data_1MG9 # _entry.id 1MG9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.351 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1MG9 pdb_00001mg9 10.2210/pdb1mg9/pdb RCSB RCSB016893 ? ? WWPDB D_1000016893 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1LZW _pdbx_database_related.details 'STRUCTURAL BASIS OF CLPS-MEDIATED SWITCH IN CLPA SUBSTRATE' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1MG9 _pdbx_database_status.recvd_initial_deposition_date 2002-08-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zeth, K.' 1 'Ravelli, R.B.' 2 'Paal, K.' 3 'Cusack, S.' 4 'Bukau, B.' 5 'Dougan, D.A.' 6 # _citation.id primary _citation.title 'Structural analysis of the adaptor protein ClpS in complex with the N-terminal domain of ClpA' _citation.journal_abbrev Nat.Struct.Biol. _citation.journal_volume 9 _citation.page_first 906 _citation.page_last 911 _citation.year 2002 _citation.journal_id_ASTM NSBIEW _citation.country US _citation.journal_id_ISSN 1072-8368 _citation.journal_id_CSD 2024 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12426582 _citation.pdbx_database_id_DOI 10.1038/nsb869 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zeth, K.' 1 ? primary 'Ravelli, R.B.' 2 ? primary 'Paal, K.' 3 ? primary 'Cusack, S.' 4 ? primary 'Bukau, B.' 5 ? primary 'Dougan, D.A.' 6 ? # _cell.entry_id 1MG9 _cell.length_a 93.654 _cell.length_b 93.654 _cell.length_c 78.889 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MG9 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'protein yljA' 12125.969 1 ? H66A ? ? 2 polymer man 'ATP dependent clp protease ATP-binding subunit clpA' 16573.650 1 ? ? 'Residues 1-146' ? 3 non-polymer syn 'SPERMINE (FULLY PROTONATED FORM)' 206.372 1 ? ? ? ? 4 water nat water 18.015 27 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVAYQGKAICGVFTAEV AETKVAMVNKYARENEHPLLCTLEKA ; ;MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVAYQGKAICGVFTAEV AETKVAMVNKYARENEHPLLCTLEKA ; A ? 2 'polypeptide(L)' no no ;MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQP TLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDE ; ;MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQP TLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDE ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 LYS n 1 4 THR n 1 5 ASN n 1 6 ASP n 1 7 TRP n 1 8 LEU n 1 9 ASP n 1 10 PHE n 1 11 ASP n 1 12 GLN n 1 13 LEU n 1 14 ALA n 1 15 GLU n 1 16 GLU n 1 17 LYS n 1 18 VAL n 1 19 ARG n 1 20 ASP n 1 21 ALA n 1 22 LEU n 1 23 LYS n 1 24 PRO n 1 25 PRO n 1 26 SER n 1 27 MET n 1 28 TYR n 1 29 LYS n 1 30 VAL n 1 31 ILE n 1 32 LEU n 1 33 VAL n 1 34 ASN n 1 35 ASP n 1 36 ASP n 1 37 TYR n 1 38 THR n 1 39 PRO n 1 40 MET n 1 41 GLU n 1 42 PHE n 1 43 VAL n 1 44 ILE n 1 45 ASP n 1 46 VAL n 1 47 LEU n 1 48 GLN n 1 49 LYS n 1 50 PHE n 1 51 PHE n 1 52 SER n 1 53 TYR n 1 54 ASP n 1 55 VAL n 1 56 GLU n 1 57 ARG n 1 58 ALA n 1 59 THR n 1 60 GLN n 1 61 LEU n 1 62 MET n 1 63 LEU n 1 64 ALA n 1 65 VAL n 1 66 ALA n 1 67 TYR n 1 68 GLN n 1 69 GLY n 1 70 LYS n 1 71 ALA n 1 72 ILE n 1 73 CYS n 1 74 GLY n 1 75 VAL n 1 76 PHE n 1 77 THR n 1 78 ALA n 1 79 GLU n 1 80 VAL n 1 81 ALA n 1 82 GLU n 1 83 THR n 1 84 LYS n 1 85 VAL n 1 86 ALA n 1 87 MET n 1 88 VAL n 1 89 ASN n 1 90 LYS n 1 91 TYR n 1 92 ALA n 1 93 ARG n 1 94 GLU n 1 95 ASN n 1 96 GLU n 1 97 HIS n 1 98 PRO n 1 99 LEU n 1 100 LEU n 1 101 CYS n 1 102 THR n 1 103 LEU n 1 104 GLU n 1 105 LYS n 1 106 ALA n 2 1 MET n 2 2 LEU n 2 3 ASN n 2 4 GLN n 2 5 GLU n 2 6 LEU n 2 7 GLU n 2 8 LEU n 2 9 SER n 2 10 LEU n 2 11 ASN n 2 12 MET n 2 13 ALA n 2 14 PHE n 2 15 ALA n 2 16 ARG n 2 17 ALA n 2 18 ARG n 2 19 GLU n 2 20 HIS n 2 21 ARG n 2 22 HIS n 2 23 GLU n 2 24 PHE n 2 25 MET n 2 26 THR n 2 27 VAL n 2 28 GLU n 2 29 HIS n 2 30 LEU n 2 31 LEU n 2 32 LEU n 2 33 ALA n 2 34 LEU n 2 35 LEU n 2 36 SER n 2 37 ASN n 2 38 PRO n 2 39 SER n 2 40 ALA n 2 41 ARG n 2 42 GLU n 2 43 ALA n 2 44 LEU n 2 45 GLU n 2 46 ALA n 2 47 CYS n 2 48 SER n 2 49 VAL n 2 50 ASP n 2 51 LEU n 2 52 VAL n 2 53 ALA n 2 54 LEU n 2 55 ARG n 2 56 GLN n 2 57 GLU n 2 58 LEU n 2 59 GLU n 2 60 ALA n 2 61 PHE n 2 62 ILE n 2 63 GLU n 2 64 GLN n 2 65 THR n 2 66 THR n 2 67 PRO n 2 68 VAL n 2 69 LEU n 2 70 PRO n 2 71 ALA n 2 72 SER n 2 73 GLU n 2 74 GLU n 2 75 GLU n 2 76 ARG n 2 77 ASP n 2 78 THR n 2 79 GLN n 2 80 PRO n 2 81 THR n 2 82 LEU n 2 83 SER n 2 84 PHE n 2 85 GLN n 2 86 ARG n 2 87 VAL n 2 88 LEU n 2 89 GLN n 2 90 ARG n 2 91 ALA n 2 92 VAL n 2 93 PHE n 2 94 HIS n 2 95 VAL n 2 96 GLN n 2 97 SER n 2 98 SER n 2 99 GLY n 2 100 ARG n 2 101 ASN n 2 102 GLU n 2 103 VAL n 2 104 THR n 2 105 GLY n 2 106 ALA n 2 107 ASN n 2 108 VAL n 2 109 LEU n 2 110 VAL n 2 111 ALA n 2 112 ILE n 2 113 PHE n 2 114 SER n 2 115 GLU n 2 116 GLN n 2 117 GLU n 2 118 SER n 2 119 GLN n 2 120 ALA n 2 121 ALA n 2 122 TYR n 2 123 LEU n 2 124 LEU n 2 125 ARG n 2 126 LYS n 2 127 HIS n 2 128 GLU n 2 129 VAL n 2 130 SER n 2 131 ARG n 2 132 LEU n 2 133 ASP n 2 134 VAL n 2 135 VAL n 2 136 ASN n 2 137 PHE n 2 138 ILE n 2 139 SER n 2 140 HIS n 2 141 GLY n 2 142 THR n 2 143 ARG n 2 144 LYS n 2 145 ASP n 2 146 GLU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ? Escherichia ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? ? Escherichia ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP CLPS_ECOLI 1 ;MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEV AETKVAMVNKYARENEHPLLCTLEKA ; 1 P0A8Q6 ? 2 UNP CLPA_ECOLI 2 ;MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQP TLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDE ; 1 P0ABH9 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1MG9 A 1 ? 106 ? P0A8Q6 1 ? 106 ? 1 106 2 2 1MG9 B 1 ? 146 ? P0ABH9 1 ? 146 ? 1 146 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1MG9 _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 66 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P0A8Q6 _struct_ref_seq_dif.db_mon_id HIS _struct_ref_seq_dif.pdbx_seq_db_seq_num 66 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 66 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SPK non-polymer . 'SPERMINE (FULLY PROTONATED FORM)' ? 'C10 H30 N4 4' 206.372 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1MG9 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 59.17 _exptl_crystal.density_Matthews 3.01 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_details 'i-PR, PEG8000, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 18K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2001-10-06 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.933 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.933 # _reflns.entry_id 1MG9 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 28.71 _reflns.d_resolution_high 2.3 _reflns.number_obs 28962 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 31.1 _reflns.pdbx_redundancy 5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1MG9 _refine.ls_number_reflns_obs 15268 _refine.ls_number_reflns_all 15268 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF 422671.97 _refine.pdbx_data_cutoff_low_absF 0 _refine.ls_d_res_low 28.72 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 94.7 _refine.ls_R_factor_obs 0.252 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.252 _refine.ls_R_factor_R_free 0.294 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.3 _refine.ls_number_reflns_R_free 1427 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 47.2 _refine.aniso_B[1][1] -13.27 _refine.aniso_B[2][2] -13.27 _refine.aniso_B[3][3] 26.55 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.30147 _refine.solvent_model_param_bsol 24.2356 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1LZW' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF 422671.97 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1MG9 _refine_analyze.Luzzati_coordinate_error_obs .36 _refine_analyze.Luzzati_sigma_a_obs .4 _refine_analyze.Luzzati_d_res_low_obs 5 _refine_analyze.Luzzati_coordinate_error_free 0.44 _refine_analyze.Luzzati_sigma_a_free 0.43 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1799 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 27 _refine_hist.number_atoms_total 1840 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 28.72 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 19.7 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.85 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.30 _refine_ls_shell.d_res_low 2.44 _refine_ls_shell.number_reflns_R_work 2298 _refine_ls_shell.R_factor_R_work 0.339 _refine_ls_shell.percent_reflns_obs 97.1 _refine_ls_shell.R_factor_R_free 0.368 _refine_ls_shell.R_factor_R_free_error 0.024 _refine_ls_shell.percent_reflns_R_free 9.5 _refine_ls_shell.number_reflns_R_free 242 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM ? 'X-RAY DIFFRACTION' 3 SPK.PAR ? 'X-RAY DIFFRACTION' # _struct.entry_id 1MG9 _struct.title 'The structural basis of ClpS-mediated switch in ClpA substrate recognition' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1MG9 _struct_keywords.pdbx_keywords CHAPERONE _struct_keywords.text 'AAA+ATPASE, SUBSTRATE SENSOR, Chaperone' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 39 ? SER A 52 ? PRO A 39 SER A 52 1 ? 14 HELX_P HELX_P2 2 ASP A 54 ? GLY A 69 ? ASP A 54 GLY A 69 1 ? 16 HELX_P HELX_P3 3 ALA A 78 ? ASN A 95 ? ALA A 78 ASN A 95 1 ? 18 HELX_P HELX_P4 4 ASN B 3 ? HIS B 20 ? ASN B 3 HIS B 20 1 ? 18 HELX_P HELX_P5 5 THR B 26 ? LEU B 35 ? THR B 26 LEU B 35 1 ? 10 HELX_P HELX_P6 6 ASN B 37 ? CYS B 47 ? ASN B 37 CYS B 47 1 ? 11 HELX_P HELX_P7 7 ASP B 50 ? THR B 66 ? ASP B 50 THR B 66 1 ? 17 HELX_P HELX_P8 8 THR B 81 ? SER B 98 ? THR B 81 SER B 98 1 ? 18 HELX_P HELX_P9 9 THR B 104 ? PHE B 113 ? THR B 104 PHE B 113 1 ? 10 HELX_P HELX_P10 10 SER B 118 ? HIS B 127 ? SER B 118 HIS B 127 1 ? 10 HELX_P HELX_P11 11 SER B 130 ? HIS B 140 ? SER B 130 HIS B 140 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 70 ? THR A 77 ? LYS A 70 THR A 77 A 2 MET A 27 ? VAL A 33 ? MET A 27 VAL A 33 A 3 CYS A 101 ? LYS A 105 ? CYS A 101 LYS A 105 B 1 PHE B 24 ? MET B 25 ? PHE B 24 MET B 25 B 2 GLN B 79 ? PRO B 80 ? GLN B 79 PRO B 80 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 76 ? O PHE A 76 N TYR A 28 ? N TYR A 28 A 2 3 N LYS A 29 ? N LYS A 29 O GLU A 104 ? O GLU A 104 B 1 2 N MET B 25 ? N MET B 25 O GLN B 79 ? O GLN B 79 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id SPK _struct_site.pdbx_auth_seq_id 200 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 1 _struct_site.details 'BINDING SITE FOR RESIDUE SPK B 200' # _struct_site_gen.id 1 _struct_site_gen.site_id AC1 _struct_site_gen.pdbx_num_res 1 _struct_site_gen.label_comp_id SER _struct_site_gen.label_asym_id B _struct_site_gen.label_seq_id 97 _struct_site_gen.pdbx_auth_ins_code ? _struct_site_gen.auth_comp_id SER _struct_site_gen.auth_asym_id B _struct_site_gen.auth_seq_id 97 _struct_site_gen.label_atom_id . _struct_site_gen.label_alt_id ? _struct_site_gen.symmetry 1_555 _struct_site_gen.details ? # _database_PDB_matrix.entry_id 1MG9 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1MG9 _atom_sites.fract_transf_matrix[1][1] 0.010678 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010678 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012676 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLY 2 2 ? ? ? A . n A 1 3 LYS 3 3 ? ? ? A . n A 1 4 THR 4 4 ? ? ? A . n A 1 5 ASN 5 5 ? ? ? A . n A 1 6 ASP 6 6 ? ? ? A . n A 1 7 TRP 7 7 ? ? ? A . n A 1 8 LEU 8 8 ? ? ? A . n A 1 9 ASP 9 9 ? ? ? A . n A 1 10 PHE 10 10 ? ? ? A . n A 1 11 ASP 11 11 ? ? ? A . n A 1 12 GLN 12 12 ? ? ? A . n A 1 13 LEU 13 13 ? ? ? A . n A 1 14 ALA 14 14 ? ? ? A . n A 1 15 GLU 15 15 ? ? ? A . n A 1 16 GLU 16 16 ? ? ? A . n A 1 17 LYS 17 17 ? ? ? A . n A 1 18 VAL 18 18 ? ? ? A . n A 1 19 ARG 19 19 ? ? ? A . n A 1 20 ASP 20 20 ? ? ? A . n A 1 21 ALA 21 21 ? ? ? A . n A 1 22 LEU 22 22 ? ? ? A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 PRO 24 24 24 PRO PRO A . n A 1 25 PRO 25 25 25 PRO PRO A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 MET 27 27 27 MET MET A . n A 1 28 TYR 28 28 28 TYR TYR A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ASN 34 34 34 ASN ASN A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 THR 38 38 38 THR THR A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 MET 40 40 40 MET MET A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 GLN 48 48 48 GLN GLN A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 PHE 51 51 51 PHE PHE A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 VAL 55 55 55 VAL VAL A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 THR 59 59 59 THR THR A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 MET 62 62 62 MET MET A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 TYR 67 67 67 TYR TYR A . n A 1 68 GLN 68 68 68 GLN GLN A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 CYS 73 73 73 CYS CYS A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 THR 83 83 83 THR THR A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 MET 87 87 87 MET MET A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 ASN 89 89 89 ASN ASN A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 TYR 91 91 91 TYR TYR A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 ARG 93 93 93 ARG ARG A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 HIS 97 97 97 HIS HIS A . n A 1 98 PRO 98 98 98 PRO PRO A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 CYS 101 101 101 CYS CYS A . n A 1 102 THR 102 102 102 THR THR A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 LYS 105 105 105 LYS LYS A . n A 1 106 ALA 106 106 106 ALA ALA A . n B 2 1 MET 1 1 1 MET MET B . n B 2 2 LEU 2 2 2 LEU LEU B . n B 2 3 ASN 3 3 3 ASN ASN B . n B 2 4 GLN 4 4 4 GLN GLN B . n B 2 5 GLU 5 5 5 GLU GLU B . n B 2 6 LEU 6 6 6 LEU LEU B . n B 2 7 GLU 7 7 7 GLU GLU B . n B 2 8 LEU 8 8 8 LEU LEU B . n B 2 9 SER 9 9 9 SER SER B . n B 2 10 LEU 10 10 10 LEU LEU B . n B 2 11 ASN 11 11 11 ASN ASN B . n B 2 12 MET 12 12 12 MET MET B . n B 2 13 ALA 13 13 13 ALA ALA B . n B 2 14 PHE 14 14 14 PHE PHE B . n B 2 15 ALA 15 15 15 ALA ALA B . n B 2 16 ARG 16 16 16 ARG ARG B . n B 2 17 ALA 17 17 17 ALA ALA B . n B 2 18 ARG 18 18 18 ARG ARG B . n B 2 19 GLU 19 19 19 GLU GLU B . n B 2 20 HIS 20 20 20 HIS HIS B . n B 2 21 ARG 21 21 21 ARG ARG B . n B 2 22 HIS 22 22 22 HIS HIS B . n B 2 23 GLU 23 23 23 GLU GLU B . n B 2 24 PHE 24 24 24 PHE PHE B . n B 2 25 MET 25 25 25 MET MET B . n B 2 26 THR 26 26 26 THR THR B . n B 2 27 VAL 27 27 27 VAL VAL B . n B 2 28 GLU 28 28 28 GLU GLU B . n B 2 29 HIS 29 29 29 HIS HIS B . n B 2 30 LEU 30 30 30 LEU LEU B . n B 2 31 LEU 31 31 31 LEU LEU B . n B 2 32 LEU 32 32 32 LEU LEU B . n B 2 33 ALA 33 33 33 ALA ALA B . n B 2 34 LEU 34 34 34 LEU LEU B . n B 2 35 LEU 35 35 35 LEU LEU B . n B 2 36 SER 36 36 36 SER SER B . n B 2 37 ASN 37 37 37 ASN ASN B . n B 2 38 PRO 38 38 38 PRO PRO B . n B 2 39 SER 39 39 39 SER SER B . n B 2 40 ALA 40 40 40 ALA ALA B . n B 2 41 ARG 41 41 41 ARG ARG B . n B 2 42 GLU 42 42 42 GLU GLU B . n B 2 43 ALA 43 43 43 ALA ALA B . n B 2 44 LEU 44 44 44 LEU LEU B . n B 2 45 GLU 45 45 45 GLU GLU B . n B 2 46 ALA 46 46 46 ALA ALA B . n B 2 47 CYS 47 47 47 CYS CYS B . n B 2 48 SER 48 48 48 SER SER B . n B 2 49 VAL 49 49 49 VAL VAL B . n B 2 50 ASP 50 50 50 ASP ASP B . n B 2 51 LEU 51 51 51 LEU LEU B . n B 2 52 VAL 52 52 52 VAL VAL B . n B 2 53 ALA 53 53 53 ALA ALA B . n B 2 54 LEU 54 54 54 LEU LEU B . n B 2 55 ARG 55 55 55 ARG ARG B . n B 2 56 GLN 56 56 56 GLN GLN B . n B 2 57 GLU 57 57 57 GLU GLU B . n B 2 58 LEU 58 58 58 LEU LEU B . n B 2 59 GLU 59 59 59 GLU GLU B . n B 2 60 ALA 60 60 60 ALA ALA B . n B 2 61 PHE 61 61 61 PHE PHE B . n B 2 62 ILE 62 62 62 ILE ILE B . n B 2 63 GLU 63 63 63 GLU GLU B . n B 2 64 GLN 64 64 64 GLN GLN B . n B 2 65 THR 65 65 65 THR THR B . n B 2 66 THR 66 66 66 THR THR B . n B 2 67 PRO 67 67 67 PRO PRO B . n B 2 68 VAL 68 68 68 VAL VAL B . n B 2 69 LEU 69 69 69 LEU LEU B . n B 2 70 PRO 70 70 70 PRO PRO B . n B 2 71 ALA 71 71 71 ALA ALA B . n B 2 72 SER 72 72 72 SER SER B . n B 2 73 GLU 73 73 ? ? ? B . n B 2 74 GLU 74 74 ? ? ? B . n B 2 75 GLU 75 75 ? ? ? B . n B 2 76 ARG 76 76 76 ARG ALA B . n B 2 77 ASP 77 77 77 ASP ASP B . n B 2 78 THR 78 78 78 THR THR B . n B 2 79 GLN 79 79 79 GLN GLN B . n B 2 80 PRO 80 80 80 PRO PRO B . n B 2 81 THR 81 81 81 THR THR B . n B 2 82 LEU 82 82 82 LEU LEU B . n B 2 83 SER 83 83 83 SER SER B . n B 2 84 PHE 84 84 84 PHE PHE B . n B 2 85 GLN 85 85 85 GLN GLN B . n B 2 86 ARG 86 86 86 ARG ARG B . n B 2 87 VAL 87 87 87 VAL VAL B . n B 2 88 LEU 88 88 88 LEU LEU B . n B 2 89 GLN 89 89 89 GLN GLN B . n B 2 90 ARG 90 90 90 ARG ARG B . n B 2 91 ALA 91 91 91 ALA ALA B . n B 2 92 VAL 92 92 92 VAL VAL B . n B 2 93 PHE 93 93 93 PHE PHE B . n B 2 94 HIS 94 94 94 HIS HIS B . n B 2 95 VAL 95 95 95 VAL VAL B . n B 2 96 GLN 96 96 96 GLN GLN B . n B 2 97 SER 97 97 97 SER SER B . n B 2 98 SER 98 98 98 SER SER B . n B 2 99 GLY 99 99 99 GLY GLY B . n B 2 100 ARG 100 100 100 ARG ARG B . n B 2 101 ASN 101 101 101 ASN ASN B . n B 2 102 GLU 102 102 102 GLU GLU B . n B 2 103 VAL 103 103 103 VAL VAL B . n B 2 104 THR 104 104 104 THR THR B . n B 2 105 GLY 105 105 105 GLY GLY B . n B 2 106 ALA 106 106 106 ALA ALA B . n B 2 107 ASN 107 107 107 ASN ASN B . n B 2 108 VAL 108 108 108 VAL VAL B . n B 2 109 LEU 109 109 109 LEU LEU B . n B 2 110 VAL 110 110 110 VAL VAL B . n B 2 111 ALA 111 111 111 ALA ALA B . n B 2 112 ILE 112 112 112 ILE ILE B . n B 2 113 PHE 113 113 113 PHE PHE B . n B 2 114 SER 114 114 114 SER SER B . n B 2 115 GLU 115 115 115 GLU GLU B . n B 2 116 GLN 116 116 116 GLN GLN B . n B 2 117 GLU 117 117 117 GLU GLU B . n B 2 118 SER 118 118 118 SER SER B . n B 2 119 GLN 119 119 119 GLN GLN B . n B 2 120 ALA 120 120 120 ALA ALA B . n B 2 121 ALA 121 121 121 ALA ALA B . n B 2 122 TYR 122 122 122 TYR TYR B . n B 2 123 LEU 123 123 123 LEU LEU B . n B 2 124 LEU 124 124 124 LEU LEU B . n B 2 125 ARG 125 125 125 ARG ARG B . n B 2 126 LYS 126 126 126 LYS LYS B . n B 2 127 HIS 127 127 127 HIS HIS B . n B 2 128 GLU 128 128 128 GLU GLU B . n B 2 129 VAL 129 129 129 VAL VAL B . n B 2 130 SER 130 130 130 SER SER B . n B 2 131 ARG 131 131 131 ARG ARG B . n B 2 132 LEU 132 132 132 LEU LEU B . n B 2 133 ASP 133 133 133 ASP ASP B . n B 2 134 VAL 134 134 134 VAL VAL B . n B 2 135 VAL 135 135 135 VAL VAL B . n B 2 136 ASN 136 136 136 ASN ASN B . n B 2 137 PHE 137 137 137 PHE PHE B . n B 2 138 ILE 138 138 138 ILE ILE B . n B 2 139 SER 139 139 139 SER SER B . n B 2 140 HIS 140 140 140 HIS HIS B . n B 2 141 GLY 141 141 141 GLY GLY B . n B 2 142 THR 142 142 142 THR THR B . n B 2 143 ARG 143 143 143 ARG ARG B . n B 2 144 LYS 144 144 144 LYS LYS B . n B 2 145 ASP 145 145 145 ASP ASP B . n B 2 146 GLU 146 146 146 GLU GLU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SPK 1 200 200 SPK SPK B . D 4 HOH 1 107 2 HOH TIP A . D 4 HOH 2 108 5 HOH TIP A . D 4 HOH 3 109 7 HOH TIP A . D 4 HOH 4 110 9 HOH TIP A . D 4 HOH 5 111 10 HOH TIP A . D 4 HOH 6 112 13 HOH TIP A . D 4 HOH 7 113 16 HOH TIP A . D 4 HOH 8 114 17 HOH TIP A . D 4 HOH 9 115 18 HOH TIP A . D 4 HOH 10 116 19 HOH TIP A . D 4 HOH 11 117 20 HOH TIP A . D 4 HOH 12 118 23 HOH TIP A . D 4 HOH 13 119 26 HOH TIP A . D 4 HOH 14 120 27 HOH TIP A . E 4 HOH 1 201 1 HOH TIP B . E 4 HOH 2 202 3 HOH TIP B . E 4 HOH 3 203 4 HOH TIP B . E 4 HOH 4 204 6 HOH TIP B . E 4 HOH 5 205 8 HOH TIP B . E 4 HOH 6 206 11 HOH TIP B . E 4 HOH 7 207 12 HOH TIP B . E 4 HOH 8 208 14 HOH TIP B . E 4 HOH 9 209 15 HOH TIP B . E 4 HOH 10 210 21 HOH TIP B . E 4 HOH 11 211 22 HOH TIP B . E 4 HOH 12 212 24 HOH TIP B . E 4 HOH 13 213 25 HOH TIP B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1620 ? 1 MORE -7 ? 1 'SSA (A^2)' 12620 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-11-27 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-01-31 5 'Structure model' 1 4 2021-10-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Experimental preparation' 4 5 'Structure model' 'Database references' 5 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' exptl_crystal_grow 2 5 'Structure model' database_2 3 5 'Structure model' struct_ref_seq_dif 4 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_exptl_crystal_grow.temp' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_struct_ref_seq_dif.details' 5 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal XDS 'data scaling' . ? 1 XDS 'data reduction' . ? 2 CNS refinement . ? 3 CNS phasing . ? 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 GLY _pdbx_validate_close_contact.auth_seq_id_1 141 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 N _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 ARG _pdbx_validate_close_contact.auth_seq_id_2 143 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.10 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 99 ? ? -44.61 104.96 2 1 LEU B 2 ? ? 58.46 100.14 3 1 THR B 142 ? ? -59.71 49.60 4 1 ARG B 143 ? ? -54.33 84.39 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B ARG 76 ? CG ? B ARG 76 CG 2 1 Y 1 B ARG 76 ? CD ? B ARG 76 CD 3 1 Y 1 B ARG 76 ? NE ? B ARG 76 NE 4 1 Y 1 B ARG 76 ? CZ ? B ARG 76 CZ 5 1 Y 1 B ARG 76 ? NH1 ? B ARG 76 NH1 6 1 Y 1 B ARG 76 ? NH2 ? B ARG 76 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLY 2 ? A GLY 2 3 1 Y 1 A LYS 3 ? A LYS 3 4 1 Y 1 A THR 4 ? A THR 4 5 1 Y 1 A ASN 5 ? A ASN 5 6 1 Y 1 A ASP 6 ? A ASP 6 7 1 Y 1 A TRP 7 ? A TRP 7 8 1 Y 1 A LEU 8 ? A LEU 8 9 1 Y 1 A ASP 9 ? A ASP 9 10 1 Y 1 A PHE 10 ? A PHE 10 11 1 Y 1 A ASP 11 ? A ASP 11 12 1 Y 1 A GLN 12 ? A GLN 12 13 1 Y 1 A LEU 13 ? A LEU 13 14 1 Y 1 A ALA 14 ? A ALA 14 15 1 Y 1 A GLU 15 ? A GLU 15 16 1 Y 1 A GLU 16 ? A GLU 16 17 1 Y 1 A LYS 17 ? A LYS 17 18 1 Y 1 A VAL 18 ? A VAL 18 19 1 Y 1 A ARG 19 ? A ARG 19 20 1 Y 1 A ASP 20 ? A ASP 20 21 1 Y 1 A ALA 21 ? A ALA 21 22 1 Y 1 A LEU 22 ? A LEU 22 23 1 Y 1 B GLU 73 ? B GLU 73 24 1 Y 1 B GLU 74 ? B GLU 74 25 1 Y 1 B GLU 75 ? B GLU 75 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SPERMINE (FULLY PROTONATED FORM)' SPK 4 water HOH #