HEADER RNA BINDING PROTEIN/RNA 26-JUL-02 1M8V TITLE STRUCTURE OF PYROCOCCUS ABYSSII SM PROTEIN IN COMPLEX WITH A URIDINE TITLE 2 HEPTAMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-R(P*UP*UP*UP*UP*UP*UP*U)-3'; COMPND 3 CHAIN: O, P, Q, R, S, T, U; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PUTATIVE SNRNP SM-LIKE PROTEIN; COMPND 7 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L, M, N; COMPND 8 SYNONYM: SM PROTEIN PA-SM1; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 ORGANISM_SCIENTIFIC: PYROCOCCUS ABYSSI; SOURCE 5 ORGANISM_TAXID: 29292; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: DE3; SOURCE 9 EXPRESSION_SYSTEM_ORGANELLE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PET24 KEYWDS PROTEIN-RNA COMPLEX, SM PROTEIN, RNA BINDING PROTEIN-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.THORE,C.MAYER,C.SAUTER,S.WEEKS,D.SUCK REVDAT 6 16-OCT-24 1M8V 1 REMARK HET HETNAM FORMUL REVDAT 6 2 1 SITE ATOM REVDAT 5 14-FEB-24 1M8V 1 REMARK REVDAT 4 31-JAN-18 1M8V 1 REMARK REVDAT 3 24-FEB-09 1M8V 1 VERSN REVDAT 2 18-FEB-03 1M8V 1 SOURCE REVDAT 1 11-FEB-03 1M8V 0 JRNL AUTH S.THORE,C.MAYER,C.SAUTER,S.WEEKS,D.SUCK JRNL TITL CRYSTAL STRUCTURE OF PYROCOCCUS ABYSSII SM CORE AND ITS JRNL TITL 2 COMPLEX WITH RNA: COMMON FEATURES OF RNA-BINDING IN ARCHAEA JRNL TITL 3 AND EUKARYA JRNL REF J.BIOL.CHEM. V. 278 1239 2003 JRNL REFN ISSN 0021-9258 JRNL PMID 12409299 JRNL DOI 10.1074/JBC.M207685200 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 90.5 REMARK 3 NUMBER OF REFLECTIONS : 37042 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.500 REMARK 3 FREE R VALUE TEST SET COUNT : 1862 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7915 REMARK 3 NUCLEIC ACID ATOMS : 820 REMARK 3 HETEROGEN ATOMS : 287 REMARK 3 SOLVENT ATOMS : 205 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.93000 REMARK 3 B22 (A**2) : 0.49000 REMARK 3 B33 (A**2) : -8.42000 REMARK 3 B12 (A**2) : -6.55000 REMARK 3 B13 (A**2) : -8.60000 REMARK 3 B23 (A**2) : -8.58000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM SIGMAA (A) : 0.28 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.44 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.45 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.013 REMARK 3 BOND ANGLES (DEGREES) : 1.650 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.11 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.260 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1M8V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-AUG-02. REMARK 100 THE DEPOSITION ID IS D_1000016741. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-NOV-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.915 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37089 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 29.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1H64 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 1000, IMIDAZOLE PH8.0, CALCIUM REMARK 280 ACETATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 4.0K, REMARK 280 TEMPERATURE 277.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 21-MERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: O, P, Q, R, S, T, U, A, B, C, REMARK 350 AND CHAINS: D, E, F, G, H, I, J, K, L, REMARK 350 AND CHAINS: M, N REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 U O 7 REMARK 465 U P 7 REMARK 465 U Q 7 REMARK 465 U R 7 REMARK 465 U S 7 REMARK 465 U T 6 REMARK 465 U T 7 REMARK 465 U U 7 REMARK 465 GLY A 99 REMARK 465 ALA A 100 REMARK 465 MET A 101 REMARK 465 GLU A 174 REMARK 465 GLU A 175 REMARK 465 GLY B 199 REMARK 465 ALA B 200 REMARK 465 MET B 201 REMARK 465 ALA B 202 REMARK 465 GLU B 274 REMARK 465 GLU B 275 REMARK 465 GLY C 299 REMARK 465 ALA C 300 REMARK 465 MET C 301 REMARK 465 ALA C 302 REMARK 465 GLU C 374 REMARK 465 GLU C 375 REMARK 465 GLY D 399 REMARK 465 ALA D 400 REMARK 465 MET D 401 REMARK 465 ALA D 402 REMARK 465 GLU D 474 REMARK 465 GLU D 475 REMARK 465 GLY E 499 REMARK 465 ALA E 500 REMARK 465 MET E 501 REMARK 465 ALA E 502 REMARK 465 GLU E 574 REMARK 465 GLU E 575 REMARK 465 GLY F 599 REMARK 465 ALA F 600 REMARK 465 MET F 601 REMARK 465 ALA F 602 REMARK 465 GLU F 674 REMARK 465 GLU F 675 REMARK 465 GLY G 699 REMARK 465 ALA G 700 REMARK 465 MET G 701 REMARK 465 ALA G 702 REMARK 465 GLU G 774 REMARK 465 GLU G 775 REMARK 465 GLY H 99 REMARK 465 ALA H 100 REMARK 465 MET H 101 REMARK 465 ALA H 102 REMARK 465 GLU H 174 REMARK 465 GLU H 175 REMARK 465 GLY I 199 REMARK 465 ALA I 200 REMARK 465 MET I 201 REMARK 465 ALA I 202 REMARK 465 GLU I 274 REMARK 465 GLU I 275 REMARK 465 GLY J 299 REMARK 465 ALA J 300 REMARK 465 MET J 301 REMARK 465 ALA J 302 REMARK 465 GLU J 374 REMARK 465 GLU J 375 REMARK 465 GLY K 399 REMARK 465 ALA K 400 REMARK 465 MET K 401 REMARK 465 ALA K 402 REMARK 465 GLU K 474 REMARK 465 GLU K 475 REMARK 465 GLY L 499 REMARK 465 ALA L 500 REMARK 465 MET L 501 REMARK 465 ALA L 502 REMARK 465 GLU L 574 REMARK 465 GLU L 575 REMARK 465 GLY M 599 REMARK 465 ALA M 600 REMARK 465 MET M 601 REMARK 465 ALA M 602 REMARK 465 GLU M 674 REMARK 465 GLU M 675 REMARK 465 GLY N 699 REMARK 465 ALA N 700 REMARK 465 MET N 701 REMARK 465 ALA N 702 REMARK 465 GLU N 774 REMARK 465 GLU N 775 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU I 203 NH1 ARG I 211 1.54 REMARK 500 NZ LYS H 122 OD1 ASP I 265 1.80 REMARK 500 NH1 ARG N 711 O HOH N 192 1.86 REMARK 500 OE1 GLU F 603 NH2 ARG F 611 1.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 U P 1 C3' - O3' - P ANGL. DEV. = 8.4 DEGREES REMARK 500 U P 2 C3' - O3' - P ANGL. DEV. = -33.3 DEGREES REMARK 500 U P 3 O3' - P - O5' ANGL. DEV. = 16.3 DEGREES REMARK 500 U P 3 O5' - P - OP1 ANGL. DEV. = -6.5 DEGREES REMARK 500 U P 3 O5' - P - OP2 ANGL. DEV. = -16.5 DEGREES REMARK 500 U P 6 O3' - P - O5' ANGL. DEV. = -12.2 DEGREES REMARK 500 U P 6 O3' - P - OP2 ANGL. DEV. = 9.3 DEGREES REMARK 500 PRO I 205 CA - N - CD ANGL. DEV. = -9.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 103 99.53 12.86 REMARK 500 LYS A 123 -70.92 -41.09 REMARK 500 TYR B 234 -177.22 -173.28 REMARK 500 LYS C 323 -71.70 -53.99 REMARK 500 PHE C 325 -167.90 -78.98 REMARK 500 LYS D 423 -92.23 -28.64 REMARK 500 LEU E 538 12.21 82.30 REMARK 500 ARG E 563 10.71 -70.00 REMARK 500 ASP F 614 32.85 73.38 REMARK 500 LEU F 638 31.59 84.23 REMARK 500 GLN F 649 -78.74 -89.84 REMARK 500 ASP F 650 68.76 -111.95 REMARK 500 LYS G 723 0.69 -62.97 REMARK 500 LYS H 123 -165.47 -60.28 REMARK 500 LEU I 238 26.34 80.79 REMARK 500 LEU J 338 21.23 86.19 REMARK 500 LYS K 423 -81.64 -45.89 REMARK 500 PHE K 425 -157.39 -101.77 REMARK 500 LYS L 523 3.68 -61.02 REMARK 500 TYR L 534 178.18 177.31 REMARK 500 LEU L 538 12.70 84.68 REMARK 500 ASP L 550 8.69 57.97 REMARK 500 TYR M 634 -171.76 -174.34 REMARK 500 LEU M 638 12.32 84.82 REMARK 500 PHE N 725 -163.36 -104.55 REMARK 500 TYR N 734 -179.57 -173.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 U O 6 0.06 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH I 427 DISTANCE = 6.18 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 U5P A 410 REMARK 610 U5P B 411 REMARK 610 U5P C 412 REMARK 610 U5P D 476 REMARK 610 U5P E 414 REMARK 610 U5P F 415 REMARK 610 U5P G 416 REMARK 610 U5P H 417 REMARK 610 U5P I 418 REMARK 610 U5P J 419 REMARK 610 U5P K 476 REMARK 610 U5P L 421 REMARK 610 U5P M 422 REMARK 610 U5P M 423 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA O 310 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U O 2 OP2 REMARK 620 2 U O 3 OP2 100.6 REMARK 620 3 U O 5 OP2 104.7 79.4 REMARK 620 4 U O 6 OP1 68.2 124.2 54.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA P 330 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U P 2 OP2 REMARK 620 2 U P 3 OP1 120.7 REMARK 620 3 U P 5 OP2 127.5 80.5 REMARK 620 4 U P 6 OP1 67.3 169.2 88.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA Q 380 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U Q 2 OP2 REMARK 620 2 U Q 3 OP2 112.9 REMARK 620 3 U Q 5 OP2 116.5 61.1 REMARK 620 4 U Q 6 OP1 61.8 121.0 70.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA R 390 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U R 2 OP2 REMARK 620 2 U R 2 O5' 60.9 REMARK 620 3 U R 3 OP2 128.6 68.5 REMARK 620 4 U R 5 OP2 147.0 132.0 76.9 REMARK 620 5 U R 6 OP1 73.6 120.6 146.4 74.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA S 340 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U S 2 OP2 REMARK 620 2 U S 5 OP2 125.5 REMARK 620 3 U S 5 O5' 119.1 55.6 REMARK 620 4 U S 6 OP1 68.8 107.7 58.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA T 320 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U T 2 OP2 REMARK 620 2 U T 5 OP2 106.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA U 370 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U U 2 OP2 REMARK 620 2 U U 3 OP2 92.1 REMARK 620 3 U U 5 OP2 105.6 55.2 REMARK 620 4 U U 6 OP1 70.9 120.7 74.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA O 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA T 320 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA P 330 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA S 340 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA U 370 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA Q 380 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA R 390 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE U5P A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE U5P B 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE U5P C 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE U5P D 476 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE U5P E 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE U5P F 415 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE U5P G 416 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE U5P H 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE U5P I 418 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE U5P J 419 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE U5P K 476 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE U5P L 421 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE U5P M 422 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE U5P M 423 DBREF 1M8V A 101 175 UNP Q9V0Y8 RUXX_PYRAB 1 75 DBREF 1M8V B 201 275 UNP Q9V0Y8 RUXX_PYRAB 1 75 DBREF 1M8V C 301 375 UNP Q9V0Y8 RUXX_PYRAB 1 75 DBREF 1M8V D 401 475 UNP Q9V0Y8 RUXX_PYRAB 1 75 DBREF 1M8V E 501 575 UNP Q9V0Y8 RUXX_PYRAB 1 75 DBREF 1M8V F 601 675 UNP Q9V0Y8 RUXX_PYRAB 1 75 DBREF 1M8V G 701 775 UNP Q9V0Y8 RUXX_PYRAB 1 75 DBREF 1M8V H 101 175 UNP Q9V0Y8 RUXX_PYRAB 1 75 DBREF 1M8V I 201 275 UNP Q9V0Y8 RUXX_PYRAB 1 75 DBREF 1M8V J 301 375 UNP Q9V0Y8 RUXX_PYRAB 1 75 DBREF 1M8V K 401 475 UNP Q9V0Y8 RUXX_PYRAB 1 75 DBREF 1M8V L 501 575 UNP Q9V0Y8 RUXX_PYRAB 1 75 DBREF 1M8V M 601 675 UNP Q9V0Y8 RUXX_PYRAB 1 75 DBREF 1M8V N 701 775 UNP Q9V0Y8 RUXX_PYRAB 1 75 DBREF 1M8V O 1 7 PDB 1M8V 1M8V 1 7 DBREF 1M8V P 1 7 PDB 1M8V 1M8V 1 7 DBREF 1M8V Q 1 7 PDB 1M8V 1M8V 1 7 DBREF 1M8V R 1 7 PDB 1M8V 1M8V 1 7 DBREF 1M8V S 1 7 PDB 1M8V 1M8V 1 7 DBREF 1M8V T 1 7 PDB 1M8V 1M8V 1 7 DBREF 1M8V U 1 7 PDB 1M8V 1M8V 1 7 SEQADV 1M8V GLY A 99 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V ALA A 102 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V GLY B 199 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V ALA B 202 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V GLY C 299 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V ALA C 302 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V GLY D 399 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V ALA D 402 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V GLY E 499 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V ALA E 502 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V GLY F 599 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V ALA F 602 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V GLY G 699 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V ALA G 702 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V GLY H 99 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V ALA H 102 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V GLY I 199 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V ALA I 202 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V GLY J 299 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V ALA J 302 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V GLY K 399 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V ALA K 402 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V GLY L 499 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V ALA L 502 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V GLY M 599 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V ALA M 602 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V GLY N 699 UNP Q9V0Y8 CLONING ARTIFACT SEQADV 1M8V ALA N 702 UNP Q9V0Y8 CLONING ARTIFACT SEQRES 1 O 7 U U U U U U U SEQRES 1 P 7 U U U U U U U SEQRES 1 Q 7 U U U U U U U SEQRES 1 R 7 U U U U U U U SEQRES 1 S 7 U U U U U U U SEQRES 1 T 7 U U U U U U U SEQRES 1 U 7 U U U U U U U SEQRES 1 A 77 GLY ALA MET ALA GLU ARG PRO LEU ASP VAL ILE HIS ARG SEQRES 2 A 77 SER LEU ASP LYS ASP VAL LEU VAL ILE LEU LYS LYS GLY SEQRES 3 A 77 PHE GLU PHE ARG GLY ARG LEU ILE GLY TYR ASP ILE HIS SEQRES 4 A 77 LEU ASN VAL VAL LEU ALA ASP ALA GLU MET ILE GLN ASP SEQRES 5 A 77 GLY GLU VAL VAL LYS ARG TYR GLY LYS ILE VAL ILE ARG SEQRES 6 A 77 GLY ASP ASN VAL LEU ALA ILE SER PRO THR GLU GLU SEQRES 1 B 77 GLY ALA MET ALA GLU ARG PRO LEU ASP VAL ILE HIS ARG SEQRES 2 B 77 SER LEU ASP LYS ASP VAL LEU VAL ILE LEU LYS LYS GLY SEQRES 3 B 77 PHE GLU PHE ARG GLY ARG LEU ILE GLY TYR ASP ILE HIS SEQRES 4 B 77 LEU ASN VAL VAL LEU ALA ASP ALA GLU MET ILE GLN ASP SEQRES 5 B 77 GLY GLU VAL VAL LYS ARG TYR GLY LYS ILE VAL ILE ARG SEQRES 6 B 77 GLY ASP ASN VAL LEU ALA ILE SER PRO THR GLU GLU SEQRES 1 C 77 GLY ALA MET ALA GLU ARG PRO LEU ASP VAL ILE HIS ARG SEQRES 2 C 77 SER LEU ASP LYS ASP VAL LEU VAL ILE LEU LYS LYS GLY SEQRES 3 C 77 PHE GLU PHE ARG GLY ARG LEU ILE GLY TYR ASP ILE HIS SEQRES 4 C 77 LEU ASN VAL VAL LEU ALA ASP ALA GLU MET ILE GLN ASP SEQRES 5 C 77 GLY GLU VAL VAL LYS ARG TYR GLY LYS ILE VAL ILE ARG SEQRES 6 C 77 GLY ASP ASN VAL LEU ALA ILE SER PRO THR GLU GLU SEQRES 1 D 77 GLY ALA MET ALA GLU ARG PRO LEU ASP VAL ILE HIS ARG SEQRES 2 D 77 SER LEU ASP LYS ASP VAL LEU VAL ILE LEU LYS LYS GLY SEQRES 3 D 77 PHE GLU PHE ARG GLY ARG LEU ILE GLY TYR ASP ILE HIS SEQRES 4 D 77 LEU ASN VAL VAL LEU ALA ASP ALA GLU MET ILE GLN ASP SEQRES 5 D 77 GLY GLU VAL VAL LYS ARG TYR GLY LYS ILE VAL ILE ARG SEQRES 6 D 77 GLY ASP ASN VAL LEU ALA ILE SER PRO THR GLU GLU SEQRES 1 E 77 GLY ALA MET ALA GLU ARG PRO LEU ASP VAL ILE HIS ARG SEQRES 2 E 77 SER LEU ASP LYS ASP VAL LEU VAL ILE LEU LYS LYS GLY SEQRES 3 E 77 PHE GLU PHE ARG GLY ARG LEU ILE GLY TYR ASP ILE HIS SEQRES 4 E 77 LEU ASN VAL VAL LEU ALA ASP ALA GLU MET ILE GLN ASP SEQRES 5 E 77 GLY GLU VAL VAL LYS ARG TYR GLY LYS ILE VAL ILE ARG SEQRES 6 E 77 GLY ASP ASN VAL LEU ALA ILE SER PRO THR GLU GLU SEQRES 1 F 77 GLY ALA MET ALA GLU ARG PRO LEU ASP VAL ILE HIS ARG SEQRES 2 F 77 SER LEU ASP LYS ASP VAL LEU VAL ILE LEU LYS LYS GLY SEQRES 3 F 77 PHE GLU PHE ARG GLY ARG LEU ILE GLY TYR ASP ILE HIS SEQRES 4 F 77 LEU ASN VAL VAL LEU ALA ASP ALA GLU MET ILE GLN ASP SEQRES 5 F 77 GLY GLU VAL VAL LYS ARG TYR GLY LYS ILE VAL ILE ARG SEQRES 6 F 77 GLY ASP ASN VAL LEU ALA ILE SER PRO THR GLU GLU SEQRES 1 G 77 GLY ALA MET ALA GLU ARG PRO LEU ASP VAL ILE HIS ARG SEQRES 2 G 77 SER LEU ASP LYS ASP VAL LEU VAL ILE LEU LYS LYS GLY SEQRES 3 G 77 PHE GLU PHE ARG GLY ARG LEU ILE GLY TYR ASP ILE HIS SEQRES 4 G 77 LEU ASN VAL VAL LEU ALA ASP ALA GLU MET ILE GLN ASP SEQRES 5 G 77 GLY GLU VAL VAL LYS ARG TYR GLY LYS ILE VAL ILE ARG SEQRES 6 G 77 GLY ASP ASN VAL LEU ALA ILE SER PRO THR GLU GLU SEQRES 1 H 77 GLY ALA MET ALA GLU ARG PRO LEU ASP VAL ILE HIS ARG SEQRES 2 H 77 SER LEU ASP LYS ASP VAL LEU VAL ILE LEU LYS LYS GLY SEQRES 3 H 77 PHE GLU PHE ARG GLY ARG LEU ILE GLY TYR ASP ILE HIS SEQRES 4 H 77 LEU ASN VAL VAL LEU ALA ASP ALA GLU MET ILE GLN ASP SEQRES 5 H 77 GLY GLU VAL VAL LYS ARG TYR GLY LYS ILE VAL ILE ARG SEQRES 6 H 77 GLY ASP ASN VAL LEU ALA ILE SER PRO THR GLU GLU SEQRES 1 I 77 GLY ALA MET ALA GLU ARG PRO LEU ASP VAL ILE HIS ARG SEQRES 2 I 77 SER LEU ASP LYS ASP VAL LEU VAL ILE LEU LYS LYS GLY SEQRES 3 I 77 PHE GLU PHE ARG GLY ARG LEU ILE GLY TYR ASP ILE HIS SEQRES 4 I 77 LEU ASN VAL VAL LEU ALA ASP ALA GLU MET ILE GLN ASP SEQRES 5 I 77 GLY GLU VAL VAL LYS ARG TYR GLY LYS ILE VAL ILE ARG SEQRES 6 I 77 GLY ASP ASN VAL LEU ALA ILE SER PRO THR GLU GLU SEQRES 1 J 77 GLY ALA MET ALA GLU ARG PRO LEU ASP VAL ILE HIS ARG SEQRES 2 J 77 SER LEU ASP LYS ASP VAL LEU VAL ILE LEU LYS LYS GLY SEQRES 3 J 77 PHE GLU PHE ARG GLY ARG LEU ILE GLY TYR ASP ILE HIS SEQRES 4 J 77 LEU ASN VAL VAL LEU ALA ASP ALA GLU MET ILE GLN ASP SEQRES 5 J 77 GLY GLU VAL VAL LYS ARG TYR GLY LYS ILE VAL ILE ARG SEQRES 6 J 77 GLY ASP ASN VAL LEU ALA ILE SER PRO THR GLU GLU SEQRES 1 K 77 GLY ALA MET ALA GLU ARG PRO LEU ASP VAL ILE HIS ARG SEQRES 2 K 77 SER LEU ASP LYS ASP VAL LEU VAL ILE LEU LYS LYS GLY SEQRES 3 K 77 PHE GLU PHE ARG GLY ARG LEU ILE GLY TYR ASP ILE HIS SEQRES 4 K 77 LEU ASN VAL VAL LEU ALA ASP ALA GLU MET ILE GLN ASP SEQRES 5 K 77 GLY GLU VAL VAL LYS ARG TYR GLY LYS ILE VAL ILE ARG SEQRES 6 K 77 GLY ASP ASN VAL LEU ALA ILE SER PRO THR GLU GLU SEQRES 1 L 77 GLY ALA MET ALA GLU ARG PRO LEU ASP VAL ILE HIS ARG SEQRES 2 L 77 SER LEU ASP LYS ASP VAL LEU VAL ILE LEU LYS LYS GLY SEQRES 3 L 77 PHE GLU PHE ARG GLY ARG LEU ILE GLY TYR ASP ILE HIS SEQRES 4 L 77 LEU ASN VAL VAL LEU ALA ASP ALA GLU MET ILE GLN ASP SEQRES 5 L 77 GLY GLU VAL VAL LYS ARG TYR GLY LYS ILE VAL ILE ARG SEQRES 6 L 77 GLY ASP ASN VAL LEU ALA ILE SER PRO THR GLU GLU SEQRES 1 M 77 GLY ALA MET ALA GLU ARG PRO LEU ASP VAL ILE HIS ARG SEQRES 2 M 77 SER LEU ASP LYS ASP VAL LEU VAL ILE LEU LYS LYS GLY SEQRES 3 M 77 PHE GLU PHE ARG GLY ARG LEU ILE GLY TYR ASP ILE HIS SEQRES 4 M 77 LEU ASN VAL VAL LEU ALA ASP ALA GLU MET ILE GLN ASP SEQRES 5 M 77 GLY GLU VAL VAL LYS ARG TYR GLY LYS ILE VAL ILE ARG SEQRES 6 M 77 GLY ASP ASN VAL LEU ALA ILE SER PRO THR GLU GLU SEQRES 1 N 77 GLY ALA MET ALA GLU ARG PRO LEU ASP VAL ILE HIS ARG SEQRES 2 N 77 SER LEU ASP LYS ASP VAL LEU VAL ILE LEU LYS LYS GLY SEQRES 3 N 77 PHE GLU PHE ARG GLY ARG LEU ILE GLY TYR ASP ILE HIS SEQRES 4 N 77 LEU ASN VAL VAL LEU ALA ASP ALA GLU MET ILE GLN ASP SEQRES 5 N 77 GLY GLU VAL VAL LYS ARG TYR GLY LYS ILE VAL ILE ARG SEQRES 6 N 77 GLY ASP ASN VAL LEU ALA ILE SER PRO THR GLU GLU HET CA O 310 1 HET CA P 330 1 HET CA Q 380 1 HET CA R 390 1 HET CA S 340 1 HET CA T 320 1 HET CA U 370 1 HET U5P A 410 20 HET U5P B 411 20 HET U5P C 412 20 HET U5P D 476 20 HET U5P E 414 20 HET U5P F 415 20 HET U5P G 416 20 HET U5P H 417 20 HET U5P I 418 20 HET U5P J 419 20 HET U5P K 476 20 HET U5P L 421 20 HET U5P M 422 20 HET U5P M 423 20 HETNAM CA CALCIUM ION HETNAM U5P URIDINE-5'-MONOPHOSPHATE FORMUL 22 CA 7(CA 2+) FORMUL 29 U5P 14(C9 H13 N2 O9 P) FORMUL 43 HOH *205(H2 O) HELIX 1 1 ARG A 104 SER A 112 1 9 HELIX 2 2 ARG B 204 SER B 212 1 9 HELIX 3 3 ARG C 304 SER C 312 1 9 HELIX 4 4 ARG D 404 SER D 412 1 9 HELIX 5 5 ARG E 504 SER E 512 1 9 HELIX 6 6 ARG F 604 SER F 612 1 9 HELIX 7 7 ARG G 704 SER G 712 1 9 HELIX 8 8 ARG H 104 SER H 112 1 9 HELIX 9 9 ARG I 204 SER I 212 1 9 HELIX 10 10 ARG J 304 SER J 312 1 9 HELIX 11 11 ARG K 404 ARG K 411 1 8 HELIX 12 12 ARG L 504 LEU L 513 1 10 HELIX 13 13 ARG M 604 SER M 612 1 9 HELIX 14 14 ARG N 704 ARG N 711 1 8 SHEET 1 A36 ASP A 116 LEU A 121 0 SHEET 2 A36 GLU A 126 TYR A 134 -1 O PHE A 127 N VAL A 119 SHEET 3 A36 VAL A 140 GLN A 149 -1 O VAL A 141 N GLY A 133 SHEET 4 A36 GLU A 152 ILE A 162 -1 O LYS A 155 N MET A 147 SHEET 5 A36 VAL G 767 PRO G 772 -1 O ILE G 770 N VAL A 161 SHEET 6 A36 LYS G 715 LEU G 721 -1 N ILE G 720 O LEU G 768 SHEET 7 A36 GLU G 726 TYR G 734 -1 O LEU G 731 N LYS G 715 SHEET 8 A36 VAL G 740 GLN G 749 -1 O VAL G 741 N GLY G 733 SHEET 9 A36 GLU G 752 ILE G 762 -1 O TYR G 757 N ALA G 745 SHEET 10 A36 VAL F 667 PRO F 672 -1 N ILE F 670 O VAL G 761 SHEET 11 A36 ASP F 616 LEU F 621 -1 N ILE F 620 O LEU F 668 SHEET 12 A36 GLU F 626 TYR F 634 -1 O PHE F 627 N VAL F 619 SHEET 13 A36 VAL F 640 ILE F 648 -1 O ILE F 648 N GLU F 626 SHEET 14 A36 VAL F 653 ILE F 662 -1 O ILE F 662 N VAL F 640 SHEET 15 A36 VAL E 567 PRO E 572 -1 N ILE E 570 O VAL F 661 SHEET 16 A36 ASP E 516 LEU E 521 -1 N ILE E 520 O LEU E 568 SHEET 17 A36 GLU E 526 TYR E 534 -1 O PHE E 527 N VAL E 519 SHEET 18 A36 VAL E 540 GLN E 549 -1 O ILE E 548 N GLU E 526 SHEET 19 A36 GLU E 552 ILE E 562 -1 O TYR E 557 N ALA E 545 SHEET 20 A36 VAL D 467 PRO D 472 -1 N ILE D 470 O VAL E 561 SHEET 21 A36 ASP D 416 LEU D 421 -1 N LEU D 418 O SER D 471 SHEET 22 A36 GLU D 426 TYR D 434 -1 O GLY D 429 N VAL D 417 SHEET 23 A36 VAL D 440 GLN D 449 -1 O ILE D 448 N GLU D 426 SHEET 24 A36 GLU D 452 ILE D 462 -1 O TYR D 457 N ALA D 445 SHEET 25 A36 VAL C 367 PRO C 372 -1 N ILE C 370 O VAL D 461 SHEET 26 A36 LYS C 315 LEU C 321 -1 N ILE C 320 O LEU C 368 SHEET 27 A36 GLU C 326 TYR C 334 -1 O LEU C 331 N LYS C 315 SHEET 28 A36 VAL C 340 GLN C 349 -1 O ILE C 348 N GLU C 326 SHEET 29 A36 GLU C 352 ILE C 362 -1 O TYR C 357 N ALA C 345 SHEET 30 A36 VAL B 267 PRO B 272 -1 N ILE B 270 O VAL C 361 SHEET 31 A36 ASP B 216 LEU B 221 -1 N ILE B 220 O LEU B 268 SHEET 32 A36 GLU B 226 TYR B 234 -1 O PHE B 227 N VAL B 219 SHEET 33 A36 VAL B 240 GLN B 249 -1 O ILE B 248 N GLU B 226 SHEET 34 A36 GLU B 252 ILE B 262 -1 O ILE B 262 N VAL B 240 SHEET 35 A36 VAL A 167 PRO A 172 -1 N ILE A 170 O VAL B 261 SHEET 36 A36 ASP A 116 LEU A 121 -1 N ILE A 120 O LEU A 168 SHEET 1 B36 ASP H 116 LEU H 121 0 SHEET 2 B36 PHE H 125 TYR H 134 -1 O PHE H 127 N VAL H 119 SHEET 3 B36 VAL H 140 GLN H 149 -1 O ILE H 148 N GLU H 126 SHEET 4 B36 GLU H 152 ILE H 162 -1 O TYR H 157 N ALA H 145 SHEET 5 B36 VAL N 767 PRO N 772 -1 O ILE N 770 N VAL H 161 SHEET 6 B36 ASP N 716 LEU N 721 -1 N ILE N 720 O LEU N 768 SHEET 7 B36 GLU N 726 TYR N 734 -1 O PHE N 727 N VAL N 719 SHEET 8 B36 VAL N 740 ILE N 748 -1 O ILE N 748 N GLU N 726 SHEET 9 B36 VAL N 753 ILE N 762 -1 O TYR N 757 N ALA N 745 SHEET 10 B36 VAL M 667 PRO M 672 -1 N ILE M 670 O VAL N 761 SHEET 11 B36 LYS M 615 LEU M 621 -1 N ILE M 620 O LEU M 668 SHEET 12 B36 GLU M 626 TYR M 634 -1 O GLY M 629 N VAL M 617 SHEET 13 B36 VAL M 640 GLN M 649 -1 O ILE M 648 N GLU M 626 SHEET 14 B36 GLU M 652 ILE M 662 -1 O TYR M 657 N ALA M 645 SHEET 15 B36 VAL L 567 PRO L 572 -1 N ILE L 570 O VAL M 661 SHEET 16 B36 ASP L 516 LEU L 521 -1 N ILE L 520 O LEU L 568 SHEET 17 B36 GLU L 526 TYR L 534 -1 O PHE L 527 N VAL L 519 SHEET 18 B36 VAL L 540 GLN L 549 -1 O ILE L 548 N GLU L 526 SHEET 19 B36 GLU L 552 ILE L 562 -1 O ILE L 562 N VAL L 540 SHEET 20 B36 VAL K 467 PRO K 472 -1 N ILE K 470 O VAL L 561 SHEET 21 B36 LYS K 415 LEU K 421 -1 N ILE K 420 O LEU K 468 SHEET 22 B36 GLU K 426 TYR K 434 -1 O GLY K 429 N VAL K 417 SHEET 23 B36 VAL K 440 GLN K 449 -1 O ILE K 448 N GLU K 426 SHEET 24 B36 GLU K 452 ILE K 462 -1 O TYR K 457 N ALA K 445 SHEET 25 B36 VAL J 367 PRO J 372 -1 N ILE J 370 O VAL K 461 SHEET 26 B36 LYS J 315 LEU J 321 -1 N ILE J 320 O LEU J 368 SHEET 27 B36 GLU J 326 TYR J 334 -1 O PHE J 327 N VAL J 319 SHEET 28 B36 VAL J 340 GLN J 349 -1 O ILE J 348 N GLU J 326 SHEET 29 B36 GLU J 352 ILE J 362 -1 O TYR J 357 N ALA J 345 SHEET 30 B36 VAL I 267 PRO I 272 -1 N ILE I 270 O VAL J 361 SHEET 31 B36 ASP I 216 LEU I 221 -1 N LEU I 218 O SER I 271 SHEET 32 B36 GLU I 226 TYR I 234 -1 O PHE I 227 N VAL I 219 SHEET 33 B36 VAL I 240 GLN I 249 -1 O ILE I 248 N GLU I 226 SHEET 34 B36 GLU I 252 ILE I 262 -1 O TYR I 257 N ALA I 245 SHEET 35 B36 VAL H 167 PRO H 172 -1 N ILE H 170 O VAL I 261 SHEET 36 B36 ASP H 116 LEU H 121 -1 N ILE H 120 O LEU H 168 LINK OP2 U O 2 CA CA O 310 1555 1555 2.37 LINK OP2 U O 3 CA CA O 310 1555 1555 2.68 LINK OP2 U O 5 CA CA O 310 1555 1555 2.22 LINK OP1 U O 6 CA CA O 310 1555 1555 2.75 LINK OP2 U P 2 CA CA P 330 1555 1555 2.09 LINK OP1 U P 3 CA CA P 330 1555 1555 2.22 LINK OP2 U P 5 CA CA P 330 1555 1555 2.36 LINK OP1 U P 6 CA CA P 330 1555 1555 2.59 LINK OP2 U Q 2 CA CA Q 380 1555 1555 2.38 LINK OP2 U Q 3 CA CA Q 380 1555 1555 2.47 LINK OP2 U Q 5 CA CA Q 380 1555 1555 2.23 LINK OP1 U Q 6 CA CA Q 380 1555 1555 2.50 LINK OP2 U R 2 CA CA R 390 1555 1555 2.04 LINK O5' U R 2 CA CA R 390 1555 1555 2.73 LINK OP2 U R 3 CA CA R 390 1555 1555 2.67 LINK OP2 U R 5 CA CA R 390 1555 1555 2.95 LINK OP1 U R 6 CA CA R 390 1555 1555 2.85 LINK OP2 U S 2 CA CA S 340 1555 1555 2.65 LINK OP2 U S 5 CA CA S 340 1555 1555 2.18 LINK O5' U S 5 CA CA S 340 1555 1555 2.87 LINK OP1 U S 6 CA CA S 340 1555 1555 2.49 LINK OP2 U T 2 CA CA T 320 1555 1555 2.86 LINK OP2 U T 5 CA CA T 320 1555 1555 2.33 LINK OP2 U U 2 CA CA U 370 1555 1555 2.40 LINK OP2 U U 3 CA CA U 370 1555 1555 2.39 LINK OP2 U U 5 CA CA U 370 1555 1555 2.46 LINK OP1 U U 6 CA CA U 370 1555 1555 2.73 SITE 1 AC1 5 U O 2 U O 3 U O 4 U O 5 SITE 2 AC1 5 U O 6 SITE 1 AC2 3 U T 2 U T 3 U T 5 SITE 1 AC3 4 U P 2 U P 3 U P 5 U P 6 SITE 1 AC4 4 U S 2 U S 3 U S 5 U S 6 SITE 1 AC5 4 U U 2 U U 3 U U 5 U U 6 SITE 1 AC6 4 U Q 2 U Q 3 U Q 5 U Q 6 SITE 1 AC7 4 U R 2 U R 3 U R 5 U R 6 SITE 1 AC8 9 HIS A 137 ASN A 139 ARG A 163 GLY A 164 SITE 2 AC8 9 ASP A 165 ARG B 263 U5P B 411 U5P G 416 SITE 3 AC8 9 LEU G 738 SITE 1 AC9 9 LEU A 138 U5P A 410 HIS B 237 ASN B 239 SITE 2 AC9 9 ARG B 263 GLY B 264 ASP B 265 HOH C 120 SITE 3 AC9 9 U5P C 412 SITE 1 BC1 11 ILE B 236 LEU B 238 U5P B 411 HOH C 120 SITE 2 BC1 11 HIS C 337 ASN C 339 ARG C 363 GLY C 364 SITE 3 BC1 11 ASP C 365 ARG D 463 U5P D 476 SITE 1 BC2 10 HOH C 133 LEU C 338 U5P C 412 HIS D 437 SITE 2 BC2 10 ASN D 439 ARG D 463 GLY D 464 ASP D 465 SITE 3 BC2 10 U5P E 414 ARG E 563 SITE 1 BC3 9 HOH D 9 HIS D 437 LEU D 438 U5P D 476 SITE 2 BC3 9 ASN E 539 ARG E 563 ASP E 565 U5P F 415 SITE 3 BC3 9 ARG F 663 SITE 1 BC4 11 HOH E 180 U5P E 414 HIS E 537 LEU E 538 SITE 2 BC4 11 HIS F 637 ASN F 639 ARG F 663 GLY F 664 SITE 3 BC4 11 ASP F 665 U5P G 416 ARG G 763 SITE 1 BC5 7 U5P A 410 U5P F 415 LEU F 638 HIS G 737 SITE 2 BC5 7 ASN G 739 ARG G 763 ASP G 765 SITE 1 BC6 8 HIS H 137 ASN H 139 ARG H 163 ASP H 165 SITE 2 BC6 8 ARG I 263 U5P I 418 U5P M 423 LEU N 738 SITE 1 BC7 8 LEU H 138 U5P H 417 HIS I 237 ASN I 239 SITE 2 BC7 8 ARG I 263 ASP I 265 ARG J 363 U5P J 419 SITE 1 BC8 9 LEU I 238 U5P I 418 HOH I 425 ASN J 339 SITE 2 BC8 9 ARG J 363 GLY J 364 ASP J 365 ARG K 463 SITE 3 BC8 9 U5P K 476 SITE 1 BC9 10 HOH J 255 LEU J 338 U5P J 419 HIS K 437 SITE 2 BC9 10 ASN K 439 ARG K 463 GLY K 464 ASP K 465 SITE 3 BC9 10 U5P L 421 ARG L 563 SITE 1 CC1 10 HOH K 220 HIS K 437 LEU K 438 U5P K 476 SITE 2 CC1 10 HIS L 537 ASN L 539 ARG L 563 ASP L 565 SITE 3 CC1 10 U5P M 422 ARG M 663 SITE 1 CC2 8 U5P L 421 LEU L 538 HOH M 32 U5P M 423 SITE 2 CC2 8 HIS M 637 ASN M 639 ARG M 663 ASP M 665 SITE 1 CC3 9 U5P H 417 U5P M 422 LYS M 622 LEU M 638 SITE 2 CC3 9 ASP M 665 HIS N 737 ASN N 739 ARG N 763 SITE 3 CC3 9 ASP N 765 CRYST1 68.000 68.000 84.800 105.00 108.80 100.00 P 1 14 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014706 0.002593 0.006248 0.00000 SCALE2 0.000000 0.014933 0.005356 0.00000 SCALE3 0.000000 0.000000 0.013234 0.00000