HEADER VIRAL PROTEIN 01-JUL-02 1M3Y OBSLTE 18-OCT-17 1M3Y 5TIP TITLE THE STRUCTURE OF MAJOR CAPSID PROTEIN OF A LARGE, LIPID CONTAINING, TITLE 2 DNA VIRUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: THE MAJOR CAPSID PROTEIN OF PBCV-1, VP54; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: RESIDUES 25-437 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PARAMECIUM BURSARIA CHLORELLA VIRUS 1; SOURCE 3 ORGANISM_TAXID: 10506; SOURCE 4 OTHER_DETAILS: HOST VIRUS KEYWDS MAJOR CAPSIT PROTEIN VP54, PBCV-1, CHLORELLA VIRUS, JELLY ROLL MOTIF, KEYWDS 2 GLYCOPROTEIN, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.NANDHAGOPAL,A.A.SIMPSON,J.R.GURNON,X.YAN,T.S.BAKER,M.V.GRAVES, AUTHOR 2 J.L.VAN ETTEN,M.G.ROSSMANN REVDAT 4 18-OCT-17 1M3Y 1 OBSLTE REVDAT 3 13-JUL-11 1M3Y 1 VERSN REVDAT 2 24-FEB-09 1M3Y 1 VERSN REVDAT 1 04-DEC-02 1M3Y 0 JRNL AUTH N.NANDHAGOPAL,A.A.SIMPSON,J.R.GURNON,X.YAN,T.S.BAKER, JRNL AUTH 2 M.V.GRAVES,J.L.VAN ETTEN,M.G.ROSSMANN JRNL TITL THE STRUCTURE AND EVOLUTION OF THE MAJOR CAPSID PROTEIN OF A JRNL TITL 2 LARGE, LIPID-CONTAINING DNA VIRUS JRNL REF PROC.NATL.ACAD.SCI.USA V. 99 14758 2002 JRNL REFN ISSN 0027-8424 JRNL PMID 12411581 JRNL DOI 10.1073/PNAS.232580699 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 84.43 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.4 REMARK 3 NUMBER OF REFLECTIONS : 139146 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.342 REMARK 3 FREE R VALUE : 0.352 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.900 REMARK 3 FREE R VALUE TEST SET COUNT : 4095 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.13 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 21468 REMARK 3 BIN R VALUE (WORKING SET) : 0.4050 REMARK 3 BIN FREE R VALUE : 0.3990 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 3.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 667 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.015 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 12924 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 284 REMARK 3 SOLVENT ATOMS : 53 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.43 REMARK 3 ESD FROM SIGMAA (A) : 0.40 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.44 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.40 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.240 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 57.75 REMARK 3 BSOL : 0.42 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : PARAMETER_INFILE_5 REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : TOPOLOGY_INFILE_2 REMARK 3 TOPOLOGY FILE 3 : TOPOLOGY_INFILE_3 REMARK 3 TOPOLOGY FILE 4 : TOPOLOGY_INFILE_4 REMARK 3 TOPOLOGY FILE 5 : TOPOLOGY_INFILE_5 REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1M3Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 99 REMARK 99 THERE IS UNCERTAINTY ABOUT THE SUGAR MOLECULES MODELED. REMARK 99 THE RING STRUCTURE OF SUGAR MOLECULES WERE JUST PLACED IN REMARK 99 THE DENSITY REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-JUL-02. REMARK 100 THE DEPOSITION ID IS D_1000016567. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-FEB-02 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 148902 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 40.00 REMARK 200 R MERGE (I) : 0.13200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.53200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1J5Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.4~4.0M SODIUM FORMATE, 50MM TRIS PH REMARK 280 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 94.39600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 94.39600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 94.39600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 94.39600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 94.39600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 94.39600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 94.39600 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 94.39600 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 94.39600 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 94.39600 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 94.39600 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 94.39600 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 94.39600 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 94.39600 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 94.39600 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 94.39600 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 94.39600 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 94.39600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 17610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -178.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 94.39600 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 94.39600 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 -94.39600 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 94.39600 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 17550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -179.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 94.39600 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 94.39600 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 -94.39600 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 94.39600 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 17540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -179.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 17670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -179.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C4 NDG B 538 O2 MAN B 539 2.07 REMARK 500 C4 NDG A 438 O2 MAN A 439 2.12 REMARK 500 C4 NDG D 738 O2 MAN D 739 2.12 REMARK 500 C4 NDG C 638 O2 MAN C 639 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR A 86 CE1 TYR A 86 CZ 0.081 REMARK 500 LEU A 119 CG LEU A 119 CD2 -0.291 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 86 CG - CD1 - CE1 ANGL. DEV. = -7.7 DEGREES REMARK 500 LEU A 119 CB - CG - CD2 ANGL. DEV. = -13.5 DEGREES REMARK 500 LEU C 353 CA - CB - CG ANGL. DEV. = 13.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 28 71.81 -150.14 REMARK 500 THR A 68 -95.16 -124.26 REMARK 500 ASN A 81 -139.90 -86.75 REMARK 500 ASN A 123 -138.91 57.50 REMARK 500 GLN A 169 -19.25 -48.37 REMARK 500 VAL A 186 -68.90 -133.29 REMARK 500 THR A 234 131.48 -170.35 REMARK 500 ALA A 243 -179.32 164.47 REMARK 500 THR A 244 -3.95 45.28 REMARK 500 HIS A 257 170.81 62.31 REMARK 500 PRO A 269 -39.79 -37.87 REMARK 500 TYR A 272 -82.88 -38.37 REMARK 500 SER A 366 44.38 -153.36 REMARK 500 MET A 427 149.22 -170.54 REMARK 500 THR B 68 -94.43 -123.71 REMARK 500 ASN B 81 -138.25 -87.65 REMARK 500 ASN B 123 -139.50 55.48 REMARK 500 GLN B 169 -17.99 -49.17 REMARK 500 VAL B 186 -69.56 -132.92 REMARK 500 THR B 234 130.92 -170.35 REMARK 500 ALA B 243 179.86 164.48 REMARK 500 THR B 244 -4.97 46.35 REMARK 500 HIS B 257 170.56 62.19 REMARK 500 PRO B 269 -39.97 -39.36 REMARK 500 TYR B 272 -82.78 -36.70 REMARK 500 SER B 366 43.57 -155.17 REMARK 500 MET B 427 148.92 -172.16 REMARK 500 THR C 68 -95.84 -123.69 REMARK 500 ASN C 81 -140.41 -88.04 REMARK 500 ASN C 123 -138.98 56.50 REMARK 500 GLN C 169 -18.87 -47.62 REMARK 500 VAL C 186 -70.16 -132.90 REMARK 500 ALA C 243 179.63 161.59 REMARK 500 THR C 244 -6.47 47.00 REMARK 500 HIS C 257 170.98 62.74 REMARK 500 PRO C 269 -39.37 -39.85 REMARK 500 TYR C 272 -82.04 -37.44 REMARK 500 SER C 366 43.47 -154.88 REMARK 500 MET C 427 149.18 -170.71 REMARK 500 LYS D 28 72.98 -150.18 REMARK 500 THR D 68 -94.64 -123.98 REMARK 500 ASN D 81 -139.74 -87.62 REMARK 500 ASN D 123 -138.94 57.12 REMARK 500 GLN D 169 -18.94 -49.75 REMARK 500 VAL D 186 -70.91 -131.10 REMARK 500 ALA D 243 177.78 162.17 REMARK 500 THR D 244 -5.87 49.21 REMARK 500 HIS D 257 171.58 62.74 REMARK 500 TYR D 272 -82.56 -39.32 REMARK 500 SER D 366 44.10 -153.37 REMARK 500 REMARK 500 THIS ENTRY HAS 51 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 86 0.13 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 444 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 406 O REMARK 620 2 THR A 409 OG1 42.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG B 544 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 409 OG1 REMARK 620 2 ASN B 406 O 43.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG C 644 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR C 409 OG1 REMARK 620 2 CYS C 386 SG 122.2 REMARK 620 3 ASN C 406 O 42.5 100.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG D 744 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN D 406 O REMARK 620 2 SER D 242 O 121.8 REMARK 620 3 SER D 242 N 168.7 63.1 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDG A 438 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN A 439 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG A 440 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN A 441 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDG A 442 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDG B 538 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN B 539 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG B 540 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN B 541 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDG B 542 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDG C 638 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN C 639 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG C 640 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN C 641 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDG C 642 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDG D 738 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN D 739 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG D 740 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN D 741 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDG D 742 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 443 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 444 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG B 543 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG B 544 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG C 643 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG C 644 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG D 743 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG D 744 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1J5Q RELATED DB: PDB REMARK 900 THE SAME PROTEIN SOLVED IN DIFFERENT SPACE GROUP REMARK 900 RELATED ID: 1M4X RELATED DB: PDB REMARK 900 THE SAME PROTEIN STUDIED BY CRYO-ELECTRON MICROSCOPY DBREF 1M3Y A 25 437 UNP P30328 COAT_CHVP1 25 437 DBREF 1M3Y B 25 437 UNP P30328 COAT_CHVP1 25 437 DBREF 1M3Y C 25 437 UNP P30328 COAT_CHVP1 25 437 DBREF 1M3Y D 25 437 UNP P30328 COAT_CHVP1 25 437 SEQRES 1 A 413 THR PHE PHE LYS THR VAL TYR ARG ARG TYR THR ASN PHE SEQRES 2 A 413 ALA ILE GLU SER ILE GLN GLN THR ILE ASN GLY SER VAL SEQRES 3 A 413 GLY PHE GLY ASN LYS VAL SER THR GLN ILE SER ARG ASN SEQRES 4 A 413 GLY ASP LEU ILE THR ASP ILE VAL VAL GLU PHE VAL LEU SEQRES 5 A 413 THR LYS GLY GLY ASN GLY GLY THR THR TYR TYR PRO ALA SEQRES 6 A 413 GLU GLU LEU LEU GLN ASP VAL GLU LEU GLU ILE GLY GLY SEQRES 7 A 413 GLN ARG ILE ASP LYS HIS TYR ASN ASP TRP PHE ARG THR SEQRES 8 A 413 TYR ASP ALA LEU PHE ARG MET ASN ASP ASP ARG TYR ASN SEQRES 9 A 413 TYR ARG ARG MET THR ASP TRP VAL ASN ASN GLU LEU VAL SEQRES 10 A 413 GLY ALA GLN LYS ARG PHE TYR VAL PRO LEU ILE PHE PHE SEQRES 11 A 413 PHE ASN GLN THR PRO GLY LEU ALA LEU PRO LEU ILE ALA SEQRES 12 A 413 LEU GLN TYR HIS GLU VAL LYS LEU TYR PHE THR LEU ALA SEQRES 13 A 413 SER GLN VAL GLN GLY VAL ASN TYR ASN GLY SER SER ALA SEQRES 14 A 413 ILE ALA GLY ALA ALA GLN PRO THR MET SER VAL TRP VAL SEQRES 15 A 413 ASP TYR ILE PHE LEU ASP THR GLN GLU ARG THR ARG PHE SEQRES 16 A 413 ALA GLN LEU PRO HIS GLU TYR LEU ILE GLU GLN LEU GLN SEQRES 17 A 413 PHE THR GLY SER GLU THR ALA THR PRO SER ALA THR THR SEQRES 18 A 413 GLN ALA SER GLN ASN ILE ARG LEU ASN PHE ASN HIS PRO SEQRES 19 A 413 THR LYS TYR LEU ALA TRP ASN PHE ASN ASN PRO THR ASN SEQRES 20 A 413 TYR GLY GLN TYR THR ALA LEU ALA ASN ILE PRO GLY ALA SEQRES 21 A 413 CYS SER GLY ALA GLY THR ALA ALA ALA THR VAL THR THR SEQRES 22 A 413 PRO ASP TYR GLY ASN THR GLY THR TYR ASN GLU GLN LEU SEQRES 23 A 413 ALA VAL LEU ASP SER ALA LYS ILE GLN LEU ASN GLY GLN SEQRES 24 A 413 ASP ARG PHE ALA THR ARG LYS GLY SER TYR PHE ASN LYS SEQRES 25 A 413 VAL GLN PRO TYR GLN SER ILE GLY GLY VAL THR PRO ALA SEQRES 26 A 413 GLY VAL TYR LEU TYR SER PHE ALA LEU LYS PRO ALA GLY SEQRES 27 A 413 ARG GLN PRO SER GLY THR CYS ASN PHE SER ARG ILE ASP SEQRES 28 A 413 ASN ALA THR LEU SER LEU THR TYR LYS THR CYS SER ILE SEQRES 29 A 413 ASP ALA THR SER PRO ALA ALA VAL LEU GLY ASN THR GLU SEQRES 30 A 413 THR VAL THR ALA ASN THR ALA THR LEU LEU THR ALA LEU SEQRES 31 A 413 ASN ILE TYR ALA LYS ASN TYR ASN VAL LEU ARG ILE MET SEQRES 32 A 413 SER GLY MET GLY GLY LEU ALA TYR ALA ASN SEQRES 1 B 413 THR PHE PHE LYS THR VAL TYR ARG ARG TYR THR ASN PHE SEQRES 2 B 413 ALA ILE GLU SER ILE GLN GLN THR ILE ASN GLY SER VAL SEQRES 3 B 413 GLY PHE GLY ASN LYS VAL SER THR GLN ILE SER ARG ASN SEQRES 4 B 413 GLY ASP LEU ILE THR ASP ILE VAL VAL GLU PHE VAL LEU SEQRES 5 B 413 THR LYS GLY GLY ASN GLY GLY THR THR TYR TYR PRO ALA SEQRES 6 B 413 GLU GLU LEU LEU GLN ASP VAL GLU LEU GLU ILE GLY GLY SEQRES 7 B 413 GLN ARG ILE ASP LYS HIS TYR ASN ASP TRP PHE ARG THR SEQRES 8 B 413 TYR ASP ALA LEU PHE ARG MET ASN ASP ASP ARG TYR ASN SEQRES 9 B 413 TYR ARG ARG MET THR ASP TRP VAL ASN ASN GLU LEU VAL SEQRES 10 B 413 GLY ALA GLN LYS ARG PHE TYR VAL PRO LEU ILE PHE PHE SEQRES 11 B 413 PHE ASN GLN THR PRO GLY LEU ALA LEU PRO LEU ILE ALA SEQRES 12 B 413 LEU GLN TYR HIS GLU VAL LYS LEU TYR PHE THR LEU ALA SEQRES 13 B 413 SER GLN VAL GLN GLY VAL ASN TYR ASN GLY SER SER ALA SEQRES 14 B 413 ILE ALA GLY ALA ALA GLN PRO THR MET SER VAL TRP VAL SEQRES 15 B 413 ASP TYR ILE PHE LEU ASP THR GLN GLU ARG THR ARG PHE SEQRES 16 B 413 ALA GLN LEU PRO HIS GLU TYR LEU ILE GLU GLN LEU GLN SEQRES 17 B 413 PHE THR GLY SER GLU THR ALA THR PRO SER ALA THR THR SEQRES 18 B 413 GLN ALA SER GLN ASN ILE ARG LEU ASN PHE ASN HIS PRO SEQRES 19 B 413 THR LYS TYR LEU ALA TRP ASN PHE ASN ASN PRO THR ASN SEQRES 20 B 413 TYR GLY GLN TYR THR ALA LEU ALA ASN ILE PRO GLY ALA SEQRES 21 B 413 CYS SER GLY ALA GLY THR ALA ALA ALA THR VAL THR THR SEQRES 22 B 413 PRO ASP TYR GLY ASN THR GLY THR TYR ASN GLU GLN LEU SEQRES 23 B 413 ALA VAL LEU ASP SER ALA LYS ILE GLN LEU ASN GLY GLN SEQRES 24 B 413 ASP ARG PHE ALA THR ARG LYS GLY SER TYR PHE ASN LYS SEQRES 25 B 413 VAL GLN PRO TYR GLN SER ILE GLY GLY VAL THR PRO ALA SEQRES 26 B 413 GLY VAL TYR LEU TYR SER PHE ALA LEU LYS PRO ALA GLY SEQRES 27 B 413 ARG GLN PRO SER GLY THR CYS ASN PHE SER ARG ILE ASP SEQRES 28 B 413 ASN ALA THR LEU SER LEU THR TYR LYS THR CYS SER ILE SEQRES 29 B 413 ASP ALA THR SER PRO ALA ALA VAL LEU GLY ASN THR GLU SEQRES 30 B 413 THR VAL THR ALA ASN THR ALA THR LEU LEU THR ALA LEU SEQRES 31 B 413 ASN ILE TYR ALA LYS ASN TYR ASN VAL LEU ARG ILE MET SEQRES 32 B 413 SER GLY MET GLY GLY LEU ALA TYR ALA ASN SEQRES 1 C 413 THR PHE PHE LYS THR VAL TYR ARG ARG TYR THR ASN PHE SEQRES 2 C 413 ALA ILE GLU SER ILE GLN GLN THR ILE ASN GLY SER VAL SEQRES 3 C 413 GLY PHE GLY ASN LYS VAL SER THR GLN ILE SER ARG ASN SEQRES 4 C 413 GLY ASP LEU ILE THR ASP ILE VAL VAL GLU PHE VAL LEU SEQRES 5 C 413 THR LYS GLY GLY ASN GLY GLY THR THR TYR TYR PRO ALA SEQRES 6 C 413 GLU GLU LEU LEU GLN ASP VAL GLU LEU GLU ILE GLY GLY SEQRES 7 C 413 GLN ARG ILE ASP LYS HIS TYR ASN ASP TRP PHE ARG THR SEQRES 8 C 413 TYR ASP ALA LEU PHE ARG MET ASN ASP ASP ARG TYR ASN SEQRES 9 C 413 TYR ARG ARG MET THR ASP TRP VAL ASN ASN GLU LEU VAL SEQRES 10 C 413 GLY ALA GLN LYS ARG PHE TYR VAL PRO LEU ILE PHE PHE SEQRES 11 C 413 PHE ASN GLN THR PRO GLY LEU ALA LEU PRO LEU ILE ALA SEQRES 12 C 413 LEU GLN TYR HIS GLU VAL LYS LEU TYR PHE THR LEU ALA SEQRES 13 C 413 SER GLN VAL GLN GLY VAL ASN TYR ASN GLY SER SER ALA SEQRES 14 C 413 ILE ALA GLY ALA ALA GLN PRO THR MET SER VAL TRP VAL SEQRES 15 C 413 ASP TYR ILE PHE LEU ASP THR GLN GLU ARG THR ARG PHE SEQRES 16 C 413 ALA GLN LEU PRO HIS GLU TYR LEU ILE GLU GLN LEU GLN SEQRES 17 C 413 PHE THR GLY SER GLU THR ALA THR PRO SER ALA THR THR SEQRES 18 C 413 GLN ALA SER GLN ASN ILE ARG LEU ASN PHE ASN HIS PRO SEQRES 19 C 413 THR LYS TYR LEU ALA TRP ASN PHE ASN ASN PRO THR ASN SEQRES 20 C 413 TYR GLY GLN TYR THR ALA LEU ALA ASN ILE PRO GLY ALA SEQRES 21 C 413 CYS SER GLY ALA GLY THR ALA ALA ALA THR VAL THR THR SEQRES 22 C 413 PRO ASP TYR GLY ASN THR GLY THR TYR ASN GLU GLN LEU SEQRES 23 C 413 ALA VAL LEU ASP SER ALA LYS ILE GLN LEU ASN GLY GLN SEQRES 24 C 413 ASP ARG PHE ALA THR ARG LYS GLY SER TYR PHE ASN LYS SEQRES 25 C 413 VAL GLN PRO TYR GLN SER ILE GLY GLY VAL THR PRO ALA SEQRES 26 C 413 GLY VAL TYR LEU TYR SER PHE ALA LEU LYS PRO ALA GLY SEQRES 27 C 413 ARG GLN PRO SER GLY THR CYS ASN PHE SER ARG ILE ASP SEQRES 28 C 413 ASN ALA THR LEU SER LEU THR TYR LYS THR CYS SER ILE SEQRES 29 C 413 ASP ALA THR SER PRO ALA ALA VAL LEU GLY ASN THR GLU SEQRES 30 C 413 THR VAL THR ALA ASN THR ALA THR LEU LEU THR ALA LEU SEQRES 31 C 413 ASN ILE TYR ALA LYS ASN TYR ASN VAL LEU ARG ILE MET SEQRES 32 C 413 SER GLY MET GLY GLY LEU ALA TYR ALA ASN SEQRES 1 D 413 THR PHE PHE LYS THR VAL TYR ARG ARG TYR THR ASN PHE SEQRES 2 D 413 ALA ILE GLU SER ILE GLN GLN THR ILE ASN GLY SER VAL SEQRES 3 D 413 GLY PHE GLY ASN LYS VAL SER THR GLN ILE SER ARG ASN SEQRES 4 D 413 GLY ASP LEU ILE THR ASP ILE VAL VAL GLU PHE VAL LEU SEQRES 5 D 413 THR LYS GLY GLY ASN GLY GLY THR THR TYR TYR PRO ALA SEQRES 6 D 413 GLU GLU LEU LEU GLN ASP VAL GLU LEU GLU ILE GLY GLY SEQRES 7 D 413 GLN ARG ILE ASP LYS HIS TYR ASN ASP TRP PHE ARG THR SEQRES 8 D 413 TYR ASP ALA LEU PHE ARG MET ASN ASP ASP ARG TYR ASN SEQRES 9 D 413 TYR ARG ARG MET THR ASP TRP VAL ASN ASN GLU LEU VAL SEQRES 10 D 413 GLY ALA GLN LYS ARG PHE TYR VAL PRO LEU ILE PHE PHE SEQRES 11 D 413 PHE ASN GLN THR PRO GLY LEU ALA LEU PRO LEU ILE ALA SEQRES 12 D 413 LEU GLN TYR HIS GLU VAL LYS LEU TYR PHE THR LEU ALA SEQRES 13 D 413 SER GLN VAL GLN GLY VAL ASN TYR ASN GLY SER SER ALA SEQRES 14 D 413 ILE ALA GLY ALA ALA GLN PRO THR MET SER VAL TRP VAL SEQRES 15 D 413 ASP TYR ILE PHE LEU ASP THR GLN GLU ARG THR ARG PHE SEQRES 16 D 413 ALA GLN LEU PRO HIS GLU TYR LEU ILE GLU GLN LEU GLN SEQRES 17 D 413 PHE THR GLY SER GLU THR ALA THR PRO SER ALA THR THR SEQRES 18 D 413 GLN ALA SER GLN ASN ILE ARG LEU ASN PHE ASN HIS PRO SEQRES 19 D 413 THR LYS TYR LEU ALA TRP ASN PHE ASN ASN PRO THR ASN SEQRES 20 D 413 TYR GLY GLN TYR THR ALA LEU ALA ASN ILE PRO GLY ALA SEQRES 21 D 413 CYS SER GLY ALA GLY THR ALA ALA ALA THR VAL THR THR SEQRES 22 D 413 PRO ASP TYR GLY ASN THR GLY THR TYR ASN GLU GLN LEU SEQRES 23 D 413 ALA VAL LEU ASP SER ALA LYS ILE GLN LEU ASN GLY GLN SEQRES 24 D 413 ASP ARG PHE ALA THR ARG LYS GLY SER TYR PHE ASN LYS SEQRES 25 D 413 VAL GLN PRO TYR GLN SER ILE GLY GLY VAL THR PRO ALA SEQRES 26 D 413 GLY VAL TYR LEU TYR SER PHE ALA LEU LYS PRO ALA GLY SEQRES 27 D 413 ARG GLN PRO SER GLY THR CYS ASN PHE SER ARG ILE ASP SEQRES 28 D 413 ASN ALA THR LEU SER LEU THR TYR LYS THR CYS SER ILE SEQRES 29 D 413 ASP ALA THR SER PRO ALA ALA VAL LEU GLY ASN THR GLU SEQRES 30 D 413 THR VAL THR ALA ASN THR ALA THR LEU LEU THR ALA LEU SEQRES 31 D 413 ASN ILE TYR ALA LYS ASN TYR ASN VAL LEU ARG ILE MET SEQRES 32 D 413 SER GLY MET GLY GLY LEU ALA TYR ALA ASN HET NDG A 438 15 HET MAN A 439 12 HET NAG A 440 15 HET MAN A 441 12 HET NDG A 442 15 HET HG A 443 1 HET HG A 444 1 HET NDG B 538 15 HET MAN B 539 12 HET NAG B 540 15 HET MAN B 541 12 HET NDG B 542 15 HET HG B 543 1 HET HG B 544 1 HET NDG C 638 15 HET MAN C 639 12 HET NAG C 640 15 HET MAN C 641 12 HET NDG C 642 15 HET HG C 643 1 HET HG C 644 1 HET NDG D 738 15 HET MAN D 739 12 HET NAG D 740 15 HET MAN D 741 12 HET NDG D 742 15 HET HG D 743 1 HET HG D 744 1 HETNAM NDG 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOSE HETNAM NAG N-ACETYL-D-GLUCOSAMINE HETNAM HG MERCURY (II) ION FORMUL 5 NDG 8(C8 H15 N O6) FORMUL 6 MAN 8(C6 H12 O6) FORMUL 7 NAG 4(C8 H15 N O6) FORMUL 10 HG 8(HG 2+) FORMUL 33 HOH *53(H2 O) HELIX 1 1 TYR A 87 LEU A 92 1 6 HELIX 2 2 ASN A 110 ARG A 121 1 12 HELIX 3 3 MET A 122 ASP A 134 1 13 HELIX 4 4 THR A 158 ALA A 162 5 5 HELIX 5 5 ILE A 166 LEU A 168 5 3 HELIX 6 6 ASP A 212 LEU A 222 1 11 HELIX 7 7 ASP A 299 THR A 303 5 5 HELIX 8 8 ASN A 307 ALA A 311 5 5 HELIX 9 9 GLY A 331 LYS A 336 1 6 HELIX 10 10 LYS A 336 ILE A 343 1 8 HELIX 11 11 SER A 392 LEU A 397 1 6 HELIX 12 12 THR A 407 LEU A 411 5 5 HELIX 13 13 TYR B 87 LEU B 92 1 6 HELIX 14 14 ASN B 110 ARG B 121 1 12 HELIX 15 15 MET B 122 ASP B 134 1 13 HELIX 16 16 THR B 158 ALA B 162 5 5 HELIX 17 17 ILE B 166 LEU B 168 5 3 HELIX 18 18 ASP B 212 LEU B 222 1 11 HELIX 19 19 ASP B 299 THR B 303 5 5 HELIX 20 20 ASN B 307 ALA B 311 5 5 HELIX 21 21 GLY B 331 LYS B 336 1 6 HELIX 22 22 LYS B 336 ILE B 343 1 8 HELIX 23 23 SER B 392 LEU B 397 1 6 HELIX 24 24 THR B 407 LEU B 411 5 5 HELIX 25 25 TYR C 87 LEU C 92 1 6 HELIX 26 26 ASN C 110 ARG C 121 1 12 HELIX 27 27 MET C 122 ASP C 134 1 13 HELIX 28 28 THR C 158 ALA C 162 5 5 HELIX 29 29 ILE C 166 LEU C 168 5 3 HELIX 30 30 ASP C 212 LEU C 222 1 11 HELIX 31 31 ASP C 299 THR C 303 5 5 HELIX 32 32 ASN C 307 ALA C 311 5 5 HELIX 33 33 GLY C 331 ILE C 343 1 13 HELIX 34 34 SER C 392 LEU C 397 1 6 HELIX 35 35 THR C 407 LEU C 411 5 5 HELIX 36 36 TYR D 87 LEU D 92 1 6 HELIX 37 37 ASN D 110 ARG D 121 1 12 HELIX 38 38 MET D 122 ASP D 134 1 13 HELIX 39 39 THR D 158 ALA D 162 5 5 HELIX 40 40 ILE D 166 LEU D 168 5 3 HELIX 41 41 ASP D 212 LEU D 222 1 11 HELIX 42 42 ASP D 299 THR D 303 5 5 HELIX 43 43 ASN D 307 ALA D 311 5 5 HELIX 44 44 GLY D 331 LYS D 336 1 6 HELIX 45 45 LYS D 336 ILE D 343 1 8 HELIX 46 46 SER D 392 LEU D 397 1 6 HELIX 47 47 THR D 407 LEU D 411 5 5 SHEET 1 A 6 PHE A 37 GLN A 44 0 SHEET 2 A 6 THR A 201 LEU A 211 -1 O VAL A 204 N GLN A 44 SHEET 3 A 6 LEU A 66 THR A 77 -1 O LEU A 66 N ILE A 209 SHEET 4 A 6 GLN A 144 PRO A 150 -1 N LYS A 145 O LEU A 76 SHEET 5 A 6 LEU A 66 THR A 77 -1 O VAL A 72 N VAL A 149 SHEET 6 A 6 LEU A 163 PRO A 164 -1 N LEU A 163 O ILE A 67 SHEET 1 B 4 LYS A 55 GLN A 59 0 SHEET 2 B 4 VAL A 173 LEU A 179 -1 N LEU A 175 O THR A 58 SHEET 3 B 4 LEU A 93 ILE A 100 -1 N GLN A 94 O THR A 178 SHEET 4 B 4 GLN A 103 TYR A 109 -1 O GLN A 103 N ILE A 100 SHEET 1 C 2 TYR A 188 ASN A 189 0 SHEET 2 C 2 SER A 192 ALA A 193 -1 O SER A 192 N ASN A 189 SHEET 1 D 8 HIS A 224 GLN A 232 0 SHEET 2 D 8 ALA A 413 MET A 427 -1 O ALA A 418 N GLN A 232 SHEET 3 D 8 GLY A 235 GLU A 237 -1 O SER A 236 N LEU A 414 SHEET 4 D 8 ALA A 413 MET A 427 -1 N LEU A 414 O SER A 236 SHEET 5 D 8 PRO A 258 ASN A 267 -1 O PRO A 258 N TYR A 421 SHEET 6 D 8 VAL A 351 SER A 355 -1 N TYR A 352 O TRP A 264 SHEET 7 D 8 PRO A 258 ASN A 267 -1 N LEU A 262 O TYR A 354 SHEET 8 D 8 CYS A 369 ASN A 370 -1 O CYS A 369 N THR A 259 SHEET 1 E 6 SER A 248 LEU A 253 0 SHEET 2 E 6 ALA A 377 TYR A 383 -1 O ALA A 377 N LEU A 253 SHEET 3 E 6 LEU A 313 LEU A 320 -1 N ASP A 314 O THR A 382 SHEET 4 E 6 GLN A 323 ASP A 324 -1 N GLN A 323 O LEU A 320 SHEET 5 E 6 LEU A 313 LEU A 320 -1 O LEU A 320 N GLN A 323 SHEET 6 E 6 ARG A 329 LYS A 330 -1 O ARG A 329 N ALA A 316 SHEET 1 F 2 THR A 385 ILE A 388 0 SHEET 2 F 2 VAL A 403 ALA A 405 1 O THR A 404 N ILE A 388 SHEET 1 G 6 PHE B 37 GLN B 44 0 SHEET 2 G 6 THR B 201 LEU B 211 -1 O VAL B 204 N GLN B 44 SHEET 3 G 6 LEU B 66 THR B 77 -1 O LEU B 66 N ILE B 209 SHEET 4 G 6 GLN B 144 PRO B 150 -1 N LYS B 145 O LEU B 76 SHEET 5 G 6 LEU B 66 THR B 77 -1 O VAL B 72 N VAL B 149 SHEET 6 G 6 LEU B 163 PRO B 164 -1 N LEU B 163 O ILE B 67 SHEET 1 H 4 LYS B 55 GLN B 59 0 SHEET 2 H 4 VAL B 173 LEU B 179 -1 N LEU B 175 O THR B 58 SHEET 3 H 4 LEU B 93 ILE B 100 -1 N GLN B 94 O THR B 178 SHEET 4 H 4 GLN B 103 TYR B 109 -1 O GLN B 103 N ILE B 100 SHEET 1 I 2 TYR B 188 ASN B 189 0 SHEET 2 I 2 SER B 192 ALA B 193 -1 O SER B 192 N ASN B 189 SHEET 1 J 8 HIS B 224 GLU B 237 0 SHEET 2 J 8 ALA B 413 MET B 427 -1 N LEU B 414 O SER B 236 SHEET 3 J 8 MET B 430 LEU B 433 -1 O MET B 430 N MET B 427 SHEET 4 J 8 ALA B 413 MET B 427 -1 N ARG B 425 O GLY B 432 SHEET 5 J 8 PRO B 258 ASN B 267 -1 O PRO B 258 N TYR B 421 SHEET 6 J 8 CYS B 369 ASN B 370 -1 O CYS B 369 N THR B 259 SHEET 7 J 8 PRO B 258 ASN B 267 -1 N THR B 259 O CYS B 369 SHEET 8 J 8 VAL B 351 SER B 355 -1 N TYR B 352 O TRP B 264 SHEET 1 K 6 SER B 248 LEU B 253 0 SHEET 2 K 6 ALA B 377 TYR B 383 -1 O ALA B 377 N LEU B 253 SHEET 3 K 6 LEU B 313 LEU B 320 -1 N ASP B 314 O THR B 382 SHEET 4 K 6 GLN B 323 ASP B 324 -1 N GLN B 323 O LEU B 320 SHEET 5 K 6 LEU B 313 LEU B 320 -1 N LEU B 320 O GLN B 323 SHEET 6 K 6 ARG B 329 LYS B 330 -1 O ARG B 329 N ALA B 316 SHEET 1 L 2 THR B 385 ILE B 388 0 SHEET 2 L 2 VAL B 403 ALA B 405 1 O THR B 404 N ILE B 388 SHEET 1 M 6 PHE C 37 GLN C 44 0 SHEET 2 M 6 THR C 201 LEU C 211 -1 O VAL C 204 N GLN C 44 SHEET 3 M 6 LEU C 66 THR C 77 -1 O LEU C 66 N ILE C 209 SHEET 4 M 6 LEU C 163 PRO C 164 -1 N LEU C 163 O ILE C 67 SHEET 5 M 6 LEU C 66 THR C 77 -1 O ILE C 67 N LEU C 163 SHEET 6 M 6 GLN C 144 PRO C 150 -1 N LYS C 145 O LEU C 76 SHEET 1 N 4 LYS C 55 GLN C 59 0 SHEET 2 N 4 VAL C 173 LEU C 179 -1 N LEU C 175 O THR C 58 SHEET 3 N 4 LEU C 93 ILE C 100 -1 N GLN C 94 O THR C 178 SHEET 4 N 4 GLN C 103 TYR C 109 -1 O GLN C 103 N ILE C 100 LINK HG HG A 443 SG CYS A 369 1555 1555 2.59 LINK HG HG A 444 O ASN A 406 1555 1555 3.50 LINK HG HG A 444 OG1 THR A 409 1555 1555 3.23 LINK HG HG B 543 SG CYS B 369 1555 1555 2.54 LINK HG HG B 544 OG1 THR B 409 1555 1555 3.23 LINK HG HG B 544 O ASN B 406 1555 1555 3.23 LINK HG HG C 643 SG CYS C 369 1555 1555 2.57 LINK HG HG C 644 OG1 THR C 409 1555 1555 3.23 LINK HG HG C 644 SG CYS C 386 1555 1555 3.37 LINK HG HG C 644 O ASN C 406 1555 1555 3.44 LINK HG HG D 743 SG CYS D 369 1555 1555 2.70 LINK HG HG D 744 O ASN D 406 1555 1555 3.53 LINK HG HG D 744 O SER D 242 1555 1555 3.36 LINK HG HG D 744 N SER D 242 1555 1555 3.52 SITE 1 AC1 7 ASN A 280 GLY A 289 THR A 290 ALA A 293 SITE 2 AC1 7 THR A 391 PRO A 393 MAN A 439 SITE 1 AC2 2 ALA A 291 NDG A 438 SITE 1 AC3 8 SER A 387 ILE A 388 ASP A 389 ALA A 395 SITE 2 AC3 8 GLY A 398 ASN A 399 MAN A 441 HOH A 453 SITE 1 AC4 1 NAG A 440 SITE 1 AC5 4 ASP A 389 THR A 391 ASN A 406 THR A 409 SITE 1 AC6 7 ASN B 280 GLY B 289 THR B 290 ALA B 293 SITE 2 AC6 7 THR B 391 PRO B 393 MAN B 539 SITE 1 AC7 2 ALA B 291 NDG B 538 SITE 1 AC8 7 SER B 387 ILE B 388 ASP B 389 ALA B 395 SITE 2 AC8 7 GLY B 398 ASN B 399 MAN B 541 SITE 1 AC9 1 NAG B 540 SITE 1 BC1 3 ASP B 389 ASN B 406 THR B 409 SITE 1 BC2 8 ASN C 280 GLY C 289 THR C 290 ALA C 293 SITE 2 BC2 8 THR C 391 PRO C 393 MAN C 639 HOH C 648 SITE 1 BC3 2 ALA C 291 NDG C 638 SITE 1 BC4 7 SER C 387 ILE C 388 ASP C 389 ALA C 395 SITE 2 BC4 7 GLY C 398 ASN C 399 MAN C 641 SITE 1 BC5 1 NAG C 640 SITE 1 BC6 4 ASP C 389 THR C 391 ASN C 406 THR C 409 SITE 1 BC7 8 ASN D 280 GLY D 289 THR D 290 ALA D 293 SITE 2 BC7 8 THR D 391 PRO D 393 MAN D 739 HOH D 747 SITE 1 BC8 2 ALA D 291 NDG D 738 SITE 1 BC9 7 SER D 387 ILE D 388 ASP D 389 ALA D 395 SITE 2 BC9 7 GLY D 398 ASN D 399 MAN D 741 SITE 1 CC1 1 NAG D 740 SITE 1 CC2 4 ASP D 389 THR D 391 ASN D 406 THR D 409 SITE 1 CC3 3 LEU A 320 CYS A 369 ILE A 374 SITE 1 CC4 4 SER A 242 CYS A 386 ASN A 406 THR A 409 SITE 1 CC5 3 LEU B 320 CYS B 369 ILE B 374 SITE 1 CC6 4 SER B 242 CYS B 386 ASN B 406 THR B 409 SITE 1 CC7 3 LEU C 320 CYS C 369 ILE C 374 SITE 1 CC8 4 SER C 242 CYS C 386 ASN C 406 THR C 409 SITE 1 CC9 3 LEU D 320 CYS D 369 ILE D 374 SITE 1 DC1 5 PRO D 241 SER D 242 CYS D 386 ASN D 406 SITE 2 DC1 5 THR D 409 CRYST1 188.792 188.792 188.792 90.00 90.00 90.00 P 21 3 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005297 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005297 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005297 0.00000