HEADER IMMUNE SYSTEM 08-MAR-95 1MLB TITLE MONOCLONAL ANTIBODY FAB D44.1 RAISED AGAINST CHICKEN EGG-WHITE TITLE 2 LYSOZYME COMPND MOL_ID: 1; COMPND 2 MOLECULE: IGG1-KAPPA D44.1 FAB (LIGHT CHAIN); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: IGG1-KAPPA D44.1 FAB (HEAVY CHAIN); COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 7 ORGANISM_COMMON: MOUSE; SOURCE 8 ORGANISM_TAXID: 10090 KEYWDS IMMUNOGLOBULIN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR B.C.BRADEN,H.SOUCHON,J.-L.EISELE,G.A.BENTLEY,T.N.BHAT,J.NAVAZA, AUTHOR 2 R.J.POLJAK REVDAT 6 16-OCT-24 1MLB 1 SEQADV REVDAT 5 18-SEP-13 1MLB 1 HEADER SOURCE VERSN REVDAT 4 25-AUG-09 1MLB 1 SOURCE REVDAT 3 24-FEB-09 1MLB 1 VERSN REVDAT 2 01-APR-03 1MLB 1 JRNL REVDAT 1 03-JUN-95 1MLB 0 JRNL AUTH B.C.BRADEN,H.SOUCHON,J.L.EISELE,G.A.BENTLEY,T.N.BHAT, JRNL AUTH 2 J.NAVAZA,R.J.POLJAK JRNL TITL THREE-DIMENSIONAL STRUCTURES OF THE FREE AND THE JRNL TITL 2 ANTIGEN-COMPLEXED FAB FROM MONOCLONAL ANTI-LYSOZYME ANTIBODY JRNL TITL 3 D44.1. JRNL REF J.MOL.BIOL. V. 243 767 1994 JRNL REFN ISSN 0022-2836 JRNL PMID 7966295 JRNL DOI 10.1016/0022-2836(94)90046-9 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.FISCHMANN,H.SOUCHON,M.-M.RIOTTOT,D.TELLO,R.J.POLJAK REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY X-RAY DIFFRACTION STUDIES OF REMARK 1 TITL 2 TWO ANTIGEN-ANTIBODY (LYSOZYME-FAB) COMPLEXES REMARK 1 REF J.MOL.BIOL. V. 203 527 1988 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROLSQ REMARK 3 AUTHORS : KONNERT,HENDRICKSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 7.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 19168 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3290 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 115 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.016 ; 0.020 REMARK 3 ANGLE DISTANCE (A) : 0.041 ; 0.030 REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : 0.051 ; 0.050 REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.010 ; 0.020 REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.155 ; 0.150 REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : 0.210 ; 0.400 REMARK 3 MULTIPLE TORSION (A) : 0.250 ; 0.400 REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : 0.230 ; 0.400 REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : 5.400 ; 3.000 REMARK 3 STAGGERED (DEGREES) : 21.100; 15.000 REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 0.861 ; 1.000 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.530 ; 1.500 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.390 ; 1.500 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.200 ; 2.000 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 D44.1 IS CRYSTALLIZED AS THE FAB. CHAIN A INCLUDES THE REMARK 3 VL AND CL DOMAINS. CHAIN B INCLUDES THE VH AND CH1 REMARK 3 DOMAINS. CHAIN B RESIDUES 131 - 136, ASP 217 AND THE REMARK 3 C-TERMINAL CYS 218 (ALL IN THE CH1 DOMAIN) HAVE NO REMARK 3 ELECTRON DENSITY AND, THEREFORE, THE ATOMIC POSITIONS FOR REMARK 3 THESE RESIDUES SHOULD BE CONSIDERED ARBITRARY. REMARK 4 REMARK 4 1MLB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000175046. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : SIEMENS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26986 REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 70.0 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.85000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 21.50000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 68.10000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 21.50000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.85000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 68.10000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 VL RESIDUE SER 30 IS IN THE SECOND POSITION OF A II'-TYPE REMARK 400 TURN. VL RESIDUE VAL 51 IS THE SECOND RESIDUE (I+1) OF A REMARK 400 MODIFIED GAMMA TURN (CLASS 3). REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 61 OD1 ASP A 82 2.16 REMARK 500 O SER B 137 OG SER B 188 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 24 CB ARG A 24 CG 0.451 REMARK 500 ARG A 24 CG ARG A 24 CD 0.504 REMARK 500 ARG A 24 CD ARG A 24 NE 1.204 REMARK 500 ARG A 24 NE ARG A 24 CZ 0.174 REMARK 500 ARG A 24 CZ ARG A 24 NH2 -0.148 REMARK 500 ARG A 188 NE ARG A 188 CZ 0.498 REMARK 500 ARG A 188 CZ ARG A 188 NH1 -0.302 REMARK 500 ARG B 191 CB ARG B 191 CG 0.697 REMARK 500 ARG B 191 NE ARG B 191 CZ -0.366 REMARK 500 ARG B 191 CZ ARG B 191 NH1 -0.078 REMARK 500 ARG B 191 CZ ARG B 191 NH2 -0.442 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 24 CA - CB - CG ANGL. DEV. = 18.9 DEGREES REMARK 500 ARG A 24 CB - CG - CD ANGL. DEV. = -61.1 DEGREES REMARK 500 ARG A 24 NH1 - CZ - NH2 ANGL. DEV. = 18.2 DEGREES REMARK 500 ARG A 24 NE - CZ - NH2 ANGL. DEV. = -50.2 DEGREES REMARK 500 ARG A 45 CA - CB - CG ANGL. DEV. = 13.8 DEGREES REMARK 500 LEU A 46 CA - CB - CG ANGL. DEV. = 15.3 DEGREES REMARK 500 ARG A 61 NH1 - CZ - NH2 ANGL. DEV. = -6.9 DEGREES REMARK 500 ARG A 61 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 GLU A 79 CG - CD - OE1 ANGL. DEV. = 13.1 DEGREES REMARK 500 THR A 80 N - CA - CB ANGL. DEV. = 12.1 DEGREES REMARK 500 GLU A 81 OE1 - CD - OE2 ANGL. DEV. = 10.8 DEGREES REMARK 500 ASP A 82 CB - CG - OD1 ANGL. DEV. = -6.1 DEGREES REMARK 500 ASP A 82 CB - CG - OD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 MET A 85 N - CA - CB ANGL. DEV. = -11.6 DEGREES REMARK 500 ARG A 96 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 THR A 102 O - C - N ANGL. DEV. = 10.2 DEGREES REMARK 500 ARG A 108 NE - CZ - NH1 ANGL. DEV. = 11.6 DEGREES REMARK 500 ARG A 108 NE - CZ - NH2 ANGL. DEV. = -6.4 DEGREES REMARK 500 TYR A 140 CB - CG - CD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 TYR A 140 CB - CG - CD1 ANGL. DEV. = -6.2 DEGREES REMARK 500 ASP A 143 CB - CG - OD1 ANGL. DEV. = -5.5 DEGREES REMARK 500 ASP A 151 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG A 188 NH1 - CZ - NH2 ANGL. DEV. = 14.1 DEGREES REMARK 500 ARG A 188 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG A 188 NE - CZ - NH1 ANGL. DEV. = -11.0 DEGREES REMARK 500 ARG A 188 NE - CZ - NH2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG A 188 NE - CZ - NH2 ANGL. DEV. = -26.4 DEGREES REMARK 500 ARG A 211 NE - CZ - NH1 ANGL. DEV. = 8.2 DEGREES REMARK 500 ARG A 211 NE - CZ - NH2 ANGL. DEV. = -8.8 DEGREES REMARK 500 MET B 12 CG - SD - CE ANGL. DEV. = 12.3 DEGREES REMARK 500 MET B 12 O - C - N ANGL. DEV. = 10.1 DEGREES REMARK 500 GLU B 46 OE1 - CD - OE2 ANGL. DEV. = 9.3 DEGREES REMARK 500 ALA B 79 CB - CA - C ANGL. DEV. = 9.7 DEGREES REMARK 500 MET B 81 CG - SD - CE ANGL. DEV. = 9.8 DEGREES REMARK 500 SER B 88 O - C - N ANGL. DEV. = 10.5 DEGREES REMARK 500 TYR B 94 CB - CG - CD2 ANGL. DEV. = 3.7 DEGREES REMARK 500 TYR B 94 CB - CG - CD1 ANGL. DEV. = -6.1 DEGREES REMARK 500 ARG B 98 NH1 - CZ - NH2 ANGL. DEV. = 6.9 DEGREES REMARK 500 ARG B 98 NE - CZ - NH2 ANGL. DEV. = -4.8 DEGREES REMARK 500 TYR B 105 CB - CG - CD1 ANGL. DEV. = -4.8 DEGREES REMARK 500 LEU B 141 CA - CB - CG ANGL. DEV. = 14.0 DEGREES REMARK 500 PRO B 152 N - CA - CB ANGL. DEV. = -8.1 DEGREES REMARK 500 ASP B 176 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 LEU B 177 CB - CA - C ANGL. DEV. = 11.6 DEGREES REMARK 500 ARG B 191 CA - CB - CG ANGL. DEV. = 25.8 DEGREES REMARK 500 ARG B 191 CB - CG - CD ANGL. DEV. = -29.8 DEGREES REMARK 500 ARG B 191 CG - CD - NE ANGL. DEV. = -34.2 DEGREES REMARK 500 ARG B 191 CD - NE - CZ ANGL. DEV. = 11.0 DEGREES REMARK 500 ARG B 191 NH1 - CZ - NH2 ANGL. DEV. = 18.3 DEGREES REMARK 500 ARG B 191 NE - CZ - NH1 ANGL. DEV. = -19.7 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 52 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 30 -121.53 60.78 REMARK 500 VAL A 51 -54.68 72.97 REMARK 500 SER A 67 130.59 165.23 REMARK 500 SER A 77 90.94 85.35 REMARK 500 ASP A 110 137.87 -23.86 REMARK 500 ASN A 138 72.56 40.39 REMARK 500 PRO A 141 -176.78 -66.07 REMARK 500 ILE A 144 135.95 -173.10 REMARK 500 SER A 171 15.35 57.30 REMARK 500 PRO B 41 103.86 -45.38 REMARK 500 HIS B 43 25.76 -164.17 REMARK 500 LYS B 65 -74.03 -36.47 REMARK 500 ALA B 92 175.03 177.71 REMARK 500 ASP B 100 27.10 -168.31 REMARK 500 ALA B 133 18.83 58.41 REMARK 500 ASN B 136 -171.21 176.10 REMARK 500 LEU B 162 95.66 -68.02 REMARK 500 SER B 188 0.46 -60.41 REMARK 500 PRO B 190 -85.84 -53.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 24 0.42 SIDE CHAIN REMARK 500 ARG A 188 0.13 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 1MLB A 109 214 UNP P01837 KAC_MOUSE 1 106 DBREF 1MLB B 2 218 PIR PC4202 PC4202 2 214 SEQADV 1MLB GLN B 5 PIR PC4202 VAL 5 CONFLICT SEQADV 1MLB VAL B 11 PIR PC4202 LEU 11 CONFLICT SEQADV 1MLB GLY B 26 PIR PC4202 ASP 26 CONFLICT SEQADV 1MLB THR B 28 PIR PC4202 ARG 28 CONFLICT SEQADV 1MLB THR B 31 PIR PC4202 SER 31 CONFLICT SEQADV 1MLB GLU B 50 PIR PC4202 ASP 50 CONFLICT SEQADV 1MLB SER B 57 PIR PC4202 ASN 57 CONFLICT SEQADV 1MLB TYR B 59 PIR PC4202 ASN 59 CONFLICT SEQADV 1MLB LYS B 63 PIR PC4202 ARG 63 CONFLICT SEQADV 1MLB ARG B 98 PIR PC4202 ILE 98 CONFLICT SEQADV 1MLB GLY B 99 PIR PC4202 PRO 99 CONFLICT SEQADV 1MLB GLY B 101 PIR PC4202 INSERTION SEQADV 1MLB ASN B 102 PIR PC4202 INSERTION SEQADV 1MLB TYR B 103 PIR PC4202 INSERTION SEQADV 1MLB GLY B 104 PIR PC4202 INSERTION SEQADV 1MLB SER B 118 PIR PC4202 LYS 114 CONFLICT SEQADV 1MLB PHE B 125 PIR PC4202 TYR 121 CONFLICT SEQRES 1 A 214 ASP ILE GLU LEU THR GLN SER PRO ALA THR LEU SER VAL SEQRES 2 A 214 THR PRO GLY ASP SER VAL SER LEU SER CYS ARG ALA SER SEQRES 3 A 214 GLN SER ILE SER ASN ASN LEU HIS TRP TYR GLN GLN LYS SEQRES 4 A 214 SER HIS GLU SER PRO ARG LEU LEU ILE LYS TYR VAL SER SEQRES 5 A 214 GLN SER SER SER GLY ILE PRO SER ARG PHE SER GLY SER SEQRES 6 A 214 GLY SER GLY THR ASP PHE THR LEU SER ILE ASN SER VAL SEQRES 7 A 214 GLU THR GLU ASP PHE GLY MET TYR PHE CYS GLN GLN SER SEQRES 8 A 214 ASN SER TRP PRO ARG THR PHE GLY GLY GLY THR LYS LEU SEQRES 9 A 214 GLU ILE LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE SEQRES 10 A 214 PHE PRO PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SEQRES 11 A 214 SER VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP SEQRES 12 A 214 ILE ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN SEQRES 13 A 214 ASN GLY VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS SEQRES 14 A 214 ASP SER THR TYR SER MET SER SER THR LEU THR LEU THR SEQRES 15 A 214 LYS ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU SEQRES 16 A 214 ALA THR HIS LYS THR SER THR SER PRO ILE VAL LYS SER SEQRES 17 A 214 PHE ASN ARG ASN GLU CYS SEQRES 1 B 218 GLN VAL GLN LEU GLN GLU SER GLY ALA GLU VAL MET LYS SEQRES 2 B 218 PRO GLY ALA SER VAL LYS ILE SER CYS LYS ALA THR GLY SEQRES 3 B 218 TYR THR PHE SER THR TYR TRP ILE GLU TRP VAL LYS GLN SEQRES 4 B 218 ARG PRO GLY HIS GLY LEU GLU TRP ILE GLY GLU ILE LEU SEQRES 5 B 218 PRO GLY SER GLY SER THR TYR TYR ASN GLU LYS PHE LYS SEQRES 6 B 218 GLY LYS ALA THR PHE THR ALA ASP THR SER SER ASN THR SEQRES 7 B 218 ALA TYR MET GLN LEU SER SER LEU THR SER GLU ASP SER SEQRES 8 B 218 ALA VAL TYR TYR CYS ALA ARG GLY ASP GLY ASN TYR GLY SEQRES 9 B 218 TYR TRP GLY GLN GLY THR THR LEU THR VAL SER SER ALA SEQRES 10 B 218 SER THR THR PRO PRO SER VAL PHE PRO LEU ALA PRO GLY SEQRES 11 B 218 SER ALA ALA GLN THR ASN SER MET VAL THR LEU GLY CYS SEQRES 12 B 218 LEU VAL LYS GLY TYR PHE PRO GLU PRO VAL THR VAL THR SEQRES 13 B 218 TRP ASN SER GLY SER LEU SER SER GLY VAL HIS THR PHE SEQRES 14 B 218 PRO ALA VAL LEU GLN SER ASP LEU TYR THR LEU SER SER SEQRES 15 B 218 SER VAL THR VAL PRO SER SER PRO ARG PRO SER GLU THR SEQRES 16 B 218 VAL THR CYS ASN VAL ALA HIS PRO ALA SER SER THR LYS SEQRES 17 B 218 VAL ASP LYS LYS ILE VAL PRO ARG ASP CYS FORMUL 3 HOH *115(H2 O) HELIX 1 1 THR A 80 ASP A 82 5 3 HELIX 2 2 SER A 122 SER A 127 1 6 HELIX 3 3 LYS A 183 ARG A 188 1 6 HELIX 4 4 GLU B 62 PHE B 64 5 3 HELIX 5 5 SER B 88 ASP B 90 5 3 HELIX 6 6 ASN B 158 GLY B 160 5 3 SHEET 1 A 4 LEU A 4 SER A 7 0 SHEET 2 A 4 VAL A 19 ALA A 25 -1 N ARG A 24 O THR A 5 SHEET 3 A 4 ASP A 70 ILE A 75 -1 N ILE A 75 O VAL A 19 SHEET 4 A 4 PHE A 62 SER A 67 -1 N SER A 67 O ASP A 70 SHEET 1 B 5 THR A 10 VAL A 13 0 SHEET 2 B 5 THR A 102 ILE A 106 1 N LYS A 103 O LEU A 11 SHEET 3 B 5 GLY A 84 GLN A 90 -1 N TYR A 86 O THR A 102 SHEET 4 B 5 LEU A 33 GLN A 38 -1 N GLN A 38 O MET A 85 SHEET 5 B 5 ARG A 45 ILE A 48 -1 N ILE A 48 O TRP A 35 SHEET 1 C 4 THR A 114 PHE A 118 0 SHEET 2 C 4 GLY A 129 ASN A 137 -1 N ASN A 137 O THR A 114 SHEET 3 C 4 MET A 175 THR A 182 -1 N LEU A 181 O ALA A 130 SHEET 4 C 4 VAL A 159 TRP A 163 -1 N SER A 162 O SER A 176 SHEET 1 D 4 SER A 153 ARG A 155 0 SHEET 2 D 4 ASN A 145 ILE A 150 -1 N ILE A 150 O SER A 153 SHEET 3 D 4 SER A 191 THR A 197 -1 N THR A 197 O ASN A 145 SHEET 4 D 4 ILE A 205 ASN A 210 -1 N PHE A 209 O TYR A 192 SHEET 1 E 4 GLN B 3 GLU B 6 0 SHEET 2 E 4 VAL B 18 THR B 25 -1 N THR B 25 O GLN B 3 SHEET 3 E 4 THR B 78 LEU B 83 -1 N LEU B 83 O VAL B 18 SHEET 4 E 4 ALA B 68 ASP B 73 -1 N ASP B 73 O THR B 78 SHEET 1 F 6 GLU B 10 MET B 12 0 SHEET 2 F 6 THR B 110 VAL B 114 1 N THR B 113 O GLU B 10 SHEET 3 F 6 ALA B 92 ARG B 98 -1 N TYR B 94 O THR B 110 SHEET 4 F 6 TRP B 33 GLN B 39 -1 N GLN B 39 O VAL B 93 SHEET 5 F 6 GLU B 46 LEU B 52 -1 N ILE B 51 O ILE B 34 SHEET 6 F 6 THR B 58 TYR B 60 -1 N TYR B 59 O GLU B 50 SHEET 1 G 3 SER B 123 LEU B 127 0 SHEET 2 G 3 MET B 138 TYR B 148 -1 N LYS B 146 O SER B 123 SHEET 3 G 3 TYR B 178 PRO B 187 -1 N VAL B 186 O VAL B 139 SHEET 1 H 3 THR B 154 TRP B 157 0 SHEET 2 H 3 THR B 197 HIS B 202 -1 N ALA B 201 O THR B 154 SHEET 3 H 3 THR B 207 LYS B 212 -1 N LYS B 211 O CYS B 198 SSBOND 1 CYS A 23 CYS A 88 1555 1555 1.93 SSBOND 2 CYS A 134 CYS A 194 1555 1555 2.02 SSBOND 3 CYS B 22 CYS B 96 1555 1555 1.94 SSBOND 4 CYS B 143 CYS B 198 1555 1555 2.02 CISPEP 1 SER A 7 PRO A 8 0 1.34 CISPEP 2 TRP A 94 PRO A 95 0 -2.61 CISPEP 3 TYR A 140 PRO A 141 0 0.05 CISPEP 4 PHE B 149 PRO B 150 0 2.12 CISPEP 5 GLU B 151 PRO B 152 0 0.19 CISPEP 6 ARG B 191 PRO B 192 0 -9.68 CRYST1 79.700 136.200 43.000 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012547 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007342 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023256 0.00000