data_1M24 # _entry.id 1M24 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1M24 pdb_00001m24 10.2210/pdb1m24/pdb RCSB RCSB016502 ? ? WWPDB D_1000016502 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-11-06 2 'Structure model' 1 1 2011-06-14 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-07-27 5 'Structure model' 1 4 2012-09-05 6 'Structure model' 1 5 2012-12-12 7 'Structure model' 1 6 2017-10-11 8 'Structure model' 2 0 2023-11-15 9 'Structure model' 2 1 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Non-polymer description' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' 'Derived calculations' 9 6 'Structure model' Other 10 7 'Structure model' 'Refinement description' 11 8 'Structure model' 'Atomic model' 12 8 'Structure model' 'Data collection' 13 8 'Structure model' 'Database references' 14 8 'Structure model' 'Derived calculations' 15 9 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 7 'Structure model' software 2 8 'Structure model' atom_site 3 8 'Structure model' chem_comp_atom 4 8 'Structure model' chem_comp_bond 5 8 'Structure model' database_2 6 8 'Structure model' struct_conn 7 8 'Structure model' struct_site 8 9 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 8 'Structure model' '_atom_site.auth_atom_id' 2 8 'Structure model' '_atom_site.label_atom_id' 3 8 'Structure model' '_database_2.pdbx_DOI' 4 8 'Structure model' '_database_2.pdbx_database_accession' 5 8 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 8 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 8 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 8 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1M24 _pdbx_database_status.recvd_initial_deposition_date 2002-06-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1R9U unspecified 'SOLUTION STRUCTURE OF THE PEPTAIBOL ZERVAMICIN IIB IN METHANO' PDB 1DLZ unspecified 'SOLUTION STRUCTURE OF THE PEPTIABOL ZERVAMICIN IIB' PDB 1IH9 unspecified 'SOLUTION STRUCTURE OF THE PEPTAIBOL ZERVAMICIN IIB BOUND TO DPC MICELLES' PDB 1GQ0 unspecified 'SOLUTION STRUCTURE OF THE PEPTAIBOL ANTIAMOEBIN I' PDB 1JOH unspecified 'CRYSTAL STRUCTURE OF THE PEPTAIBOL ANTIAMOEBIN I' PDB 1AMT unspecified 'CRYSTAL STRUCTURE OF THE PEPTAIBOL ALAMETHICIN' PDB 1EE7 unspecified 'SOLUTION STRUCTURE OF THE PEPTAIBOL CHRYSOSPERMIN C BOUND TO DPC MICELLES' PDB 1OB7 unspecified 'CRYSTAL STRUCTURE OF THE PEPTAIBOL CEPHAIBOL C' PDB 1OB6 unspecified 'CRYSTAL STRUCTURE OF THE PEPTAIBOL CEPHAIBOL B' PDB 1OB4 unspecified 'CRYSTAL STRUCTURE OF THE PEPTAIBOL CEPHAIBOL A' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chugh, J.K.' 1 'Brueckner, H.' 2 'Wallace, B.A.' 3 # _citation.id primary _citation.title 'Model for a Helical Bundle Channel Based on the High-Resolution Crystal Structure of Trichotoxin_A50E' _citation.journal_abbrev Biochemistry _citation.journal_volume 41 _citation.page_first 12934 _citation.page_last ? _citation.year 2002 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12390019 _citation.pdbx_database_id_DOI 10.1021/BI026150Z # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chugh, J.K.' 1 ? primary 'Brueckner, H.' 2 ? primary 'Wallace, B.A.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat TRICHOTOXIN_A50E 1674.039 2 ? ? ? ? 2 non-polymer syn ACETONITRILE 41.052 2 ? ? ? ? 3 water nat water 18.015 5 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ACE)(AIB)G(AIB)L(AIB)Q(AIB)(AIB)(AIB)AA(AIB)PL(AIB)(AIB)Q(VOL)' _entity_poly.pdbx_seq_one_letter_code_can XAGALAQAAAAAAPLAAQX _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ACETONITRILE CCN 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 AIB n 1 3 GLY n 1 4 AIB n 1 5 LEU n 1 6 AIB n 1 7 GLN n 1 8 AIB n 1 9 AIB n 1 10 AIB n 1 11 ALA n 1 12 ALA n 1 13 AIB n 1 14 PRO n 1 15 LEU n 1 16 AIB n 1 17 AIB n 1 18 GLN n 1 19 VOL n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'TRICHODERMA VIRIDE' _entity_src_nat.pdbx_ncbi_taxonomy_id 5547 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain 'NRRL 5242' _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 AIB 'L-peptide linking' n 'ALPHA-AMINOISOBUTYRIC ACID' ? 'C4 H9 N O2' 103.120 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 CCN non-polymer . ACETONITRILE ? 'C2 H3 N' 41.052 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 VOL 'L-peptide linking' . L-VALINOL ? 'C5 H13 N O' 103.163 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 0 0 ACE ACE A . n A 1 2 AIB 2 1 1 AIB AIB A . n A 1 3 GLY 3 2 2 GLY GLY A . n A 1 4 AIB 4 3 3 AIB AIB A . n A 1 5 LEU 5 4 4 LEU LEU A . n A 1 6 AIB 6 5 5 AIB AIB A . n A 1 7 GLN 7 6 6 GLN GLN A . n A 1 8 AIB 8 7 7 AIB AIB A . n A 1 9 AIB 9 8 8 AIB AIB A . n A 1 10 AIB 10 9 9 AIB AIB A . n A 1 11 ALA 11 10 10 ALA ALA A . n A 1 12 ALA 12 11 11 ALA ALA A . n A 1 13 AIB 13 12 12 AIB AIB A . n A 1 14 PRO 14 13 13 PRO PRO A . n A 1 15 LEU 15 14 14 LEU LEU A . n A 1 16 AIB 16 15 15 AIB AIB A . n A 1 17 AIB 17 16 16 AIB AIB A . n A 1 18 GLN 18 17 17 GLN GLN A . n A 1 19 VOL 19 18 18 VOL VOL A . n B 1 1 ACE 1 0 0 ACE ACE B . n B 1 2 AIB 2 1 1 AIB AIB B . n B 1 3 GLY 3 2 2 GLY GLY B . n B 1 4 AIB 4 3 3 AIB AIB B . n B 1 5 LEU 5 4 4 LEU LEU B . n B 1 6 AIB 6 5 5 AIB AIB B . n B 1 7 GLN 7 6 6 GLN GLN B . n B 1 8 AIB 8 7 7 AIB AIB B . n B 1 9 AIB 9 8 8 AIB AIB B . n B 1 10 AIB 10 9 9 AIB AIB B . n B 1 11 ALA 11 10 10 ALA ALA B . n B 1 12 ALA 12 11 11 ALA ALA B . n B 1 13 AIB 13 12 12 AIB AIB B . n B 1 14 PRO 14 13 13 PRO PRO B . n B 1 15 LEU 15 14 14 LEU LEU B . n B 1 16 AIB 16 15 15 AIB AIB B . n B 1 17 AIB 17 16 16 AIB AIB B . n B 1 18 GLN 18 17 17 GLN GLN B . n B 1 19 VOL 19 18 18 VOL VOL B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CCN 1 19 19 CCN CCN A . D 2 CCN 1 19 19 CCN CCN B . E 3 HOH 1 2001 2001 HOH HOH A . E 3 HOH 2 2002 2002 HOH HOH A . F 3 HOH 1 2001 2001 HOH HOH B . F 3 HOH 2 2002 2002 HOH HOH B . F 3 HOH 3 2003 2003 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MOLREP phasing . ? 1 ARP/wARP 'model building' . ? 2 SHELXL-97 refinement . ? 3 SMART 'data reduction' 'V. 5.054 (BRUKER)' ? 4 # _cell.entry_id 1M24 _cell.length_a 9.490 _cell.length_b 16.850 _cell.length_c 31.680 _cell.angle_alpha 95.77 _cell.angle_beta 98.07 _cell.angle_gamma 99.45 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1M24 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1M24 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.30 _exptl_crystal.density_percent_sol 8.28 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'METHANOL:ACETONITRILE 1:10, EVAPORATION, RECRYSTALLIZATION, TEMPERATURE 268K' # _diffrn.id 1 _diffrn.ambient_temp 150 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2001-04-24 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SILICON 111' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.6883 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type SRS _diffrn_source.pdbx_synchrotron_site SRS _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 0.6883 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1M24 _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 10.000 _reflns.d_resolution_high 0.900 _reflns.number_obs 13427 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.05140 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.0300 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.790 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 0.90 _reflns_shell.d_res_low 0.95 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.26140 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.360 _reflns_shell.pdbx_redundancy 2.18 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1M24 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all 13427 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 0.90 _refine.ls_percent_reflns_obs 99.7 _refine.ls_R_factor_obs 0.075 _refine.ls_R_factor_all 0.076 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.092 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 688 _refine.ls_number_parameters 2244 _refine.ls_number_restraints 2814 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'USED WEIGHTED FULL MATRIX LEAST SQUARES PROCEDURE, NO RESTRAINTS USED' _refine.pdbx_starting_model 'MODEL OF HELICAL PEPTIDE, RESIDUES 1-13.' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 1M24 _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 0 _refine_analyze.occupancy_sum_hydrogen 278.00 _refine_analyze.occupancy_sum_non_hydrogen 249.00 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 238 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 5 _refine_hist.number_atoms_total 249 _refine_hist.d_res_high 0.90 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.026 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.026 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.026 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.101 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 1.186 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.006 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.030 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.091 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 1M24 _pdbx_refine.R_factor_all_no_cutoff 0.076 _pdbx_refine.R_factor_obs_no_cutoff 0.075 _pdbx_refine.free_R_factor_no_cutoff 0.092 _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5.100 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 688 _pdbx_refine.R_factor_all_4sig_cutoff 0.057 _pdbx_refine.R_factor_obs_4sig_cutoff 0.056 _pdbx_refine.free_R_factor_4sig_cutoff 0.072 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 5.000 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 508 _pdbx_refine.number_reflns_obs_4sig_cutoff 10153 # _database_PDB_matrix.entry_id 1M24 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1M24 _struct.title 'Trichotoxin_A50E, An Ion Channel-Forming Polypeptide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1M24 _struct_keywords.pdbx_keywords ANTIBIOTIC _struct_keywords.text 'TRICHOTOXIN, PEPTAIBOL, ANTIBACTERIAL, ANTIFUNGAL, ANTIBIOTIC' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_ref.id 1 _struct_ref.db_name NOR _struct_ref.db_code NOR01101 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession NOR01101 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1M24 A 1 ? 19 ? NOR01101 0 ? 18 ? 0 18 2 1 1M24 B 1 ? 19 ? NOR01101 0 ? 18 ? 0 18 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 820 ? 2 MORE -7 ? 2 'SSA (A^2)' 3660 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F 2 1 A,C,E 2 2 B,D,F # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 1_665 x+1,y+1,z 1.0000000000 0.0000000000 0.0000000000 6.7234516353 0.0000000000 1.0000000000 0.0000000000 16.6213329834 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 AIB A 2 ? GLN A 18 ? AIB A 1 GLN A 17 1 ? 17 HELX_P HELX_P2 2 AIB B 2 ? GLN B 18 ? AIB B 1 GLN B 17 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ACE 1 C ? ? ? 1_555 A AIB 2 N ? ? A ACE 0 A AIB 1 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? A AIB 2 C ? ? ? 1_555 A GLY 3 N ? ? A AIB 1 A GLY 2 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale3 covale both ? A GLY 3 C ? ? ? 1_555 A AIB 4 N ? ? A GLY 2 A AIB 3 1_555 ? ? ? ? ? ? ? 1.316 ? ? covale4 covale both ? A AIB 4 C ? ? ? 1_555 A LEU 5 N ? ? A AIB 3 A LEU 4 1_555 ? ? ? ? ? ? ? 1.353 ? ? covale5 covale both ? A LEU 5 C ? ? ? 1_555 A AIB 6 N ? ? A LEU 4 A AIB 5 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale6 covale both ? A AIB 6 C ? ? ? 1_555 A GLN 7 N ? ? A AIB 5 A GLN 6 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale7 covale both ? A GLN 7 C ? ? ? 1_555 A AIB 8 N ? ? A GLN 6 A AIB 7 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale8 covale both ? A AIB 8 C ? ? ? 1_555 A AIB 9 N ? ? A AIB 7 A AIB 8 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale9 covale both ? A AIB 9 C ? ? ? 1_555 A AIB 10 N ? ? A AIB 8 A AIB 9 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale10 covale both ? A AIB 10 C ? ? ? 1_555 A ALA 11 N ? ? A AIB 9 A ALA 10 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale11 covale both ? A ALA 12 C ? ? ? 1_555 A AIB 13 N ? ? A ALA 11 A AIB 12 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale12 covale both ? A AIB 13 C ? ? ? 1_555 A PRO 14 N ? ? A AIB 12 A PRO 13 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale13 covale both ? A LEU 15 C ? ? ? 1_555 A AIB 16 N ? ? A LEU 14 A AIB 15 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale14 covale both ? A AIB 16 C ? ? ? 1_555 A AIB 17 N ? ? A AIB 15 A AIB 16 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale15 covale both ? A AIB 17 C ? ? ? 1_555 A GLN 18 N ? ? A AIB 16 A GLN 17 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale16 covale both ? A GLN 18 C ? ? ? 1_555 A VOL 19 N ? ? A GLN 17 A VOL 18 1_555 ? ? ? ? ? ? ? 1.307 ? ? covale17 covale both ? B ACE 1 C ? ? ? 1_555 B AIB 2 N ? ? B ACE 0 B AIB 1 1_555 ? ? ? ? ? ? ? 1.268 ? ? covale18 covale both ? B AIB 2 C ? ? ? 1_555 B GLY 3 N ? ? B AIB 1 B GLY 2 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale19 covale both ? B GLY 3 C ? ? ? 1_555 B AIB 4 N ? ? B GLY 2 B AIB 3 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale20 covale both ? B AIB 4 C ? ? ? 1_555 B LEU 5 N ? ? B AIB 3 B LEU 4 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale21 covale both ? B LEU 5 C ? ? ? 1_555 B AIB 6 N ? ? B LEU 4 B AIB 5 1_555 ? ? ? ? ? ? ? 1.305 ? ? covale22 covale both ? B AIB 6 C ? ? ? 1_555 B GLN 7 N ? ? B AIB 5 B GLN 6 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale23 covale both ? B GLN 7 C ? ? ? 1_555 B AIB 8 N ? ? B GLN 6 B AIB 7 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale24 covale both ? B AIB 8 C ? ? ? 1_555 B AIB 9 N ? ? B AIB 7 B AIB 8 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale25 covale both ? B AIB 9 C ? ? ? 1_555 B AIB 10 N ? ? B AIB 8 B AIB 9 1_555 ? ? ? ? ? ? ? 1.309 ? ? covale26 covale both ? B AIB 10 C ? ? ? 1_555 B ALA 11 N ? ? B AIB 9 B ALA 10 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale27 covale both ? B ALA 12 C ? ? ? 1_555 B AIB 13 N ? ? B ALA 11 B AIB 12 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale28 covale both ? B AIB 13 C ? ? ? 1_555 B PRO 14 N ? ? B AIB 12 B PRO 13 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale29 covale both ? B LEU 15 C ? ? ? 1_555 B AIB 16 N ? ? B LEU 14 B AIB 15 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale30 covale both ? B AIB 16 C ? ? ? 1_555 B AIB 17 N ? ? B AIB 15 B AIB 16 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale31 covale both ? B AIB 17 C ? ? ? 1_555 B GLN 18 N ? ? B AIB 16 B GLN 17 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale32 covale both ? B GLN 18 C ? ? ? 1_555 B VOL 19 N ? ? B GLN 17 B VOL 18 1_555 ? ? ? ? ? ? ? 1.317 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CCN 19 ? 9 'BINDING SITE FOR RESIDUE CCN A 19' AC2 Software B CCN 19 ? 8 'BINDING SITE FOR RESIDUE CCN B 19' AC3 Software ? ? ? ? 30 'BINDING SITE FOR CHAIN A OF TRICHOTOXIN_A50E' AC4 Software ? ? ? ? 32 'BINDING SITE FOR CHAIN B OF TRICHOTOXIN_A50E' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 GLN A 7 ? GLN A 6 . ? 1_555 ? 2 AC1 9 ACE B 1 ? ACE B 0 . ? 1_656 ? 3 AC1 9 AIB B 2 ? AIB B 1 . ? 1_556 ? 4 AC1 9 LEU B 15 ? LEU B 14 . ? 1_555 ? 5 AC1 9 AIB B 16 ? AIB B 15 . ? 1_455 ? 6 AC1 9 AIB B 17 ? AIB B 16 . ? 1_455 ? 7 AC1 9 GLN B 18 ? GLN B 17 . ? 1_555 ? 8 AC1 9 VOL B 19 ? VOL B 18 . ? 1_455 ? 9 AC1 9 VOL B 19 ? VOL B 18 . ? 1_555 ? 10 AC2 8 AIB A 2 ? AIB A 1 . ? 1_454 ? 11 AC2 8 GLY A 3 ? GLY A 2 . ? 1_454 ? 12 AC2 8 GLN A 18 ? GLN A 17 . ? 1_555 ? 13 AC2 8 GLN A 18 ? GLN A 17 . ? 1_455 ? 14 AC2 8 HOH E . ? HOH A 2002 . ? 1_455 ? 15 AC2 8 AIB B 6 ? AIB B 5 . ? 1_555 ? 16 AC2 8 GLN B 7 ? GLN B 6 . ? 1_555 ? 17 AC2 8 GLN B 7 ? GLN B 6 . ? 1_655 ? 18 AC3 30 CCN C . ? CCN A 19 . ? 1_555 ? 19 AC3 30 HOH E . ? HOH A 2001 . ? 1_555 ? 20 AC3 30 HOH E . ? HOH A 2001 . ? 1_655 ? 21 AC3 30 HOH E . ? HOH A 2002 . ? 1_455 ? 22 AC3 30 HOH E . ? HOH A 2002 . ? 1_555 ? 23 AC3 30 ACE B 1 ? ACE B 0 . ? 1_656 ? 24 AC3 30 AIB B 2 ? AIB B 1 . ? 1_656 ? 25 AC3 30 AIB B 2 ? AIB B 1 . ? 1_666 ? 26 AC3 30 GLY B 3 ? GLY B 2 . ? 1_656 ? 27 AC3 30 AIB B 4 ? AIB B 3 . ? 1_656 ? 28 AC3 30 LEU B 5 ? LEU B 4 . ? 1_766 ? 29 AC3 30 GLN B 7 ? GLN B 6 . ? 1_656 ? 30 AC3 30 GLN B 7 ? GLN B 6 . ? 1_755 ? 31 AC3 30 GLN B 7 ? GLN B 6 . ? 1_655 ? 32 AC3 30 AIB B 10 ? AIB B 9 . ? 1_655 ? 33 AC3 30 ALA B 11 ? ALA B 10 . ? 1_655 ? 34 AC3 30 ALA B 12 ? ALA B 11 . ? 1_665 ? 35 AC3 30 AIB B 13 ? AIB B 12 . ? 1_555 ? 36 AC3 30 PRO B 14 ? PRO B 13 . ? 1_655 ? 37 AC3 30 PRO B 14 ? PRO B 13 . ? 1_555 ? 38 AC3 30 LEU B 15 ? LEU B 14 . ? 1_665 ? 39 AC3 30 AIB B 16 ? AIB B 15 . ? 1_565 ? 40 AC3 30 AIB B 17 ? AIB B 16 . ? 1_555 ? 41 AC3 30 GLN B 18 ? GLN B 17 . ? 1_555 ? 42 AC3 30 VOL B 19 ? VOL B 18 . ? 1_565 ? 43 AC3 30 CCN D . ? CCN B 19 . ? 1_555 ? 44 AC3 30 CCN D . ? CCN B 19 . ? 1_655 ? 45 AC3 30 CCN D . ? CCN B 19 . ? 1_656 ? 46 AC3 30 HOH F . ? HOH B 2003 . ? 1_555 ? 47 AC3 30 HOH F . ? HOH B 2003 . ? 1_655 ? 48 AC4 32 ACE A 1 ? ACE A 0 . ? 1_454 ? 49 AC4 32 AIB A 2 ? AIB A 1 . ? 1_344 ? 50 AC4 32 GLY A 3 ? GLY A 2 . ? 1_454 ? 51 AC4 32 AIB A 4 ? AIB A 3 . ? 1_454 ? 52 AC4 32 LEU A 5 ? LEU A 4 . ? 1_444 ? 53 AC4 32 GLN A 7 ? GLN A 6 . ? 1_454 ? 54 AC4 32 GLN A 7 ? GLN A 6 . ? 1_555 ? 55 AC4 32 AIB A 8 ? AIB A 7 . ? 1_545 ? 56 AC4 32 AIB A 9 ? AIB A 8 . ? 1_545 ? 57 AC4 32 AIB A 10 ? AIB A 9 . ? 1_555 ? 58 AC4 32 ALA A 11 ? ALA A 10 . ? 1_555 ? 59 AC4 32 ALA A 12 ? ALA A 11 . ? 1_445 ? 60 AC4 32 ALA A 12 ? ALA A 11 . ? 1_545 ? 61 AC4 32 AIB A 13 ? AIB A 12 . ? 1_455 ? 62 AC4 32 PRO A 14 ? PRO A 13 . ? 1_455 ? 63 AC4 32 PRO A 14 ? PRO A 13 . ? 1_555 ? 64 AC4 32 LEU A 15 ? LEU A 14 . ? 1_445 ? 65 AC4 32 LEU A 15 ? LEU A 14 . ? 1_545 ? 66 AC4 32 AIB A 17 ? AIB A 16 . ? 1_455 ? 67 AC4 32 GLN A 18 ? GLN A 17 . ? 1_455 ? 68 AC4 32 VOL A 19 ? VOL A 18 . ? 1_355 ? 69 AC4 32 CCN C . ? CCN A 19 . ? 1_555 ? 70 AC4 32 CCN C . ? CCN A 19 . ? 1_655 ? 71 AC4 32 CCN C . ? CCN A 19 . ? 1_454 ? 72 AC4 32 CCN C . ? CCN A 19 . ? 1_554 ? 73 AC4 32 CCN D . ? CCN B 19 . ? 1_455 ? 74 AC4 32 CCN D . ? CCN B 19 . ? 1_555 ? 75 AC4 32 HOH F . ? HOH B 2001 . ? 1_655 ? 76 AC4 32 HOH F . ? HOH B 2001 . ? 1_555 ? 77 AC4 32 HOH F . ? HOH B 2002 . ? 1_555 ? 78 AC4 32 HOH F . ? HOH B 2002 . ? 1_454 ? 79 AC4 32 HOH F . ? HOH B 2003 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 HH _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 VOL _pdbx_validate_close_contact.auth_seq_id_1 18 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 2002 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.55 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 HH2 _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 VOL _pdbx_validate_symm_contact.auth_seq_id_1 18 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 H22 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 CCN _pdbx_validate_symm_contact.auth_seq_id_2 19 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_655 _pdbx_validate_symm_contact.dist 1.35 # _pdbx_molecule_features.prd_id PRD_000160 _pdbx_molecule_features.name 'TRICHOTOXIN A50E' _pdbx_molecule_features.type Peptaibol _pdbx_molecule_features.class Antibiotic _pdbx_molecule_features.details ;TRICHOTOXIN_A50E IS AN OCTADECAMERIC HELICAL PEPTIDE. THE N-TERM IS ACETYLATED (RESIDUE 0) ; # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_000160 A 2 PRD_000160 B # _pdbx_entry_details.entry_id 1M24 _pdbx_entry_details.compound_details ;TRICHOTOXIN_A50E IS LINEAR PEPTIDE, A MEMBER OF THE PEPTAIBOL FAMILY OF MEMBRANE CHANNEL FORMING PEPTIDES. HERE, TRICHOTOXIN_A50E IS REPRESENTED BY THE SEQUENCE (SEQRES) ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 AIB N N N N 8 AIB CA C N N 9 AIB C C N N 10 AIB O O N N 11 AIB OXT O N N 12 AIB CB1 C N N 13 AIB CB2 C N N 14 AIB H H N N 15 AIB H2 H N N 16 AIB HXT H N N 17 AIB HB11 H N N 18 AIB HB12 H N N 19 AIB HB13 H N N 20 AIB HB21 H N N 21 AIB HB22 H N N 22 AIB HB23 H N N 23 ALA N N N N 24 ALA CA C N S 25 ALA C C N N 26 ALA O O N N 27 ALA CB C N N 28 ALA OXT O N N 29 ALA H H N N 30 ALA H2 H N N 31 ALA HA H N N 32 ALA HB1 H N N 33 ALA HB2 H N N 34 ALA HB3 H N N 35 ALA HXT H N N 36 CCN N N N N 37 CCN C1 C N N 38 CCN C2 C N N 39 CCN H21 H N N 40 CCN H22 H N N 41 CCN H23 H N N 42 GLN N N N N 43 GLN CA C N S 44 GLN C C N N 45 GLN O O N N 46 GLN CB C N N 47 GLN CG C N N 48 GLN CD C N N 49 GLN OE1 O N N 50 GLN NE2 N N N 51 GLN OXT O N N 52 GLN H H N N 53 GLN H2 H N N 54 GLN HA H N N 55 GLN HB2 H N N 56 GLN HB3 H N N 57 GLN HG2 H N N 58 GLN HG3 H N N 59 GLN HE21 H N N 60 GLN HE22 H N N 61 GLN HXT H N N 62 GLY N N N N 63 GLY CA C N N 64 GLY C C N N 65 GLY O O N N 66 GLY OXT O N N 67 GLY H H N N 68 GLY H2 H N N 69 GLY HA2 H N N 70 GLY HA3 H N N 71 GLY HXT H N N 72 HOH O O N N 73 HOH H1 H N N 74 HOH H2 H N N 75 LEU N N N N 76 LEU CA C N S 77 LEU C C N N 78 LEU O O N N 79 LEU CB C N N 80 LEU CG C N N 81 LEU CD1 C N N 82 LEU CD2 C N N 83 LEU OXT O N N 84 LEU H H N N 85 LEU H2 H N N 86 LEU HA H N N 87 LEU HB2 H N N 88 LEU HB3 H N N 89 LEU HG H N N 90 LEU HD11 H N N 91 LEU HD12 H N N 92 LEU HD13 H N N 93 LEU HD21 H N N 94 LEU HD22 H N N 95 LEU HD23 H N N 96 LEU HXT H N N 97 PRO N N N N 98 PRO CA C N S 99 PRO C C N N 100 PRO O O N N 101 PRO CB C N N 102 PRO CG C N N 103 PRO CD C N N 104 PRO OXT O N N 105 PRO H H N N 106 PRO HA H N N 107 PRO HB2 H N N 108 PRO HB3 H N N 109 PRO HG2 H N N 110 PRO HG3 H N N 111 PRO HD2 H N N 112 PRO HD3 H N N 113 PRO HXT H N N 114 VOL N N N N 115 VOL CA C N S 116 VOL CB C N N 117 VOL CG1 C N N 118 VOL CG2 C N N 119 VOL C C N N 120 VOL O O N N 121 VOL H H N N 122 VOL H2 H N N 123 VOL HA H N N 124 VOL HB H N N 125 VOL HG1 H N N 126 VOL HG2 H N N 127 VOL HG3 H N N 128 VOL H21 H N N 129 VOL H22 H N N 130 VOL H23 H N N 131 VOL HH1 H N N 132 VOL HH2 H N N 133 VOL HH H N N 134 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 AIB N CA sing N N 7 AIB N H sing N N 8 AIB N H2 sing N N 9 AIB CA C sing N N 10 AIB CA CB1 sing N N 11 AIB CA CB2 sing N N 12 AIB C O doub N N 13 AIB C OXT sing N N 14 AIB OXT HXT sing N N 15 AIB CB1 HB11 sing N N 16 AIB CB1 HB12 sing N N 17 AIB CB1 HB13 sing N N 18 AIB CB2 HB21 sing N N 19 AIB CB2 HB22 sing N N 20 AIB CB2 HB23 sing N N 21 ALA N CA sing N N 22 ALA N H sing N N 23 ALA N H2 sing N N 24 ALA CA C sing N N 25 ALA CA CB sing N N 26 ALA CA HA sing N N 27 ALA C O doub N N 28 ALA C OXT sing N N 29 ALA CB HB1 sing N N 30 ALA CB HB2 sing N N 31 ALA CB HB3 sing N N 32 ALA OXT HXT sing N N 33 CCN N C1 trip N N 34 CCN C1 C2 sing N N 35 CCN C2 H21 sing N N 36 CCN C2 H22 sing N N 37 CCN C2 H23 sing N N 38 GLN N CA sing N N 39 GLN N H sing N N 40 GLN N H2 sing N N 41 GLN CA C sing N N 42 GLN CA CB sing N N 43 GLN CA HA sing N N 44 GLN C O doub N N 45 GLN C OXT sing N N 46 GLN CB CG sing N N 47 GLN CB HB2 sing N N 48 GLN CB HB3 sing N N 49 GLN CG CD sing N N 50 GLN CG HG2 sing N N 51 GLN CG HG3 sing N N 52 GLN CD OE1 doub N N 53 GLN CD NE2 sing N N 54 GLN NE2 HE21 sing N N 55 GLN NE2 HE22 sing N N 56 GLN OXT HXT sing N N 57 GLY N CA sing N N 58 GLY N H sing N N 59 GLY N H2 sing N N 60 GLY CA C sing N N 61 GLY CA HA2 sing N N 62 GLY CA HA3 sing N N 63 GLY C O doub N N 64 GLY C OXT sing N N 65 GLY OXT HXT sing N N 66 HOH O H1 sing N N 67 HOH O H2 sing N N 68 LEU N CA sing N N 69 LEU N H sing N N 70 LEU N H2 sing N N 71 LEU CA C sing N N 72 LEU CA CB sing N N 73 LEU CA HA sing N N 74 LEU C O doub N N 75 LEU C OXT sing N N 76 LEU CB CG sing N N 77 LEU CB HB2 sing N N 78 LEU CB HB3 sing N N 79 LEU CG CD1 sing N N 80 LEU CG CD2 sing N N 81 LEU CG HG sing N N 82 LEU CD1 HD11 sing N N 83 LEU CD1 HD12 sing N N 84 LEU CD1 HD13 sing N N 85 LEU CD2 HD21 sing N N 86 LEU CD2 HD22 sing N N 87 LEU CD2 HD23 sing N N 88 LEU OXT HXT sing N N 89 PRO N CA sing N N 90 PRO N CD sing N N 91 PRO N H sing N N 92 PRO CA C sing N N 93 PRO CA CB sing N N 94 PRO CA HA sing N N 95 PRO C O doub N N 96 PRO C OXT sing N N 97 PRO CB CG sing N N 98 PRO CB HB2 sing N N 99 PRO CB HB3 sing N N 100 PRO CG CD sing N N 101 PRO CG HG2 sing N N 102 PRO CG HG3 sing N N 103 PRO CD HD2 sing N N 104 PRO CD HD3 sing N N 105 PRO OXT HXT sing N N 106 VOL N CA sing N N 107 VOL N H sing N N 108 VOL N H2 sing N N 109 VOL CA CB sing N N 110 VOL CA C sing N N 111 VOL CA HA sing N N 112 VOL CB CG1 sing N N 113 VOL CB CG2 sing N N 114 VOL CB HB sing N N 115 VOL CG1 HG1 sing N N 116 VOL CG1 HG2 sing N N 117 VOL CG1 HG3 sing N N 118 VOL CG2 H21 sing N N 119 VOL CG2 H22 sing N N 120 VOL CG2 H23 sing N N 121 VOL C O sing N N 122 VOL C HH1 sing N N 123 VOL C HH2 sing N N 124 VOL O HH sing N N 125 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type other _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.details 'MODEL OF HELICAL PEPTIDE, RESIDUES 1-13.' # _atom_sites.entry_id 1M24 _atom_sites.fract_transf_matrix[1][1] 0.105374 _atom_sites.fract_transf_matrix[1][2] 0.017539 _atom_sites.fract_transf_matrix[1][3] 0.017299 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.060164 _atom_sites.fract_transf_matrix[2][3] 0.007675 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.032140 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_