HEADER HYDROLASE 22-JUL-02 1M7J TITLE CRYSTAL STRUCTURE OF D-AMINOACYLASE DEFINES A NOVEL SUBSET OF TITLE 2 AMIDOHYDROLASES COMPND MOL_ID: 1; COMPND 2 MOLECULE: D-AMINOACYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: N-ACYL-D-AMINO ACID AMIDOHYDROLASE; COMPND 5 EC: 3.5.1.81; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ALCALIGENES FAECALIS; SOURCE 3 ORGANISM_TAXID: 511; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: M15; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PQE KEYWDS TIN-BARREL, METAL-DEPENDENT AMIDOHYDROLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.-H.LIAW,S.-J.CHEN,T.-P.KO,C.-S.HSU,A.H.-J.WANG,Y.-C.TSAI REVDAT 4 13-MAR-24 1M7J 1 REMARK LINK REVDAT 3 11-OCT-17 1M7J 1 REMARK REVDAT 2 24-FEB-09 1M7J 1 VERSN REVDAT 1 25-FEB-03 1M7J 0 JRNL AUTH S.-H.LIAW,S.-J.CHEN,T.-P.KO,C.-S.HSU,C.J.CHEN,A.H.WANG, JRNL AUTH 2 Y.-C.TSAI JRNL TITL CRYSTAL STRUCTURE OF D-AMINOACYLASE FROM ALCALIGENES JRNL TITL 2 FAECALIS DA1. A NOVEL SUBSET OF AMIDOHYDROLASES AND INSIGHTS JRNL TITL 3 INTO THE ENZYME MECHANISM. JRNL REF J.BIOL.CHEM. V. 278 4957 2003 JRNL REFN ISSN 0021-9258 JRNL PMID 12454005 JRNL DOI 10.1074/JBC.M210795200 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.-S.HSU,W.-L.LAI,W.-W.CHANG,S.-H.LIAW,Y.-C.TSAI REMARK 1 TITL STRUCTURAL-BASED MUTATIONAL ANALYSIS OF D-AMINOACYLASE FROM REMARK 1 TITL 2 ALCALIGENES FAECALIS DA1. REMARK 1 REF PROTEIN SCI. V. 11 2545 2002 REMARK 1 REFN ISSN 0961-8368 REMARK 1 DOI 10.1110/PS.0220902 REMARK 1 REFERENCE 2 REMARK 1 AUTH C.-S.HSU,S.-J.CHEN,Y.-C.TSAI,T.-W.LIN,S.-H.LIAW,A.H.WANG REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY CRYSTALLOGRAPHIC ANALYSIS OF REMARK 1 TITL 2 A D-AMINOACYLASE FROM ALCALIGENES FAECALIS DA1 REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 58 1482 2002 REMARK 1 REFN ISSN 0907-4449 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 100057 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.174 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 5056 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.55 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1590 REMARK 3 BIN FREE R VALUE : 0.1730 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3589 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 503 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.13 REMARK 3 ESD FROM SIGMAA (A) : -0.0 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.15 REMARK 3 ESD FROM C-V SIGMAA (A) : -0.05 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.015 REMARK 3 BOND ANGLES (DEGREES) : 1.770 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1M7J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-JUL-02. REMARK 100 THE DEPOSITION ID IS D_1000016693. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-02; 05-MAR-02 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SPRING-8; PHOTON FACTORY REMARK 200 BEAMLINE : BL41XU; BL-18B REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.0; 0.9197 REMARK 200 MONOCHROMATOR : ROTATED-INCLINED DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4; ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 100783 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 50.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.11600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 17.60 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM CITRATE, AMMONIUM ACETATE, PEG REMARK 280 4000, PH 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.05100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.87200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.58350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.87200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.05100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.58350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THIS PROTEIN IS MONOMERIC. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 SER A 1 REMARK 465 GLN A 2 REMARK 465 PRO A 3 REMARK 465 ASP A 4 REMARK 465 ALA A 5 REMARK 465 THR A 6 REMARK 465 ALA A 481 REMARK 465 GLY A 482 REMARK 465 ALA A 483 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 480 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1306 O HOH A 1307 2.10 REMARK 500 O HOH A 1268 O HOH A 1269 2.14 REMARK 500 NZ LYS A 330 O HOH A 1191 2.18 REMARK 500 O HOH A 979 O HOH A 1339 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1223 O HOH A 1398 3555 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 51 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG A 152 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 MET A 362 CG - SD - CE ANGL. DEV. = 10.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 103 121.45 -171.49 REMARK 500 ARG A 160 40.94 -82.90 REMARK 500 HIS A 250 63.22 35.12 REMARK 500 PRO A 284 49.25 -85.72 REMARK 500 THR A 290 -161.35 -172.86 REMARK 500 THR A 406 -87.24 -139.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 802 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 67 CE1 REMARK 620 2 HIS A 67 NE2 28.0 REMARK 620 3 HIS A 69 NE2 105.1 127.7 REMARK 620 4 CYS A 96 SG 107.7 80.3 141.6 REMARK 620 5 ACT A 901 OXT 103.5 112.5 95.7 95.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 801 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 96 SG REMARK 620 2 HIS A 220 ND1 121.4 REMARK 620 3 HIS A 250 NE2 114.2 94.0 REMARK 620 4 ACT A 901 O 110.1 93.7 121.6 REMARK 620 5 ACT A 901 OXT 92.3 141.6 87.4 54.4 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 902 DBREF 1M7J A 0 483 UNP Q9AGH8 Q9AGH8_ALCFA 1 484 SEQRES 1 A 484 MET SER GLN PRO ASP ALA THR PRO PHE ASP TYR ILE LEU SEQRES 2 A 484 SER GLY GLY THR VAL ILE ASP GLY THR ASN ALA PRO GLY SEQRES 3 A 484 ARG LEU ALA ASP VAL GLY VAL ARG GLY ASP ARG ILE ALA SEQRES 4 A 484 ALA VAL GLY ASP LEU SER ALA SER SER ALA ARG ARG ARG SEQRES 5 A 484 ILE ASP VAL ALA GLY LYS VAL VAL SER PRO GLY PHE ILE SEQRES 6 A 484 ASP SER HIS THR HIS ASP ASP ASN TYR LEU LEU LYS HIS SEQRES 7 A 484 ARG ASP MET THR PRO LYS ILE SER GLN GLY VAL THR THR SEQRES 8 A 484 VAL VAL THR GLY ASN CYS GLY ILE SER LEU ALA PRO LEU SEQRES 9 A 484 ALA HIS ALA ASN PRO PRO ALA PRO LEU ASP LEU LEU ASP SEQRES 10 A 484 GLU GLY GLY SER PHE ARG PHE ALA ARG PHE SER ASP TYR SEQRES 11 A 484 LEU GLU ALA LEU ARG ALA ALA PRO PRO ALA VAL ASN ALA SEQRES 12 A 484 ALA CYS MET VAL GLY HIS SER THR LEU ARG ALA ALA VAL SEQRES 13 A 484 MET PRO ASP LEU ARG ARG GLU ALA THR ALA ASP GLU ILE SEQRES 14 A 484 GLN ALA MET GLN ALA LEU ALA ASP ASP ALA LEU ALA SER SEQRES 15 A 484 GLY ALA ILE GLY ILE SER THR GLY ALA PHE TYR PRO PRO SEQRES 16 A 484 ALA ALA HIS ALA SER THR GLU GLU ILE ILE GLU VAL CYS SEQRES 17 A 484 ARG PRO LEU ILE THR HIS GLY GLY VAL TYR ALA THR HIS SEQRES 18 A 484 MET ARG ASP GLU GLY GLU HIS ILE VAL GLN ALA LEU GLU SEQRES 19 A 484 GLU THR PHE ARG ILE GLY ARG GLU LEU ASP VAL PRO VAL SEQRES 20 A 484 VAL ILE SER HIS HIS LYS VAL MET GLY LYS LEU ASN PHE SEQRES 21 A 484 GLY ARG SER LYS GLU THR LEU ALA LEU ILE GLU ALA ALA SEQRES 22 A 484 MET ALA SER GLN ASP VAL SER LEU ASP ALA TYR PRO TYR SEQRES 23 A 484 VAL ALA GLY SER THR MET LEU LYS GLN ASP ARG VAL LEU SEQRES 24 A 484 LEU ALA GLY ARG THR LEU ILE THR TRP CYS LYS PRO TYR SEQRES 25 A 484 PRO GLU LEU SER GLY ARG ASP LEU GLU GLU ILE ALA ALA SEQRES 26 A 484 GLU ARG GLY LYS SER LYS TYR ASP VAL VAL PRO GLU LEU SEQRES 27 A 484 GLN PRO ALA GLY ALA ILE TYR PHE MET MET ASP GLU PRO SEQRES 28 A 484 ASP VAL GLN ARG ILE LEU ALA PHE GLY PRO THR MET ILE SEQRES 29 A 484 GLY SER ASP GLY LEU PRO HIS ASP GLU ARG PRO HIS PRO SEQRES 30 A 484 ARG LEU TRP GLY THR PHE PRO ARG VAL LEU GLY HIS TYR SEQRES 31 A 484 SER ARG ASP LEU GLY LEU PHE PRO LEU GLU THR ALA VAL SEQRES 32 A 484 TRP LYS MET THR GLY LEU THR ALA ALA LYS PHE GLY LEU SEQRES 33 A 484 ALA GLU ARG GLY GLN VAL GLN PRO GLY TYR TYR ALA ASP SEQRES 34 A 484 LEU VAL VAL PHE ASP PRO ALA THR VAL ALA ASP SER ALA SEQRES 35 A 484 THR PHE GLU HIS PRO THR GLU ARG ALA ALA GLY ILE HIS SEQRES 36 A 484 SER VAL TYR VAL ASN GLY ALA ALA VAL TRP GLU ASP GLN SEQRES 37 A 484 SER PHE THR GLY GLN HIS ALA GLY ARG VAL LEU ASN ARG SEQRES 38 A 484 ALA GLY ALA HET ZN A 801 1 HET ZN A 802 1 HET ACT A 901 4 HET ACT A 902 4 HETNAM ZN ZINC ION HETNAM ACT ACETATE ION FORMUL 2 ZN 2(ZN 2+) FORMUL 4 ACT 2(C2 H3 O2 1-) FORMUL 6 HOH *503(H2 O) HELIX 1 1 ASN A 72 HIS A 77 1 6 HELIX 2 2 MET A 80 SER A 85 1 6 HELIX 3 3 PRO A 111 ASP A 116 5 6 HELIX 4 4 ARG A 125 ALA A 136 1 12 HELIX 5 5 HIS A 148 MET A 156 1 9 HELIX 6 6 THR A 164 GLY A 182 1 19 HELIX 7 7 TYR A 192 ALA A 196 5 5 HELIX 8 8 SER A 199 ARG A 208 1 10 HELIX 9 9 ARG A 208 GLY A 214 1 7 HELIX 10 10 HIS A 227 ASP A 243 1 17 HELIX 11 11 GLY A 255 PHE A 259 5 5 HELIX 12 12 ARG A 261 GLN A 276 1 16 HELIX 13 13 TYR A 311 SER A 315 5 5 HELIX 14 14 ASP A 318 ARG A 326 1 9 HELIX 15 15 SER A 329 GLN A 338 1 10 HELIX 16 16 ASP A 348 PHE A 358 1 11 HELIX 17 17 PRO A 376 GLY A 387 1 12 HELIX 18 18 PRO A 397 LYS A 404 1 8 HELIX 19 19 THR A 406 GLY A 414 1 9 SHEET 1 A 4 ARG A 36 GLY A 41 0 SHEET 2 A 4 ASP A 29 ARG A 33 -1 N ASP A 29 O GLY A 41 SHEET 3 A 4 TYR A 10 SER A 13 -1 N LEU A 12 O VAL A 30 SHEET 4 A 4 ARG A 51 ASP A 53 1 O ILE A 52 N SER A 13 SHEET 1 B 7 ARG A 26 LEU A 27 0 SHEET 2 B 7 THR A 16 VAL A 17 -1 N VAL A 17 O ARG A 26 SHEET 3 B 7 VAL A 58 PRO A 61 1 O VAL A 59 N THR A 16 SHEET 4 B 7 LEU A 429 PHE A 432 -1 O PHE A 432 N VAL A 58 SHEET 5 B 7 ILE A 453 VAL A 458 -1 O TYR A 457 N LEU A 429 SHEET 6 B 7 ALA A 461 GLU A 465 -1 O VAL A 463 N VAL A 456 SHEET 7 B 7 SER A 468 PHE A 469 -1 O SER A 468 N GLU A 465 SHEET 1 C 8 PHE A 63 ASP A 65 0 SHEET 2 C 8 VAL A 88 THR A 93 1 O THR A 90 N ASP A 65 SHEET 3 C 8 ASN A 141 GLY A 147 1 O ALA A 143 N VAL A 91 SHEET 4 C 8 GLY A 185 GLY A 189 1 O GLY A 185 N VAL A 146 SHEET 5 C 8 VAL A 216 HIS A 220 1 O HIS A 220 N THR A 188 SHEET 6 C 8 VAL A 246 ILE A 248 1 O VAL A 247 N THR A 219 SHEET 7 C 8 VAL A 278 ALA A 282 1 O SER A 279 N ILE A 248 SHEET 8 C 8 THR A 361 ILE A 363 1 O MET A 362 N LEU A 280 SHEET 1 D 2 LEU A 103 ALA A 104 0 SHEET 2 D 2 ARG A 122 PHE A 123 -1 O PHE A 123 N LEU A 103 SHEET 1 E 3 GLY A 288 MET A 291 0 SHEET 2 E 3 ALA A 340 TYR A 344 -1 O TYR A 344 N GLY A 288 SHEET 3 E 3 THR A 303 CYS A 308 -1 N TRP A 307 O GLY A 341 LINK CE1 HIS A 67 ZN ZN A 802 1555 1555 2.00 LINK NE2 HIS A 67 ZN ZN A 802 1555 1555 2.69 LINK NE2 HIS A 69 ZN ZN A 802 1555 1555 1.87 LINK SG CYS A 96 ZN ZN A 801 1555 1555 2.24 LINK SG CYS A 96 ZN ZN A 802 1555 1555 2.25 LINK ND1 HIS A 220 ZN ZN A 801 1555 1555 2.08 LINK NE2 HIS A 250 ZN ZN A 801 1555 1555 2.04 LINK ZN ZN A 801 O ACT A 901 1555 1555 2.04 LINK ZN ZN A 801 OXT ACT A 901 1555 1555 2.59 LINK ZN ZN A 802 OXT ACT A 901 1555 1555 2.46 CISPEP 1 ALA A 101 PRO A 102 0 -0.16 CISPEP 2 ALA A 110 PRO A 111 0 1.30 CISPEP 3 GLN A 338 PRO A 339 0 -0.63 SITE 1 AC1 5 CYS A 96 HIS A 220 HIS A 250 ZN A 802 SITE 2 AC1 5 ACT A 901 SITE 1 AC2 6 HIS A 67 HIS A 69 CYS A 96 ASP A 366 SITE 2 AC2 6 ZN A 801 ACT A 901 SITE 1 AC3 12 HIS A 67 HIS A 69 CYS A 96 TYR A 192 SITE 2 AC3 12 HIS A 220 HIS A 250 SER A 289 THR A 290 SITE 3 AC3 12 ASP A 366 ZN A 801 ZN A 802 ACT A 902 SITE 1 AC4 7 LYS A 252 TYR A 283 GLY A 288 SER A 289 SITE 2 AC4 7 ASP A 366 ARG A 377 ACT A 901 CRYST1 60.102 77.167 135.744 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016638 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012959 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007367 0.00000