HEADER MAJOR HISTOCOMPATIBILITY COMPLEX 24-AUG-98 1MHE TITLE THE HUMAN NON-CLASSICAL MAJOR HISTOCOMPATIBILITY COMPLEX MOLECULE HLA- TITLE 2 E COMPND MOL_ID: 1; COMPND 2 MOLECULE: HLA CLASS I HISTOCOMPATIBILITY ANTIGEN HLA-E; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: EXTRACELLULAR DOMAIN, ALPHA CHAIN E; COMPND 5 SYNONYM: MHC NONCLASSICAL CHAIN, MHC-E, HLA-E, MHC CLASS IB, MHC COMPND 6 CLASS 1B; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 10 CHAIN: B, D; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: PEPTIDE (VMAPRTVLL); COMPND 14 CHAIN: P, Q; COMPND 15 ENGINEERED: YES; COMPND 16 OTHER_DETAILS: PEPTIDE SEQUENCE IS THAT OF THE LEADER SEQUENCE OF THE COMPND 17 CLASSICAL CLASS I MOLECULES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 CELL_LINE: BL21; SOURCE 6 GENE: HLA-E; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) PLYSS; SOURCE 10 EXPRESSION_SYSTEM_CELLULAR_LOCATION: INCLUSION BODIES; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: COC057; SOURCE 12 OTHER_DETAILS: DENATURED AND REFOLDED IN THE PRESENCE OF PEPTIDE AND SOURCE 13 BETA-2-MICROGLOBULIN; SOURCE 14 MOL_ID: 2; SOURCE 15 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 16 ORGANISM_COMMON: HUMAN; SOURCE 17 ORGANISM_TAXID: 9606; SOURCE 18 CELL_LINE: BL21; SOURCE 19 GENE: BETA-2-MICROGLOBULIN; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 22 EXPRESSION_SYSTEM_STRAIN: XA 90; SOURCE 23 EXPRESSION_SYSTEM_CELLULAR_LOCATION: INCLUSION BODIES; SOURCE 24 EXPRESSION_SYSTEM_PLASMID: PHN1; SOURCE 25 MOL_ID: 3 KEYWDS HLA-E, HLA E, MAJOR HISTOCOMPATIBILITY COMPLEX, MHC, HLA, BETA 2 KEYWDS 2 MICROGLOBULIN, LEADER PEPTIDE, NON-CLASSICAL MHC, CLASS IB MHC EXPDTA X-RAY DIFFRACTION AUTHOR C.A.O'CALLAGHAN,J.TORMO,B.E.WILLCOX,V.B.BRAUD,B.K.JAKOBSEN, AUTHOR 2 D.I.STUART,A.J.MCMICHAEL,J.I.BELL,E.Y.JONES REVDAT 4 09-AUG-23 1MHE 1 REMARK REVDAT 3 24-FEB-09 1MHE 1 VERSN REVDAT 2 01-APR-03 1MHE 1 JRNL REVDAT 1 23-MAR-99 1MHE 0 JRNL AUTH C.A.O'CALLAGHAN,J.TORMO,B.E.WILLCOX,V.M.BRAUD,B.K.JAKOBSEN, JRNL AUTH 2 D.I.STUART,A.J.MCMICHAEL,J.I.BELL,E.Y.JONES JRNL TITL STRUCTURAL FEATURES IMPOSE TIGHT PEPTIDE BINDING SPECIFICITY JRNL TITL 2 IN THE NONCLASSICAL MHC MOLECULE HLA-E. JRNL REF MOL.CELL V. 1 531 1998 JRNL REFN ISSN 1097-2765 JRNL PMID 9660937 JRNL DOI 10.1016/S1097-2765(00)80053-2 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.A.O'CALLAGHAN,J.TORMO,B.E.WILLCOX,C.D.BLUNDELL, REMARK 1 AUTH 2 B.K.JAKOBSEN,D.I.STUART,A.J.MCMICHAEL,J.I.BELL,E.Y.JONES REMARK 1 TITL PRODUCTION, CRYSTALLIZATION, AND PRELIMINARY X-RAY ANALYSIS REMARK 1 TITL 2 OF THE HUMAN MHC CLASS IB MOLECULE HLA-E REMARK 1 REF PROTEIN SCI. V. 7 1264 1998 REMARK 1 REFN ISSN 0961-8368 REMARK 2 REMARK 2 RESOLUTION. 2.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 91.0 REMARK 3 NUMBER OF REFLECTIONS : 35977 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.500 REMARK 3 FREE R VALUE TEST SET COUNT : 2716 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.10 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4147 REMARK 3 BIN R VALUE (WORKING SET) : 0.3200 REMARK 3 BIN FREE R VALUE : 0.3450 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 7.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 310 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6280 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 8 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 70.12 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.35 REMARK 3 ESD FROM SIGMAA (A) : 0.57 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.40 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.62 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.550 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 26.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.130 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : CONSTR REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : TOPPAR:PARAM19.SOL REMARK 3 PARAMETER FILE 3 : SO4.PAR REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : TOPH19.SOL REMARK 3 TOPOLOGY FILE 3 : SO4.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: IT SHOULD BE NOTED THAT THE APPLICATION REMARK 3 OF OVERALL ANISOTROPIC B SCALING LED TO A SIGNIFICANT INCREASE REMARK 3 OF THE TEMPERATURE FACTORS. REMARK 4 REMARK 4 1MHE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000175001. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : MAY-97 REMARK 200 TEMPERATURE (KELVIN) : 295 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.04 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRROR 1 AND MIRROR 2 REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37611 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.850 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.48300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR 3.851 REMARK 200 STARTING MODEL: PDB ENTRY 3HLA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.46667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 58.93333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 58.93333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 29.46667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, P, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 GLY C 1 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG A 79 CG CD NE CZ NH1 NH2 REMARK 480 GLY A 223 N CA C O REMARK 480 HIS A 224 N CA C O CB CG ND1 REMARK 480 HIS A 224 CD2 CE1 NE2 REMARK 480 THR A 225 N CA C O CB OG1 CG2 REMARK 480 GLN A 226 N CA C O CB CG CD REMARK 480 GLN A 226 OE1 NE2 REMARK 480 ASP A 227 N CA C O CB CG OD1 REMARK 480 ASP A 227 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH11 ARG A 35 HH11 ARG A 48 1.19 REMARK 500 HH TYR C 7 H3 VAL Q 1 1.30 REMARK 500 H GLY A 237 H2 HOH A 1003 1.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 35 CD - NE - CZ ANGL. DEV. = 8.9 DEGREES REMARK 500 ARG A 35 NE - CZ - NH1 ANGL. DEV. = 6.8 DEGREES REMARK 500 ARG A 35 NE - CZ - NH2 ANGL. DEV. = -7.9 DEGREES REMARK 500 ARG A 44 NE - CZ - NH1 ANGL. DEV. = 5.1 DEGREES REMARK 500 ARG A 44 NE - CZ - NH2 ANGL. DEV. = -5.3 DEGREES REMARK 500 ARG A 48 NE - CZ - NH1 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG A 48 NE - CZ - NH2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG A 65 NE - CZ - NH1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG A 65 NE - CZ - NH2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ARG A 108 NE - CZ - NH1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG A 108 NE - CZ - NH2 ANGL. DEV. = -6.1 DEGREES REMARK 500 ARG A 131 NE - CZ - NH1 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG A 131 NE - CZ - NH2 ANGL. DEV. = -5.9 DEGREES REMARK 500 ARG A 202 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG A 202 NE - CZ - NH2 ANGL. DEV. = -5.1 DEGREES REMARK 500 ARG A 234 NE - CZ - NH1 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG A 234 NE - CZ - NH2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG B 45 NE - CZ - NH1 ANGL. DEV. = 5.3 DEGREES REMARK 500 ARG B 45 NE - CZ - NH2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG C 35 CG - CD - NE ANGL. DEV. = -18.0 DEGREES REMARK 500 ARG C 35 CD - NE - CZ ANGL. DEV. = 9.7 DEGREES REMARK 500 ARG C 35 NE - CZ - NH1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG C 35 NE - CZ - NH2 ANGL. DEV. = -6.6 DEGREES REMARK 500 ARG C 44 NE - CZ - NH1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG C 44 NE - CZ - NH2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG C 48 NE - CZ - NH1 ANGL. DEV. = 5.1 DEGREES REMARK 500 ARG C 48 NE - CZ - NH2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ARG C 65 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG C 65 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ARG C 108 CD - NE - CZ ANGL. DEV. = 8.9 DEGREES REMARK 500 ARG C 108 NE - CZ - NH1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG C 108 NE - CZ - NH2 ANGL. DEV. = -6.5 DEGREES REMARK 500 ARG C 131 NE - CZ - NH1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG C 131 NE - CZ - NH2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ARG C 202 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG C 202 NE - CZ - NH2 ANGL. DEV. = -5.3 DEGREES REMARK 500 ARG C 234 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG D 45 NE - CZ - NH1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG D 45 NE - CZ - NH2 ANGL. DEV. = -5.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 17 24.26 -74.80 REMARK 500 ASP A 29 -123.52 55.54 REMARK 500 TRP A 51 2.73 -64.43 REMARK 500 ASN A 77 -37.72 -39.99 REMARK 500 ASP A 106 2.32 -66.89 REMARK 500 LEU A 110 -59.59 -121.85 REMARK 500 GLU A 114 139.72 -174.30 REMARK 500 ASP A 119 50.21 34.67 REMARK 500 TYR A 123 -70.07 -116.60 REMARK 500 ASP A 137 124.20 170.74 REMARK 500 THR A 138 -5.76 -53.97 REMARK 500 ASP A 162 -78.00 -106.73 REMARK 500 HIS A 188 154.84 165.56 REMARK 500 TYR A 209 136.97 -171.68 REMARK 500 ASP A 220 47.66 38.19 REMARK 500 GLU A 222 175.78 -53.37 REMARK 500 THR A 225 34.71 169.56 REMARK 500 GLN A 226 57.10 -91.19 REMARK 500 ASP A 227 20.85 134.24 REMARK 500 PRO A 269 164.63 -48.63 REMARK 500 ARG A 273 -32.70 -150.19 REMARK 500 TRP B 60 -3.08 71.57 REMARK 500 ARG C 17 3.18 -64.69 REMARK 500 ASP C 29 -123.13 55.21 REMARK 500 TRP C 51 2.79 -64.21 REMARK 500 ASP C 106 1.93 -67.74 REMARK 500 LEU C 110 -58.83 -120.20 REMARK 500 GLU C 114 139.90 -173.56 REMARK 500 ASP C 119 50.40 39.58 REMARK 500 ASP C 137 158.84 168.39 REMARK 500 ASP C 162 -78.78 -107.14 REMARK 500 HIS C 188 155.16 167.98 REMARK 500 ILE C 194 -64.25 -101.69 REMARK 500 TYR C 209 137.70 -171.09 REMARK 500 THR C 225 -25.10 -158.73 REMARK 500 GLN C 226 72.15 -62.70 REMARK 500 ASP C 227 21.48 118.10 REMARK 500 PRO C 269 166.07 -48.08 REMARK 500 TRP D 60 -4.90 67.92 REMARK 500 THR Q 6 -152.50 -80.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 35 0.13 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1002 DBREF 1MHE A 1 274 UNP P13747 HLAE_HUMAN 22 295 DBREF 1MHE B 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 1MHE C 1 274 UNP P13747 HLAE_HUMAN 22 295 DBREF 1MHE D 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 1MHE P 1 9 PDB 1MHE 1MHE 1 9 DBREF 1MHE Q 1 9 PDB 1MHE 1MHE 1 9 SEQRES 1 A 274 GLY SER HIS SER LEU LYS TYR PHE HIS THR SER VAL SER SEQRES 2 A 274 ARG PRO GLY ARG GLY GLU PRO ARG PHE ILE SER VAL GLY SEQRES 3 A 274 TYR VAL ASP ASP THR GLN PHE VAL ARG PHE ASP ASN ASP SEQRES 4 A 274 ALA ALA SER PRO ARG MET VAL PRO ARG ALA PRO TRP MET SEQRES 5 A 274 GLU GLN GLU GLY SER GLU TYR TRP ASP ARG GLU THR ARG SEQRES 6 A 274 SER ALA ARG ASP THR ALA GLN ILE PHE ARG VAL ASN LEU SEQRES 7 A 274 ARG THR LEU ARG GLY TYR TYR ASN GLN SER GLU ALA GLY SEQRES 8 A 274 SER HIS THR LEU GLN TRP MET HIS GLY CYS GLU LEU GLY SEQRES 9 A 274 PRO ASP ARG ARG PHE LEU ARG GLY TYR GLU GLN PHE ALA SEQRES 10 A 274 TYR ASP GLY LYS ASP TYR LEU THR LEU ASN GLU ASP LEU SEQRES 11 A 274 ARG SER TRP THR ALA VAL ASP THR ALA ALA GLN ILE SER SEQRES 12 A 274 GLU GLN LYS SER ASN ASP ALA SER GLU ALA GLU HIS GLN SEQRES 13 A 274 ARG ALA TYR LEU GLU ASP THR CYS VAL GLU TRP LEU HIS SEQRES 14 A 274 LYS TYR LEU GLU LYS GLY LYS GLU THR LEU LEU HIS LEU SEQRES 15 A 274 GLU PRO PRO LYS THR HIS VAL THR HIS HIS PRO ILE SER SEQRES 16 A 274 ASP HIS GLU ALA THR LEU ARG CYS TRP ALA LEU GLY PHE SEQRES 17 A 274 TYR PRO ALA GLU ILE THR LEU THR TRP GLN GLN ASP GLY SEQRES 18 A 274 GLU GLY HIS THR GLN ASP THR GLU LEU VAL GLU THR ARG SEQRES 19 A 274 PRO ALA GLY ASP GLY THR PHE GLN LYS TRP ALA ALA VAL SEQRES 20 A 274 VAL VAL PRO SER GLY GLU GLU GLN ARG TYR THR CYS HIS SEQRES 21 A 274 VAL GLN HIS GLU GLY LEU PRO GLU PRO VAL THR LEU ARG SEQRES 22 A 274 TRP SEQRES 1 B 100 MET ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 B 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 B 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 B 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 B 100 SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU SEQRES 6 B 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU SEQRES 7 B 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 B 100 LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 C 274 GLY SER HIS SER LEU LYS TYR PHE HIS THR SER VAL SER SEQRES 2 C 274 ARG PRO GLY ARG GLY GLU PRO ARG PHE ILE SER VAL GLY SEQRES 3 C 274 TYR VAL ASP ASP THR GLN PHE VAL ARG PHE ASP ASN ASP SEQRES 4 C 274 ALA ALA SER PRO ARG MET VAL PRO ARG ALA PRO TRP MET SEQRES 5 C 274 GLU GLN GLU GLY SER GLU TYR TRP ASP ARG GLU THR ARG SEQRES 6 C 274 SER ALA ARG ASP THR ALA GLN ILE PHE ARG VAL ASN LEU SEQRES 7 C 274 ARG THR LEU ARG GLY TYR TYR ASN GLN SER GLU ALA GLY SEQRES 8 C 274 SER HIS THR LEU GLN TRP MET HIS GLY CYS GLU LEU GLY SEQRES 9 C 274 PRO ASP ARG ARG PHE LEU ARG GLY TYR GLU GLN PHE ALA SEQRES 10 C 274 TYR ASP GLY LYS ASP TYR LEU THR LEU ASN GLU ASP LEU SEQRES 11 C 274 ARG SER TRP THR ALA VAL ASP THR ALA ALA GLN ILE SER SEQRES 12 C 274 GLU GLN LYS SER ASN ASP ALA SER GLU ALA GLU HIS GLN SEQRES 13 C 274 ARG ALA TYR LEU GLU ASP THR CYS VAL GLU TRP LEU HIS SEQRES 14 C 274 LYS TYR LEU GLU LYS GLY LYS GLU THR LEU LEU HIS LEU SEQRES 15 C 274 GLU PRO PRO LYS THR HIS VAL THR HIS HIS PRO ILE SER SEQRES 16 C 274 ASP HIS GLU ALA THR LEU ARG CYS TRP ALA LEU GLY PHE SEQRES 17 C 274 TYR PRO ALA GLU ILE THR LEU THR TRP GLN GLN ASP GLY SEQRES 18 C 274 GLU GLY HIS THR GLN ASP THR GLU LEU VAL GLU THR ARG SEQRES 19 C 274 PRO ALA GLY ASP GLY THR PHE GLN LYS TRP ALA ALA VAL SEQRES 20 C 274 VAL VAL PRO SER GLY GLU GLU GLN ARG TYR THR CYS HIS SEQRES 21 C 274 VAL GLN HIS GLU GLY LEU PRO GLU PRO VAL THR LEU ARG SEQRES 22 C 274 TRP SEQRES 1 D 100 MET ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 D 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 D 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 D 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 D 100 SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU SEQRES 6 D 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU SEQRES 7 D 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 D 100 LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 P 9 VAL MET ALA PRO ARG THR VAL LEU LEU SEQRES 1 Q 9 VAL MET ALA PRO ARG THR VAL LEU LEU HET SO4 A1002 5 HETNAM SO4 SULFATE ION FORMUL 7 SO4 O4 S 2- FORMUL 8 HOH *8(H2 O) HELIX 1 1 PRO A 50 MET A 52 5 3 HELIX 2 2 SER A 57 TYR A 85 1 29 HELIX 3 3 GLN A 141 ALA A 150 1 10 HELIX 4 4 GLU A 152 GLU A 161 1 10 HELIX 5 5 THR A 163 LYS A 174 1 12 HELIX 6 6 LYS A 176 LEU A 179 1 4 HELIX 7 7 GLU A 254 ARG A 256 5 3 HELIX 8 8 PRO C 50 MET C 52 5 3 HELIX 9 9 SER C 57 TYR C 85 1 29 HELIX 10 10 ALA C 140 ALA C 150 1 11 HELIX 11 11 GLU C 152 GLU C 161 1 10 HELIX 12 12 THR C 163 LYS C 174 1 12 HELIX 13 13 LYS C 176 LEU C 179 1 4 HELIX 14 14 GLU C 254 ARG C 256 5 3 SHEET 1 A 7 THR A 31 ASP A 37 0 SHEET 2 A 7 ARG A 21 VAL A 28 -1 N VAL A 28 O THR A 31 SHEET 3 A 7 HIS A 3 VAL A 12 -1 N VAL A 12 O ARG A 21 SHEET 4 A 7 THR A 94 LEU A 103 -1 N LEU A 103 O HIS A 3 SHEET 5 A 7 PHE A 109 TYR A 118 -1 N ALA A 117 O GLN A 96 SHEET 6 A 7 LYS A 121 LEU A 126 -1 N LEU A 124 O PHE A 116 SHEET 7 A 7 TRP A 133 ALA A 135 -1 N THR A 134 O THR A 125 SHEET 1 B 3 LYS A 186 PRO A 193 0 SHEET 2 B 3 GLU A 198 LEU A 206 -1 N LEU A 206 O LYS A 186 SHEET 3 B 3 LYS A 243 PRO A 250 -1 N VAL A 249 O ALA A 199 SHEET 1 C 3 THR A 214 GLN A 219 0 SHEET 2 C 3 TYR A 257 GLN A 262 -1 N GLN A 262 O THR A 214 SHEET 3 C 3 VAL A 270 LEU A 272 -1 N LEU A 272 O CYS A 259 SHEET 1 D 3 LYS B 6 SER B 11 0 SHEET 2 D 3 SER B 20 PHE B 30 -1 N SER B 28 O LYS B 6 SHEET 3 D 3 PHE B 62 THR B 71 -1 N PHE B 70 O ASN B 21 SHEET 1 E 3 GLU B 36 LYS B 41 0 SHEET 2 E 3 TYR B 78 ASN B 83 -1 N ASN B 83 O GLU B 36 SHEET 3 E 3 LYS B 91 LYS B 94 -1 N VAL B 93 O CYS B 80 SHEET 1 F 7 THR C 31 ASP C 37 0 SHEET 2 F 7 ARG C 21 VAL C 28 -1 N VAL C 28 O THR C 31 SHEET 3 F 7 HIS C 3 VAL C 12 -1 N VAL C 12 O ARG C 21 SHEET 4 F 7 THR C 94 LEU C 103 -1 N LEU C 103 O HIS C 3 SHEET 5 F 7 PHE C 109 TYR C 118 -1 N ALA C 117 O GLN C 96 SHEET 6 F 7 LYS C 121 LEU C 126 -1 N LEU C 124 O PHE C 116 SHEET 7 F 7 TRP C 133 ALA C 135 -1 N THR C 134 O THR C 125 SHEET 1 G 4 LYS C 186 PRO C 193 0 SHEET 2 G 4 GLU C 198 LEU C 206 -1 N LEU C 206 O LYS C 186 SHEET 3 G 4 LYS C 243 PRO C 250 -1 N VAL C 249 O ALA C 199 SHEET 4 G 4 THR C 228 LEU C 230 -1 N GLU C 229 O ALA C 246 SHEET 1 H 3 THR C 214 GLN C 219 0 SHEET 2 H 3 TYR C 257 GLN C 262 -1 N GLN C 262 O THR C 214 SHEET 3 H 3 VAL C 270 ARG C 273 -1 N LEU C 272 O CYS C 259 SHEET 1 I 3 VAL D 9 SER D 11 0 SHEET 2 I 3 SER D 20 PHE D 30 -1 N ASN D 24 O TYR D 10 SHEET 3 I 3 PHE D 62 THR D 71 -1 N PHE D 70 O ASN D 21 SHEET 1 J 3 GLU D 36 LYS D 41 0 SHEET 2 J 3 TYR D 78 ASN D 83 -1 N ASN D 83 O GLU D 36 SHEET 3 J 3 LYS D 91 LYS D 94 -1 N VAL D 93 O CYS D 80 SSBOND 1 CYS A 101 CYS A 164 1555 1555 2.03 SSBOND 2 CYS A 203 CYS A 259 1555 1555 2.03 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.03 SSBOND 4 CYS C 101 CYS C 164 1555 1555 2.03 SSBOND 5 CYS C 203 CYS C 259 1555 1555 2.02 SSBOND 6 CYS D 25 CYS D 80 1555 1555 2.05 CISPEP 1 TYR A 209 PRO A 210 0 -0.30 CISPEP 2 HIS B 31 PRO B 32 0 -0.32 CISPEP 3 TYR C 209 PRO C 210 0 -0.81 CISPEP 4 HIS D 31 PRO D 32 0 1.01 SITE 1 AC1 1 ARG A 75 CRYST1 182.200 182.200 88.400 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005488 0.003169 0.000000 0.00000 SCALE2 0.000000 0.006338 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011312 0.00000