data_1LVS # _entry.id 1LVS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1LVS pdb_00001lvs 10.2210/pdb1lvs/pdb RCSB RCSB016323 ? ? WWPDB D_1000016323 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1LVS _pdbx_database_status.recvd_initial_deposition_date 2002-05-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Crnugelj, M.' 1 'Hud, N.V.' 2 'Plavec, J.' 3 # _citation.id primary _citation.title 'The solution structure of d(G(4)T(4)G(3))(2): a bimolecular G-quadruplex with a novel fold.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 320 _citation.page_first 911 _citation.page_last 924 _citation.year 2002 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12126614 _citation.pdbx_database_id_DOI '10.1016/S0022-2836(02)00569-7' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Crnugelj, M.' 1 ? primary 'Hud, N.V.' 2 ? primary 'Plavec, J.' 3 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description "5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*G)-3'" _entity.formula_weight 3476.254 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details 'G-rich DNA oligomer' # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DG)(DG)(DG)(DT)(DT)(DT)(DT)(DG)(DG)(DG)' _entity_poly.pdbx_seq_one_letter_code_can GGGGTTTTGGG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DG n 1 4 DG n 1 5 DT n 1 6 DT n 1 7 DT n 1 8 DT n 1 9 DG n 1 10 DG n 1 11 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Oligomer has been prepared on solid state support using phosphoramidite chemistry.' # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1LVS _struct_ref.pdbx_db_accession 1LVS _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1LVS A 1 ? 11 ? 1LVS 1 ? 11 ? 1 11 2 1 1LVS B 1 ? 11 ? 1LVS 12 ? 22 ? 12 22 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 '2D NOESY' 2 1 2 PE-COSY 3 1 2 '2D TOCSY' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature_units 1 273 ambient 7.2 '50 mM' ? K 2 298 ambient 7.2 '50 mM' ? K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '5 mM dG4T4G3 per strand; 90%H2O, 10% D2O; 50 mM NaCl; pH 7.2' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.field_strength 1 ? Varian INOVA 600 2 ? Bruker DRX 500 # _pdbx_nmr_refine.entry_id 1LVS _pdbx_nmr_refine.method 'simulated annealing, molecular dynamics' _pdbx_nmr_refine.details ;517 NOE-derived distance restraints associated with the nonexchangeable and exchangeable protons; 24 hydrogen-bond restraints; 95 torsion angle restraints for sugar moieties. Thirty 250 ps simulated annealing calculations at 800 K were initially performed. Further refinement via solvated MD simulations (750ps, TIP3P water, particle mesh Ewald method) followed by energy minimization. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1LVS _pdbx_nmr_details.text 'This structure was determined using standard 2D homonuclear techniques.' # _pdbx_nmr_ensemble.entry_id 1LVS _pdbx_nmr_ensemble.conformers_calculated_total_number 30 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1LVS _pdbx_nmr_representative.conformer_id 10 _pdbx_nmr_representative.selection_criteria 'fewest violations, lowest energy' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal VNMR 6.1A collection ? 1 Felix 2000 processing ? 2 Amber 6.0 refinement 'Kollman et.al.' 3 # _exptl.entry_id 1LVS _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.crystal_id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1LVS _struct.title 'THE SOLUTION STRUCTURE OF D(G4T4G3)2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1LVS _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'G-quartet, cation coordination, telomeric repeat, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N7 ? ? ? 1_555 B DG 4 N2 ? ? A DG 1 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DG 4 N1 ? ? A DG 1 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DG 9 O6 ? ? A DG 1 B DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DG 9 N7 ? ? A DG 1 B DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DG 3 O6 ? ? A DG 2 B DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DG 3 N7 ? ? A DG 2 B DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 2 N7 ? ? ? 1_555 B DG 10 N2 ? ? A DG 2 B DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DG 10 N1 ? ? A DG 2 B DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DG 3 N7 ? ? ? 1_555 B DG 2 N2 ? ? A DG 3 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DG 2 N1 ? ? A DG 3 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DG 11 O6 ? ? A DG 3 B DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DG 11 N7 ? ? A DG 3 B DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DT 5 N3 ? ? ? 1_555 A DT 8 O4 ? ? A DT 5 A DT 8 1_555 ? ? ? ? ? ? 'DT-DT MISPAIR' ? ? ? hydrog14 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DG 2 O6 ? ? A DG 9 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DG 2 N7 ? ? A DG 9 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 9 N7 ? ? ? 1_555 B DG 11 N2 ? ? A DG 9 B DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DG 11 N1 ? ? A DG 9 B DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 10 N7 ? ? ? 1_555 B DG 3 N2 ? ? A DG 10 B DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DG 3 N1 ? ? A DG 10 B DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DG 10 O6 ? ? A DG 10 B DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DG 10 N7 ? ? A DG 10 B DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DG 4 O6 ? ? A DG 11 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 11 N2 ? ? ? 1_555 B DG 4 N7 ? ? A DG 11 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DG 11 N7 ? ? ? 1_555 B DG 9 N2 ? ? A DG 11 B DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A DG 11 O6 ? ? ? 1_555 B DG 9 N1 ? ? A DG 11 B DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? B DG 4 N2 ? ? ? 1_555 B DT 7 O4 ? ? B DG 15 B DT 18 1_555 ? ? ? ? ? ? 'DG-DT MISPAIR' ? ? ? hydrog27 hydrog ? ? B DT 5 O2 ? ? ? 1_555 B DT 7 N3 ? ? B DT 16 B DT 18 1_555 ? ? ? ? ? ? 'DT-DT MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1LVS _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1LVS _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 DG 3 3 3 DG G A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DT 5 5 5 DT T A . n A 1 6 DT 6 6 6 DT T A . n A 1 7 DT 7 7 7 DT T A . n A 1 8 DT 8 8 8 DT T A . n A 1 9 DG 9 9 9 DG G A . n A 1 10 DG 10 10 10 DG G A . n A 1 11 DG 11 11 11 DG G A . n B 1 1 DG 1 12 12 DG G B . n B 1 2 DG 2 13 13 DG G B . n B 1 3 DG 3 14 14 DG G B . n B 1 4 DG 4 15 15 DG G B . n B 1 5 DT 5 16 16 DT T B . n B 1 6 DT 6 17 17 DT T B . n B 1 7 DT 7 18 18 DT T B . n B 1 8 DT 8 19 19 DT T B . n B 1 9 DG 9 20 20 DG G B . n B 1 10 DG 10 21 21 DG G B . n B 1 11 DG 11 22 22 DG G B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-07-24 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 1 ? ? "C4'" A DG 1 ? ? "C3'" A DG 1 ? ? 109.83 106.00 3.83 0.60 N 2 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.86 108.30 5.56 0.30 N 3 1 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 112.25 108.30 3.95 0.30 N 4 1 C4 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 123.70 119.00 4.70 0.60 N 5 1 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 115.52 122.90 -7.38 0.60 N 6 1 N3 A DT 7 ? ? C2 A DT 7 ? ? O2 A DT 7 ? ? 118.58 122.30 -3.72 0.60 N 7 1 N3 A DT 8 ? ? C2 A DT 8 ? ? O2 A DT 8 ? ? 118.70 122.30 -3.60 0.60 N 8 1 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 118.74 122.90 -4.16 0.60 N 9 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 114.39 108.30 6.09 0.30 N 10 1 "C4'" A DG 10 ? ? "C3'" A DG 10 ? ? "C2'" A DG 10 ? ? 97.07 102.20 -5.13 0.70 N 11 1 "C3'" A DG 11 ? ? "C2'" A DG 11 ? ? "C1'" A DG 11 ? ? 97.58 102.40 -4.82 0.80 N 12 1 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 113.01 108.30 4.71 0.30 N 13 1 C4 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 124.17 119.00 5.17 0.60 N 14 1 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 115.50 122.90 -7.40 0.60 N 15 1 "O4'" B DT 17 ? ? "C4'" B DT 17 ? ? "C3'" B DT 17 ? ? 109.82 106.00 3.82 0.60 N 16 1 C6 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 117.50 122.90 -5.40 0.60 N 17 1 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 117.81 122.90 -5.09 0.60 N 18 1 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 114.91 108.30 6.61 0.30 N 19 2 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 112.46 108.30 4.16 0.30 N 20 2 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 114.86 108.30 6.56 0.30 N 21 2 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 114.55 108.30 6.25 0.30 N 22 2 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 112.88 108.30 4.58 0.30 N 23 2 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 117.16 122.90 -5.74 0.60 N 24 2 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 111.00 108.30 2.70 0.30 N 25 2 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.11 108.30 1.81 0.30 N 26 2 N3 A DT 7 ? ? C2 A DT 7 ? ? O2 A DT 7 ? ? 118.33 122.30 -3.97 0.60 N 27 2 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 117.86 122.90 -5.04 0.60 N 28 2 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 114.96 108.30 6.66 0.30 N 29 2 "C4'" A DG 10 ? ? "C3'" A DG 10 ? ? "C2'" A DG 10 ? ? 97.66 102.20 -4.54 0.70 N 30 2 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 113.95 108.30 5.65 0.30 N 31 2 N3 B DG 14 ? ? C4 B DG 14 ? ? C5 B DG 14 ? ? 125.58 128.60 -3.02 0.50 N 32 2 C4 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 123.30 119.00 4.30 0.60 N 33 2 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 116.36 122.90 -6.54 0.60 N 34 2 "O4'" B DT 17 ? ? "C1'" B DT 17 ? ? N1 B DT 17 ? ? 110.31 108.30 2.01 0.30 N 35 2 C6 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 117.43 122.90 -5.47 0.60 N 36 2 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 118.42 122.90 -4.48 0.60 N 37 2 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 115.42 108.30 7.12 0.30 N 38 2 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 112.56 108.30 4.26 0.30 N 39 2 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 114.50 108.30 6.20 0.30 N 40 2 N3 B DG 22 ? ? C2 B DG 22 ? ? N2 B DG 22 ? ? 113.79 119.90 -6.11 0.70 N 41 3 "O4'" A DG 1 ? ? "C4'" A DG 1 ? ? "C3'" A DG 1 ? ? 109.95 106.00 3.95 0.60 N 42 3 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 110.18 108.30 1.88 0.30 N 43 3 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.11 108.30 4.81 0.30 N 44 3 "C4'" A DG 3 ? ? "C3'" A DG 3 ? ? "C2'" A DG 3 ? ? 97.96 102.20 -4.24 0.70 N 45 3 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.86 108.30 2.56 0.30 N 46 3 C4 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 123.32 119.00 4.32 0.60 N 47 3 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 116.20 122.90 -6.70 0.60 N 48 3 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 110.12 108.30 1.82 0.30 N 49 3 N3 A DT 7 ? ? C2 A DT 7 ? ? O2 A DT 7 ? ? 118.68 122.30 -3.62 0.60 N 50 3 N3 A DT 8 ? ? C2 A DT 8 ? ? O2 A DT 8 ? ? 118.58 122.30 -3.72 0.60 N 51 3 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 118.45 122.90 -4.45 0.60 N 52 3 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.22 108.30 2.92 0.30 N 53 3 "C4'" A DG 10 ? ? "C3'" A DG 10 ? ? "C2'" A DG 10 ? ? 96.46 102.20 -5.74 0.70 N 54 3 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 110.38 108.30 2.08 0.30 N 55 3 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 111.54 108.30 3.24 0.30 N 56 3 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 114.49 108.30 6.19 0.30 N 57 3 N3 B DG 14 ? ? C4 B DG 14 ? ? C5 B DG 14 ? ? 125.47 128.60 -3.13 0.50 N 58 3 C4 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 124.29 119.00 5.29 0.60 N 59 3 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 115.50 122.90 -7.40 0.60 N 60 3 "O4'" B DT 17 ? ? "C4'" B DT 17 ? ? "C3'" B DT 17 ? ? 109.67 106.00 3.67 0.60 N 61 3 C6 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 116.80 122.90 -6.10 0.60 N 62 3 "O4'" B DT 18 ? ? "C1'" B DT 18 ? ? N1 B DT 18 ? ? 113.52 108.30 5.22 0.30 N 63 3 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 118.07 122.90 -4.83 0.60 N 64 3 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 111.91 108.30 3.61 0.30 N 65 3 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 111.40 108.30 3.10 0.30 N 66 3 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 110.95 108.30 2.65 0.30 N 67 4 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 110.17 108.30 1.87 0.30 N 68 4 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 114.03 108.30 5.73 0.30 N 69 4 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.22 108.30 3.92 0.30 N 70 4 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 112.03 108.30 3.73 0.30 N 71 4 C4 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 123.39 119.00 4.39 0.60 N 72 4 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 115.76 122.90 -7.14 0.60 N 73 4 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 111.87 108.30 3.57 0.30 N 74 4 C6 A DT 6 ? ? C5 A DT 6 ? ? C7 A DT 6 ? ? 118.85 122.90 -4.05 0.60 N 75 4 N3 A DT 7 ? ? C2 A DT 7 ? ? O2 A DT 7 ? ? 118.40 122.30 -3.90 0.60 N 76 4 N3 A DT 8 ? ? C2 A DT 8 ? ? O2 A DT 8 ? ? 118.58 122.30 -3.72 0.60 N 77 4 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 118.80 122.90 -4.10 0.60 N 78 4 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.85 108.30 4.55 0.30 N 79 4 "C4'" A DG 10 ? ? "C3'" A DG 10 ? ? "C2'" A DG 10 ? ? 97.36 102.20 -4.84 0.70 N 80 4 "C3'" A DG 11 ? ? "C2'" A DG 11 ? ? "C1'" A DG 11 ? ? 97.42 102.40 -4.98 0.80 N 81 4 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 113.66 108.30 5.36 0.30 N 82 4 "O4'" B DT 16 ? ? "C4'" B DT 16 ? ? "C3'" B DT 16 ? ? 109.96 106.00 3.96 0.60 N 83 4 C4 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 123.98 119.00 4.98 0.60 N 84 4 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 115.49 122.90 -7.41 0.60 N 85 4 C6 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 117.33 122.90 -5.57 0.60 N 86 4 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 118.41 122.90 -4.49 0.60 N 87 4 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 113.79 108.30 5.49 0.30 N 88 4 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 112.23 108.30 3.93 0.30 N 89 4 N3 B DG 22 ? ? C2 B DG 22 ? ? N2 B DG 22 ? ? 114.80 119.90 -5.10 0.70 N 90 5 N3 A DG 1 ? ? C2 A DG 1 ? ? N2 A DG 1 ? ? 115.08 119.90 -4.82 0.70 N 91 5 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.25 108.30 4.95 0.30 N 92 5 "C3'" A DG 3 ? ? "C2'" A DG 3 ? ? "C1'" A DG 3 ? ? 97.08 102.40 -5.32 0.80 N 93 5 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.59 108.30 3.29 0.30 N 94 5 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.48 108.30 3.18 0.30 N 95 5 C4 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 123.10 119.00 4.10 0.60 N 96 5 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 115.93 122.90 -6.97 0.60 N 97 5 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 110.83 108.30 2.53 0.30 N 98 5 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.12 108.30 1.82 0.30 N 99 5 N3 A DT 7 ? ? C2 A DT 7 ? ? O2 A DT 7 ? ? 117.81 122.30 -4.49 0.60 N 100 5 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.19 122.90 -3.71 0.60 N 101 5 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.54 108.30 4.24 0.30 N 102 5 "C4'" A DG 10 ? ? "C3'" A DG 10 ? ? "C2'" A DG 10 ? ? 96.99 102.20 -5.21 0.70 N 103 5 "C3'" A DG 11 ? ? "C2'" A DG 11 ? ? "C1'" A DG 11 ? ? 97.25 102.40 -5.15 0.80 N 104 5 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 114.42 108.30 6.12 0.30 N 105 5 C5 B DG 12 ? ? C6 B DG 12 ? ? N1 B DG 12 ? ? 114.56 111.50 3.06 0.50 N 106 5 C4 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 123.47 119.00 4.47 0.60 N 107 5 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 116.13 122.90 -6.77 0.60 N 108 5 C6 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 117.08 122.90 -5.82 0.60 N 109 5 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 118.01 122.90 -4.89 0.60 N 110 5 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 112.37 108.30 4.07 0.30 N 111 5 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 113.50 108.30 5.20 0.30 N 112 6 "O4'" A DG 1 ? ? "C4'" A DG 1 ? ? "C3'" A DG 1 ? ? 109.62 106.00 3.62 0.60 N 113 6 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.16 108.30 2.86 0.30 N 114 6 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.94 108.30 4.64 0.30 N 115 6 "C3'" A DG 3 ? ? "C2'" A DG 3 ? ? "C1'" A DG 3 ? ? 97.09 102.40 -5.31 0.80 N 116 6 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.97 108.30 2.67 0.30 N 117 6 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.02 108.30 2.72 0.30 N 118 6 C4 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 123.60 119.00 4.60 0.60 N 119 6 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 115.86 122.90 -7.04 0.60 N 120 6 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 118.98 122.90 -3.92 0.60 N 121 6 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 117.42 122.90 -5.48 0.60 N 122 6 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.49 108.30 4.19 0.30 N 123 6 "C4'" A DG 10 ? ? "C3'" A DG 10 ? ? "C2'" A DG 10 ? ? 96.81 102.20 -5.39 0.70 N 124 6 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 112.99 108.30 4.69 0.30 N 125 6 "O4'" B DT 16 ? ? "C4'" B DT 16 ? ? "C3'" B DT 16 ? ? 109.69 106.00 3.69 0.60 N 126 6 C4 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 124.04 119.00 5.04 0.60 N 127 6 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 115.35 122.90 -7.55 0.60 N 128 6 "O4'" B DT 17 ? ? "C4'" B DT 17 ? ? "C3'" B DT 17 ? ? 109.80 106.00 3.80 0.60 N 129 6 C4 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 122.64 119.00 3.64 0.60 N 130 6 C6 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 116.72 122.90 -6.18 0.60 N 131 6 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 118.74 122.90 -4.16 0.60 N 132 6 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 113.02 108.30 4.72 0.30 N 133 6 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 111.97 108.30 3.67 0.30 N 134 6 N3 B DG 20 ? ? C4 B DG 20 ? ? C5 B DG 20 ? ? 125.52 128.60 -3.08 0.50 N 135 6 "O4'" B DG 21 ? ? "C1'" B DG 21 ? ? N9 B DG 21 ? ? 110.19 108.30 1.89 0.30 N 136 6 N3 B DG 22 ? ? C2 B DG 22 ? ? N2 B DG 22 ? ? 114.91 119.90 -4.99 0.70 N 137 7 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 112.50 108.30 4.20 0.30 N 138 7 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.62 108.30 5.32 0.30 N 139 7 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.17 108.30 3.87 0.30 N 140 7 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 112.09 108.30 3.79 0.30 N 141 7 C4 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 123.05 119.00 4.05 0.60 N 142 7 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 116.43 122.90 -6.47 0.60 N 143 7 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 110.25 108.30 1.95 0.30 N 144 7 N3 A DT 7 ? ? C2 A DT 7 ? ? O2 A DT 7 ? ? 118.48 122.30 -3.82 0.60 N 145 7 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 117.96 122.90 -4.94 0.60 N 146 7 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 113.83 108.30 5.53 0.30 N 147 7 "C4'" A DG 10 ? ? "C3'" A DG 10 ? ? "C2'" A DG 10 ? ? 97.09 102.20 -5.11 0.70 N 148 7 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 114.37 108.30 6.07 0.30 N 149 7 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 103.46 108.00 -4.54 0.70 N 150 7 "O4'" B DT 16 ? ? "C4'" B DT 16 ? ? "C3'" B DT 16 ? ? 109.77 106.00 3.77 0.60 N 151 7 C4 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 123.88 119.00 4.88 0.60 N 152 7 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 116.32 122.90 -6.58 0.60 N 153 7 "O4'" B DT 17 ? ? "C4'" B DT 17 ? ? "C3'" B DT 17 ? ? 110.13 106.00 4.13 0.60 N 154 7 C6 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 117.29 122.90 -5.61 0.60 N 155 7 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 117.42 122.90 -5.48 0.60 N 156 7 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 113.37 108.30 5.07 0.30 N 157 7 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 110.26 108.30 1.96 0.30 N 158 7 "O4'" B DG 21 ? ? "C1'" B DG 21 ? ? N9 B DG 21 ? ? 110.97 108.30 2.67 0.30 N 159 7 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 110.76 108.30 2.46 0.30 N 160 8 "O4'" A DG 1 ? ? "C4'" A DG 1 ? ? "C3'" A DG 1 ? ? 109.76 106.00 3.76 0.60 N 161 8 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 114.83 108.30 6.53 0.30 N 162 8 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 113.86 108.30 5.56 0.30 N 163 8 C4 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 123.47 119.00 4.47 0.60 N 164 8 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 115.83 122.90 -7.07 0.60 N 165 8 "C5'" A DT 6 ? ? "C4'" A DT 6 ? ? "C3'" A DT 6 ? ? 124.13 115.70 8.43 1.20 N 166 8 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.17 108.30 2.87 0.30 N 167 8 N3 A DT 7 ? ? C2 A DT 7 ? ? O2 A DT 7 ? ? 118.53 122.30 -3.77 0.60 N 168 8 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 118.61 122.90 -4.29 0.60 N 169 8 "C4'" A DG 10 ? ? "C3'" A DG 10 ? ? "C2'" A DG 10 ? ? 96.43 102.20 -5.77 0.70 N 170 8 N3 A DG 10 ? ? C4 A DG 10 ? ? C5 A DG 10 ? ? 125.52 128.60 -3.08 0.50 N 171 8 "C3'" B DG 12 ? ? "C2'" B DG 12 ? ? "C1'" B DG 12 ? ? 97.45 102.40 -4.95 0.80 N 172 8 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 116.81 108.30 8.51 0.30 N 173 8 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 111.07 108.30 2.77 0.30 N 174 8 C4 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 124.19 119.00 5.19 0.60 N 175 8 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 115.13 122.90 -7.77 0.60 N 176 8 C4 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 122.92 119.00 3.92 0.60 N 177 8 C6 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 116.10 122.90 -6.80 0.60 N 178 8 "O4'" B DT 18 ? ? "C1'" B DT 18 ? ? N1 B DT 18 ? ? 111.55 108.30 3.25 0.30 N 179 8 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 117.74 122.90 -5.16 0.60 N 180 8 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 112.26 108.30 3.96 0.30 N 181 8 C6 B DT 19 ? ? C5 B DT 19 ? ? C7 B DT 19 ? ? 119.29 122.90 -3.61 0.60 N 182 8 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 110.92 108.30 2.62 0.30 N 183 8 N3 B DG 20 ? ? C4 B DG 20 ? ? C5 B DG 20 ? ? 125.54 128.60 -3.06 0.50 N 184 8 "O4'" B DG 21 ? ? "C1'" B DG 21 ? ? N9 B DG 21 ? ? 110.63 108.30 2.33 0.30 N 185 8 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 110.43 108.30 2.13 0.30 N 186 8 N3 B DG 22 ? ? C2 B DG 22 ? ? N2 B DG 22 ? ? 115.48 119.90 -4.42 0.70 N 187 9 "O4'" A DG 1 ? ? "C4'" A DG 1 ? ? "C3'" A DG 1 ? ? 109.63 106.00 3.63 0.60 N 188 9 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.32 108.30 3.02 0.30 N 189 9 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.54 108.30 5.24 0.30 N 190 9 "C3'" A DG 3 ? ? "C2'" A DG 3 ? ? "C1'" A DG 3 ? ? 96.93 102.40 -5.47 0.80 N 191 9 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.35 108.30 4.05 0.30 N 192 9 "C5'" A DG 4 ? ? "C4'" A DG 4 ? ? "O4'" A DG 4 ? ? 118.38 109.80 8.58 1.10 N 193 9 N1 A DG 4 ? ? C6 A DG 4 ? ? O6 A DG 4 ? ? 115.61 119.90 -4.29 0.60 N 194 9 C4 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 124.53 119.00 5.53 0.60 N 195 9 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 114.98 122.90 -7.92 0.60 N 196 9 N3 A DT 7 ? ? C2 A DT 7 ? ? O2 A DT 7 ? ? 118.42 122.30 -3.88 0.60 N 197 9 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 118.39 122.90 -4.51 0.60 N 198 9 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.59 108.30 4.29 0.30 N 199 9 "C4'" A DG 10 ? ? "C3'" A DG 10 ? ? "C2'" A DG 10 ? ? 96.64 102.20 -5.56 0.70 N 200 9 C8 A DG 10 ? ? N9 A DG 10 ? ? C4 A DG 10 ? ? 103.93 106.40 -2.47 0.40 N 201 9 N3 A DG 10 ? ? C2 A DG 10 ? ? N2 A DG 10 ? ? 115.43 119.90 -4.47 0.70 N 202 9 "C3'" A DG 11 ? ? "C2'" A DG 11 ? ? "C1'" A DG 11 ? ? 97.42 102.40 -4.98 0.80 N 203 9 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 113.52 108.30 5.22 0.30 N 204 9 C4 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 123.36 119.00 4.36 0.60 N 205 9 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 115.95 122.90 -6.95 0.60 N 206 9 C6 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 116.86 122.90 -6.04 0.60 N 207 9 "O4'" B DT 18 ? ? "C1'" B DT 18 ? ? N1 B DT 18 ? ? 111.39 108.30 3.09 0.30 N 208 9 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 118.62 122.90 -4.28 0.60 N 209 9 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 111.32 108.30 3.02 0.30 N 210 9 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 110.80 108.30 2.50 0.30 N 211 9 "O4'" B DG 21 ? ? "C1'" B DG 21 ? ? N9 B DG 21 ? ? 110.22 108.30 1.92 0.30 N 212 9 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 111.02 108.30 2.72 0.30 N 213 10 "O4'" A DG 1 ? ? "C4'" A DG 1 ? ? "C3'" A DG 1 ? ? 109.71 106.00 3.71 0.60 N 214 10 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 112.47 108.30 4.17 0.30 N 215 10 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.81 108.30 4.51 0.30 N 216 10 "C3'" A DG 3 ? ? "C2'" A DG 3 ? ? "C1'" A DG 3 ? ? 97.48 102.40 -4.92 0.80 N 217 10 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.69 108.30 4.39 0.30 N 218 10 C4 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 123.26 119.00 4.26 0.60 N 219 10 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 115.74 122.90 -7.16 0.60 N 220 10 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 110.77 108.30 2.47 0.30 N 221 10 N3 A DT 7 ? ? C2 A DT 7 ? ? O2 A DT 7 ? ? 118.16 122.30 -4.14 0.60 N 222 10 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 118.51 122.90 -4.39 0.60 N 223 10 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.81 108.30 3.51 0.30 N 224 10 N3 A DG 9 ? ? C2 A DG 9 ? ? N2 A DG 9 ? ? 115.10 119.90 -4.80 0.70 N 225 10 "C4'" A DG 10 ? ? "C3'" A DG 10 ? ? "C2'" A DG 10 ? ? 96.83 102.20 -5.37 0.70 N 226 10 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 110.19 108.30 1.89 0.30 N 227 10 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 113.20 108.30 4.90 0.30 N 228 10 C4 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 124.15 119.00 5.15 0.60 N 229 10 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 115.48 122.90 -7.42 0.60 N 230 10 C4 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 123.10 119.00 4.10 0.60 N 231 10 C6 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 116.55 122.90 -6.35 0.60 N 232 10 "O4'" B DT 18 ? ? "C1'" B DT 18 ? ? N1 B DT 18 ? ? 111.88 108.30 3.58 0.30 N 233 10 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 117.71 122.90 -5.19 0.60 N 234 10 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 111.63 108.30 3.33 0.30 N 235 10 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 112.05 108.30 3.75 0.30 N 236 10 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 111.47 108.30 3.17 0.30 N 237 10 N3 B DG 22 ? ? C2 B DG 22 ? ? N2 B DG 22 ? ? 115.11 119.90 -4.79 0.70 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DT A 5 ? ? 0.079 'SIDE CHAIN' 2 1 DT A 7 ? ? 0.087 'SIDE CHAIN' 3 1 DT B 17 ? ? 0.077 'SIDE CHAIN' 4 2 DT A 5 ? ? 0.081 'SIDE CHAIN' 5 2 DT A 8 ? ? 0.080 'SIDE CHAIN' 6 2 DG A 9 ? ? 0.105 'SIDE CHAIN' 7 2 DG A 11 ? ? 0.067 'SIDE CHAIN' 8 2 DG B 12 ? ? 0.079 'SIDE CHAIN' 9 2 DG B 13 ? ? 0.071 'SIDE CHAIN' 10 2 DT B 17 ? ? 0.094 'SIDE CHAIN' 11 3 DG A 3 ? ? 0.049 'SIDE CHAIN' 12 3 DT A 7 ? ? 0.079 'SIDE CHAIN' 13 3 DG A 9 ? ? 0.066 'SIDE CHAIN' 14 3 DG B 12 ? ? 0.064 'SIDE CHAIN' 15 4 DT A 5 ? ? 0.063 'SIDE CHAIN' 16 4 DT B 16 ? ? 0.074 'SIDE CHAIN' 17 4 DT B 17 ? ? 0.085 'SIDE CHAIN' 18 5 DT A 5 ? ? 0.087 'SIDE CHAIN' 19 5 DT A 7 ? ? 0.074 'SIDE CHAIN' 20 5 DG A 9 ? ? 0.050 'SIDE CHAIN' 21 5 DG A 11 ? ? 0.056 'SIDE CHAIN' 22 5 DG B 12 ? ? 0.052 'SIDE CHAIN' 23 5 DT B 19 ? ? 0.064 'SIDE CHAIN' 24 6 DT A 7 ? ? 0.082 'SIDE CHAIN' 25 6 DG A 9 ? ? 0.063 'SIDE CHAIN' 26 6 DG B 12 ? ? 0.052 'SIDE CHAIN' 27 6 DT B 17 ? ? 0.072 'SIDE CHAIN' 28 7 DT A 5 ? ? 0.073 'SIDE CHAIN' 29 7 DT A 7 ? ? 0.094 'SIDE CHAIN' 30 8 DT A 7 ? ? 0.173 'SIDE CHAIN' 31 9 DT B 17 ? ? 0.071 'SIDE CHAIN' 32 10 DT A 5 ? ? 0.063 'SIDE CHAIN' 33 10 DG A 9 ? ? 0.061 'SIDE CHAIN' 34 10 DG B 12 ? ? 0.079 'SIDE CHAIN' 35 10 DT B 17 ? ? 0.078 'SIDE CHAIN' # _ndb_struct_conf_na.entry_id 1LVS _ndb_struct_conf_na.feature 'quadruple helix' #