ASN ASN A . n A 1 20 PRO 20 13 13 PRO PRO A . n A 1 21 ILE 21 14 14 ILE ILE A . n A 1 22 SER 22 15 15 SER SER A . n A 1 23 SER 23 16 16 SER SER A . n A 1 24 THR 24 17 17 THR THR A . n A 1 25 ILE 25 18 18 ILE ILE A . n A 1 26 CYS 26 19 19 CYS CYS A . n A 1 27 HIS 27 20 20 HIS HIS A . n A 1 28 LEU 28 21 21 LEU LEU A . n A 1 29 THR 29 22 22 THR THR A . n A 1 30 ASN 30 23 23 ASN ASN A . n A 1 31 GLU 31 24 24 GLU GLU A . n A 1 32 SER 32 25 25 SER SER A . n A 1 33 ASP 33 26 26 ASP ASP A . n A 1 34 GLY 34 27 27 GLY GLY A . n A 1 35 HIS 35 28 28 HIS HIS A . n A 1 36 THR 36 29 29 THR THR A . n A 1 37 THR 37 30 30 THR THR A . n A 1 38 SER 38 31 31 SER SER A . n A 1 39 LEU 39 32 32 LEU LEU A . n A 1 40 TYR 40 33 33 TYR TYR A . n A 1 41 GLY 41 34 34 GLY GLY A . n A 1 42 ILE 42 35 35 ILE ILE A . n A 1 43 GLY 43 36 36 GLY GLY A . n A 1 44 PHE 44 37 37 PHE PHE A . n A 1 45 GLY 45 38 38 GLY GLY A . n A 1 46 PRO 46 39 39 PRO PRO A . n A 1 47 PHE 47 40 40 PHE PHE A . n A 1 48 ILE 48 41 41 ILE ILE A . n A 1 49 ILE 49 42 42 ILE ILE A . n A 1 50 THR 50 43 43 THR THR A . n A 1 51 ASN 51 44 44 ASN ASN A . n A 1 52 LYS 52 45 45 LYS LYS A . n A 1 53 HIS 53 46 46 HIS HIS A . n A 1 54 LEU 54 47 47 LEU LEU A . n A 1 55 PHE 55 48 48 PHE PHE A . n A 1 56 ARG 56 49 49 ARG ARG A . n A 1 57 ARG 57 50 50 ARG ARG A . n A 1 58 ASN 58 51 51 ASN ASN A . n A 1 59 ASN 59 52 52 ASN ASN A . n A 1 60 GLY 60 53 53 GLY GLY A . n A 1 61 THR 61 54 54 THR THR A . n A 1 62 LEU 62 55 55 LEU LEU A . n A 1 63 LEU 63 56 56 LEU LEU A . n A 1 64 VAL 64 57 57 VAL VAL A . n A 1 65 GLN 65 58 58 GLN GLN A . n A 1 66 SER 66 59 59 SER SER A . n A 1 67 LEU 67 60 60 LEU LEU A . n A 1 68 HIS 68 61 61 HIS HIS A . n A 1 69 GLY 69 62 62 GLY GLY A . n A 1 70 VAL 70 63 63 VAL VAL A . n A 1 71 PHE 71 64 64 PHE PHE A . n A 1 72 LYS 72 65 65 LYS LYS A . n A 1 73 VAL 73 66 66 VAL VAL A . n A 1 74 LYS 74 67 67 LYS LYS A . n A 1 75 ASN 75 68 68 ASN ASN A . n A 1 76 THR 76 69 69 THR THR A . n A 1 77 THR 77 70 70 THR THR A . n A 1 78 THR 78 71 71 THR THR A . n A 1 79 LEU 79 72 72 LEU LEU A . n A 1 80 GLN 80 73 73 GLN GLN A . n A 1 81 GLN 81 74 74 GLN GLN A . n A 1 82 HIS 82 75 75 HIS HIS A . n A 1 83 LEU 83 76 76 LEU LEU A . n A 1 84 ILE 84 77 77 ILE ILE A . n A 1 85 ASP 85 78 78 ASP ASP A . n A 1 86 GLY 86 79 79 GLY GLY A . n A 1 87 ARG 87 80 80 ARG ARG A . n A 1 88 ASP 88 81 81 ASP ASP A . n A 1 89 MSE 89 82 82 MSE MSE A . n A 1 90 ILE 90 83 83 ILE ILE A . n A 1 91 ILE 91 84 84 ILE ILE A . n A 1 92 ILE 92 85 85 ILE ILE A . n A 1 93 ARG 93 86 86 ARG ARG A . n A 1 94 MSE 94 87 87 MSE MSE A . n A 1 95 PRO 95 88 88 PRO PRO A . n A 1 96 LYS 96 89 89 LYS LYS A . n A 1 97 ASP 97 90 90 ASP ASP A . n A 1 98 PHE 98 91 91 PHE PHE A . n A 1 99 PRO 99 92 92 PRO PRO A . n A 1 100 PRO 100 93 93 PRO PRO A . n A 1 101 PHE 101 94 94 PHE PHE A . n A 1 102 PRO 102 95 95 PRO PRO A . n A 1 103 GLN 103 96 96 GLN GLN A . n A 1 104 LYS 104 97 97 LYS LYS A . n A 1 105 LEU 105 98 98 LEU LEU A . n A 1 106 LYS 106 99 99 LYS LYS A . n A 1 107 PHE 107 100 100 PHE PHE A . n A 1 108 ARG 108 101 101 ARG ARG A . n A 1 109 GLU 109 102 102 GLU GLU A . n A 1 110 PRO 110 103 103 PRO PRO A . n A 1 111 GLN 111 104 104 GLN GLN A . n A 1 112 ARG 112 105 105 ARG ARG A . n A 1 113 GLU 113 106 106 GLU GLU A . n A 1 114 GLU 114 107 107 GLU GLU A . n A 1 115 ARG 115 108 108 ARG ARG A . n A 1 116 ILE 116 109 109 ILE ILE A . n A 1 117 CYS 117 110 110 CYS CYS A . n A 1 118 LEU 118 111 111 LEU LEU A . n A 1 119 VAL 119 112 112 VAL VAL A . n A 1 120 THR 120 113 113 THR THR A . n A 1 121 THR 121 114 114 THR THR A . n A 1 122 ASN 122 115 115 ASN ASN A . n A 1 123 PHE 123 116 116 PHE PHE A . n A 1 124 GLN 124 117 117 GLN GLN A . n A 1 125 THR 125 118 118 THR THR A . n A 1 126 LYS 126 119 119 LYS LYS A . n A 1 127 SER 127 120 120 SER SER A . n A 1 128 MSE 128 121 121 MSE MSE A . n A 1 129 SER 129 122 122 SER SER A . n A 1 130 SER 130 123 123 SER SER A . n A 1 131 MSE 131 124 124 MSE MSE A . n A 1 132 VAL 132 125 125 VAL VAL A . n A 1 133 SER 133 126 126 SER SER A . n A 1 134 ASP 134 127 127 ASP ASP A . n A 1 135 THR 135 128 128 THR THR A . n A 1 136 SER 136 129 129 SER SER A . n A 1 137 CYS 137 130 130 CYS CYS A . n A 1 138 THR 138 131 131 THR THR A . n A 1 139 PHE 139 132 132 PHE PHE A . n A 1 140 PRO 140 133 133 PRO PRO A . n A 1 141 SER 141 134 134 SER SER A . n A 1 142 SER 142 135 135 SER SER A . n A 1 143 ASP 143 136 136 ASP ASP A . n A 1 144 GLY 144 137 137 GLY GLY A . n A 1 145 ILE 145 138 138 ILE ILE A . n A 1 146 PHE 146 139 139 PHE PHE A . n A 1 147 TRP 147 140 140 TRP TRP A . n A 1 148 LYS 148 141 141 LYS LYS A . n A 1 149 HIS 149 142 142 HIS HIS A . n A 1 150 TRP 150 143 143 TRP TRP A . n A 1 151 ILE 151 144 144 ILE ILE A . n A 1 152 GLN 152 145 145 GLN GLN A . n A 1 153 THR 153 146 146 THR THR A . n A 1 154 LYS 154 147 147 LYS LYS A . n A 1 155 ASP 155 148 148 ASP ASP A . n A 1 156 GLY 156 149 149 GLY GLY A . n A 1 157 GLN 157 150 150 GLN GLN A . n A 1 158 ALA 158 151 151 ALA ALA A . n A 1 159 GLY 159 152 152 GLY GLY A . n A 1 160 SER 160 153 153 SER SER A . n A 1 161 PRO 161 154 154 PRO PRO A . n A 1 162 LEU 162 155 155 LEU LEU A . n A 1 163 VAL 163 156 156 VAL VAL A . n A 1 164 SER 164 157 157 SER SER A . n A 1 165 THR 165 158 158 THR THR A . n A 1 166 ARG 166 159 159 ARG ARG A . n A 1 167 ASP 167 160 160 ASP ASP A . n A 1 168 GLY 168 161 161 GLY GLY A . n A 1 169 PHE 169 162 162 PHE PHE A . n A 1 170 ILE 170 163 163 ILE ILE A . n A 1 171 VAL 171 164 164 VAL VAL A . n A 1 172 GLY 172 165 165 GLY GLY A . n A 1 173 ILE 173 166 166 ILE ILE A . n A 1 174 HIS 174 167 167 HIS HIS A . n A 1 175 SER 175 168 168 SER SER A . n A 1 176 ALA 176 169 169 ALA ALA A . n A 1 177 SER 177 170 170 SER SER A . n A 1 178 ASN 178 171 171 ASN ASN A . n A 1 179 PHE 179 172 172 PHE PHE A . n A 1 180 THR 180 173 173 THR THR A . n A 1 181 ASN 181 174 174 ASN ASN A . n A 1 182 THR 182 175 175 THR THR A . n A 1 183 ASN 183 176 176 ASN ASN A . n A 1 184 ASN 184 177 177 ASN ASN A . n A 1 185 TYR 185 178 178 TYR TYR A . n A 1 186 PHE 186 179 179 PHE PHE A . n A 1 187 THR 187 180 180 THR THR A . n A 1 188 SER 188 181 181 SER SER A . n A 1 189 VAL 189 182 182 VAL VAL A . n A 1 190 PRO 190 183 183 PRO PRO A . n A 1 191 LYS 191 184 184 LYS LYS A . n A 1 192 ASN 192 185 185 ASN ASN A . n A 1 193 PHE 193 186 186 PHE PHE A . n A 1 194 MSE 194 187 187 MSE MSE A . n A 1 195 GLU 195 188 188 GLU GLU A . n A 1 196 LEU 196 189 189 LEU LEU A . n A 1 197 LEU 197 190 190 LEU LEU A . n A 1 198 THR 198 191 191 THR THR A . n A 1 199 ASN 199 192 192 ASN ASN A . n A 1 200 GLN 200 193 193 GLN GLN A . n A 1 201 GLU 201 194 194 GLU GLU A . n A 1 202 ALA 202 195 195 ALA ALA A . n A 1 203 GLN 203 196 196 GLN GLN A . n A 1 204 GLN 204 197 197 GLN GLN A . n A 1 205 TRP 205 198 198 TRP TRP A . n A 1 206 VAL 206 199 199 VAL VAL A . n A 1 207 SER 207 200 200 SER SER A . n A 1 208 GLY 208 201 201 GLY GLY A . n A 1 209 TRP 209 202 202 TRP TRP A . n A 1 210 ARG 210 203 203 ARG ARG A . n A 1 211 LEU 211 204 204 LEU LEU A . n A 1 212 ASN 212 205 205 ASN ASN A . n A 1 213 ALA 213 206 206 ALA ALA A . n A 1 214 ASP 214 207 207 ASP ASP A . n A 1 215 SER 215 208 208 SER SER A . n A 1 216 VAL 216 209 209 VAL VAL A . n A 1 217 LEU 217 210 210 LEU LEU A . n A 1 218 TRP 218 211 211 TRP TRP A . n A 1 219 GLY 219 212 212 GLY GLY A . n A 1 220 GLY 220 213 213 GLY GLY A . n A 1 221 HIS 221 214 214 HIS HIS A . n A 1 222 LYS 222 215 215 LYS LYS A . n A 1 223 VAL 223 216 216 VAL VAL A . n A 1 224 PHE 224 217 217 PHE PHE A . n A 1 225 MSE 225 218 218 MSE MSE A . n A 1 226 SER 226 219 219 SER SER A . n A 1 227 LYS 227 220 220 LYS LYS A . n A 1 228 PRO 228 221 221 PRO PRO A . n A 1 229 GLU 229 222 ? ? ? A . n A 1 230 GLU 230 223 ? ? ? A . n A 1 231 PRO 231 224 ? ? ? A . n A 1 232 PHE 232 225 ? ? ? A . n A 1 233 GLN 233 226 ? ? ? A . n A 1 234 PRO 234 227 ? ? ? A . n A 1 235 VAL 235 228 ? ? ? A . n A 1 236 LYS 236 229 ? ? ? A . n A 1 237 GLU 237 230 ? ? ? A . n A 1 238 ALA 238 231 ? ? ? A . n A 1 239 THR 239 232 ? ? ? A . n A 1 240 GLN 240 233 ? ? ? A . n A 1 241 LEU 241 234 ? ? ? A . n A 1 242 MET 242 235 ? ? ? A . n A 1 243 ASN 243 236 ? ? ? A . n B 2 1 THR 1 301 301 THR THR C . n B 2 2 GLU 2 302 302 GLU GLU C . n B 2 3 ASN 3 303 303 ASN ASN C . n B 2 4 LEU 4 304 304 LEU LEU C . n B 2 5 TYR 5 305 305 TYR TYR C . n B 2 6 PHE 6 306 306 PHE PHE C . n B 2 7 GLN 7 307 307 GLN GLN C . n B 2 8 SER 8 308 308 SER SER C . n B 2 9 GLY 9 309 309 GLY GLY C . n B 2 10 THR 10 310 310 THR THR C . n C 1 1 SER 1 -7 ? ? ? B . n C 1 2 HIS 2 -6 ? ? ? B . n C 1 3 HIS 3 -5 ? ? ? B . n C 1 4 HIS 4 -4 ? ? ? B . n C 1 5 HIS 5 -3 ? ? ? B . n C 1 6 HIS 6 -2 ? ? ? B . n C 1 7 HIS 7 -1 ? ? ? B . n C 1 8 GLY 8 1 ? ? ? B . n C 1 9 GLU 9 2 ? ? ? B . n C 1 10 SER 10 3 ? ? ? B . n C 1 11 LEU 11 4 ? ? ? B . n C 1 12 PHE 12 5 ? ? ? B . n C 1 13 LYS 13 6 ? ? ? B . n C 1 14 GLY 14 7 ? ? ? B . n C 1 15 PRO 15 8 8 PRO PRO B . n C 1 16 ARG 16 9 9 ARG ARG B . n C 1 17 ASP 17 10 10 ASP ASP B . n C 1 18 TYR 18 11 11 TYR TYR B . n C 1 19 ASN 19 12 12 ASN ASN B . n C 1 20 PRO 20 13 13 PRO PRO B . n C 1 21 ILE 21 14 14 ILE ILE B . n C 1 22 SER 22 15 15 SER SER B . n C 1 23 SER 23 16 16 SER SER B . n C 1 24 THR 24 17 17 THR THR B . n C 1 25 ILE 25 18 18 ILE ILE B . n C 1 26 CYS 26 19 19 CYS CYS B . n C 1 27 HIS 27 20 20 HIS HIS B . n C 1 28 LEU 28 21 21 LEU LEU B . n C 1 29 THR 29 22 22 THR THR B . n C 1 30 ASN 30 23 23 ASN ASN B . n C 1 31 GLU 31 24 24 GLU GLU B . n C 1 32 SER 32 25 25 SER SER B . n C 1 33 ASP 33 26 26 ASP ASP B . n C 1 34 GLY 34 27 27 GLY GLY B . n C 1 35 HIS 35 28 28 HIS HIS B . n C 1 36 THR 36 29 29 THR THR B . n C 1 37 THR 37 30 30 THR THR B . n C 1 38 SER 38 31 31 SER SER B . n C 1 39 LEU 39 32 32 LEU LEU B . n C 1 40 TYR 40 33 33 TYR TYR B . n C 1 41 GLY 41 34 34 GLY GLY B . n C 1 42 ILE 42 35 35 ILE ILE B . n C 1 43 GLY 43 36 36 GLY GLY B . n C 1 44 PHE 44 37 37 PHE PHE B . n C 1 45 GLY 45 38 38 GLY GLY B . n C 1 46 PRO 46 39 39 PRO PRO B . n C 1 47 PHE 47 40 40 PHE PHE B . n C 1 48 ILE 48 41 41 ILE ILE B . n C 1 49 ILE 49 42 42 ILE ILE B . n C 1 50 THR 50 43 43 THR THR B . n C 1 51 ASN 51 44 44 ASN ASN B . n C 1 52 LYS 52 45 45 LYS LYS B . n C 1 53 HIS 53 46 46 HIS HIS B . n C 1 54 LEU 54 47 47 LEU LEU B . n C 1 55 PHE 55 48 48 PHE PHE B . n C 1 56 ARG 56 49 49 ARG ARG B . n C 1 57 ARG 57 50 50 ARG ARG B . n C 1 58 ASN 58 51 51 ASN ASN B . n C 1 59 ASN 59 52 52 ASN ASN B . n C 1 60 GLY 60 53 53 GLY GLY B . n C 1 61 THR 61 54 54 THR THR B . n C 1 62 LEU 62 55 55 LEU LEU B . n C 1 63 LEU 63 56 56 LEU LEU B . n C 1 64 VAL 64 57 57 VAL VAL B . n C 1 65 GLN 65 58 58 GLN GLN B . n C 1 66 SER 66 59 59 SER SER B . n C 1 67 LEU 67 60 60 LEU LEU B . n C 1 68 HIS 68 61 61 HIS HIS B . n C 1 69 GLY 69 62 62 GLY GLY B . n C 1 70 VAL 70 63 63 VAL VAL B . n C 1 71 PHE 71 64 64 PHE PHE B . n C 1 72 LYS 72 65 65 LYS LYS B . n C 1 73 VAL 73 66 66 VAL VAL B . n C 1 74 LYS 74 67 67 LYS LYS B . n C 1 75 ASN 75 68 68 ASN ASN B . n C 1 76 THR 76 69 69 THR THR B . n C 1 77 THR 77 70 70 THR THR B . n C 1 78 THR 78 71 71 THR THR B . n C 1 79 LEU 79 72 72 LEU LEU B . n C 1 80 GLN 80 73 73 GLN GLN B . n C 1 81 GLN 81 74 74 GLN GLN B . n C 1 82 HIS 82 75 75 HIS HIS B . n C 1 83 LEU 83 76 76 LEU LEU B . n C 1 84 ILE 84 77 77 ILE ILE B . n C 1 85 ASP 85 78 78 ASP ASP B . n C 1 86 GLY 86 79 79 GLY GLY B . n C 1 87 ARG 87 80 80 ARG ARG B . n C 1 88 ASP 88 81 81 ASP ASP B . n C 1 89 MSE 89 82 82 MSE MSE B . n C 1 90 ILE 90 83 83 ILE ILE B . n C 1 91 ILE 91 84 84 ILE ILE B . n C 1 92 ILE 92 85 85 ILE ILE B . n C 1 93 ARG 93 86 86 ARG ARG B . n C 1 94 MSE 94 87 87 MSE MSE B . n C 1 95 PRO 95 88 88 PRO PRO B . n C 1 96 LYS 96 89 89 LYS LYS B . n C 1 97 ASP 97 90 90 ASP ASP B . n C 1 98 PHE 98 91 91 PHE PHE B . n C 1 99 PRO 99 92 92 PRO PRO B . n C 1 100 PRO 100 93 93 PRO PRO B . n C 1 101 PHE 101 94 94 PHE PHE B . n C 1 102 PRO 102 95 95 PRO PRO B . n C 1 103 GLN 103 96 96 GLN GLN B . n C 1 104 LYS 104 97 97 LYS LYS B . n C 1 105 LEU 105 98 98 LEU LEU B . n C 1 106 LYS 106 99 99 LYS LYS B . n C 1 107 PHE 107 100 100 PHE PHE B . n C 1 108 ARG 108 101 101 ARG ARG B . n C 1 109 GLU 109 102 102 GLU GLU B . n C 1 110 PRO 110 103 103 PRO PRO B . n C 1 111 GLN 111 104 104 GLN GLN B . n C 1 112 ARG 112 105 105 ARG ARG B . n C 1 113 GLU 113 106 106 GLU GLU B . n C 1 114 GLU 114 107 107 GLU GLU B . n C 1 115 ARG 115 108 108 ARG ARG B . n C 1 116 ILE 116 109 109 ILE ILE B . n C 1 117 CYS 117 110 110 CYS CYS B . n C 1 118 LEU 118 111 111 LEU LEU B . n C 1 119 VAL 119 112 112 VAL VAL B . n C 1 120 THR 120 113 113 THR THR B . n C 1 121 THR 121 114 114 THR THR B . n C 1 122 ASN 122 115 115 ASN ASN B . n C 1 123 PHE 123 116 116 PHE PHE B . n C 1 124 GLN 124 117 117 GLN GLN B . n C 1 125 THR 125 118 118 THR THR B . n C 1 126 LYS 126 119 119 LYS LYS B . n C 1 127 SER 127 120 120 SER SER B . n C 1 128 MSE 128 121 121 MSE MSE B . n C 1 129 SER 129 122 122 SER SER B . n C 1 130 SER 130 123 123 SER SER B . n C 1 131 MSE 131 124 124 MSE MSE B . n C 1 132 VAL 132 125 125 VAL VAL B . n C 1 133 SER 133 126 126 SER SER B . n C 1 134 ASP 134 127 127 ASP ASP B . n C 1 135 THR 135 128 128 THR THR B . n C 1 136 SER 136 129 129 SER SER B . n C 1 137 CYS 137 130 130 CYS CYS B . n C 1 138 THR 138 131 131 THR THR B . n C 1 139 PHE 139 132 132 PHE PHE B . n C 1 140 PRO 140 133 133 PRO PRO B . n C 1 141 SER 141 134 134 SER SER B . n C 1 142 SER 142 135 135 SER SER B . n C 1 143 ASP 143 136 136 ASP ASP B . n C 1 144 GLY 144 137 137 GLY GLY B . n C 1 145 ILE 145 138 138 ILE ILE B . n C 1 146 PHE 146 139 139 PHE PHE B . n C 1 147 TRP 147 140 140 TRP TRP B . n C 1 148 LYS 148 141 141 LYS LYS B . n C 1 149 HIS 149 142 142 HIS HIS B . n C 1 150 TRP 150 143 143 TRP TRP B . n C 1 151 ILE 151 144 144 ILE ILE B . n C 1 152 GLN 152 145 145 GLN GLN B . n C 1 153 THR 153 146 146 THR THR B . n C 1 154 LYS 154 147 147 LYS LYS B . n C 1 155 ASP 155 148 148 ASP ASP B . n C 1 156 GLY 156 149 149 GLY GLY B . n C 1 157 GLN 157 150 150 GLN GLN B . n C 1 158 ALA 158 151 151 ALA ALA B . n C 1 159 GLY 159 152 152 GLY GLY B . n C 1 160 SER 160 153 153 SER SER B . n C 1 161 PRO 161 154 154 PRO PRO B . n C 1 162 LEU 162 155 155 LEU LEU B . n C 1 163 VAL 163 156 156 VAL VAL B . n C 1 164 SER 164 157 157 SER SER B . n C 1 165 THR 165 158 158 THR THR B . n C 1 166 ARG 166 159 159 ARG ARG B . n C 1 167 ASP 167 160 160 ASP ASP B . n C 1 168 GLY 168 161 161 GLY GLY B . n C 1 169 PHE 169 162 162 PHE PHE B . n C 1 170 ILE 170 163 163 ILE ILE B . n C 1 171 VAL 171 164 164 VAL VAL B . n C 1 172 GLY 172 165 165 GLY GLY B . n C 1 173 ILE 173 166 166 ILE ILE B . n C 1 174 HIS 174 167 167 HIS HIS B . n C 1 175 SER 175 168 168 SER SER B . n C 1 176 ALA 176 169 169 ALA ALA B . n C 1 177 SER 177 170 170 SER SER B . n C 1 178 ASN 178 171 171 ASN ASN B . n C 1 179 PHE 179 172 172 PHE PHE B . n C 1 180 THR 180 173 173 THR THR B . n C 1 181 ASN 181 174 174 ASN ASN B . n C 1 182 THR 182 175 175 THR THR B . n C 1 183 ASN 183 176 176 ASN ASN B . n C 1 184 ASN 184 177 177 ASN ASN B . n C 1 185 TYR 185 178 178 TYR TYR B . n C 1 186 PHE 186 179 179 PHE PHE B . n C 1 187 THR 187 180 180 THR THR B . n C 1 188 SER 188 181 181 SER SER B . n C 1 189 VAL 189 182 182 VAL VAL B . n C 1 190 PRO 190 183 183 PRO PRO B . n C 1 191 LYS 191 184 184 LYS LYS B . n C 1 192 ASN 192 185 185 ASN ASN B . n C 1 193 PHE 193 186 186 PHE PHE B . n C 1 194 MSE 194 187 187 MSE MSE B . n C 1 195 GLU 195 188 188 GLU GLU B . n C 1 196 LEU 196 189 189 LEU LEU B . n C 1 197 LEU 197 190 190 LEU LEU B . n C 1 198 THR 198 191 191 THR THR B . n C 1 199 ASN 199 192 192 ASN ASN B . n C 1 200 GLN 200 193 193 GLN GLN B . n C 1 201 GLU 201 194 194 GLU GLU B . n C 1 202 ALA 202 195 195 ALA ALA B . n C 1 203 GLN 203 196 196 GLN GLN B . n C 1 204 GLN 204 197 197 GLN GLN B . n C 1 205 TRP 205 198 198 TRP TRP B . n C 1 206 VAL 206 199 199 VAL VAL B . n C 1 207 SER 207 200 200 SER SER B . n C 1 208 GLY 208 201 201 GLY GLY B . n C 1 209 TRP 209 202 202 TRP TRP B . n C 1 210 ARG 210 203 203 ARG ARG B . n C 1 211 LEU 211 204 204 LEU LEU B . n C 1 212 ASN 212 205 205 ASN ASN B . n C 1 213 ALA 213 206 206 ALA ALA B . n C 1 214 ASP 214 207 207 ASP ASP B . n C 1 215 SER 215 208 208 SER SER B . n C 1 216 VAL 216 209 209 VAL VAL B . n C 1 217 LEU 217 210 210 LEU LEU B . n C 1 218 TRP 218 211 211 TRP TRP B . n C 1 219 GLY 219 212 212 GLY GLY B . n C 1 220 GLY 220 213 213 GLY GLY B . n C 1 221 HIS 221 214 214 HIS HIS B . n C 1 222 LYS 222 215 215 LYS LYS B . n C 1 223 VAL 223 216 216 VAL VAL B . n C 1 224 PHE 224 217 217 PHE PHE B . n C 1 225 MSE 225 218 218 MSE MSE B . n C 1 226 SER 226 219 219 SER SER B . n C 1 227 LYS 227 220 220 LYS LYS B . n C 1 228 PRO 228 221 221 PRO PRO B . n C 1 229 GLU 229 222 ? ? ? B . n C 1 230 GLU 230 223 ? ? ? B . n C 1 231 PRO 231 224 ? ? ? B . n C 1 232 PHE 232 225 ? ? ? B . n C 1 233 GLN 233 226 ? ? ? B . n C 1 234 PRO 234 227 ? ? ? B . n C 1 235 VAL 235 228 ? ? ? B . n C 1 236 LYS 236 229 ? ? ? B . n C 1 237 GLU 237 230 ? ? ? B . n C 1 238 ALA 238 231 ? ? ? B . n C 1 239 THR 239 232 ? ? ? B . n C 1 240 GLN 240 233 ? ? ? B . n C 1 241 LEU 241 234 ? ? ? B . n C 1 242 MET 242 235 ? ? ? B . n C 1 243 ASN 243 236 ? ? ? B . n D 2 1 THR 1 301 301 THR THR D . n D 2 2 GLU 2 302 302 GLU GLU D . n D 2 3 ASN 3 303 303 ASN ASN D . n D 2 4 LEU 4 304 304 LEU LEU D . n D 2 5 TYR 5 305 305 TYR TYR D . n D 2 6 PHE 6 306 306 PHE PHE D . n D 2 7 GLN 7 307 307 GLN GLN D . n D 2 8 SER 8 308 308 SER SER D . n D 2 9 GLY 9 309 309 GLY GLY D . n D 2 10 THR 10 310 310 THR THR D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GOL 1 401 401 GOL GOL A . F 3 GOL 1 402 401 GOL GOL B . G 4 HOH 1 402 1 HOH HOH A . G 4 HOH 2 403 2 HOH HOH A . G 4 HOH 3 404 3 HOH HOH A . G 4 HOH 4 405 7 HOH HOH A . G 4 HOH 5 406 8 HOH HOH A . G 4 HOH 6 407 9 HOH HOH A . G 4 HOH 7 408 11 HOH HOH A . G 4 HOH 8 409 15 HOH HOH A . G 4 HOH 9 410 16 HOH HOH A . G 4 HOH 10 411 18 HOH HOH A . G 4 HOH 11 412 20 HOH HOH A . G 4 HOH 12 413 21 HOH HOH A . G 4 HOH 13 414 23 HOH HOH A . G 4 HOH 14 415 25 HOH HOH A . G 4 HOH 15 416 26 HOH HOH A . G 4 HOH 16 417 28 HOH HOH A . G 4 HOH 17 418 29 HOH HOH A . G 4 HOH 18 419 30 HOH HOH A . G 4 HOH 19 420 33 HOH HOH A . G 4 HOH 20 421 34 HOH HOH A . G 4 HOH 21 422 35 HOH HOH A . G 4 HOH 22 423 39 HOH HOH A . G 4 HOH 23 424 42 HOH HOH A . G 4 HOH 24 425 44 HOH HOH A . G 4 HOH 25 426 46 HOH HOH A . G 4 HOH 26 427 48 HOH HOH A . G 4 HOH 27 428 50 HOH HOH A . G 4 HOH 28 429 52 HOH HOH A . G 4 HOH 29 430 55 HOH HOH A . G 4 HOH 30 431 56 HOH HOH A . G 4 HOH 31 432 58 HOH HOH A . G 4 HOH 32 433 59 HOH HOH A . G 4 HOH 33 434 60 HOH HOH A . G 4 HOH 34 435 61 HOH HOH A . G 4 HOH 35 436 64 HOH HOH A . G 4 HOH 36 437 66 HOH HOH A . G 4 HOH 37 438 70 HOH HOH A . G 4 HOH 38 439 77 HOH HOH A . G 4 HOH 39 440 78 HOH HOH A . G 4 HOH 40 441 79 HOH HOH A . G 4 HOH 41 442 80 HOH HOH A . G 4 HOH 42 443 81 HOH HOH A . G 4 HOH 43 444 85 HOH HOH A . G 4 HOH 44 445 88 HOH HOH A . G 4 HOH 45 446 90 HOH HOH A . G 4 HOH 46 447 91 HOH HOH A . G 4 HOH 47 448 92 HOH HOH A . G 4 HOH 48 449 94 HOH HOH A . G 4 HOH 49 450 96 HOH HOH A . G 4 HOH 50 451 98 HOH HOH A . G 4 HOH 51 452 99 HOH HOH A . G 4 HOH 52 453 100 HOH HOH A . G 4 HOH 53 454 102 HOH HOH A . G 4 HOH 54 455 103 HOH HOH A . G 4 HOH 55 456 106 HOH HOH A . G 4 HOH 56 457 107 HOH HOH A . G 4 HOH 57 458 110 HOH HOH A . G 4 HOH 58 459 113 HOH HOH A . G 4 HOH 59 460 114 HOH HOH A . G 4 HOH 60 461 118 HOH HOH A . G 4 HOH 61 462 119 HOH HOH A . G 4 HOH 62 463 121 HOH HOH A . G 4 HOH 63 464 122 HOH HOH A . G 4 HOH 64 465 123 HOH HOH A . G 4 HOH 65 466 130 HOH HOH A . G 4 HOH 66 467 135 HOH HOH A . G 4 HOH 67 468 137 HOH HOH A . G 4 HOH 68 469 138 HOH HOH A . G 4 HOH 69 470 140 HOH HOH A . G 4 HOH 70 471 141 HOH HOH A . G 4 HOH 71 472 142 HOH HOH A . G 4 HOH 72 473 143 HOH HOH A . G 4 HOH 73 474 144 HOH HOH A . G 4 HOH 74 475 146 HOH HOH A . G 4 HOH 75 476 147 HOH HOH A . G 4 HOH 76 477 149 HOH HOH A . G 4 HOH 77 478 158 HOH HOH A . G 4 HOH 78 479 159 HOH HOH A . G 4 HOH 79 480 160 HOH HOH A . G 4 HOH 80 481 162 HOH HOH A . G 4 HOH 81 482 163 HOH HOH A . G 4 HOH 82 483 166 HOH HOH A . G 4 HOH 83 484 168 HOH HOH A . G 4 HOH 84 485 172 HOH HOH A . G 4 HOH 85 486 182 HOH HOH A . H 4 HOH 1 51 51 HOH HOH C . H 4 HOH 2 109 109 HOH HOH C . H 4 HOH 3 170 170 HOH HOH C . H 4 HOH 4 171 171 HOH HOH C . I 4 HOH 1 403 4 HOH HOH B . I 4 HOH 2 404 5 HOH HOH B . I 4 HOH 3 405 6 HOH HOH B . I 4 HOH 4 406 10 HOH HOH B . I 4 HOH 5 407 12 HOH HOH B . I 4 HOH 6 408 13 HOH HOH B . I 4 HOH 7 409 14 HOH HOH B . I 4 HOH 8 410 17 HOH HOH B . I 4 HOH 9 411 19 HOH HOH B . I 4 HOH 10 412 22 HOH HOH B . I 4 HOH 11 413 24 HOH HOH B . I 4 HOH 12 414 27 HOH HOH B . I 4 HOH 13 415 31 HOH HOH B . I 4 HOH 14 416 32 HOH HOH B . I 4 HOH 15 417 36 HOH HOH B . I 4 HOH 16 418 37 HOH HOH B . I 4 HOH 17 419 38 HOH HOH B . I 4 HOH 18 420 40 HOH HOH B . I 4 HOH 19 421 41 HOH HOH B . I 4 HOH 20 422 43 HOH HOH B . I 4 HOH 21 423 45 HOH HOH B . I 4 HOH 22 424 47 HOH HOH B . I 4 HOH 23 425 49 HOH HOH B . I 4 HOH 24 426 53 HOH HOH B . I 4 HOH 25 427 54 HOH HOH B . I 4 HOH 26 428 57 HOH HOH B . I 4 HOH 27 429 62 HOH HOH B . I 4 HOH 28 430 63 HOH HOH B . I 4 HOH 29 431 65 HOH HOH B . I 4 HOH 30 432 67 HOH HOH B . I 4 HOH 31 433 68 HOH HOH B . I 4 HOH 32 434 69 HOH HOH B . I 4 HOH 33 435 71 HOH HOH B . I 4 HOH 34 436 72 HOH HOH B . I 4 HOH 35 437 73 HOH HOH B . I 4 HOH 36 438 74 HOH HOH B . I 4 HOH 37 439 75 HOH HOH B . I 4 HOH 38 440 76 HOH HOH B . I 4 HOH 39 441 82 HOH HOH B . I 4 HOH 40 442 83 HOH HOH B . I 4 HOH 41 443 84 HOH HOH B . I 4 HOH 42 444 86 HOH HOH B . I 4 HOH 43 445 87 HOH HOH B . I 4 HOH 44 446 89 HOH HOH B . I 4 HOH 45 447 93 HOH HOH B . I 4 HOH 46 448 95 HOH HOH B . I 4 HOH 47 449 101 HOH HOH B . I 4 HOH 48 450 104 HOH HOH B . I 4 HOH 49 451 105 HOH HOH B . I 4 HOH 50 452 108 HOH HOH B . I 4 HOH 51 453 111 HOH HOH B . I 4 HOH 52 454 112 HOH HOH B . I 4 HOH 53 455 115 HOH HOH B . I 4 HOH 54 456 116 HOH HOH B . I 4 HOH 55 457 117 HOH HOH B . I 4 HOH 56 458 120 HOH HOH B . I 4 HOH 57 459 124 HOH HOH B . I 4 HOH 58 460 125 HOH HOH B . I 4 HOH 59 461 126 HOH HOH B . I 4 HOH 60 462 127 HOH HOH B . I 4 HOH 61 463 128 HOH HOH B . I 4 HOH 62 464 129 HOH HOH B . I 4 HOH 63 465 131 HOH HOH B . I 4 HOH 64 466 132 HOH HOH B . I 4 HOH 65 467 133 HOH HOH B . I 4 HOH 66 468 134 HOH HOH B . I 4 HOH 67 469 136 HOH HOH B . I 4 HOH 68 470 139 HOH HOH B . I 4 HOH 69 471 145 HOH HOH B . I 4 HOH 70 472 148 HOH HOH B . I 4 HOH 71 473 150 HOH HOH B . I 4 HOH 72 474 151 HOH HOH B . I 4 HOH 73 475 152 HOH HOH B . I 4 HOH 74 476 153 HOH HOH B . I 4 HOH 75 477 154 HOH HOH B . I 4 HOH 76 478 155 HOH HOH B . I 4 HOH 77 479 156 HOH HOH B . I 4 HOH 78 480 157 HOH HOH B . I 4 HOH 79 481 161 HOH HOH B . I 4 HOH 80 482 164 HOH HOH B . I 4 HOH 81 483 165 HOH HOH B . I 4 HOH 82 484 167 HOH HOH B . I 4 HOH 83 485 173 HOH HOH B . I 4 HOH 84 486 174 HOH HOH B . I 4 HOH 85 487 175 HOH HOH B . I 4 HOH 86 488 176 HOH HOH B . I 4 HOH 87 489 177 HOH HOH B . I 4 HOH 88 490 178 HOH HOH B . I 4 HOH 89 491 179 HOH HOH B . I 4 HOH 90 492 180 HOH HOH B . I 4 HOH 91 493 181 HOH HOH B . J 4 HOH 1 97 97 HOH HOH D . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 89 A MSE 82 ? MET SELENOMETHIONINE 2 A MSE 94 A MSE 87 ? MET SELENOMETHIONINE 3 A MSE 128 A MSE 121 ? MET SELENOMETHIONINE 4 A MSE 131 A MSE 124 ? MET SELENOMETHIONINE 5 A MSE 194 A MSE 187 ? MET SELENOMETHIONINE 6 A MSE 225 A MSE 218 ? MET SELENOMETHIONINE 7 C MSE 89 B MSE 82 ? MET SELENOMETHIONINE 8 C MSE 94 B MSE 87 ? MET SELENOMETHIONINE 9 C MSE 128 B MSE 121 ? MET SELENOMETHIONINE 10 C MSE 131 B MSE 124 ? MET SELENOMETHIONINE 11 C MSE 194 B MSE 187 ? MET SELENOMETHIONINE 12 C MSE 225 B MSE 218 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 3 software_defined_assembly PISA hexadecameric 16 4 software_defined_assembly PISA octameric 8 5 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,G,H 2 1 C,D,F,I,J 3 1,2,3,4 A,B,C,D,E,F,G,H,I,J 4 1,2 A,B,C,D,E,F,G,H,I,J 5 1 A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1980 ? 1 MORE -8 ? 1 'SSA (A^2)' 10570 ? 2 'ABSA (A^2)' 1980 ? 2 MORE -9 ? 2 'SSA (A^2)' 10550 ? 3 'ABSA (A^2)' 26620 ? 3 MORE -135 ? 3 'SSA (A^2)' 73700 ? 4 'ABSA (A^2)' 12790 ? 4 MORE -60 ? 4 'SSA (A^2)' 37370 ? 5 'ABSA (A^2)' 5760 ? 5 MORE -28 ? 5 'SSA (A^2)' 19320 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 125.3170000000 0.0000000000 -1.0000000000 0.0000000000 125.3170000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 4 'crystal symmetry operation' 8_665 -y+1,-x+1,-z 0.0000000000 -1.0000000000 0.0000000000 125.3170000000 -1.0000000000 0.0000000000 0.0000000000 125.3170000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-11-27 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_ref_seq_dif 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SCALEPACK 'data scaling' . ? 2 SOLVE phasing . ? 3 CNS refinement 1.0 ? 4 HKL-2000 'data reduction' . ? 5 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 SG _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 CYS _pdbx_validate_symm_contact.auth_seq_id_1 130 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 SG _pdbx_validate_symm_contact.auth_asym_id_2 B _pdbx_validate_symm_contact.auth_comp_id_2 CYS _pdbx_validate_symm_contact.auth_seq_id_2 130 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 7_555 _pdbx_validate_symm_contact.dist 1.43 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 LEU _pdbx_validate_rmsd_angle.auth_seq_id_1 155 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 LEU _pdbx_validate_rmsd_angle.auth_seq_id_2 155 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CG _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 LEU _pdbx_validate_rmsd_angle.auth_seq_id_3 155 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 100.80 _pdbx_validate_rmsd_angle.angle_target_value 115.30 _pdbx_validate_rmsd_angle.angle_deviation -14.50 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 46 ? ? -68.46 3.31 2 1 ASN A 51 ? ? -154.49 74.13 3 1 ASN A 52 ? ? -161.37 54.52 4 1 PRO A 88 ? ? -49.11 151.46 5 1 SER A 135 ? ? 40.16 -115.79 6 1 SER A 168 ? ? -126.36 -57.46 7 1 GLN A 197 ? ? -118.35 74.95 8 1 GLN C 307 ? ? -89.02 47.55 9 1 HIS B 46 ? ? -66.23 4.34 10 1 PHE B 48 ? ? -100.45 44.01 11 1 ASN B 51 ? ? -158.02 77.14 12 1 ASN B 52 ? ? -164.95 50.79 13 1 PRO B 88 ? ? -48.91 152.59 14 1 PRO B 95 ? ? -69.24 -172.25 15 1 GLN B 96 ? ? -142.33 42.54 16 1 SER B 135 ? ? 44.53 -110.02 17 1 SER B 168 ? ? -130.59 -57.47 18 1 ASN B 205 ? ? -140.82 57.72 19 1 GLN D 307 ? ? -87.78 46.18 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 67 ? CG ? A LYS 74 CG 2 1 Y 0 A LYS 67 ? CD ? A LYS 74 CD 3 1 Y 0 A LYS 67 ? CE ? A LYS 74 CE 4 1 Y 0 A LYS 67 ? NZ ? A LYS 74 NZ 5 1 Y 0 A LYS 89 ? CG ? A LYS 96 CG 6 1 Y 0 A LYS 89 ? CD ? A LYS 96 CD 7 1 Y 0 A LYS 89 ? CE ? A LYS 96 CE 8 1 Y 0 A LYS 89 ? NZ ? A LYS 96 NZ 9 1 Y 0 A ASP 136 ? OD1 ? A ASP 143 OD1 10 1 Y 0 A ASP 136 ? OD2 ? A ASP 143 OD2 11 1 Y 0 A LYS 147 ? CG ? A LYS 154 CG 12 1 Y 0 A LYS 147 ? CD ? A LYS 154 CD 13 1 Y 0 A LYS 147 ? CE ? A LYS 154 CE 14 1 Y 0 A LYS 147 ? NZ ? A LYS 154 NZ 15 1 Y 0 A LYS 184 ? CG ? A LYS 191 CG 16 1 Y 0 A LYS 184 ? CD ? A LYS 191 CD 17 1 Y 0 A LYS 184 ? CE ? A LYS 191 CE 18 1 Y 0 A LYS 184 ? NZ ? A LYS 191 NZ 19 1 Y 0 A GLN 193 ? CD ? A GLN 200 CD 20 1 Y 0 A GLN 193 ? OE1 ? A GLN 200 OE1 21 1 Y 0 A GLN 193 ? NE2 ? A GLN 200 NE2 22 1 Y 0 A ASP 207 ? CB ? A ASP 214 CB 23 1 Y 0 A ASP 207 ? CG ? A ASP 214 CG 24 1 Y 0 A ASP 207 ? OD1 ? A ASP 214 OD1 25 1 Y 0 A ASP 207 ? OD2 ? A ASP 214 OD2 26 1 Y 0 B GLU 24 ? CD ? C GLU 31 CD 27 1 Y 0 B GLU 24 ? OE1 ? C GLU 31 OE1 28 1 Y 0 B GLU 24 ? OE2 ? C GLU 31 OE2 29 1 Y 0 B LYS 67 ? CG ? C LYS 74 CG 30 1 Y 0 B LYS 67 ? CD ? C LYS 74 CD 31 1 Y 0 B LYS 67 ? CE ? C LYS 74 CE 32 1 Y 0 B LYS 67 ? NZ ? C LYS 74 NZ 33 1 Y 0 B LYS 89 ? CG ? C LYS 96 CG 34 1 Y 0 B LYS 89 ? CD ? C LYS 96 CD 35 1 Y 0 B LYS 89 ? CE ? C LYS 96 CE 36 1 Y 0 B LYS 89 ? NZ ? C LYS 96 NZ 37 1 Y 0 B ASP 136 ? OD1 ? C ASP 143 OD1 38 1 Y 0 B ASP 136 ? OD2 ? C ASP 143 OD2 39 1 Y 0 B LYS 141 ? CG ? C LYS 148 CG 40 1 Y 0 B LYS 141 ? CD ? C LYS 148 CD 41 1 Y 0 B LYS 141 ? CE ? C LYS 148 CE 42 1 Y 0 B LYS 141 ? NZ ? C LYS 148 NZ 43 1 Y 0 B GLN 145 ? CG ? C GLN 152 CG 44 1 Y 0 B GLN 145 ? CD ? C GLN 152 CD 45 1 Y 0 B GLN 145 ? OE1 ? C GLN 152 OE1 46 1 Y 0 B GLN 145 ? NE2 ? C GLN 152 NE2 47 1 Y 0 B LYS 147 ? CD ? C LYS 154 CD 48 1 Y 0 B LYS 147 ? CE ? C LYS 154 CE 49 1 Y 0 B LYS 147 ? NZ ? C LYS 154 NZ 50 1 Y 0 B GLN 193 ? CD ? C GLN 200 CD 51 1 Y 0 B GLN 193 ? OE1 ? C GLN 200 OE1 52 1 Y 0 B GLN 193 ? NE2 ? C GLN 200 NE2 53 1 Y 0 B GLU 194 ? CG ? C GLU 201 CG 54 1 Y 0 B GLU 194 ? CD ? C GLU 201 CD 55 1 Y 0 B GLU 194 ? OE1 ? C GLU 201 OE1 56 1 Y 0 B GLU 194 ? OE2 ? C GLU 201 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -7 ? A SER 1 2 1 Y 1 A HIS -6 ? A HIS 2 3 1 Y 1 A HIS -5 ? A HIS 3 4 1 Y 1 A HIS -4 ? A HIS 4 5 1 Y 1 A HIS -3 ? A HIS 5 6 1 Y 1 A HIS -2 ? A HIS 6 7 1 Y 1 A HIS -1 ? A HIS 7 8 1 Y 1 A GLY 1 ? A GLY 8 9 1 Y 1 A GLU 2 ? A GLU 9 10 1 Y 1 A SER 3 ? A SER 10 11 1 Y 1 A LEU 4 ? A LEU 11 12 1 Y 1 A PHE 5 ? A PHE 12 13 1 Y 1 A LYS 6 ? A LYS 13 14 1 Y 1 A GLY 7 ? A GLY 14 15 1 Y 1 A GLU 222 ? A GLU 229 16 1 Y 1 A GLU 223 ? A GLU 230 17 1 Y 1 A PRO 224 ? A PRO 231 18 1 Y 1 A PHE 225 ? A PHE 232 19 1 Y 1 A GLN 226 ? A GLN 233 20 1 Y 1 A PRO 227 ? A PRO 234 21 1 Y 1 A VAL 228 ? A VAL 235 22 1 Y 1 A LYS 229 ? A LYS 236 23 1 Y 1 A GLU 230 ? A GLU 237 24 1 Y 1 A ALA 231 ? A ALA 238 25 1 Y 1 A THR 232 ? A THR 239 26 1 Y 1 A GLN 233 ? A GLN 240 27 1 Y 1 A LEU 234 ? A LEU 241 28 1 Y 1 A MET 235 ? A MET 242 29 1 Y 1 A ASN 236 ? A ASN 243 30 1 Y 1 B SER -7 ? C SER 1 31 1 Y 1 B HIS -6 ? C HIS 2 32 1 Y 1 B HIS -5 ? C HIS 3 33 1 Y 1 B HIS -4 ? C HIS 4 34 1 Y 1 B HIS -3 ? C HIS 5 35 1 Y 1 B HIS -2 ? C HIS 6 36 1 Y 1 B HIS -1 ? C HIS 7 37 1 Y 1 B GLY 1 ? C GLY 8 38 1 Y 1 B GLU 2 ? C GLU 9 39 1 Y 1 B SER 3 ? C SER 10 40 1 Y 1 B LEU 4 ? C LEU 11 41 1 Y 1 B PHE 5 ? C PHE 12 42 1 Y 1 B LYS 6 ? C LYS 13 43 1 Y 1 B GLY 7 ? C GLY 14 44 1 Y 1 B GLU 222 ? C GLU 229 45 1 Y 1 B GLU 223 ? C GLU 230 46 1 Y 1 B PRO 224 ? C PRO 231 47 1 Y 1 B PHE 225 ? C PHE 232 48 1 Y 1 B GLN 226 ? C GLN 233 49 1 Y 1 B PRO 227 ? C PRO 234 50 1 Y 1 B VAL 228 ? C VAL 235 51 1 Y 1 B LYS 229 ? C LYS 236 52 1 Y 1 B GLU 230 ? C GLU 237 53 1 Y 1 B ALA 231 ? C ALA 238 54 1 Y 1 B THR 232 ? C THR 239 55 1 Y 1 B GLN 233 ? C GLN 240 56 1 Y 1 B LEU 234 ? C LEU 241 57 1 Y 1 B MET 235 ? C MET 242 58 1 Y 1 B ASN 236 ? C ASN 243 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 GLYCEROL GOL 4 water HOH #