HEADER TRANSFERASE 14-JUN-02 1M0U TITLE CRYSTAL STRUCTURE OF THE DROSOPHILA GLUTATHIONE S-TRANSFERASE-2 IN TITLE 2 COMPLEX WITH GLUTATHIONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GST2 GENE PRODUCT; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GLUTATHIONE S-TRANSFERASE-2; COMPND 5 EC: 2.5.1.18; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-3A KEYWDS GST, FLIGHT MUSCLE PROTEIN, SIGMA, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR B.AGIANIAN,P.A.TUCKER,A.SCHOUTEN,K.LEONARD,B.BULLARD,P.GROS REVDAT 4 14-FEB-24 1M0U 1 REMARK REVDAT 3 21-MAR-12 1M0U 1 HET VERSN REVDAT 2 24-FEB-09 1M0U 1 VERSN REVDAT 1 11-FEB-03 1M0U 0 JRNL AUTH B.AGIANIAN,P.A.TUCKER,A.SCHOUTEN,K.LEONARD,B.BULLARD,P.GROS JRNL TITL STRUCTURE OF A DROSOPHILA SIGMA CLASS GLUTATHIONE JRNL TITL 2 S-TRANSFERASE REVEALS A NOVEL ACTIVE SITE TOPOGRAPHY SUITED JRNL TITL 3 FOR LIPID PEROXIDATION PRODUCTS JRNL REF J.MOL.BIOL. V. 326 151 2003 JRNL REFN ISSN 0022-2836 JRNL PMID 12547198 JRNL DOI 10.1016/S0022-2836(02)01327-X REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.P.SINGH,J.A.CORONELLA,H.BENES,B.J.COCHRANE,P.ZIMNIAK REMARK 1 TITL CATALYTIC FUNCTION OF DROSOPHILA MELANOGASTER GLUTATHIONE REMARK 1 TITL 2 S-TRANSFERASE DMGSTS1-1 (GST-2) IN CONJUCTION OF LIPID REMARK 1 TITL 3 PEROXIDATION END PRODUCTS REMARK 1 REF EUR.J.BIOCHEM. V. 268 2912 2001 REMARK 1 REFN ISSN 0014-2956 REMARK 1 DOI 10.1046/J.1432-1327.2001.02179.X REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.19 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 70.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 56042 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.800 REMARK 3 FREE R VALUE TEST SET COUNT : 6116 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4084 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 485 REMARK 3 BIN FREE R VALUE : 0.3110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3280 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 304 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.11000 REMARK 3 B22 (A**2) : 0.11000 REMARK 3 B33 (A**2) : -0.17000 REMARK 3 B12 (A**2) : 0.06000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.114 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.107 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.071 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.202 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3387 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4606 ; 1.192 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 404 ; 4.794 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 514 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2544 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1647 ; 0.206 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 278 ; 0.116 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 39 ; 0.195 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 16 ; 0.212 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2032 ; 0.743 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3306 ; 1.398 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1355 ; 1.999 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1300 ; 3.330 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1M0U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JUN-02. REMARK 100 THE DEPOSITION ID IS D_1000016457. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-FEB-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62202 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 76.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03900 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.23800 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIRAS REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, SODIUM PHOSPHATE, PH REMARK 280 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.92967 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 87.85933 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 87.85933 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 43.92967 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ASYMMETRIC UNIT CONTAINS THE REMARK 300 BIOLOGICAL DIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ASP A 3 REMARK 465 GLU A 4 REMARK 465 ALA A 5 REMARK 465 GLN A 6 REMARK 465 ALA A 7 REMARK 465 PRO A 8 REMARK 465 PRO A 9 REMARK 465 ALA A 10 REMARK 465 GLU A 11 REMARK 465 GLY A 12 REMARK 465 ALA A 13 REMARK 465 PRO A 14 REMARK 465 PRO A 15 REMARK 465 ALA A 16 REMARK 465 GLU A 17 REMARK 465 GLY A 18 REMARK 465 GLU A 19 REMARK 465 ALA A 20 REMARK 465 PRO A 21 REMARK 465 PRO A 22 REMARK 465 PRO A 23 REMARK 465 ALA A 24 REMARK 465 GLU A 25 REMARK 465 GLY A 26 REMARK 465 ALA A 27 REMARK 465 GLU A 28 REMARK 465 GLY A 29 REMARK 465 ALA A 30 REMARK 465 VAL A 31 REMARK 465 GLU A 32 REMARK 465 GLY A 33 REMARK 465 GLY A 34 REMARK 465 GLU A 35 REMARK 465 ALA A 36 REMARK 465 ALA A 37 REMARK 465 PRO A 38 REMARK 465 PRO A 39 REMARK 465 ALA A 40 REMARK 465 GLU A 41 REMARK 465 PRO A 42 REMARK 465 ALA A 43 REMARK 465 GLU A 44 REMARK 465 PRO A 45 REMARK 465 ILE A 46 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ASP B 3 REMARK 465 GLU B 4 REMARK 465 ALA B 5 REMARK 465 GLN B 6 REMARK 465 ALA B 7 REMARK 465 PRO B 8 REMARK 465 PRO B 9 REMARK 465 ALA B 10 REMARK 465 GLU B 11 REMARK 465 GLY B 12 REMARK 465 ALA B 13 REMARK 465 PRO B 14 REMARK 465 PRO B 15 REMARK 465 ALA B 16 REMARK 465 GLU B 17 REMARK 465 GLY B 18 REMARK 465 GLU B 19 REMARK 465 ALA B 20 REMARK 465 PRO B 21 REMARK 465 PRO B 22 REMARK 465 PRO B 23 REMARK 465 ALA B 24 REMARK 465 GLU B 25 REMARK 465 GLY B 26 REMARK 465 ALA B 27 REMARK 465 GLU B 28 REMARK 465 GLY B 29 REMARK 465 ALA B 30 REMARK 465 VAL B 31 REMARK 465 GLU B 32 REMARK 465 GLY B 33 REMARK 465 GLY B 34 REMARK 465 GLU B 35 REMARK 465 ALA B 36 REMARK 465 ALA B 37 REMARK 465 PRO B 38 REMARK 465 PRO B 39 REMARK 465 ALA B 40 REMARK 465 GLU B 41 REMARK 465 PRO B 42 REMARK 465 ALA B 43 REMARK 465 GLU B 44 REMARK 465 PRO B 45 REMARK 465 ILE B 46 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 154 CB CG CD OE1 OE2 REMARK 470 GLU B 154 CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 58 -74.76 -78.09 REMARK 500 ALA A 59 -126.23 35.03 REMARK 500 MET A 94 15.67 52.30 REMARK 500 GLN A 109 94.81 81.67 REMARK 500 CYS A 124 -165.38 -103.12 REMARK 500 PRO A 155 -71.00 -82.48 REMARK 500 GLU A 170 -53.71 -121.27 REMARK 500 LYS B 58 -71.58 -81.20 REMARK 500 ALA B 59 -126.02 35.61 REMARK 500 MET B 94 13.06 57.10 REMARK 500 GLN B 109 92.38 81.27 REMARK 500 CYS B 124 -154.64 -103.07 REMARK 500 GLU B 154 -96.28 -74.09 REMARK 500 GLU B 158 35.10 -96.23 REMARK 500 LEU B 192 17.57 57.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH A 500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1PD2 RELATED DB: PDB REMARK 900 1PD2 IS THE CRYSTAL STRUCTURE OF HEMATOPOIETIC PROSTAGLANDIN D REMARK 900 SYNTHASE REMARK 900 RELATED ID: 1B48 RELATED DB: PDB REMARK 900 1B48 IS THE CRYSTAL STRUCTURE OF MURINE GSTA4-4 REMARK 900 RELATED ID: 1GUL RELATED DB: PDB REMARK 900 1GUL IS THE CRYSTAL STRUCTURE OF HUMAN GLUTATHIONE TRANSFERASE A4-4 DBREF 1M0U A 1 249 UNP P41043 GST1_DROME 1 249 DBREF 1M0U B 1 249 UNP P41043 GST1_DROME 1 249 SEQRES 1 A 249 MET ALA ASP GLU ALA GLN ALA PRO PRO ALA GLU GLY ALA SEQRES 2 A 249 PRO PRO ALA GLU GLY GLU ALA PRO PRO PRO ALA GLU GLY SEQRES 3 A 249 ALA GLU GLY ALA VAL GLU GLY GLY GLU ALA ALA PRO PRO SEQRES 4 A 249 ALA GLU PRO ALA GLU PRO ILE LYS HIS SER TYR THR LEU SEQRES 5 A 249 PHE TYR PHE ASN VAL LYS ALA LEU ALA GLU PRO LEU ARG SEQRES 6 A 249 TYR LEU PHE ALA TYR GLY ASN GLN GLU TYR GLU ASP VAL SEQRES 7 A 249 ARG VAL THR ARG ASP GLU TRP PRO ALA LEU LYS PRO THR SEQRES 8 A 249 MET PRO MET GLY GLN MET PRO VAL LEU GLU VAL ASP GLY SEQRES 9 A 249 LYS ARG VAL HIS GLN SER ILE SER MET ALA ARG PHE LEU SEQRES 10 A 249 ALA LYS THR VAL GLY LEU CYS GLY ALA THR PRO TRP GLU SEQRES 11 A 249 ASP LEU GLN ILE ASP ILE VAL VAL ASP THR ILE ASN ASP SEQRES 12 A 249 PHE ARG LEU LYS ILE ALA VAL VAL SER TYR GLU PRO GLU SEQRES 13 A 249 ASP GLU ILE LYS GLU LYS LYS LEU VAL THR LEU ASN ALA SEQRES 14 A 249 GLU VAL ILE PRO PHE TYR LEU GLU LYS LEU GLU GLN THR SEQRES 15 A 249 VAL LYS ASP ASN ASP GLY HIS LEU ALA LEU GLY LYS LEU SEQRES 16 A 249 THR TRP ALA ASP VAL TYR PHE ALA GLY ILE THR ASP TYR SEQRES 17 A 249 MET ASN TYR MET VAL LYS ARG ASP LEU LEU GLU PRO TYR SEQRES 18 A 249 PRO ALA LEU ARG GLY VAL VAL ASP ALA VAL ASN ALA LEU SEQRES 19 A 249 GLU PRO ILE LYS ALA TRP ILE GLU LYS ARG PRO VAL THR SEQRES 20 A 249 GLU VAL SEQRES 1 B 249 MET ALA ASP GLU ALA GLN ALA PRO PRO ALA GLU GLY ALA SEQRES 2 B 249 PRO PRO ALA GLU GLY GLU ALA PRO PRO PRO ALA GLU GLY SEQRES 3 B 249 ALA GLU GLY ALA VAL GLU GLY GLY GLU ALA ALA PRO PRO SEQRES 4 B 249 ALA GLU PRO ALA GLU PRO ILE LYS HIS SER TYR THR LEU SEQRES 5 B 249 PHE TYR PHE ASN VAL LYS ALA LEU ALA GLU PRO LEU ARG SEQRES 6 B 249 TYR LEU PHE ALA TYR GLY ASN GLN GLU TYR GLU ASP VAL SEQRES 7 B 249 ARG VAL THR ARG ASP GLU TRP PRO ALA LEU LYS PRO THR SEQRES 8 B 249 MET PRO MET GLY GLN MET PRO VAL LEU GLU VAL ASP GLY SEQRES 9 B 249 LYS ARG VAL HIS GLN SER ILE SER MET ALA ARG PHE LEU SEQRES 10 B 249 ALA LYS THR VAL GLY LEU CYS GLY ALA THR PRO TRP GLU SEQRES 11 B 249 ASP LEU GLN ILE ASP ILE VAL VAL ASP THR ILE ASN ASP SEQRES 12 B 249 PHE ARG LEU LYS ILE ALA VAL VAL SER TYR GLU PRO GLU SEQRES 13 B 249 ASP GLU ILE LYS GLU LYS LYS LEU VAL THR LEU ASN ALA SEQRES 14 B 249 GLU VAL ILE PRO PHE TYR LEU GLU LYS LEU GLU GLN THR SEQRES 15 B 249 VAL LYS ASP ASN ASP GLY HIS LEU ALA LEU GLY LYS LEU SEQRES 16 B 249 THR TRP ALA ASP VAL TYR PHE ALA GLY ILE THR ASP TYR SEQRES 17 B 249 MET ASN TYR MET VAL LYS ARG ASP LEU LEU GLU PRO TYR SEQRES 18 B 249 PRO ALA LEU ARG GLY VAL VAL ASP ALA VAL ASN ALA LEU SEQRES 19 B 249 GLU PRO ILE LYS ALA TRP ILE GLU LYS ARG PRO VAL THR SEQRES 20 B 249 GLU VAL HET SO4 A 402 5 HET GSH A 500 20 HET SO4 B 401 5 HETNAM SO4 SULFATE ION HETNAM GSH GLUTATHIONE FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 GSH C10 H17 N3 O6 S FORMUL 6 HOH *304(H2 O) HELIX 1 1 LYS A 58 LEU A 60 5 3 HELIX 2 2 ALA A 61 ASN A 72 1 12 HELIX 3 3 GLU A 84 LYS A 89 1 6 HELIX 4 4 PRO A 90 GLN A 96 5 7 HELIX 5 5 GLN A 109 GLY A 122 1 14 HELIX 6 6 THR A 127 TYR A 153 1 27 HELIX 7 7 GLU A 156 GLU A 170 1 15 HELIX 8 8 GLU A 170 ASN A 186 1 17 HELIX 9 9 THR A 196 LYS A 214 1 19 HELIX 10 10 TYR A 221 ALA A 233 1 13 HELIX 11 11 LEU A 234 ARG A 244 1 11 HELIX 12 12 LYS B 58 LEU B 60 5 3 HELIX 13 13 ALA B 61 GLY B 71 1 11 HELIX 14 14 GLU B 84 LYS B 89 1 6 HELIX 15 15 PRO B 90 GLN B 96 5 7 HELIX 16 16 GLN B 109 VAL B 121 1 13 HELIX 17 17 THR B 127 TYR B 153 1 27 HELIX 18 18 ILE B 159 GLU B 170 1 12 HELIX 19 19 GLU B 170 ASN B 186 1 17 HELIX 20 20 THR B 196 LYS B 214 1 19 HELIX 21 21 TYR B 221 LEU B 234 1 14 HELIX 22 22 LEU B 234 ARG B 244 1 11 SHEET 1 A 4 GLU A 76 VAL A 80 0 SHEET 2 A 4 TYR A 50 PHE A 55 1 N LEU A 52 O GLU A 76 SHEET 3 A 4 VAL A 99 VAL A 102 -1 O VAL A 99 N PHE A 53 SHEET 4 A 4 LYS A 105 HIS A 108 -1 O VAL A 107 N LEU A 100 SHEET 1 B 4 GLU B 76 VAL B 80 0 SHEET 2 B 4 TYR B 50 PHE B 55 1 N LEU B 52 O GLU B 76 SHEET 3 B 4 VAL B 99 VAL B 102 -1 O VAL B 99 N PHE B 53 SHEET 4 B 4 LYS B 105 HIS B 108 -1 O LYS B 105 N VAL B 102 CISPEP 1 MET A 97 PRO A 98 0 0.88 CISPEP 2 MET B 97 PRO B 98 0 2.90 SITE 1 AC1 4 ARG B 244 HOH B 445 HOH B 452 HOH B 533 SITE 1 AC2 5 ILE A 241 ARG A 244 HOH A 560 HOH A 574 SITE 2 AC2 5 HOH A 625 SITE 1 AC3 9 TYR A 54 PHE A 55 LEU A 60 TRP A 85 SITE 2 AC3 9 GLN A 96 MET A 97 GLN A 109 SER A 110 SITE 3 AC3 9 HOH A 522 CRYST1 89.723 89.723 131.789 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011145 0.006435 0.000000 0.00000 SCALE2 0.000000 0.012870 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007588 0.00000