HEADER PROTEIN SYNTHESIS INHIBITOR(TOXIN) 04-MAR-94 1MOM TITLE CRYSTAL STRUCTURE OF MOMORDIN, A TYPE I RIBOSOME INACTIVATING PROTEIN TITLE 2 FROM THE SEEDS OF MOMORDICA CHARANTIA COMPND MOL_ID: 1; COMPND 2 MOLECULE: MOMORDIN; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.2.22; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MOMORDICA CHARANTIA; SOURCE 3 ORGANISM_COMMON: BITTER GOURD, BALSAM PEAR; SOURCE 4 ORGANISM_TAXID: 3673 KEYWDS PROTEIN SYNTHESIS INHIBITOR(TOXIN) EXPDTA X-RAY DIFFRACTION AUTHOR J.HUSAIN,I.J.TICKLE,S.P.WOOD REVDAT 7 13-NOV-24 1MOM 1 HETSYN REVDAT 6 29-JUL-20 1MOM 1 COMPND REMARK SEQADV HETNAM REVDAT 6 2 1 LINK SITE ATOM REVDAT 5 29-NOV-17 1MOM 1 HELIX REVDAT 4 13-JUL-11 1MOM 1 VERSN REVDAT 3 25-AUG-09 1MOM 1 SOURCE REVDAT 2 24-FEB-09 1MOM 1 VERSN REVDAT 1 31-MAY-94 1MOM 0 JRNL AUTH J.HUSAIN,I.J.TICKLE,S.P.WOOD JRNL TITL CRYSTAL STRUCTURE OF MOMORDIN, A TYPE I RIBOSOME JRNL TITL 2 INACTIVATING PROTEIN FROM THE SEEDS OF MOMORDICA CHARANTIA. JRNL REF FEBS LETT. V. 342 154 1994 JRNL REFN ISSN 0014-5793 JRNL PMID 8143869 JRNL DOI 10.1016/0014-5793(94)80491-5 REMARK 2 REMARK 2 RESOLUTION. 2.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROLSQ REMARK 3 AUTHORS : KONNERT,HENDRICKSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 13591 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1933 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 197 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 0.109 ; 0.138 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 0.134 ; 0.151 REMARK 3 SIDE-CHAIN BOND (A**2) : 0.146 ; 0.159 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 0.175 ; 0.178 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1MOM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000175102. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 65.58500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 37.86552 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 13.58333 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 65.58500 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 37.86552 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 13.58333 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 65.58500 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 37.86552 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 13.58333 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 75.73103 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 27.16667 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 75.73103 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 27.16667 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 75.73103 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 27.16667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA A 175 O HOH A 508 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 473 O HOH A 513 1556 2.02 REMARK 500 OD1 ASP A 56 O HOH A 488 2765 2.15 REMARK 500 O HOH A 557 O HOH A 587 2765 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 5 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 5 NE - CZ - NH2 ANGL. DEV. = -5.0 DEGREES REMARK 500 ASP A 10 CB - CA - C ANGL. DEV. = 13.6 DEGREES REMARK 500 ARG A 12 CD - NE - CZ ANGL. DEV. = 16.7 DEGREES REMARK 500 ARG A 12 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 22 NE - CZ - NH1 ANGL. DEV. = -5.2 DEGREES REMARK 500 ARG A 22 NE - CZ - NH2 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG A 28 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 TYR A 47 CB - CG - CD2 ANGL. DEV. = -5.0 DEGREES REMARK 500 TYR A 47 CB - CG - CD1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ALA A 63 N - CA - CB ANGL. DEV. = 8.6 DEGREES REMARK 500 LEU A 64 N - CA - CB ANGL. DEV. = -12.8 DEGREES REMARK 500 LEU A 64 CD1 - CG - CD2 ANGL. DEV. = 18.4 DEGREES REMARK 500 LEU A 64 CB - CG - CD2 ANGL. DEV. = -13.8 DEGREES REMARK 500 ASP A 65 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 TYR A 70 CB - CG - CD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 MET A 72 CG - SD - CE ANGL. DEV. = 13.9 DEGREES REMARK 500 TYR A 74 CB - CG - CD1 ANGL. DEV. = -4.8 DEGREES REMARK 500 GLU A 85 CB - CA - C ANGL. DEV. = -13.0 DEGREES REMARK 500 GLU A 85 CA - CB - CG ANGL. DEV. = 13.7 DEGREES REMARK 500 LEU A 90 CB - CA - C ANGL. DEV. = 13.5 DEGREES REMARK 500 ARG A 113 CD - NE - CZ ANGL. DEV. = 42.4 DEGREES REMARK 500 ARG A 113 NE - CZ - NH1 ANGL. DEV. = 8.3 DEGREES REMARK 500 ARG A 113 NE - CZ - NH2 ANGL. DEV. = -4.9 DEGREES REMARK 500 ARG A 122 CD - NE - CZ ANGL. DEV. = 24.5 DEGREES REMARK 500 ASP A 143 OD1 - CG - OD2 ANGL. DEV. = -11.5 DEGREES REMARK 500 ASP A 143 CB - CG - OD2 ANGL. DEV. = 7.0 DEGREES REMARK 500 LEU A 154 CA - CB - CG ANGL. DEV. = 18.7 DEGREES REMARK 500 ARG A 163 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 174 NE - CZ - NH2 ANGL. DEV. = 7.0 DEGREES REMARK 500 ARG A 177 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 177 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 PHE A 209 CA - CB - CG ANGL. DEV. = 18.8 DEGREES REMARK 500 ARG A 210 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 LYS A 219 C - N - CA ANGL. DEV. = 15.6 DEGREES REMARK 500 ARG A 222 CD - NE - CZ ANGL. DEV. = 9.0 DEGREES REMARK 500 THR A 226 N - CA - CB ANGL. DEV. = -14.1 DEGREES REMARK 500 VAL A 228 N - CA - CB ANGL. DEV. = -13.9 DEGREES REMARK 500 ASN A 236 CB - CG - OD1 ANGL. DEV. = -12.9 DEGREES REMARK 500 LEU A 241 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 ARG A 244 NE - CZ - NH1 ANGL. DEV. = 7.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 33 -0.18 84.69 REMARK 500 ASN A 68 -3.07 -143.83 REMARK 500 ASP A 77 -102.18 62.90 REMARK 500 PRO A 106 31.93 -75.92 REMARK 500 ASP A 143 106.63 -164.83 REMARK 500 THR A 158 -81.15 -119.38 REMARK 500 ASP A 217 128.40 7.68 REMARK 500 ASN A 218 126.71 -21.51 REMARK 500 LYS A 219 2.57 109.64 REMARK 500 ASN A 236 -87.11 -51.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AST REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: ACTIVE SITE IN MOMORDIN REMARK 999 REMARK 999 SEQUENCE REMARK 999 SEQUENCE ADVISORY NOTICE REMARK 999 DIFFERENCE BETWEEN SWISS-PROT AND PDB SEQUENCE. REMARK 999 REMARK 999 SWISS-PROT ENTRY NAME: RIP1_MOMCH REMARK 999 REMARK 999 SWISS-PROT RESIDUE PDB SEQRES REMARK 999 REMARK 999 NAME NUMBER NAME CHAIN SEQ/INSERT CODE REMARK 999 VAL 87 LEU 64 DBREF 1MOM A 1 246 UNP P16094 RIP1_MOMCH 24 269 SEQADV 1MOM LEU A 64 UNP P16094 VAL 87 CONFLICT SEQRES 1 A 246 ASP VAL SER PHE ARG LEU SER GLY ALA ASP PRO ARG SER SEQRES 2 A 246 TYR GLY MET PHE ILE LYS ASP LEU ARG ASN ALA LEU PRO SEQRES 3 A 246 PHE ARG GLU LYS VAL TYR ASN ILE PRO LEU LEU LEU PRO SEQRES 4 A 246 SER VAL SER GLY ALA GLY ARG TYR LEU LEU MET HIS LEU SEQRES 5 A 246 PHE ASN TYR ASP GLY LYS THR ILE THR VAL ALA LEU ASP SEQRES 6 A 246 VAL THR ASN VAL TYR ILE MET GLY TYR LEU ALA ASP THR SEQRES 7 A 246 THR SER TYR PHE PHE ASN GLU PRO ALA ALA GLU LEU ALA SEQRES 8 A 246 SER GLN TYR VAL PHE ARG ASP ALA ARG ARG LYS ILE THR SEQRES 9 A 246 LEU PRO TYR SER GLY ASN TYR GLU ARG LEU GLN ILE ALA SEQRES 10 A 246 ALA GLY LYS PRO ARG GLU LYS ILE PRO ILE GLY LEU PRO SEQRES 11 A 246 ALA LEU ASP SER ALA ILE SER THR LEU LEU HIS TYR ASP SEQRES 12 A 246 SER THR ALA ALA ALA GLY ALA LEU LEU VAL LEU ILE GLN SEQRES 13 A 246 THR THR ALA GLU ALA ALA ARG PHE LYS TYR ILE GLU GLN SEQRES 14 A 246 GLN ILE GLN GLU ARG ALA TYR ARG ASP GLU VAL PRO SER SEQRES 15 A 246 LEU ALA THR ILE SER LEU GLU ASN SER TRP SER GLY LEU SEQRES 16 A 246 SER LYS GLN ILE GLN LEU ALA GLN GLY ASN ASN GLY ILE SEQRES 17 A 246 PHE ARG THR PRO ILE VAL LEU VAL ASP ASN LYS GLY ASN SEQRES 18 A 246 ARG VAL GLN ILE THR ASN VAL THR SER LYS VAL VAL THR SEQRES 19 A 246 SER ASN ILE GLN LEU LEU LEU ASN THR ARG ASN ILE MODRES 1MOM ASN A 227 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 3 HOH *197(H2 O) HELIX 1 A PRO A 11 ASN A 23 1 13 HELIX 2 A' ALA A 44 ARG A 46 5 3 HELIX 3 B PRO A 86 SER A 92 1 7 HELIX 4 C TYR A 111 ALA A 118 1 8 HELIX 5 B' ARG A 122 LYS A 124 5 3 HELIX 6 D LEU A 129 LEU A 139 1 11 HELIX 7 E SER A 144 ILE A 155 1 12 HELIX 8 C' THR A 158 ARG A 163 1 6 HELIX 9 F LYS A 165 GLU A 173 1 9 HELIX 10 G LEU A 183 SER A 191 1 9 HELIX 11 H TRP A 192 LEU A 201 1 10 HELIX 12 D' LYS A 231 ASN A 236 3 6 HELIX 13 E' THR A 243 ILE A 246 5 4 SHEET 1 S1 6 VAL A 2 LEU A 6 0 SHEET 2 S1 6 ARG A 46 ASN A 54 1 O LEU A 49 N VAL A 2 SHEET 3 S1 6 LYS A 58 VAL A 66 -1 O LYS A 58 N ASN A 54 SHEET 4 S1 6 TYR A 70 ALA A 76 -1 O TYR A 70 N ASP A 65 SHEET 5 S1 6 THR A 78 PHE A 83 -1 O THR A 79 N ALA A 76 SHEET 6 S1 6 ARG A 101 LEU A 105 1 O ARG A 101 N SER A 80 SHEET 1 S2 2 PRO A 26 VAL A 31 0 SHEET 2 S2 2 ILE A 34 LEU A 38 -1 O ILE A 34 N VAL A 31 SHEET 1 S3 2 GLY A 207 LEU A 215 0 SHEET 2 S3 2 VAL A 223 VAL A 228 -1 O VAL A 223 N LEU A 215 LINK ND2 ASN A 227 C1 NAG B 1 1555 1555 1.46 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.48 SITE 1 AST 5 TYR A 70 TYR A 111 GLU A 160 ARG A 163 SITE 2 AST 5 TRP A 192 CRYST1 131.170 131.170 40.750 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007624 0.004402 0.000000 0.00000 SCALE2 0.000000 0.008803 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024540 0.00000