HEADER IMMUNOGLOBULIN 25-OCT-93 1MFE TITLE RECOGNITION OF A CELL-SURFACE OLIGO-SACCHARIDE OF PATHOGENIC TITLE 2 SALMONELLA BY AN ANTIBODY FAB FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: IGG1-LAMBDA SE155-4 FAB (LIGHT CHAIN); COMPND 3 CHAIN: L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: IGG1-LAMBDA SE155-4 FAB (HEAVY CHAIN); COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 7 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 8 ORGANISM_TAXID: 10090 KEYWDS IMMUNOGLOBULIN EXPDTA X-RAY DIFFRACTION AUTHOR M.CYGLER REVDAT 7 30-OCT-24 1MFE 1 HETSYN LINK REVDAT 6 29-JUL-20 1MFE 1 COMPND REMARK HETNAM LINK REVDAT 6 2 1 SITE ATOM REVDAT 5 25-DEC-19 1MFE 1 SEQADV SEQRES LINK REVDAT 4 25-AUG-09 1MFE 1 SOURCE REVDAT 3 24-FEB-09 1MFE 1 VERSN REVDAT 2 01-APR-03 1MFE 1 JRNL REVDAT 1 31-JAN-94 1MFE 0 JRNL AUTH M.CYGLER,D.R.ROSE,D.R.BUNDLE JRNL TITL RECOGNITION OF A CELL-SURFACE OLIGOSACCHARIDE OF PATHOGENIC JRNL TITL 2 SALMONELLA BY AN ANTIBODY FAB FRAGMENT. JRNL REF SCIENCE V. 253 442 1991 JRNL REFN ISSN 0036-8075 JRNL PMID 1713710 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3182 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 184 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.014 REMARK 3 BOND ANGLES (DEGREES) : 2.900 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THREE DISULFIDE BRIDGES WERE REFINED ASSUMING TWO REMARK 3 ALTERNATIVE CONFORMATIONS: 22 - 90, 272 - 346, AND 395 - REMARK 3 450. REMARK 4 REMARK 4 1MFE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000174989. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.65000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.75000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 64.30000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 39.75000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.65000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 64.30000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA L 212 REMARK 465 ASP L 213 REMARK 465 CYS L 214 REMARK 465 SER L 215 REMARK 465 GLN H 293 REMARK 465 ALA H 384 REMARK 465 ALA H 385 REMARK 465 GLN H 386 REMARK 465 THR H 387 REMARK 465 ASP H 388 REMARK 465 CYS H 469 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN L 131 CB CG OD1 ND2 REMARK 470 GLY H 292 CA C O REMARK 470 SER H 383 CA C O CB OG REMARK 470 SER H 413 OG REMARK 470 ASP H 428 CG OD1 OD2 REMARK 470 SER H 440 OG REMARK 470 GLU H 446 CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS L 200 NE2 HIS L 200 CD2 -0.069 REMARK 500 HIS H 419 NE2 HIS H 419 CD2 -0.072 REMARK 500 HIS H 454 NE2 HIS H 454 CD2 -0.070 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG L 23 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG L 23 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 TRP L 37 CD1 - CG - CD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 TRP L 37 CE2 - CD2 - CG ANGL. DEV. = -4.8 DEGREES REMARK 500 TRP L 93 CD1 - CG - CD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 TRP L 93 CB - CG - CD1 ANGL. DEV. = -9.6 DEGREES REMARK 500 TRP L 93 CE2 - CD2 - CG ANGL. DEV. = -6.1 DEGREES REMARK 500 TRP L 93 CG - CD2 - CE3 ANGL. DEV. = 6.7 DEGREES REMARK 500 TRP L 98 CD1 - CG - CD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 TRP L 98 CE2 - CD2 - CG ANGL. DEV. = -5.4 DEGREES REMARK 500 GLU L 129 CA - CB - CG ANGL. DEV. = 13.3 DEGREES REMARK 500 TRP L 151 CD1 - CG - CD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 TRP L 151 CE2 - CD2 - CG ANGL. DEV. = -5.2 DEGREES REMARK 500 TRP L 188 CD1 - CG - CD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 TRP L 188 CE2 - CD2 - CG ANGL. DEV. = -5.8 DEGREES REMARK 500 ARG H 263 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 TRP H 283 CD1 - CG - CD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 TRP H 283 CE2 - CD2 - CG ANGL. DEV. = -5.5 DEGREES REMARK 500 TRP H 286 CD1 - CG - CD2 ANGL. DEV. = 7.3 DEGREES REMARK 500 TRP H 286 CB - CG - CD1 ANGL. DEV. = -7.9 DEGREES REMARK 500 TRP H 286 CG - CD1 - NE1 ANGL. DEV. = -6.5 DEGREES REMARK 500 TRP H 286 CE2 - CD2 - CG ANGL. DEV. = -6.8 DEGREES REMARK 500 TRP H 286 CG - CD2 - CE3 ANGL. DEV. = 5.9 DEGREES REMARK 500 TRP H 297 CD1 - CG - CD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 TRP H 297 CG - CD1 - NE1 ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG H 315 NE - CZ - NH1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ARG H 315 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 SER H 335 CA - CB - OG ANGL. DEV. = -16.6 DEGREES REMARK 500 TYR H 344 CB - CG - CD2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG H 348 NE - CZ - NH1 ANGL. DEV. = 5.1 DEGREES REMARK 500 ARG H 348 NE - CZ - NH2 ANGL. DEV. = -4.9 DEGREES REMARK 500 TYR H 353 CB - CG - CD2 ANGL. DEV. = -3.9 DEGREES REMARK 500 TYR H 354 CB - CG - CD1 ANGL. DEV. = -3.8 DEGREES REMARK 500 TRP H 358 CD1 - CG - CD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 TRP H 358 CE2 - CD2 - CG ANGL. DEV. = -5.5 DEGREES REMARK 500 TRP H 409 CD1 - CG - CD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 TRP H 409 CE2 - CD2 - CG ANGL. DEV. = -5.4 DEGREES REMARK 500 TRP H 443 CD1 - CG - CD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 TRP H 443 CE2 - CD2 - CG ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG H 468 NE - CZ - NH1 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG H 468 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA L 2 120.52 69.47 REMARK 500 ASP L 43 46.29 77.22 REMARK 500 ASP L 52 58.23 39.85 REMARK 500 THR L 53 -51.33 68.65 REMARK 500 ASN L 54 10.98 -143.78 REMARK 500 LEU L 109 84.62 -51.28 REMARK 500 PRO H 291 106.77 -47.03 REMARK 500 SER H 306 27.79 48.38 REMARK 500 SER H 325 -43.71 171.59 REMARK 500 ALA H 342 167.84 178.31 REMARK 500 SER H 458 41.99 36.23 REMARK 500 REMARK 500 REMARK: NULL DBREF 1MFE L 2 215 GB 387376 AAA39089 21 234 DBREF 1MFE H 251 469 GB 208365 AAA73089 22 241 SEQADV 1MFE THR L 28 GB 387376 ALA 47 CONFLICT SEQADV 1MFE SER L 31 GB 387376 THR 50 CONFLICT SEQADV 1MFE GLY L 32 GB 387376 SER 51 CONFLICT SEQADV 1MFE HIS L 34 GB 387376 TYR 53 CONFLICT SEQADV 1MFE ASP L 52 GB 387376 GLY 71 CONFLICT SEQADV 1MFE PRO L 82 GB 387376 THR 101 CONFLICT SEQADV 1MFE CYS L 94 GB 387376 TYR 113 CONFLICT SEQADV 1MFE ASN L 95 GB 387376 SER 114 CONFLICT SEQADV 1MFE ILE L 99 GB 387376 VAL 118 CONFLICT SEQADV 1MFE H GB 208365 ALA 239 DELETION SEQADV 1MFE ARG H 468 GB 208365 ASP 240 CONFLICT SEQRES 1 L 215 PCA ALA VAL VAL THR GLN GLU SER ALA LEU THR THR SER SEQRES 2 L 215 PRO GLY GLU THR VAL THR LEU THR CYS ARG SER SER THR SEQRES 3 L 215 GLY THR VAL THR SER GLY ASN HIS ALA ASN TRP VAL GLN SEQRES 4 L 215 GLU LYS PRO ASP HIS LEU PHE THR GLY LEU ILE GLY ASP SEQRES 5 L 215 THR ASN ASN ARG ALA PRO GLY VAL PRO ALA ARG PHE SER SEQRES 6 L 215 GLY SER LEU ILE GLY ASP LYS ALA ALA LEU THR ILE THR SEQRES 7 L 215 GLY ALA GLN PRO GLU ASP GLU ALA ILE TYR PHE CYS ALA SEQRES 8 L 215 LEU TRP CYS ASN ASN HIS TRP ILE PHE GLY GLY GLY THR SEQRES 9 L 215 LYS LEU THR VAL LEU GLY GLN PRO LYS SER SER PRO SER SEQRES 10 L 215 VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU GLU THR SEQRES 11 L 215 ASN LYS ALA THR LEU VAL CYS THR ILE THR ASP PHE TYR SEQRES 12 L 215 PRO GLY VAL VAL THR VAL ASP TRP LYS VAL ASP GLY THR SEQRES 13 L 215 PRO VAL THR GLN GLY MET GLU THR THR GLN PRO SER LYS SEQRES 14 L 215 GLN SER ASN ASN LYS TYR MET ALA SER SER TYR LEU THR SEQRES 15 L 215 LEU THR ALA ARG ALA TRP GLU ARG HIS SER SER TYR SER SEQRES 16 L 215 CYS GLN VAL THR HIS GLU GLY HIS THR VAL GLU LYS SER SEQRES 17 L 215 LEU SER ARG ALA ASP CYS SER SEQRES 1 H 219 GLU VAL GLN VAL GLN GLN SER GLY THR VAL LEU ALA ARG SEQRES 2 H 219 PRO GLY ALA SER VAL LYS MET SER CYS LYS ALA SER GLY SEQRES 3 H 219 TYR THR PHE THR ASN TYR TRP MET HIS TRP ILE LYS GLN SEQRES 4 H 219 ARG PRO GLY GLN GLY LEU GLU TRP ILE GLY ALA ILE TYR SEQRES 5 H 219 PRO GLY ASN SER ALA THR PHE TYR ASN HIS LYS PHE ARG SEQRES 6 H 219 ALA LYS THR LYS LEU THR ALA VAL THR SER THR ILE THR SEQRES 7 H 219 ALA TYR MET GLU LEU SER SER LEU THR ASN GLU ASP SER SEQRES 8 H 219 ALA VAL TYR TYR CYS THR ARG GLY GLY HIS GLY TYR TYR SEQRES 9 H 219 GLY ASP TYR TRP GLY GLN GLY ALA SER LEU THR VAL SER SEQRES 10 H 219 SER ALA LYS THR THR PRO PRO SER VAL TYR PRO LEU ALA SEQRES 11 H 219 PRO GLY SER ALA ALA GLN THR ASP SER MET VAL THR LEU SEQRES 12 H 219 GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU PRO VAL THR SEQRES 13 H 219 VAL THR TRP ASN SER GLY SER LEU SER SER GLY VAL HIS SEQRES 14 H 219 THR PHE PRO ALA VAL LEU GLN SER ASP LEU TYR THR LEU SEQRES 15 H 219 SER SER SER VAL THR VAL PRO SER SER THR TRP PRO SER SEQRES 16 H 219 GLU THR VAL THR CYS ASN VAL ALA HIS PRO ALA SER SER SEQRES 17 H 219 THR LYS VAL ASP LYS LYS ILE VAL PRO ARG CYS MODRES 1MFE PCA L 1 GLN PYROGLUTAMIC ACID HET PCA L 1 8 HET MAN A 1 12 HET GLA A 2 11 HET ABE A 3 9 HETNAM PCA PYROGLUTAMIC ACID HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM GLA ALPHA-D-GALACTOPYRANOSE HETNAM ABE ALPHA-D-ABEQUOPYRANOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN GLA ALPHA-D-GALACTOSE; D-GALACTOSE; GALACTOSE; ALPHA D- HETSYN 2 GLA GALACTOSE HETSYN ABE ALPHA-D-ABEQUOSE; 3,6-DIDEOXY-ALPHA-D-XYLO- HETSYN 2 ABE HEXOPYRANOSE; 3,6-DIDEOXY-ALPHA-D-GULOPYRANOSE; 3,6- HETSYN 3 ABE DIDEOXY-ALPHA-D-GALACTOPYRANOSE; 3-DEOXY-ALPHA-D- HETSYN 4 ABE FUCOPYRANOSE; D-ABEQUOSE; ABEQUOSE FORMUL 1 PCA C5 H7 N O3 FORMUL 3 MAN C6 H12 O6 FORMUL 3 GLA C6 H12 O6 FORMUL 3 ABE C6 H12 O4 FORMUL 4 HOH *184(H2 O) HELIX 1 H1 SER L 24 GLY L 27 5 4 HELIX 2 H2 THR L 30 HIS L 34 5 5 HELIX 3 H3 SER L 124 GLU L 129 1 6 HELIX 4 H4 GLU L 127 ASN L 131 5 5 HELIX 5 H5 THR L 184 TRP L 188 1 5 HELIX 6 H6 ALA L 187 ARG L 190 5 4 HELIX 7 H7 THR H 278 TYR H 282 5 5 HELIX 8 H8 THR H 442 GLU H 446 1 5 SHEET 1 B1 4 PCA L 1 GLU L 7 0 SHEET 2 B1 4 GLU L 16 THR L 26 -1 N SER L 25 O VAL L 3 SHEET 3 B1 4 ASP L 71 ALA L 80 1 N ALA L 80 O GLU L 16 SHEET 4 B1 4 SER L 65 GLY L 70 -1 O SER L 65 N THR L 76 SHEET 1 B2 6 SER L 8 THR L 12 0 SHEET 2 B2 6 HIS L 97 LEU L 109 1 N LYS L 105 O SER L 8 SHEET 3 B2 6 GLU L 85 TRP L 93 -1 N ALA L 86 O LEU L 106 SHEET 4 B2 6 ASN L 36 PRO L 42 1 O ASN L 36 N ALA L 91 SHEET 5 B2 6 HIS L 44 GLY L 51 -1 N LEU L 45 O LYS L 41 SHEET 6 B2 6 ASN L 55 PRO L 58 1 O ASN L 55 N GLY L 51 SHEET 1 B3 4 GLU H 251 SER H 257 0 SHEET 2 B3 4 GLY H 265 GLY H 276 -1 O SER H 271 N SER H 257 SHEET 3 B3 4 ILE H 327 SER H 335 1 O ILE H 327 N ALA H 274 SHEET 4 B3 4 LYS H 317 VAL H 323 -1 O LYS H 317 N SER H 334 SHEET 1 B4 6 GLY H 258 ALA H 262 0 SHEET 2 B4 6 TYR H 353 SER H 367 1 O SER H 363 N VAL H 260 SHEET 3 B4 6 SER H 341 GLY H 352 -1 N ALA H 342 O LEU H 364 SHEET 4 B4 6 TRP H 283 PRO H 291 1 O TRP H 283 N GLY H 349 SHEET 5 B4 6 GLY H 292 TYR H 302 -1 N GLY H 294 O ARG H 290 SHEET 6 B4 6 ALA H 307 ASN H 311 1 O ALA H 307 N TYR H 302 SHEET 1 B5 4 SER L 114 SER L 124 0 SHEET 2 B5 4 ALA L 133 TYR L 143 -1 N TYR L 143 O SER L 114 SHEET 3 B5 4 ASN L 172 LEU L 183 1 N TYR L 175 O PHE L 142 SHEET 4 B5 4 GLY L 161 GLN L 170 -1 O GLY L 161 N THR L 182 SHEET 1 B6 3 VAL L 146 GLY L 155 0 SHEET 2 B6 3 SER L 192 GLU L 201 -1 N THR L 199 O THR L 148 SHEET 3 B6 3 GLY L 202 ARG L 211 1 O HIS L 203 N HIS L 200 SHEET 1 B7 4 THR H 372 GLY H 382 0 SHEET 2 B7 4 VAL H 391 PHE H 401 -1 N PHE H 401 O THR H 372 SHEET 3 B7 4 ASP H 428 VAL H 438 1 N TYR H 430 O TYR H 400 SHEET 4 B7 4 SER H 416 GLN H 426 -1 O GLY H 417 N THR H 437 SHEET 1 B8 3 PRO H 404 ASN H 410 0 SHEET 2 B8 3 GLU H 446 ALA H 456 -1 N ALA H 453 O THR H 406 SHEET 3 B8 3 SER H 457 ARG H 468 1 N SER H 458 O PRO H 455 SSBOND 1 CYS L 22 CYS L 90 1555 1555 2.00 SSBOND 2 CYS L 137 CYS L 196 1555 1555 2.00 SSBOND 3 CYS H 272 CYS H 346 1555 1555 2.04 SSBOND 4 CYS H 395 CYS H 450 1555 1555 2.02 LINK C PCA L 1 N ALA L 2 1555 1555 1.34 LINK O2 MAN A 1 C1 GLA A 2 1555 1555 1.44 LINK O3 MAN A 1 C1 ABE A 3 1555 1555 1.41 CISPEP 1 TYR L 143 PRO L 144 0 7.40 CISPEP 2 PHE H 401 PRO H 402 0 -10.60 CISPEP 3 GLU H 403 PRO H 404 0 5.52 CISPEP 4 TRP H 443 PRO H 444 0 8.56 CRYST1 47.300 128.600 79.500 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021142 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007776 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012579 0.00000 HETATM 1 N PCA L 1 23.888 30.086 36.349 1.00 56.15 N HETATM 2 CA PCA L 1 23.033 28.938 36.037 1.00 52.84 C HETATM 3 CB PCA L 1 23.329 27.924 37.178 1.00 54.86 C HETATM 4 CG PCA L 1 24.209 28.697 38.175 1.00 56.72 C HETATM 5 CD PCA L 1 24.497 30.051 37.520 1.00 57.44 C HETATM 6 OE PCA L 1 25.161 30.995 37.958 1.00 58.12 O HETATM 7 C PCA L 1 21.525 29.257 35.862 1.00 48.90 C HETATM 8 O PCA L 1 21.054 29.452 34.738 1.00 50.63 O