data_1MN4 # _entry.id 1MN4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1MN4 RCSB RCSB017029 WWPDB D_1000017029 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1MN4 _pdbx_database_status.recvd_initial_deposition_date 2002-09-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lamoureux, J.S.' 1 'Stuart, D.' 2 'Tsang, R.' 3 'Wu, C.' 4 'Glover, J.N.M.' 5 # _citation.id primary _citation.title 'Structure of the sporulation-specific transcription factor Ndt80 bound to DNA' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 21 _citation.page_first 5721 _citation.page_last 5732 _citation.year 2002 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12411490 _citation.pdbx_database_id_DOI 10.1093/emboj/cdf572 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Lamoureux, J.S.' 1 primary 'Stuart, D.' 2 primary 'Tsang, R.' 3 primary 'Wu, C.' 4 primary 'Glover, J.N.M.' 5 # _cell.entry_id 1MN4 _cell.length_a 35.880 _cell.length_b 41.930 _cell.length_c 164.500 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MN4 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'NDT80 PROTEIN' 32385.701 1 ? ? 'DNA-binding core (Residues 59-340)' ? 2 water nat water 18.015 89 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;STLQFKVGPPFELVRDYCPVVESHTGRTLDLRIIPRIDRGFDHIDEEWVGYKRSYFTLVSTFETANCDLDTFLKSSFDLL VEDSSVEGRLRVQYFAIKIKAKNDDDDTEINLVQHTAKRDKGPQFCPSVCPLVPSPLPKHQIIREASNVRNITKMKKYDS TFYLHRDHVNYEEYGVDSLLFSYPEDSIQKVARYERVQFASSISVKKPSQQNKHFSLHVILGAVVDPDTFHGENPGIPYD ELALKNGSKGMFVYLQEMKTPPLIIRGRSPSNYASSQRITVR ; _entity_poly.pdbx_seq_one_letter_code_can ;STLQFKVGPPFELVRDYCPVVESHTGRTLDLRIIPRIDRGFDHIDEEWVGYKRSYFTLVSTFETANCDLDTFLKSSFDLL VEDSSVEGRLRVQYFAIKIKAKNDDDDTEINLVQHTAKRDKGPQFCPSVCPLVPSPLPKHQIIREASNVRNITKMKKYDS TFYLHRDHVNYEEYGVDSLLFSYPEDSIQKVARYERVQFASSISVKKPSQQNKHFSLHVILGAVVDPDTFHGENPGIPYD ELALKNGSKGMFVYLQEMKTPPLIIRGRSPSNYASSQRITVR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 THR n 1 3 LEU n 1 4 GLN n 1 5 PHE n 1 6 LYS n 1 7 VAL n 1 8 GLY n 1 9 PRO n 1 10 PRO n 1 11 PHE n 1 12 GLU n 1 13 LEU n 1 14 VAL n 1 15 ARG n 1 16 ASP n 1 17 TYR n 1 18 CYS n 1 19 PRO n 1 20 VAL n 1 21 VAL n 1 22 GLU n 1 23 SER n 1 24 HIS n 1 25 THR n 1 26 GLY n 1 27 ARG n 1 28 THR n 1 29 LEU n 1 30 ASP n 1 31 LEU n 1 32 ARG n 1 33 ILE n 1 34 ILE n 1 35 PRO n 1 36 ARG n 1 37 ILE n 1 38 ASP n 1 39 ARG n 1 40 GLY n 1 41 PHE n 1 42 ASP n 1 43 HIS n 1 44 ILE n 1 45 ASP n 1 46 GLU n 1 47 GLU n 1 48 TRP n 1 49 VAL n 1 50 GLY n 1 51 TYR n 1 52 LYS n 1 53 ARG n 1 54 SER n 1 55 TYR n 1 56 PHE n 1 57 THR n 1 58 LEU n 1 59 VAL n 1 60 SER n 1 61 THR n 1 62 PHE n 1 63 GLU n 1 64 THR n 1 65 ALA n 1 66 ASN n 1 67 CYS n 1 68 ASP n 1 69 LEU n 1 70 ASP n 1 71 THR n 1 72 PHE n 1 73 LEU n 1 74 LYS n 1 75 SER n 1 76 SER n 1 77 PHE n 1 78 ASP n 1 79 LEU n 1 80 LEU n 1 81 VAL n 1 82 GLU n 1 83 ASP n 1 84 SER n 1 85 SER n 1 86 VAL n 1 87 GLU n 1 88 GLY n 1 89 ARG n 1 90 LEU n 1 91 ARG n 1 92 VAL n 1 93 GLN n 1 94 TYR n 1 95 PHE n 1 96 ALA n 1 97 ILE n 1 98 LYS n 1 99 ILE n 1 100 LYS n 1 101 ALA n 1 102 LYS n 1 103 ASN n 1 104 ASP n 1 105 ASP n 1 106 ASP n 1 107 ASP n 1 108 THR n 1 109 GLU n 1 110 ILE n 1 111 ASN n 1 112 LEU n 1 113 VAL n 1 114 GLN n 1 115 HIS n 1 116 THR n 1 117 ALA n 1 118 LYS n 1 119 ARG n 1 120 ASP n 1 121 LYS n 1 122 GLY n 1 123 PRO n 1 124 GLN n 1 125 PHE n 1 126 CYS n 1 127 PRO n 1 128 SER n 1 129 VAL n 1 130 CYS n 1 131 PRO n 1 132 LEU n 1 133 VAL n 1 134 PRO n 1 135 SER n 1 136 PRO n 1 137 LEU n 1 138 PRO n 1 139 LYS n 1 140 HIS n 1 141 GLN n 1 142 ILE n 1 143 ILE n 1 144 ARG n 1 145 GLU n 1 146 ALA n 1 147 SER n 1 148 ASN n 1 149 VAL n 1 150 ARG n 1 151 ASN n 1 152 ILE n 1 153 THR n 1 154 LYS n 1 155 MET n 1 156 LYS n 1 157 LYS n 1 158 TYR n 1 159 ASP n 1 160 SER n 1 161 THR n 1 162 PHE n 1 163 TYR n 1 164 LEU n 1 165 HIS n 1 166 ARG n 1 167 ASP n 1 168 HIS n 1 169 VAL n 1 170 ASN n 1 171 TYR n 1 172 GLU n 1 173 GLU n 1 174 TYR n 1 175 GLY n 1 176 VAL n 1 177 ASP n 1 178 SER n 1 179 LEU n 1 180 LEU n 1 181 PHE n 1 182 SER n 1 183 TYR n 1 184 PRO n 1 185 GLU n 1 186 ASP n 1 187 SER n 1 188 ILE n 1 189 GLN n 1 190 LYS n 1 191 VAL n 1 192 ALA n 1 193 ARG n 1 194 TYR n 1 195 GLU n 1 196 ARG n 1 197 VAL n 1 198 GLN n 1 199 PHE n 1 200 ALA n 1 201 SER n 1 202 SER n 1 203 ILE n 1 204 SER n 1 205 VAL n 1 206 LYS n 1 207 LYS n 1 208 PRO n 1 209 SER n 1 210 GLN n 1 211 GLN n 1 212 ASN n 1 213 LYS n 1 214 HIS n 1 215 PHE n 1 216 SER n 1 217 LEU n 1 218 HIS n 1 219 VAL n 1 220 ILE n 1 221 LEU n 1 222 GLY n 1 223 ALA n 1 224 VAL n 1 225 VAL n 1 226 ASP n 1 227 PRO n 1 228 ASP n 1 229 THR n 1 230 PHE n 1 231 HIS n 1 232 GLY n 1 233 GLU n 1 234 ASN n 1 235 PRO n 1 236 GLY n 1 237 ILE n 1 238 PRO n 1 239 TYR n 1 240 ASP n 1 241 GLU n 1 242 LEU n 1 243 ALA n 1 244 LEU n 1 245 LYS n 1 246 ASN n 1 247 GLY n 1 248 SER n 1 249 LYS n 1 250 GLY n 1 251 MET n 1 252 PHE n 1 253 VAL n 1 254 TYR n 1 255 LEU n 1 256 GLN n 1 257 GLU n 1 258 MET n 1 259 LYS n 1 260 THR n 1 261 PRO n 1 262 PRO n 1 263 LEU n 1 264 ILE n 1 265 ILE n 1 266 ARG n 1 267 GLY n 1 268 ARG n 1 269 SER n 1 270 PRO n 1 271 SER n 1 272 ASN n 1 273 TYR n 1 274 ALA n 1 275 SER n 1 276 SER n 1 277 GLN n 1 278 ARG n 1 279 ILE n 1 280 THR n 1 281 VAL n 1 282 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;baker's yeast ; _entity_src_gen.gene_src_genus Saccharomyces _entity_src_gen.pdbx_gene_src_gene NDT80 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-6P1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NDT80_YEAST _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;STLQFKVGPPFELVRDYCPVVESHTGRTLDLRIIPRIDRGFDHIDEEWVGYKRNYFTLVSTFETANCDLDTFLKSSFDLL VEDSSVESRLRVQYFAIKIKAKNDDDDTEINLVQHTAKRDKGPQFCPSVCPLVPSPLPKHQIIREASNVRNITKMKKYDS TFYLHRDHVNYEEYGVDSLLFSYPEDSIQKVARYERVQFASSISVKKPSQQNKHFSLHVILGAVVDPDTFHGENPGIPYD ELALKNGSKGMFVYLQEMKTPPLIIRGRSPSNYASSQRITVR ; _struct_ref.pdbx_align_begin 59 _struct_ref.pdbx_db_accession P38830 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1MN4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 282 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P38830 _struct_ref_seq.db_align_beg 59 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 340 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 59 _struct_ref_seq.pdbx_auth_seq_align_end 340 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1MN4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 35.58 _exptl_crystal.density_Matthews 1.91 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details 'PEG 4000, sodium acetate, magnesium chloride, spermine, 20mer DNA, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 105 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2002-05-21 _diffrn_detector.details 'bent cylindrical Si-mirror (Rh coating)' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) double-crystal' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9563 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 14-BM-D' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 14-BM-D _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9563 # _reflns.entry_id 1MN4 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3 _reflns.d_resolution_high 2.2 _reflns.d_resolution_low 14.95 _reflns.number_all 12530 _reflns.number_obs 13292 _reflns.percent_possible_obs 98.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.0760000 _reflns.pdbx_netI_over_sigmaI 20.9 _reflns.B_iso_Wilson_estimate 14.3 _reflns.pdbx_redundancy 11.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.25 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.2210000 _reflns_shell.meanI_over_sigI_obs 7.9 _reflns_shell.pdbx_redundancy 5.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1MN4 _refine.ls_d_res_high 2.2 _refine.ls_d_res_low 14.95 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all 13291 _refine.ls_number_reflns_obs 13086 _refine.ls_number_reflns_R_free 626 _refine.ls_percent_reflns_obs 98.5 _refine.ls_R_factor_all 0.2290000 _refine.ls_R_factor_obs 0.2290000 _refine.ls_R_factor_R_work 0.2260000 _refine.ls_R_factor_R_free 0.2680000 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model anisotropic _refine.B_iso_mean ? _refine.aniso_B[1][1] 5.73 _refine.aniso_B[1][2] -1.32 _refine.aniso_B[1][3] -4.41 _refine.aniso_B[2][2] 0 _refine.aniso_B[2][3] 0 _refine.aniso_B[3][3] 0 _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1MN4 _refine_analyze.Luzzati_coordinate_error_obs 0.27 _refine_analyze.Luzzati_sigma_a_obs 0.21 _refine_analyze.Luzzati_d_res_low_obs 5.0 _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1989 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 89 _refine_hist.number_atoms_total 2078 _refine_hist.d_res_high 2.2 _refine_hist.d_res_low 14.95 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.837 1.5 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.290 2 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 3.177 2 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.524 2.5 ? ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 dna-rna_rep.param dna-rna.top 'X-RAY DIFFRACTION' 3 water_rep.param water.top 'X-RAY DIFFRACTION' 4 ion.param ion.top 'X-RAY DIFFRACTION' # _struct.entry_id 1MN4 _struct.title 'Structure of Ndt80 (Residues 59-340) DNA-binding domain core' _struct.pdbx_descriptor 'NDT80 protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1MN4 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'IG FOLD, PROTEIN-DNA COMPLEX, TRANSCRIPTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 68 ? SER A 75 ? ASP A 126 SER A 133 1 ? 8 HELX_P HELX_P2 2 LYS A 139 ? SER A 147 ? LYS A 197 SER A 205 1 ? 9 HELX_P HELX_P3 3 ASN A 151 ? LYS A 156 ? ASN A 209 LYS A 214 1 ? 6 HELX_P HELX_P4 4 TYR A 158 ? PHE A 162 ? TYR A 216 PHE A 220 1 ? 5 HELX_P HELX_P5 5 ASP A 167 ? VAL A 169 ? ASP A 225 VAL A 227 5 ? 3 HELX_P HELX_P6 6 ASN A 170 ? TYR A 174 ? ASN A 228 TYR A 232 5 ? 5 HELX_P HELX_P7 7 SER A 178 ? TYR A 183 ? SER A 236 TYR A 241 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 12 ? B ? 4 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 239 ? ALA A 243 ? TYR A 297 ALA A 301 A 2 LYS A 249 ? LYS A 259 ? LYS A 307 LYS A 317 A 3 GLU A 12 ? ASP A 16 ? GLU A 70 ASP A 74 A 4 LYS A 249 ? LYS A 259 ? LYS A 307 LYS A 317 A 5 PHE A 215 ? VAL A 225 ? PHE A 273 VAL A 283 A 6 ARG A 89 ? ASN A 103 ? ARG A 147 ASN A 161 A 7 CYS A 130 ? PRO A 131 ? CYS A 188 PRO A 189 A 8 ARG A 89 ? ASN A 103 ? ARG A 147 ASN A 161 A 9 GLU A 109 ? ILE A 110 ? GLU A 167 ILE A 168 A 10 ARG A 89 ? ASN A 103 ? ARG A 147 ASN A 161 A 11 PHE A 77 ? LEU A 80 ? PHE A 135 LEU A 138 A 12 VAL A 20 ? GLU A 22 ? VAL A 78 GLU A 80 B 1 LEU A 112 ? GLN A 114 ? LEU A 170 GLN A 172 B 2 ALA A 192 ? PHE A 199 ? ALA A 250 PHE A 257 B 3 PHE A 56 ? THR A 64 ? PHE A 114 THR A 122 B 4 LEU A 31 ? ARG A 39 ? LEU A 89 ARG A 97 C 1 ASP A 42 ? HIS A 43 ? ASP A 100 HIS A 101 C 2 TRP A 48 ? TYR A 51 ? TRP A 106 TYR A 109 C 3 LEU A 263 ? ARG A 266 ? LEU A 321 ARG A 324 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 242 ? O LEU A 300 N GLY A 250 ? N GLY A 308 A 2 3 O LYS A 259 ? O LYS A 317 N GLU A 12 ? N GLU A 70 A 3 4 N VAL A 14 ? N VAL A 72 O GLU A 257 ? O GLU A 315 A 4 5 O MET A 258 ? O MET A 316 N VAL A 219 ? N VAL A 277 A 5 6 O VAL A 224 ? O VAL A 282 N GLN A 93 ? N GLN A 151 A 6 7 O ILE A 97 ? O ILE A 155 N CYS A 130 ? N CYS A 188 A 7 8 N CYS A 130 ? N CYS A 188 O ILE A 97 ? O ILE A 155 A 8 9 O ALA A 101 ? O ALA A 159 N ILE A 110 ? N ILE A 168 A 9 10 N ILE A 110 ? N ILE A 168 O ALA A 101 ? O ALA A 159 A 10 11 N VAL A 92 ? N VAL A 150 O PHE A 77 ? O PHE A 135 A 11 12 N ASP A 78 ? N ASP A 136 O VAL A 21 ? O VAL A 79 B 1 2 N VAL A 113 ? N VAL A 171 O GLN A 198 ? O GLN A 256 B 2 3 O VAL A 197 ? O VAL A 255 N PHE A 56 ? N PHE A 114 B 3 4 N GLU A 63 ? N GLU A 121 O ARG A 32 ? O ARG A 90 C 1 2 O ASP A 42 ? O ASP A 100 N VAL A 49 ? N VAL A 107 C 2 3 N GLY A 50 ? N GLY A 108 O ILE A 264 ? O ILE A 322 # _database_PDB_matrix.entry_id 1MN4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1MN4 _atom_sites.fract_transf_matrix[1][1] 0.027871 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023849 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006079 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 59 ? ? ? A . n A 1 2 THR 2 60 ? ? ? A . n A 1 3 LEU 3 61 ? ? ? A . n A 1 4 GLN 4 62 ? ? ? A . n A 1 5 PHE 5 63 63 PHE PHE A . n A 1 6 LYS 6 64 64 LYS LYS A . n A 1 7 VAL 7 65 65 VAL VAL A . n A 1 8 GLY 8 66 66 GLY GLY A . n A 1 9 PRO 9 67 67 PRO PRO A . n A 1 10 PRO 10 68 68 PRO PRO A . n A 1 11 PHE 11 69 69 PHE PHE A . n A 1 12 GLU 12 70 70 GLU GLU A . n A 1 13 LEU 13 71 71 LEU LEU A . n A 1 14 VAL 14 72 72 VAL VAL A . n A 1 15 ARG 15 73 73 ARG ARG A . n A 1 16 ASP 16 74 74 ASP ASP A . n A 1 17 TYR 17 75 75 TYR TYR A . n A 1 18 CYS 18 76 76 CYS CYS A . n A 1 19 PRO 19 77 77 PRO PRO A . n A 1 20 VAL 20 78 78 VAL VAL A . n A 1 21 VAL 21 79 79 VAL VAL A . n A 1 22 GLU 22 80 80 GLU GLU A . n A 1 23 SER 23 81 81 SER SER A . n A 1 24 HIS 24 82 82 HIS HIS A . n A 1 25 THR 25 83 83 THR THR A . n A 1 26 GLY 26 84 84 GLY GLY A . n A 1 27 ARG 27 85 85 ARG ARG A . n A 1 28 THR 28 86 86 THR THR A . n A 1 29 LEU 29 87 87 LEU LEU A . n A 1 30 ASP 30 88 88 ASP ASP A . n A 1 31 LEU 31 89 89 LEU LEU A . n A 1 32 ARG 32 90 90 ARG ARG A . n A 1 33 ILE 33 91 91 ILE ILE A . n A 1 34 ILE 34 92 92 ILE ILE A . n A 1 35 PRO 35 93 93 PRO PRO A . n A 1 36 ARG 36 94 94 ARG ARG A . n A 1 37 ILE 37 95 95 ILE ILE A . n A 1 38 ASP 38 96 96 ASP ASP A . n A 1 39 ARG 39 97 97 ARG ARG A . n A 1 40 GLY 40 98 98 GLY GLY A . n A 1 41 PHE 41 99 99 PHE PHE A . n A 1 42 ASP 42 100 100 ASP ASP A . n A 1 43 HIS 43 101 101 HIS HIS A . n A 1 44 ILE 44 102 102 ILE ILE A . n A 1 45 ASP 45 103 103 ASP ASP A . n A 1 46 GLU 46 104 104 GLU GLU A . n A 1 47 GLU 47 105 105 GLU GLU A . n A 1 48 TRP 48 106 106 TRP TRP A . n A 1 49 VAL 49 107 107 VAL VAL A . n A 1 50 GLY 50 108 108 GLY GLY A . n A 1 51 TYR 51 109 109 TYR TYR A . n A 1 52 LYS 52 110 110 LYS LYS A . n A 1 53 ARG 53 111 111 ARG ARG A . n A 1 54 SER 54 112 112 SER SER A . n A 1 55 TYR 55 113 113 TYR TYR A . n A 1 56 PHE 56 114 114 PHE PHE A . n A 1 57 THR 57 115 115 THR THR A . n A 1 58 LEU 58 116 116 LEU LEU A . n A 1 59 VAL 59 117 117 VAL VAL A . n A 1 60 SER 60 118 118 SER SER A . n A 1 61 THR 61 119 119 THR THR A . n A 1 62 PHE 62 120 120 PHE PHE A . n A 1 63 GLU 63 121 121 GLU GLU A . n A 1 64 THR 64 122 122 THR THR A . n A 1 65 ALA 65 123 123 ALA ALA A . n A 1 66 ASN 66 124 124 ASN ASN A . n A 1 67 CYS 67 125 125 CYS CYS A . n A 1 68 ASP 68 126 126 ASP ASP A . n A 1 69 LEU 69 127 127 LEU LEU A . n A 1 70 ASP 70 128 128 ASP ASP A . n A 1 71 THR 71 129 129 THR THR A . n A 1 72 PHE 72 130 130 PHE PHE A . n A 1 73 LEU 73 131 131 LEU LEU A . n A 1 74 LYS 74 132 132 LYS LYS A . n A 1 75 SER 75 133 133 SER SER A . n A 1 76 SER 76 134 134 SER SER A . n A 1 77 PHE 77 135 135 PHE PHE A . n A 1 78 ASP 78 136 136 ASP ASP A . n A 1 79 LEU 79 137 137 LEU LEU A . n A 1 80 LEU 80 138 138 LEU LEU A . n A 1 81 VAL 81 139 139 VAL VAL A . n A 1 82 GLU 82 140 140 GLU GLU A . n A 1 83 ASP 83 141 141 ASP ASP A . n A 1 84 SER 84 142 142 SER SER A . n A 1 85 SER 85 143 143 SER SER A . n A 1 86 VAL 86 144 144 VAL VAL A . n A 1 87 GLU 87 145 145 GLU GLU A . n A 1 88 GLY 88 146 146 GLY GLY A . n A 1 89 ARG 89 147 147 ARG ARG A . n A 1 90 LEU 90 148 148 LEU LEU A . n A 1 91 ARG 91 149 149 ARG ARG A . n A 1 92 VAL 92 150 150 VAL VAL A . n A 1 93 GLN 93 151 151 GLN GLN A . n A 1 94 TYR 94 152 152 TYR TYR A . n A 1 95 PHE 95 153 153 PHE PHE A . n A 1 96 ALA 96 154 154 ALA ALA A . n A 1 97 ILE 97 155 155 ILE ILE A . n A 1 98 LYS 98 156 156 LYS LYS A . n A 1 99 ILE 99 157 157 ILE ILE A . n A 1 100 LYS 100 158 158 LYS LYS A . n A 1 101 ALA 101 159 159 ALA ALA A . n A 1 102 LYS 102 160 160 LYS LYS A . n A 1 103 ASN 103 161 161 ASN ASN A . n A 1 104 ASP 104 162 162 ASP ASP A . n A 1 105 ASP 105 163 163 ASP ASP A . n A 1 106 ASP 106 164 164 ASP ASP A . n A 1 107 ASP 107 165 165 ASP ASP A . n A 1 108 THR 108 166 166 THR THR A . n A 1 109 GLU 109 167 167 GLU GLU A . n A 1 110 ILE 110 168 168 ILE ILE A . n A 1 111 ASN 111 169 169 ASN ASN A . n A 1 112 LEU 112 170 170 LEU LEU A . n A 1 113 VAL 113 171 171 VAL VAL A . n A 1 114 GLN 114 172 172 GLN GLN A . n A 1 115 HIS 115 173 173 HIS HIS A . n A 1 116 THR 116 174 174 THR THR A . n A 1 117 ALA 117 175 ? ? ? A . n A 1 118 LYS 118 176 ? ? ? A . n A 1 119 ARG 119 177 ? ? ? A . n A 1 120 ASP 120 178 ? ? ? A . n A 1 121 LYS 121 179 ? ? ? A . n A 1 122 GLY 122 180 ? ? ? A . n A 1 123 PRO 123 181 ? ? ? A . n A 1 124 GLN 124 182 ? ? ? A . n A 1 125 PHE 125 183 ? ? ? A . n A 1 126 CYS 126 184 ? ? ? A . n A 1 127 PRO 127 185 185 PRO PRO A . n A 1 128 SER 128 186 186 SER SER A . n A 1 129 VAL 129 187 187 VAL VAL A . n A 1 130 CYS 130 188 188 CYS CYS A . n A 1 131 PRO 131 189 189 PRO PRO A . n A 1 132 LEU 132 190 190 LEU LEU A . n A 1 133 VAL 133 191 191 VAL VAL A . n A 1 134 PRO 134 192 192 PRO PRO A . n A 1 135 SER 135 193 193 SER SER A . n A 1 136 PRO 136 194 194 PRO PRO A . n A 1 137 LEU 137 195 195 LEU LEU A . n A 1 138 PRO 138 196 196 PRO PRO A . n A 1 139 LYS 139 197 197 LYS LYS A . n A 1 140 HIS 140 198 198 HIS HIS A . n A 1 141 GLN 141 199 199 GLN GLN A . n A 1 142 ILE 142 200 200 ILE ILE A . n A 1 143 ILE 143 201 201 ILE ILE A . n A 1 144 ARG 144 202 202 ARG ARG A . n A 1 145 GLU 145 203 203 GLU GLU A . n A 1 146 ALA 146 204 204 ALA ALA A . n A 1 147 SER 147 205 205 SER SER A . n A 1 148 ASN 148 206 206 ASN ASN A . n A 1 149 VAL 149 207 207 VAL VAL A . n A 1 150 ARG 150 208 208 ARG ARG A . n A 1 151 ASN 151 209 209 ASN ASN A . n A 1 152 ILE 152 210 210 ILE ILE A . n A 1 153 THR 153 211 211 THR THR A . n A 1 154 LYS 154 212 212 LYS LYS A . n A 1 155 MET 155 213 213 MET MET A . n A 1 156 LYS 156 214 214 LYS LYS A . n A 1 157 LYS 157 215 215 LYS LYS A . n A 1 158 TYR 158 216 216 TYR TYR A . n A 1 159 ASP 159 217 217 ASP ASP A . n A 1 160 SER 160 218 218 SER SER A . n A 1 161 THR 161 219 219 THR THR A . n A 1 162 PHE 162 220 220 PHE PHE A . n A 1 163 TYR 163 221 221 TYR TYR A . n A 1 164 LEU 164 222 222 LEU LEU A . n A 1 165 HIS 165 223 223 HIS HIS A . n A 1 166 ARG 166 224 224 ARG ARG A . n A 1 167 ASP 167 225 225 ASP ASP A . n A 1 168 HIS 168 226 226 HIS HIS A . n A 1 169 VAL 169 227 227 VAL VAL A . n A 1 170 ASN 170 228 228 ASN ASN A . n A 1 171 TYR 171 229 229 TYR TYR A . n A 1 172 GLU 172 230 230 GLU GLU A . n A 1 173 GLU 173 231 231 GLU GLU A . n A 1 174 TYR 174 232 232 TYR TYR A . n A 1 175 GLY 175 233 233 GLY GLY A . n A 1 176 VAL 176 234 234 VAL VAL A . n A 1 177 ASP 177 235 235 ASP ASP A . n A 1 178 SER 178 236 236 SER SER A . n A 1 179 LEU 179 237 237 LEU LEU A . n A 1 180 LEU 180 238 238 LEU LEU A . n A 1 181 PHE 181 239 239 PHE PHE A . n A 1 182 SER 182 240 240 SER SER A . n A 1 183 TYR 183 241 241 TYR TYR A . n A 1 184 PRO 184 242 242 PRO PRO A . n A 1 185 GLU 185 243 243 GLU GLU A . n A 1 186 ASP 186 244 244 ASP ASP A . n A 1 187 SER 187 245 245 SER SER A . n A 1 188 ILE 188 246 246 ILE ILE A . n A 1 189 GLN 189 247 247 GLN GLN A . n A 1 190 LYS 190 248 248 LYS LYS A . n A 1 191 VAL 191 249 249 VAL VAL A . n A 1 192 ALA 192 250 250 ALA ALA A . n A 1 193 ARG 193 251 251 ARG ARG A . n A 1 194 TYR 194 252 252 TYR TYR A . n A 1 195 GLU 195 253 253 GLU GLU A . n A 1 196 ARG 196 254 254 ARG ARG A . n A 1 197 VAL 197 255 255 VAL VAL A . n A 1 198 GLN 198 256 256 GLN GLN A . n A 1 199 PHE 199 257 257 PHE PHE A . n A 1 200 ALA 200 258 258 ALA ALA A . n A 1 201 SER 201 259 259 SER SER A . n A 1 202 SER 202 260 260 SER SER A . n A 1 203 ILE 203 261 261 ILE ILE A . n A 1 204 SER 204 262 262 SER SER A . n A 1 205 VAL 205 263 263 VAL VAL A . n A 1 206 LYS 206 264 264 LYS LYS A . n A 1 207 LYS 207 265 265 LYS LYS A . n A 1 208 PRO 208 266 266 PRO PRO A . n A 1 209 SER 209 267 267 SER SER A . n A 1 210 GLN 210 268 268 GLN GLN A . n A 1 211 GLN 211 269 269 GLN GLN A . n A 1 212 ASN 212 270 270 ASN ASN A . n A 1 213 LYS 213 271 271 LYS LYS A . n A 1 214 HIS 214 272 272 HIS HIS A . n A 1 215 PHE 215 273 273 PHE PHE A . n A 1 216 SER 216 274 274 SER SER A . n A 1 217 LEU 217 275 275 LEU LEU A . n A 1 218 HIS 218 276 276 HIS HIS A . n A 1 219 VAL 219 277 277 VAL VAL A . n A 1 220 ILE 220 278 278 ILE ILE A . n A 1 221 LEU 221 279 279 LEU LEU A . n A 1 222 GLY 222 280 280 GLY GLY A . n A 1 223 ALA 223 281 281 ALA ALA A . n A 1 224 VAL 224 282 282 VAL VAL A . n A 1 225 VAL 225 283 283 VAL VAL A . n A 1 226 ASP 226 284 284 ASP ASP A . n A 1 227 PRO 227 285 285 PRO PRO A . n A 1 228 ASP 228 286 286 ASP ASP A . n A 1 229 THR 229 287 ? ? ? A . n A 1 230 PHE 230 288 ? ? ? A . n A 1 231 HIS 231 289 ? ? ? A . n A 1 232 GLY 232 290 ? ? ? A . n A 1 233 GLU 233 291 ? ? ? A . n A 1 234 ASN 234 292 ? ? ? A . n A 1 235 PRO 235 293 ? ? ? A . n A 1 236 GLY 236 294 294 GLY GLY A . n A 1 237 ILE 237 295 295 ILE ILE A . n A 1 238 PRO 238 296 296 PRO PRO A . n A 1 239 TYR 239 297 297 TYR TYR A . n A 1 240 ASP 240 298 298 ASP ASP A . n A 1 241 GLU 241 299 299 GLU GLU A . n A 1 242 LEU 242 300 300 LEU LEU A . n A 1 243 ALA 243 301 301 ALA ALA A . n A 1 244 LEU 244 302 302 LEU LEU A . n A 1 245 LYS 245 303 303 LYS LYS A . n A 1 246 ASN 246 304 304 ASN ASN A . n A 1 247 GLY 247 305 305 GLY GLY A . n A 1 248 SER 248 306 306 SER SER A . n A 1 249 LYS 249 307 307 LYS LYS A . n A 1 250 GLY 250 308 308 GLY GLY A . n A 1 251 MET 251 309 309 MET MET A . n A 1 252 PHE 252 310 310 PHE PHE A . n A 1 253 VAL 253 311 311 VAL VAL A . n A 1 254 TYR 254 312 312 TYR TYR A . n A 1 255 LEU 255 313 313 LEU LEU A . n A 1 256 GLN 256 314 314 GLN GLN A . n A 1 257 GLU 257 315 315 GLU GLU A . n A 1 258 MET 258 316 316 MET MET A . n A 1 259 LYS 259 317 317 LYS LYS A . n A 1 260 THR 260 318 318 THR THR A . n A 1 261 PRO 261 319 319 PRO PRO A . n A 1 262 PRO 262 320 320 PRO PRO A . n A 1 263 LEU 263 321 321 LEU LEU A . n A 1 264 ILE 264 322 322 ILE ILE A . n A 1 265 ILE 265 323 323 ILE ILE A . n A 1 266 ARG 266 324 324 ARG ARG A . n A 1 267 GLY 267 325 325 GLY GLY A . n A 1 268 ARG 268 326 ? ? ? A . n A 1 269 SER 269 327 ? ? ? A . n A 1 270 PRO 270 328 ? ? ? A . n A 1 271 SER 271 329 ? ? ? A . n A 1 272 ASN 272 330 ? ? ? A . n A 1 273 TYR 273 331 ? ? ? A . n A 1 274 ALA 274 332 ? ? ? A . n A 1 275 SER 275 333 ? ? ? A . n A 1 276 SER 276 334 ? ? ? A . n A 1 277 GLN 277 335 ? ? ? A . n A 1 278 ARG 278 336 ? ? ? A . n A 1 279 ILE 279 337 ? ? ? A . n A 1 280 THR 280 338 ? ? ? A . n A 1 281 VAL 281 339 ? ? ? A . n A 1 282 ARG 282 340 ? ? ? A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-11-06 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 SHARP phasing . ? 3 CNS refinement 1.0 ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 75 ? ? -107.04 -116.24 2 1 ASP A 103 ? ? 28.81 79.43 3 1 ASP A 141 ? ? 59.39 -109.03 4 1 VAL A 144 ? ? 35.79 20.81 5 1 ASP A 162 ? ? -58.62 -1.32 6 1 ASP A 163 ? ? -102.96 -61.30 7 1 SER A 193 ? ? -176.21 149.72 8 1 GLU A 203 ? ? -48.80 -15.79 9 1 SER A 205 ? ? -58.97 -112.34 10 1 ARG A 208 ? ? -68.15 58.74 11 1 ASP A 225 ? ? -69.29 0.20 12 1 ARG A 254 ? ? 51.62 75.52 13 1 LEU A 302 ? ? -53.06 -159.07 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A GLU 104 ? CG ? A GLU 46 CG 2 1 Y 0 A GLU 104 ? CD ? A GLU 46 CD 3 1 Y 0 A GLU 104 ? OE1 ? A GLU 46 OE1 4 1 Y 0 A GLU 104 ? OE2 ? A GLU 46 OE2 5 1 Y 1 A ARG 208 ? CG ? A ARG 150 CG 6 1 Y 1 A ARG 208 ? CD ? A ARG 150 CD 7 1 Y 1 A ARG 208 ? NE ? A ARG 150 NE 8 1 Y 1 A ARG 208 ? CZ ? A ARG 150 CZ 9 1 Y 1 A ARG 208 ? NH1 ? A ARG 150 NH1 10 1 Y 1 A ARG 208 ? NH2 ? A ARG 150 NH2 11 1 Y 1 A ASP 286 ? CG ? A ASP 228 CG 12 1 Y 1 A ASP 286 ? OD1 ? A ASP 228 OD1 13 1 Y 1 A ASP 286 ? OD2 ? A ASP 228 OD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 59 ? A SER 1 2 1 Y 1 A THR 60 ? A THR 2 3 1 Y 1 A LEU 61 ? A LEU 3 4 1 Y 1 A GLN 62 ? A GLN 4 5 1 Y 1 A ALA 175 ? A ALA 117 6 1 Y 1 A LYS 176 ? A LYS 118 7 1 Y 1 A ARG 177 ? A ARG 119 8 1 Y 1 A ASP 178 ? A ASP 120 9 1 Y 1 A LYS 179 ? A LYS 121 10 1 Y 1 A GLY 180 ? A GLY 122 11 1 Y 1 A PRO 181 ? A PRO 123 12 1 Y 1 A GLN 182 ? A GLN 124 13 1 Y 1 A PHE 183 ? A PHE 125 14 1 Y 1 A CYS 184 ? A CYS 126 15 1 Y 1 A THR 287 ? A THR 229 16 1 Y 1 A PHE 288 ? A PHE 230 17 1 Y 1 A HIS 289 ? A HIS 231 18 1 Y 1 A GLY 290 ? A GLY 232 19 1 Y 1 A GLU 291 ? A GLU 233 20 1 Y 1 A ASN 292 ? A ASN 234 21 1 Y 1 A PRO 293 ? A PRO 235 22 1 Y 1 A ARG 326 ? A ARG 268 23 1 Y 1 A SER 327 ? A SER 269 24 1 Y 1 A PRO 328 ? A PRO 270 25 1 Y 1 A SER 329 ? A SER 271 26 1 Y 1 A ASN 330 ? A ASN 272 27 1 Y 1 A TYR 331 ? A TYR 273 28 1 Y 1 A ALA 332 ? A ALA 274 29 1 Y 1 A SER 333 ? A SER 275 30 1 Y 1 A SER 334 ? A SER 276 31 1 Y 1 A GLN 335 ? A GLN 277 32 1 Y 1 A ARG 336 ? A ARG 278 33 1 Y 1 A ILE 337 ? A ILE 279 34 1 Y 1 A THR 338 ? A THR 280 35 1 Y 1 A VAL 339 ? A VAL 281 36 1 Y 1 A ARG 340 ? A ARG 282 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 341 1 HOH HOH A . B 2 HOH 2 342 2 HOH HOH A . B 2 HOH 3 343 3 HOH HOH A . B 2 HOH 4 344 4 HOH HOH A . B 2 HOH 5 345 5 HOH HOH A . B 2 HOH 6 346 6 HOH HOH A . B 2 HOH 7 347 7 HOH HOH A . B 2 HOH 8 348 8 HOH HOH A . B 2 HOH 9 349 9 HOH HOH A . B 2 HOH 10 350 10 HOH HOH A . B 2 HOH 11 351 12 HOH HOH A . B 2 HOH 12 352 13 HOH HOH A . B 2 HOH 13 353 14 HOH HOH A . B 2 HOH 14 354 17 HOH HOH A . B 2 HOH 15 355 18 HOH HOH A . B 2 HOH 16 356 19 HOH HOH A . B 2 HOH 17 357 20 HOH HOH A . B 2 HOH 18 358 22 HOH HOH A . B 2 HOH 19 359 23 HOH HOH A . B 2 HOH 20 360 24 HOH HOH A . B 2 HOH 21 361 25 HOH HOH A . B 2 HOH 22 362 26 HOH HOH A . B 2 HOH 23 363 30 HOH HOH A . B 2 HOH 24 364 32 HOH HOH A . B 2 HOH 25 365 35 HOH HOH A . B 2 HOH 26 366 37 HOH HOH A . B 2 HOH 27 367 38 HOH HOH A . B 2 HOH 28 368 40 HOH HOH A . B 2 HOH 29 369 41 HOH HOH A . B 2 HOH 30 370 42 HOH HOH A . B 2 HOH 31 371 43 HOH HOH A . B 2 HOH 32 372 44 HOH HOH A . B 2 HOH 33 373 47 HOH HOH A . B 2 HOH 34 374 48 HOH HOH A . B 2 HOH 35 375 49 HOH HOH A . B 2 HOH 36 376 50 HOH HOH A . B 2 HOH 37 377 51 HOH HOH A . B 2 HOH 38 378 52 HOH HOH A . B 2 HOH 39 379 53 HOH HOH A . B 2 HOH 40 380 59 HOH HOH A . B 2 HOH 41 381 60 HOH HOH A . B 2 HOH 42 382 62 HOH HOH A . B 2 HOH 43 383 70 HOH HOH A . B 2 HOH 44 384 73 HOH HOH A . B 2 HOH 45 385 87 HOH HOH A . B 2 HOH 46 386 88 HOH HOH A . B 2 HOH 47 387 89 HOH HOH A . B 2 HOH 48 388 90 HOH HOH A . B 2 HOH 49 389 93 HOH HOH A . B 2 HOH 50 390 94 HOH HOH A . B 2 HOH 51 391 95 HOH HOH A . B 2 HOH 52 392 96 HOH HOH A . B 2 HOH 53 393 100 HOH HOH A . B 2 HOH 54 394 105 HOH HOH A . B 2 HOH 55 395 106 HOH HOH A . B 2 HOH 56 396 107 HOH HOH A . B 2 HOH 57 397 110 HOH HOH A . B 2 HOH 58 398 117 HOH HOH A . B 2 HOH 59 399 120 HOH HOH A . B 2 HOH 60 400 127 HOH HOH A . B 2 HOH 61 401 130 HOH HOH A . B 2 HOH 62 402 131 HOH HOH A . B 2 HOH 63 403 134 HOH HOH A . B 2 HOH 64 404 136 HOH HOH A . B 2 HOH 65 405 139 HOH HOH A . B 2 HOH 66 406 144 HOH HOH A . B 2 HOH 67 407 152 HOH HOH A . B 2 HOH 68 408 157 HOH HOH A . B 2 HOH 69 409 160 HOH HOH A . B 2 HOH 70 410 161 HOH HOH A . B 2 HOH 71 411 178 HOH HOH A . B 2 HOH 72 412 181 HOH HOH A . B 2 HOH 73 413 185 HOH HOH A . B 2 HOH 74 414 187 HOH HOH A . B 2 HOH 75 415 239 HOH HOH A . B 2 HOH 76 416 241 HOH HOH A . B 2 HOH 77 417 242 HOH HOH A . B 2 HOH 78 418 243 HOH HOH A . B 2 HOH 79 419 245 HOH HOH A . B 2 HOH 80 420 250 HOH HOH A . B 2 HOH 81 421 252 HOH HOH A . B 2 HOH 82 422 253 HOH HOH A . B 2 HOH 83 423 256 HOH HOH A . B 2 HOH 84 424 270 HOH HOH A . B 2 HOH 85 425 271 HOH HOH A . B 2 HOH 86 426 274 HOH HOH A . B 2 HOH 87 427 279 HOH HOH A . B 2 HOH 88 428 282 HOH HOH A . B 2 HOH 89 429 283 HOH HOH A . #