data_1MQ2 # _entry.id 1MQ2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.393 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1MQ2 pdb_00001mq2 10.2210/pdb1mq2/pdb NDB PD0343 ? ? RCSB RCSB017087 ? ? WWPDB D_1000017087 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-01-28 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 5 'Structure model' 2 0 2024-05-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Atomic model' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Derived calculations' 10 5 'Structure model' 'Non-polymer description' 11 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site 8 5 'Structure model' atom_site 9 5 'Structure model' chem_comp 10 5 'Structure model' chem_comp_atom 11 5 'Structure model' chem_comp_bond 12 5 'Structure model' pdbx_entity_nonpoly 13 5 'Structure model' pdbx_nonpoly_scheme 14 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 19 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 27 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 31 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 32 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 33 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 34 5 'Structure model' '_atom_site.B_iso_or_equiv' 35 5 'Structure model' '_atom_site.Cartn_x' 36 5 'Structure model' '_atom_site.Cartn_y' 37 5 'Structure model' '_atom_site.Cartn_z' 38 5 'Structure model' '_atom_site.auth_atom_id' 39 5 'Structure model' '_atom_site.auth_comp_id' 40 5 'Structure model' '_atom_site.label_atom_id' 41 5 'Structure model' '_atom_site.label_comp_id' 42 5 'Structure model' '_atom_site.type_symbol' 43 5 'Structure model' '_chem_comp.formula' 44 5 'Structure model' '_chem_comp.formula_weight' 45 5 'Structure model' '_chem_comp.id' 46 5 'Structure model' '_chem_comp.mon_nstd_flag' 47 5 'Structure model' '_chem_comp.name' 48 5 'Structure model' '_chem_comp.type' 49 5 'Structure model' '_pdbx_entity_nonpoly.comp_id' 50 5 'Structure model' '_pdbx_nonpoly_scheme.mon_id' 51 5 'Structure model' '_pdbx_nonpoly_scheme.pdb_mon_id' 52 5 'Structure model' '_struct_site.details' 53 5 'Structure model' '_struct_site.pdbx_auth_comp_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1MQ2 _pdbx_database_status.recvd_initial_deposition_date 2002-09-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1BPX '1BPX IS Human DNA Polymerase Beta Complexed With Gapped DNA' unspecified PDB 1BPY '1BPY IS Human DNA Polymerase Beta Complexed With Gapped DNA and Ddctp' unspecified PDB 1MQ3 '1MQ3 IS Human DNA Polymerase Beta Complexed With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine Template Paired with dCTP' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Krahn, J.M.' 1 'Beard, W.A.' 2 'Miller, H.' 3 'Grollman, A.P.' 4 'Wilson, S.H.' 5 # _citation.id primary _citation.title ;Structure of DNA Polymerase beta with the Mutagenic DNA Lesion 8-oxodeoxyguanine Reveals Structural Insights into its Coding Potential ; _citation.journal_abbrev Structure _citation.journal_volume 11 _citation.page_first 121 _citation.page_last 127 _citation.year 2003 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12517346 _citation.pdbx_database_id_DOI '10.1016/S0969-2126(02)00930-9' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Krahn, J.M.' 1 ? primary 'Beard, W.A.' 2 ? primary 'Miller, H.' 3 ? primary 'Grollman, A.P.' 4 ? primary 'Wilson, S.H.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*CP*GP*AP*CP*(8OG)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'" 4860.144 1 ? ? ? ? 2 polymer syn "5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(2DA))-3'" 3069.029 1 ? ? ? ? 3 polymer syn "5'-D(P*GP*TP*CP*GP*G)-3'" 1536.035 1 ? ? ? ? 4 polymer man 'DNA POLYMERASE BETA' 38241.672 1 2.7.7.7 ? ? ? 5 non-polymer syn "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" 331.222 1 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 7 water nat water 18.015 4 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DC)(DC)(DG)(DA)(DC)(8OG)(DT)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC)' CCGACGTCGCATCAGC T ? 2 polydeoxyribonucleotide no yes '(DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(2DA)' GCTGATGCGA P ? 3 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DG)' GTCGG D ? 4 'polypeptide(L)' no no ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" D5M 6 'SODIUM ION' NA 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DG n 1 4 DA n 1 5 DC n 1 6 8OG n 1 7 DT n 1 8 DC n 1 9 DG n 1 10 DC n 1 11 DA n 1 12 DT n 1 13 DC n 1 14 DA n 1 15 DG n 1 16 DC n 2 1 DG n 2 2 DC n 2 3 DT n 2 4 DG n 2 5 DA n 2 6 DT n 2 7 DG n 2 8 DC n 2 9 DG n 2 10 2DA n 3 1 DG n 3 2 DT n 3 3 DC n 3 4 DG n 3 5 DG n 4 1 MET n 4 2 SER n 4 3 LYS n 4 4 ARG n 4 5 LYS n 4 6 ALA n 4 7 PRO n 4 8 GLN n 4 9 GLU n 4 10 THR n 4 11 LEU n 4 12 ASN n 4 13 GLY n 4 14 GLY n 4 15 ILE n 4 16 THR n 4 17 ASP n 4 18 MET n 4 19 LEU n 4 20 THR n 4 21 GLU n 4 22 LEU n 4 23 ALA n 4 24 ASN n 4 25 PHE n 4 26 GLU n 4 27 LYS n 4 28 ASN n 4 29 VAL n 4 30 SER n 4 31 GLN n 4 32 ALA n 4 33 ILE n 4 34 HIS n 4 35 LYS n 4 36 TYR n 4 37 ASN n 4 38 ALA n 4 39 TYR n 4 40 ARG n 4 41 LYS n 4 42 ALA n 4 43 ALA n 4 44 SER n 4 45 VAL n 4 46 ILE n 4 47 ALA n 4 48 LYS n 4 49 TYR n 4 50 PRO n 4 51 HIS n 4 52 LYS n 4 53 ILE n 4 54 LYS n 4 55 SER n 4 56 GLY n 4 57 ALA n 4 58 GLU n 4 59 ALA n 4 60 LYS n 4 61 LYS n 4 62 LEU n 4 63 PRO n 4 64 GLY n 4 65 VAL n 4 66 GLY n 4 67 THR n 4 68 LYS n 4 69 ILE n 4 70 ALA n 4 71 GLU n 4 72 LYS n 4 73 ILE n 4 74 ASP n 4 75 GLU n 4 76 PHE n 4 77 LEU n 4 78 ALA n 4 79 THR n 4 80 GLY n 4 81 LYS n 4 82 LEU n 4 83 ARG n 4 84 LYS n 4 85 LEU n 4 86 GLU n 4 87 LYS n 4 88 ILE n 4 89 ARG n 4 90 GLN n 4 91 ASP n 4 92 ASP n 4 93 THR n 4 94 SER n 4 95 SER n 4 96 SER n 4 97 ILE n 4 98 ASN n 4 99 PHE n 4 100 LEU n 4 101 THR n 4 102 ARG n 4 103 VAL n 4 104 SER n 4 105 GLY n 4 106 ILE n 4 107 GLY n 4 108 PRO n 4 109 SER n 4 110 ALA n 4 111 ALA n 4 112 ARG n 4 113 LYS n 4 114 PHE n 4 115 VAL n 4 116 ASP n 4 117 GLU n 4 118 GLY n 4 119 ILE n 4 120 LYS n 4 121 THR n 4 122 LEU n 4 123 GLU n 4 124 ASP n 4 125 LEU n 4 126 ARG n 4 127 LYS n 4 128 ASN n 4 129 GLU n 4 130 ASP n 4 131 LYS n 4 132 LEU n 4 133 ASN n 4 134 HIS n 4 135 HIS n 4 136 GLN n 4 137 ARG n 4 138 ILE n 4 139 GLY n 4 140 LEU n 4 141 LYS n 4 142 TYR n 4 143 PHE n 4 144 GLY n 4 145 ASP n 4 146 PHE n 4 147 GLU n 4 148 LYS n 4 149 ARG n 4 150 ILE n 4 151 PRO n 4 152 ARG n 4 153 GLU n 4 154 GLU n 4 155 MET n 4 156 LEU n 4 157 GLN n 4 158 MET n 4 159 GLN n 4 160 ASP n 4 161 ILE n 4 162 VAL n 4 163 LEU n 4 164 ASN n 4 165 GLU n 4 166 VAL n 4 167 LYS n 4 168 LYS n 4 169 VAL n 4 170 ASP n 4 171 SER n 4 172 GLU n 4 173 TYR n 4 174 ILE n 4 175 ALA n 4 176 THR n 4 177 VAL n 4 178 CYS n 4 179 GLY n 4 180 SER n 4 181 PHE n 4 182 ARG n 4 183 ARG n 4 184 GLY n 4 185 ALA n 4 186 GLU n 4 187 SER n 4 188 SER n 4 189 GLY n 4 190 ASP n 4 191 MET n 4 192 ASP n 4 193 VAL n 4 194 LEU n 4 195 LEU n 4 196 THR n 4 197 HIS n 4 198 PRO n 4 199 SER n 4 200 PHE n 4 201 THR n 4 202 SER n 4 203 GLU n 4 204 SER n 4 205 THR n 4 206 LYS n 4 207 GLN n 4 208 PRO n 4 209 LYS n 4 210 LEU n 4 211 LEU n 4 212 HIS n 4 213 GLN n 4 214 VAL n 4 215 VAL n 4 216 GLU n 4 217 GLN n 4 218 LEU n 4 219 GLN n 4 220 LYS n 4 221 VAL n 4 222 HIS n 4 223 PHE n 4 224 ILE n 4 225 THR n 4 226 ASP n 4 227 THR n 4 228 LEU n 4 229 SER n 4 230 LYS n 4 231 GLY n 4 232 GLU n 4 233 THR n 4 234 LYS n 4 235 PHE n 4 236 MET n 4 237 GLY n 4 238 VAL n 4 239 CYS n 4 240 GLN n 4 241 LEU n 4 242 PRO n 4 243 SER n 4 244 LYS n 4 245 ASN n 4 246 ASP n 4 247 GLU n 4 248 LYS n 4 249 GLU n 4 250 TYR n 4 251 PRO n 4 252 HIS n 4 253 ARG n 4 254 ARG n 4 255 ILE n 4 256 ASP n 4 257 ILE n 4 258 ARG n 4 259 LEU n 4 260 ILE n 4 261 PRO n 4 262 LYS n 4 263 ASP n 4 264 GLN n 4 265 TYR n 4 266 TYR n 4 267 CYS n 4 268 GLY n 4 269 VAL n 4 270 LEU n 4 271 TYR n 4 272 PHE n 4 273 THR n 4 274 GLY n 4 275 SER n 4 276 ASP n 4 277 ILE n 4 278 PHE n 4 279 ASN n 4 280 LYS n 4 281 ASN n 4 282 MET n 4 283 ARG n 4 284 ALA n 4 285 HIS n 4 286 ALA n 4 287 LEU n 4 288 GLU n 4 289 LYS n 4 290 GLY n 4 291 PHE n 4 292 THR n 4 293 ILE n 4 294 ASN n 4 295 GLU n 4 296 TYR n 4 297 THR n 4 298 ILE n 4 299 ARG n 4 300 PRO n 4 301 LEU n 4 302 GLY n 4 303 VAL n 4 304 THR n 4 305 GLY n 4 306 VAL n 4 307 ALA n 4 308 GLY n 4 309 GLU n 4 310 PRO n 4 311 LEU n 4 312 PRO n 4 313 VAL n 4 314 ASP n 4 315 SER n 4 316 GLU n 4 317 LYS n 4 318 ASP n 4 319 ILE n 4 320 PHE n 4 321 ASP n 4 322 TYR n 4 323 ILE n 4 324 GLN n 4 325 TRP n 4 326 LYS n 4 327 TYR n 4 328 ARG n 4 329 GLU n 4 330 PRO n 4 331 LYS n 4 332 ASP n 4 333 ARG n 4 334 SER n 4 335 GLU n # _entity_src_gen.entity_id 4 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2DA 'DNA linking' n "2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O5 P' 315.222 8OG 'DNA linking' n "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" "8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 'C10 H14 N5 O8 P' 363.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 D5M non-polymer . "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C T . n A 1 2 DC 2 2 2 DC C T . n A 1 3 DG 3 3 3 DG G T . n A 1 4 DA 4 4 4 DA A T . n A 1 5 DC 5 5 5 DC C T . n A 1 6 8OG 6 6 6 8OG 8OG T . n A 1 7 DT 7 7 7 DT T T . n A 1 8 DC 8 8 8 DC C T . n A 1 9 DG 9 9 9 DG G T . n A 1 10 DC 10 10 10 DC C T . n A 1 11 DA 11 11 11 DA A T . n A 1 12 DT 12 12 12 DT T T . n A 1 13 DC 13 13 13 DC C T . n A 1 14 DA 14 14 14 DA A T . n A 1 15 DG 15 15 15 DG G T . n A 1 16 DC 16 16 16 DC C T . n B 2 1 DG 1 1 1 DG G P . n B 2 2 DC 2 2 2 DC C P . n B 2 3 DT 3 3 3 DT T P . n B 2 4 DG 4 4 4 DG G P . n B 2 5 DA 5 5 5 DA A P . n B 2 6 DT 6 6 6 DT T P . n B 2 7 DG 7 7 7 DG G P . n B 2 8 DC 8 8 8 DC C P . n B 2 9 DG 9 9 9 DG G P . n B 2 10 2DA 10 10 10 2DA 2DA P . n C 3 1 DG 1 1 1 DG G D . n C 3 2 DT 2 2 2 DT T D . n C 3 3 DC 3 3 3 DC C D . n C 3 4 DG 4 4 4 DG G D . n C 3 5 DG 5 5 5 DG G D . n D 4 1 MET 1 1 ? ? ? A . n D 4 2 SER 2 2 ? ? ? A . n D 4 3 LYS 3 3 ? ? ? A . n D 4 4 ARG 4 4 ? ? ? A . n D 4 5 LYS 5 5 ? ? ? A . n D 4 6 ALA 6 6 ? ? ? A . n D 4 7 PRO 7 7 ? ? ? A . n D 4 8 GLN 8 8 ? ? ? A . n D 4 9 GLU 9 9 ? ? ? A . n D 4 10 THR 10 10 10 THR THR A . n D 4 11 LEU 11 11 11 LEU LEU A . n D 4 12 ASN 12 12 12 ASN ASN A . n D 4 13 GLY 13 13 13 GLY GLY A . n D 4 14 GLY 14 14 14 GLY GLY A . n D 4 15 ILE 15 15 15 ILE ILE A . n D 4 16 THR 16 16 16 THR THR A . n D 4 17 ASP 17 17 17 ASP ASP A . n D 4 18 MET 18 18 18 MET MET A . n D 4 19 LEU 19 19 19 LEU LEU A . n D 4 20 THR 20 20 20 THR THR A . n D 4 21 GLU 21 21 21 GLU GLU A . n D 4 22 LEU 22 22 22 LEU LEU A . n D 4 23 ALA 23 23 23 ALA ALA A . n D 4 24 ASN 24 24 24 ASN ASN A . n D 4 25 PHE 25 25 25 PHE PHE A . n D 4 26 GLU 26 26 26 GLU GLU A . n D 4 27 LYS 27 27 27 LYS LYS A . n D 4 28 ASN 28 28 28 ASN ASN A . n D 4 29 VAL 29 29 29 VAL VAL A . n D 4 30 SER 30 30 30 SER SER A . n D 4 31 GLN 31 31 31 GLN GLN A . n D 4 32 ALA 32 32 32 ALA ALA A . n D 4 33 ILE 33 33 33 ILE ILE A . n D 4 34 HIS 34 34 34 HIS HIS A . n D 4 35 LYS 35 35 35 LYS LYS A . n D 4 36 TYR 36 36 36 TYR TYR A . n D 4 37 ASN 37 37 37 ASN ASN A . n D 4 38 ALA 38 38 38 ALA ALA A . n D 4 39 TYR 39 39 39 TYR TYR A . n D 4 40 ARG 40 40 40 ARG ARG A . n D 4 41 LYS 41 41 41 LYS LYS A . n D 4 42 ALA 42 42 42 ALA ALA A . n D 4 43 ALA 43 43 43 ALA ALA A . n D 4 44 SER 44 44 44 SER SER A . n D 4 45 VAL 45 45 45 VAL VAL A . n D 4 46 ILE 46 46 46 ILE ILE A . n D 4 47 ALA 47 47 47 ALA ALA A . n D 4 48 LYS 48 48 48 LYS LYS A . n D 4 49 TYR 49 49 49 TYR TYR A . n D 4 50 PRO 50 50 50 PRO PRO A . n D 4 51 HIS 51 51 51 HIS HIS A . n D 4 52 LYS 52 52 52 LYS LYS A . n D 4 53 ILE 53 53 53 ILE ILE A . n D 4 54 LYS 54 54 54 LYS LYS A . n D 4 55 SER 55 55 55 SER SER A . n D 4 56 GLY 56 56 56 GLY GLY A . n D 4 57 ALA 57 57 57 ALA ALA A . n D 4 58 GLU 58 58 58 GLU GLU A . n D 4 59 ALA 59 59 59 ALA ALA A . n D 4 60 LYS 60 60 60 LYS LYS A . n D 4 61 LYS 61 61 61 LYS LYS A . n D 4 62 LEU 62 62 62 LEU LEU A . n D 4 63 PRO 63 63 63 PRO PRO A . n D 4 64 GLY 64 64 64 GLY GLY A . n D 4 65 VAL 65 65 65 VAL VAL A . n D 4 66 GLY 66 66 66 GLY GLY A . n D 4 67 THR 67 67 67 THR THR A . n D 4 68 LYS 68 68 68 LYS LYS A . n D 4 69 ILE 69 69 69 ILE ILE A . n D 4 70 ALA 70 70 70 ALA ALA A . n D 4 71 GLU 71 71 71 GLU GLU A . n D 4 72 LYS 72 72 72 LYS LYS A . n D 4 73 ILE 73 73 73 ILE ILE A . n D 4 74 ASP 74 74 74 ASP ASP A . n D 4 75 GLU 75 75 75 GLU GLU A . n D 4 76 PHE 76 76 76 PHE PHE A . n D 4 77 LEU 77 77 77 LEU LEU A . n D 4 78 ALA 78 78 78 ALA ALA A . n D 4 79 THR 79 79 79 THR THR A . n D 4 80 GLY 80 80 80 GLY GLY A . n D 4 81 LYS 81 81 81 LYS LYS A . n D 4 82 LEU 82 82 82 LEU LEU A . n D 4 83 ARG 83 83 83 ARG ARG A . n D 4 84 LYS 84 84 84 LYS LYS A . n D 4 85 LEU 85 85 85 LEU LEU A . n D 4 86 GLU 86 86 86 GLU GLU A . n D 4 87 LYS 87 87 87 LYS LYS A . n D 4 88 ILE 88 88 88 ILE ILE A . n D 4 89 ARG 89 89 89 ARG ARG A . n D 4 90 GLN 90 90 90 GLN GLN A . n D 4 91 ASP 91 91 91 ASP ASP A . n D 4 92 ASP 92 92 92 ASP ASP A . n D 4 93 THR 93 93 93 THR THR A . n D 4 94 SER 94 94 94 SER SER A . n D 4 95 SER 95 95 95 SER SER A . n D 4 96 SER 96 96 96 SER SER A . n D 4 97 ILE 97 97 97 ILE ILE A . n D 4 98 ASN 98 98 98 ASN ASN A . n D 4 99 PHE 99 99 99 PHE PHE A . n D 4 100 LEU 100 100 100 LEU LEU A . n D 4 101 THR 101 101 101 THR THR A . n D 4 102 ARG 102 102 102 ARG ARG A . n D 4 103 VAL 103 103 103 VAL VAL A . n D 4 104 SER 104 104 104 SER SER A . n D 4 105 GLY 105 105 105 GLY GLY A . n D 4 106 ILE 106 106 106 ILE ILE A . n D 4 107 GLY 107 107 107 GLY GLY A . n D 4 108 PRO 108 108 108 PRO PRO A . n D 4 109 SER 109 109 109 SER SER A . n D 4 110 ALA 110 110 110 ALA ALA A . n D 4 111 ALA 111 111 111 ALA ALA A . n D 4 112 ARG 112 112 112 ARG ARG A . n D 4 113 LYS 113 113 113 LYS LYS A . n D 4 114 PHE 114 114 114 PHE PHE A . n D 4 115 VAL 115 115 115 VAL VAL A . n D 4 116 ASP 116 116 116 ASP ASP A . n D 4 117 GLU 117 117 117 GLU GLU A . n D 4 118 GLY 118 118 118 GLY GLY A . n D 4 119 ILE 119 119 119 ILE ILE A . n D 4 120 LYS 120 120 120 LYS LYS A . n D 4 121 THR 121 121 121 THR THR A . n D 4 122 LEU 122 122 122 LEU LEU A . n D 4 123 GLU 123 123 123 GLU GLU A . n D 4 124 ASP 124 124 124 ASP ASP A . n D 4 125 LEU 125 125 125 LEU LEU A . n D 4 126 ARG 126 126 126 ARG ARG A . n D 4 127 LYS 127 127 127 LYS LYS A . n D 4 128 ASN 128 128 128 ASN ASN A . n D 4 129 GLU 129 129 129 GLU GLU A . n D 4 130 ASP 130 130 130 ASP ASP A . n D 4 131 LYS 131 131 131 LYS LYS A . n D 4 132 LEU 132 132 132 LEU LEU A . n D 4 133 ASN 133 133 133 ASN ASN A . n D 4 134 HIS 134 134 134 HIS HIS A . n D 4 135 HIS 135 135 135 HIS HIS A . n D 4 136 GLN 136 136 136 GLN GLN A . n D 4 137 ARG 137 137 137 ARG ARG A . n D 4 138 ILE 138 138 138 ILE ILE A . n D 4 139 GLY 139 139 139 GLY GLY A . n D 4 140 LEU 140 140 140 LEU LEU A . n D 4 141 LYS 141 141 141 LYS LYS A . n D 4 142 TYR 142 142 142 TYR TYR A . n D 4 143 PHE 143 143 143 PHE PHE A . n D 4 144 GLY 144 144 144 GLY GLY A . n D 4 145 ASP 145 145 145 ASP ASP A . n D 4 146 PHE 146 146 146 PHE PHE A . n D 4 147 GLU 147 147 147 GLU GLU A . n D 4 148 LYS 148 148 148 LYS LYS A . n D 4 149 ARG 149 149 149 ARG ARG A . n D 4 150 ILE 150 150 150 ILE ILE A . n D 4 151 PRO 151 151 151 PRO PRO A . n D 4 152 ARG 152 152 152 ARG ARG A . n D 4 153 GLU 153 153 153 GLU GLU A . n D 4 154 GLU 154 154 154 GLU GLU A . n D 4 155 MET 155 155 155 MET MET A . n D 4 156 LEU 156 156 156 LEU LEU A . n D 4 157 GLN 157 157 157 GLN GLN A . n D 4 158 MET 158 158 158 MET MET A . n D 4 159 GLN 159 159 159 GLN GLN A . n D 4 160 ASP 160 160 160 ASP ASP A . n D 4 161 ILE 161 161 161 ILE ILE A . n D 4 162 VAL 162 162 162 VAL VAL A . n D 4 163 LEU 163 163 163 LEU LEU A . n D 4 164 ASN 164 164 164 ASN ASN A . n D 4 165 GLU 165 165 165 GLU GLU A . n D 4 166 VAL 166 166 166 VAL VAL A . n D 4 167 LYS 167 167 167 LYS LYS A . n D 4 168 LYS 168 168 168 LYS LYS A . n D 4 169 VAL 169 169 169 VAL VAL A . n D 4 170 ASP 170 170 170 ASP ASP A . n D 4 171 SER 171 171 171 SER SER A . n D 4 172 GLU 172 172 172 GLU GLU A . n D 4 173 TYR 173 173 173 TYR TYR A . n D 4 174 ILE 174 174 174 ILE ILE A . n D 4 175 ALA 175 175 175 ALA ALA A . n D 4 176 THR 176 176 176 THR THR A . n D 4 177 VAL 177 177 177 VAL VAL A . n D 4 178 CYS 178 178 178 CYS CYS A . n D 4 179 GLY 179 179 179 GLY GLY A . n D 4 180 SER 180 180 180 SER SER A . n D 4 181 PHE 181 181 181 PHE PHE A . n D 4 182 ARG 182 182 182 ARG ARG A . n D 4 183 ARG 183 183 183 ARG ARG A . n D 4 184 GLY 184 184 184 GLY GLY A . n D 4 185 ALA 185 185 185 ALA ALA A . n D 4 186 GLU 186 186 186 GLU GLU A . n D 4 187 SER 187 187 187 SER SER A . n D 4 188 SER 188 188 188 SER SER A . n D 4 189 GLY 189 189 189 GLY GLY A . n D 4 190 ASP 190 190 190 ASP ASP A . n D 4 191 MET 191 191 191 MET MET A . n D 4 192 ASP 192 192 192 ASP ASP A . n D 4 193 VAL 193 193 193 VAL VAL A . n D 4 194 LEU 194 194 194 LEU LEU A . n D 4 195 LEU 195 195 195 LEU LEU A . n D 4 196 THR 196 196 196 THR THR A . n D 4 197 HIS 197 197 197 HIS HIS A . n D 4 198 PRO 198 198 198 PRO PRO A . n D 4 199 SER 199 199 199 SER SER A . n D 4 200 PHE 200 200 200 PHE PHE A . n D 4 201 THR 201 201 201 THR THR A . n D 4 202 SER 202 202 202 SER SER A . n D 4 203 GLU 203 203 203 GLU GLU A . n D 4 204 SER 204 204 204 SER SER A . n D 4 205 THR 205 205 205 THR THR A . n D 4 206 LYS 206 206 206 LYS LYS A . n D 4 207 GLN 207 207 207 GLN GLN A . n D 4 208 PRO 208 208 208 PRO PRO A . n D 4 209 LYS 209 209 209 LYS LYS A . n D 4 210 LEU 210 210 210 LEU LEU A . n D 4 211 LEU 211 211 211 LEU LEU A . n D 4 212 HIS 212 212 212 HIS HIS A . n D 4 213 GLN 213 213 213 GLN GLN A . n D 4 214 VAL 214 214 214 VAL VAL A . n D 4 215 VAL 215 215 215 VAL VAL A . n D 4 216 GLU 216 216 216 GLU GLU A . n D 4 217 GLN 217 217 217 GLN GLN A . n D 4 218 LEU 218 218 218 LEU LEU A . n D 4 219 GLN 219 219 219 GLN GLN A . n D 4 220 LYS 220 220 220 LYS LYS A . n D 4 221 VAL 221 221 221 VAL VAL A . n D 4 222 HIS 222 222 222 HIS HIS A . n D 4 223 PHE 223 223 223 PHE PHE A . n D 4 224 ILE 224 224 224 ILE ILE A . n D 4 225 THR 225 225 225 THR THR A . n D 4 226 ASP 226 226 226 ASP ASP A . n D 4 227 THR 227 227 227 THR THR A . n D 4 228 LEU 228 228 228 LEU LEU A . n D 4 229 SER 229 229 229 SER SER A . n D 4 230 LYS 230 230 230 LYS LYS A . n D 4 231 GLY 231 231 231 GLY GLY A . n D 4 232 GLU 232 232 232 GLU GLU A . n D 4 233 THR 233 233 233 THR THR A . n D 4 234 LYS 234 234 234 LYS LYS A . n D 4 235 PHE 235 235 235 PHE PHE A . n D 4 236 MET 236 236 236 MET MET A . n D 4 237 GLY 237 237 237 GLY GLY A . n D 4 238 VAL 238 238 238 VAL VAL A . n D 4 239 CYS 239 239 239 CYS CYS A . n D 4 240 GLN 240 240 240 GLN GLN A . n D 4 241 LEU 241 241 241 LEU LEU A . n D 4 242 PRO 242 242 242 PRO PRO A . n D 4 243 SER 243 243 243 SER SER A . n D 4 244 LYS 244 244 244 LYS LYS A . n D 4 245 ASN 245 245 245 ASN ASN A . n D 4 246 ASP 246 246 246 ASP ASP A . n D 4 247 GLU 247 247 247 GLU GLU A . n D 4 248 LYS 248 248 248 LYS LYS A . n D 4 249 GLU 249 249 249 GLU GLU A . n D 4 250 TYR 250 250 250 TYR TYR A . n D 4 251 PRO 251 251 251 PRO PRO A . n D 4 252 HIS 252 252 252 HIS HIS A . n D 4 253 ARG 253 253 253 ARG ARG A . n D 4 254 ARG 254 254 254 ARG ARG A . n D 4 255 ILE 255 255 255 ILE ILE A . n D 4 256 ASP 256 256 256 ASP ASP A . n D 4 257 ILE 257 257 257 ILE ILE A . n D 4 258 ARG 258 258 258 ARG ARG A . n D 4 259 LEU 259 259 259 LEU LEU A . n D 4 260 ILE 260 260 260 ILE ILE A . n D 4 261 PRO 261 261 261 PRO PRO A . n D 4 262 LYS 262 262 262 LYS LYS A . n D 4 263 ASP 263 263 263 ASP ASP A . n D 4 264 GLN 264 264 264 GLN GLN A . n D 4 265 TYR 265 265 265 TYR TYR A . n D 4 266 TYR 266 266 266 TYR TYR A . n D 4 267 CYS 267 267 267 CYS CYS A . n D 4 268 GLY 268 268 268 GLY GLY A . n D 4 269 VAL 269 269 269 VAL VAL A . n D 4 270 LEU 270 270 270 LEU LEU A . n D 4 271 TYR 271 271 271 TYR TYR A . n D 4 272 PHE 272 272 272 PHE PHE A . n D 4 273 THR 273 273 273 THR THR A . n D 4 274 GLY 274 274 274 GLY GLY A . n D 4 275 SER 275 275 275 SER SER A . n D 4 276 ASP 276 276 276 ASP ASP A . n D 4 277 ILE 277 277 277 ILE ILE A . n D 4 278 PHE 278 278 278 PHE PHE A . n D 4 279 ASN 279 279 279 ASN ASN A . n D 4 280 LYS 280 280 280 LYS LYS A . n D 4 281 ASN 281 281 281 ASN ASN A . n D 4 282 MET 282 282 282 MET MET A . n D 4 283 ARG 283 283 283 ARG ARG A . n D 4 284 ALA 284 284 284 ALA ALA A . n D 4 285 HIS 285 285 285 HIS HIS A . n D 4 286 ALA 286 286 286 ALA ALA A . n D 4 287 LEU 287 287 287 LEU LEU A . n D 4 288 GLU 288 288 288 GLU GLU A . n D 4 289 LYS 289 289 289 LYS LYS A . n D 4 290 GLY 290 290 290 GLY GLY A . n D 4 291 PHE 291 291 291 PHE PHE A . n D 4 292 THR 292 292 292 THR THR A . n D 4 293 ILE 293 293 293 ILE ILE A . n D 4 294 ASN 294 294 294 ASN ASN A . n D 4 295 GLU 295 295 295 GLU GLU A . n D 4 296 TYR 296 296 296 TYR TYR A . n D 4 297 THR 297 297 297 THR THR A . n D 4 298 ILE 298 298 298 ILE ILE A . n D 4 299 ARG 299 299 299 ARG ARG A . n D 4 300 PRO 300 300 300 PRO PRO A . n D 4 301 LEU 301 301 301 LEU LEU A . n D 4 302 GLY 302 302 302 GLY GLY A . n D 4 303 VAL 303 303 303 VAL VAL A . n D 4 304 THR 304 304 304 THR THR A . n D 4 305 GLY 305 305 305 GLY GLY A . n D 4 306 VAL 306 306 306 VAL VAL A . n D 4 307 ALA 307 307 307 ALA ALA A . n D 4 308 GLY 308 308 308 GLY GLY A . n D 4 309 GLU 309 309 309 GLU GLU A . n D 4 310 PRO 310 310 310 PRO PRO A . n D 4 311 LEU 311 311 311 LEU LEU A . n D 4 312 PRO 312 312 312 PRO PRO A . n D 4 313 VAL 313 313 313 VAL VAL A . n D 4 314 ASP 314 314 314 ASP ASP A . n D 4 315 SER 315 315 315 SER SER A . n D 4 316 GLU 316 316 316 GLU GLU A . n D 4 317 LYS 317 317 317 LYS LYS A . n D 4 318 ASP 318 318 318 ASP ASP A . n D 4 319 ILE 319 319 319 ILE ILE A . n D 4 320 PHE 320 320 320 PHE PHE A . n D 4 321 ASP 321 321 321 ASP ASP A . n D 4 322 TYR 322 322 322 TYR TYR A . n D 4 323 ILE 323 323 323 ILE ILE A . n D 4 324 GLN 324 324 324 GLN GLN A . n D 4 325 TRP 325 325 325 TRP TRP A . n D 4 326 LYS 326 326 326 LYS LYS A . n D 4 327 TYR 327 327 327 TYR TYR A . n D 4 328 ARG 328 328 328 ARG ARG A . n D 4 329 GLU 329 329 329 GLU GLU A . n D 4 330 PRO 330 330 330 PRO PRO A . n D 4 331 LYS 331 331 331 LYS LYS A . n D 4 332 ASP 332 332 332 ASP ASP A . n D 4 333 ARG 333 333 333 ARG ARG A . n D 4 334 SER 334 334 334 SER SER A . n D 4 335 GLU 335 335 335 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 D5M 1 338 338 D5M A T . F 6 NA 1 341 341 NA NA A . G 6 NA 1 342 342 NA NA A . H 7 HOH 1 346 346 HOH HOH D . I 7 HOH 1 344 344 HOH HOH A . I 7 HOH 2 345 345 HOH HOH A . I 7 HOH 3 347 347 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 CNS refinement . ? 3 CNS phasing . ? 4 # _cell.entry_id 1MQ2 _cell.length_a 55.200 _cell.length_b 81.000 _cell.length_c 55.600 _cell.angle_alpha 90.00 _cell.angle_beta 106.10 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MQ2 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # _exptl.entry_id 1MQ2 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 50.45 _exptl_crystal.density_Matthews 2.48 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '20% PEG 3350, 350 mM sodium acetate, 50 mM imidazole at 18 degrees (C), pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 291.0K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 'PEG 3350' ? ? ? 1 2 1 'sodium acetate' ? ? ? 1 3 1 imidazole ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 200.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X9B' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X9B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1MQ2 _reflns.number_all ? _reflns.number_obs 7613 _reflns.percent_possible_obs 81.4 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 3.10 _reflns.d_resolution_low 20 _reflns.pdbx_Rmerge_I_obs 0.119 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 9.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.3 _reflns.R_free_details ? _reflns.limit_k_min ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.10 _reflns_shell.d_res_low 3.21 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 71.7 _reflns_shell.Rmerge_I_obs 0.255 _reflns_shell.meanI_over_sigI_obs 3.3 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1MQ2 _refine.ls_d_res_high 3.1 _refine.ls_d_res_low 20.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7060 _refine.ls_number_reflns_R_free 332 _refine.ls_percent_reflns_obs 81.8 _refine.ls_R_factor_all 0.26 _refine.ls_R_factor_obs 0.26 _refine.ls_R_factor_R_work 0.257 _refine.ls_R_factor_R_free 0.317 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1MQ3 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol 10.0 _refine.solvent_model_param_ksol .1840 _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean 43.2 _refine.aniso_B[1][1] -11.78 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -2.88 _refine.aniso_B[2][2] -11.54 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 23.33 _refine.details ;Used Maximum Likelihood on Intensities (MLI) target function. A MINIMAL AMOUNT OF REFINEMENT WAS PERFORMED BECAUSE THE DATA QUALITY IS POOR. ; _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2613 _refine_hist.pdbx_number_atoms_nucleic_acid 632 _refine_hist.pdbx_number_atoms_ligand 24 _refine_hist.number_atoms_solvent 4 _refine_hist.number_atoms_total 3273 _refine_hist.d_res_high 3.1 _refine_hist.d_res_low 20.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.004 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 0.8 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.135 ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.210 ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.970 ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 1.979 ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1MQ2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1MQ2 _struct.title 'Human DNA Polymerase Beta Complexed With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine and dAMP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1MQ2 _struct_keywords.pdbx_keywords TRANSFERASE/DNA _struct_keywords.text 'TRANSFERASE, DNA, TRANSFERASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 7 ? I N N 7 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP DPOB_HUMAN 4 ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; 1 P06746 ? 2 PDB 1MQ2 1 ? ? 1MQ2 ? 3 PDB 1MQ2 2 ? ? 1MQ2 ? 4 PDB 1MQ2 3 ? ? 1MQ2 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1MQ2 A 1 ? 335 ? P06746 1 ? 335 ? 1 335 2 2 1MQ2 T 1 ? 16 ? 1MQ2 1 ? 16 ? 1 16 3 3 1MQ2 P 1 ? 10 ? 1MQ2 1 ? 10 ? 1 10 4 4 1MQ2 D 1 ? 5 ? 1MQ2 1 ? 5 ? 1 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN D 12 ? VAL D 29 ? ASN A 12 VAL A 29 1 ? 18 HELX_P HELX_P2 2 ALA D 32 ? ALA D 47 ? ALA A 32 ALA A 47 1 ? 16 HELX_P HELX_P3 3 SER D 55 ? LYS D 61 ? SER A 55 LYS A 61 1 ? 7 HELX_P HELX_P4 4 GLY D 66 ? THR D 79 ? GLY A 66 THR A 79 1 ? 14 HELX_P HELX_P5 5 LEU D 82 ? ASP D 91 ? LEU A 82 ASP A 91 1 ? 10 HELX_P HELX_P6 6 ASP D 91 ? THR D 101 ? ASP A 91 THR A 101 1 ? 11 HELX_P HELX_P7 7 GLY D 107 ? GLU D 117 ? GLY A 107 GLU A 117 1 ? 11 HELX_P HELX_P8 8 THR D 121 ? ASN D 128 ? THR A 121 ASN A 128 1 ? 8 HELX_P HELX_P9 9 GLU D 129 ? LEU D 132 ? GLU A 129 LEU A 132 5 ? 4 HELX_P HELX_P10 10 ASN D 133 ? TYR D 142 ? ASN A 133 TYR A 142 1 ? 10 HELX_P HELX_P11 11 TYR D 142 ? LYS D 148 ? TYR A 142 LYS A 148 1 ? 7 HELX_P HELX_P12 12 PRO D 151 ? ASP D 170 ? PRO A 151 ASP A 170 1 ? 20 HELX_P HELX_P13 13 GLY D 179 ? ARG D 182 ? GLY A 179 ARG A 182 5 ? 4 HELX_P HELX_P14 14 LYS D 209 ? VAL D 221 ? LYS A 209 VAL A 221 1 ? 13 HELX_P HELX_P15 15 GLN D 264 ? GLY D 274 ? GLN A 264 GLY A 274 1 ? 11 HELX_P HELX_P16 16 SER D 275 ? GLY D 290 ? SER A 275 GLY A 290 1 ? 16 HELX_P HELX_P17 17 SER D 315 ? ASP D 321 ? SER A 315 ASP A 321 1 ? 7 HELX_P HELX_P18 18 GLU D 329 ? ARG D 333 ? GLU A 329 ARG A 333 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DC 5 "O3'" ? ? ? 1_555 A 8OG 6 P ? ? T DC 5 T 8OG 6 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale2 covale both ? A 8OG 6 "O3'" ? ? ? 1_555 A DT 7 P ? ? T 8OG 6 T DT 7 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale3 covale both ? B DG 9 "O3'" ? ? ? 1_555 B 2DA 10 P ? ? P DG 9 P 2DA 10 1_555 ? ? ? ? ? ? ? 1.608 ? ? metalc1 metalc ? ? B DG 9 OP1 ? ? ? 1_555 F NA . NA ? ? P DG 9 A NA 341 1_555 ? ? ? ? ? ? ? 2.414 ? ? metalc2 metalc ? ? C DC 3 OP1 ? ? ? 1_555 G NA . NA ? ? D DC 3 A NA 342 1_555 ? ? ? ? ? ? ? 2.436 ? ? metalc3 metalc ? ? H HOH . O ? ? ? 1_555 G NA . NA ? ? D HOH 346 A NA 342 1_555 ? ? ? ? ? ? ? 2.361 ? ? metalc4 metalc ? ? D LYS 60 O ? ? ? 1_555 G NA . NA ? ? A LYS 60 A NA 342 1_555 ? ? ? ? ? ? ? 2.346 ? ? metalc5 metalc ? ? D LEU 62 O ? ? ? 1_555 G NA . NA ? ? A LEU 62 A NA 342 1_555 ? ? ? ? ? ? ? 2.630 ? ? metalc6 metalc ? ? D VAL 65 O ? ? ? 1_555 G NA . NA ? ? A VAL 65 A NA 342 1_555 ? ? ? ? ? ? ? 2.380 ? ? metalc7 metalc ? ? D THR 101 O ? ? ? 1_555 F NA . NA ? ? A THR 101 A NA 341 1_555 ? ? ? ? ? ? ? 2.036 ? ? metalc8 metalc ? ? D VAL 103 O ? ? ? 1_555 F NA . NA ? ? A VAL 103 A NA 341 1_555 ? ? ? ? ? ? ? 2.548 ? ? metalc9 metalc ? ? D ILE 106 O ? ? ? 1_555 F NA . NA ? ? A ILE 106 A NA 341 1_555 ? ? ? ? ? ? ? 2.330 ? ? metalc10 metalc ? ? F NA . NA ? ? ? 1_555 I HOH . O ? ? A NA 341 A HOH 344 1_555 ? ? ? ? ? ? ? 2.246 ? ? metalc11 metalc ? ? F NA . NA ? ? ? 1_555 I HOH . O ? ? A NA 341 A HOH 345 1_555 ? ? ? ? ? ? ? 2.679 ? ? metalc12 metalc ? ? G NA . NA ? ? ? 1_555 I HOH . O ? ? A NA 342 A HOH 347 1_555 ? ? ? ? ? ? ? 2.523 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 C DG 5 N1 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 C DG 5 O6 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 C DG 5 N2 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 C DG 4 N1 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 C DG 4 O6 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 C DG 4 N2 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 C DC 3 N3 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 C DC 3 O2 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 C DC 3 N4 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N1 ? ? ? 1_555 C DT 2 N3 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 4 N6 ? ? ? 1_555 C DT 2 O4 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N3 ? ? ? 1_555 C DG 1 N1 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 N4 ? ? ? 1_555 C DG 1 O6 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 5 O2 ? ? ? 1_555 C DG 1 N2 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B 2DA 10 N1 ? ? T DT 7 P 2DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B 2DA 10 N6 ? ? T DT 7 P 2DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 9 N1 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 9 O6 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 9 N2 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 8 N3 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 8 O2 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 8 N4 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 7 N1 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 7 O6 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 7 N2 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 6 N3 ? ? T DA 11 P DT 6 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog27 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 5 N1 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 5 N6 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 13 N3 ? ? ? 1_555 B DG 4 N1 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DC 13 N4 ? ? ? 1_555 B DG 4 O6 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DC 13 O2 ? ? ? 1_555 B DG 4 N2 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DA 14 N1 ? ? ? 1_555 B DT 3 N3 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DA 14 N6 ? ? ? 1_555 B DT 3 O4 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DG 15 N1 ? ? ? 1_555 B DC 2 N3 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DG 15 N2 ? ? ? 1_555 B DC 2 O2 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DG 15 O6 ? ? ? 1_555 B DC 2 N4 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 16 N3 ? ? ? 1_555 B DG 1 N1 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DC 16 N4 ? ? ? 1_555 B DG 1 O6 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DC 16 O2 ? ? ? 1_555 B DG 1 N2 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? B DG 9 ? P DG 9 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? D THR 101 ? A THR 101 ? 1_555 166.4 ? 2 OP1 ? B DG 9 ? P DG 9 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? D VAL 103 ? A VAL 103 ? 1_555 95.9 ? 3 O ? D THR 101 ? A THR 101 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? D VAL 103 ? A VAL 103 ? 1_555 91.4 ? 4 OP1 ? B DG 9 ? P DG 9 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? D ILE 106 ? A ILE 106 ? 1_555 95.2 ? 5 O ? D THR 101 ? A THR 101 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? D ILE 106 ? A ILE 106 ? 1_555 96.6 ? 6 O ? D VAL 103 ? A VAL 103 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? D ILE 106 ? A ILE 106 ? 1_555 87.5 ? 7 OP1 ? B DG 9 ? P DG 9 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? I HOH . ? A HOH 344 ? 1_555 91.0 ? 8 O ? D THR 101 ? A THR 101 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? I HOH . ? A HOH 344 ? 1_555 82.6 ? 9 O ? D VAL 103 ? A VAL 103 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? I HOH . ? A HOH 344 ? 1_555 172.1 ? 10 O ? D ILE 106 ? A ILE 106 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? I HOH . ? A HOH 344 ? 1_555 88.1 ? 11 OP1 ? B DG 9 ? P DG 9 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? I HOH . ? A HOH 345 ? 1_555 82.4 ? 12 O ? D THR 101 ? A THR 101 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? I HOH . ? A HOH 345 ? 1_555 85.8 ? 13 O ? D VAL 103 ? A VAL 103 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? I HOH . ? A HOH 345 ? 1_555 92.6 ? 14 O ? D ILE 106 ? A ILE 106 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? I HOH . ? A HOH 345 ? 1_555 177.5 ? 15 O ? I HOH . ? A HOH 344 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? I HOH . ? A HOH 345 ? 1_555 92.0 ? 16 OP1 ? C DC 3 ? D DC 3 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? H HOH . ? D HOH 346 ? 1_555 85.4 ? 17 OP1 ? C DC 3 ? D DC 3 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? D LYS 60 ? A LYS 60 ? 1_555 174.2 ? 18 O ? H HOH . ? D HOH 346 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? D LYS 60 ? A LYS 60 ? 1_555 92.4 ? 19 OP1 ? C DC 3 ? D DC 3 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? D LEU 62 ? A LEU 62 ? 1_555 100.5 ? 20 O ? H HOH . ? D HOH 346 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? D LEU 62 ? A LEU 62 ? 1_555 172.5 ? 21 O ? D LYS 60 ? A LYS 60 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? D LEU 62 ? A LEU 62 ? 1_555 82.1 ? 22 OP1 ? C DC 3 ? D DC 3 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? D VAL 65 ? A VAL 65 ? 1_555 85.9 ? 23 O ? H HOH . ? D HOH 346 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? D VAL 65 ? A VAL 65 ? 1_555 89.0 ? 24 O ? D LYS 60 ? A LYS 60 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? D VAL 65 ? A VAL 65 ? 1_555 88.6 ? 25 O ? D LEU 62 ? A LEU 62 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? D VAL 65 ? A VAL 65 ? 1_555 96.0 ? 26 OP1 ? C DC 3 ? D DC 3 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? I HOH . ? A HOH 347 ? 1_555 93.0 ? 27 O ? H HOH . ? D HOH 346 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? I HOH . ? A HOH 347 ? 1_555 89.5 ? 28 O ? D LYS 60 ? A LYS 60 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? I HOH . ? A HOH 347 ? 1_555 92.4 ? 29 O ? D LEU 62 ? A LEU 62 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? I HOH . ? A HOH 347 ? 1_555 85.6 ? 30 O ? D VAL 65 ? A VAL 65 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? I HOH . ? A HOH 347 ? 1_555 178.2 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 274 _struct_mon_prot_cis.label_asym_id D _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 274 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 275 _struct_mon_prot_cis.pdbx_label_asym_id_2 D _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 275 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.02 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE D 174 ? VAL D 177 ? ILE A 174 VAL A 177 A 2 MET D 191 ? THR D 196 ? MET A 191 THR A 196 A 3 ARG D 253 ? LEU D 259 ? ARG A 253 LEU A 259 A 4 LYS D 234 ? CYS D 239 ? LYS A 234 CYS A 239 A 5 ILE D 224 ? LYS D 230 ? ILE A 224 LYS A 230 B 1 PHE D 291 ? ILE D 293 ? PHE A 291 ILE A 293 B 2 ILE D 298 ? PRO D 300 ? ILE A 298 PRO A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR D 176 ? N THR A 176 O LEU D 194 ? O LEU A 194 A 2 3 N VAL D 193 ? N VAL A 193 O ASP D 256 ? O ASP A 256 A 3 4 O ARG D 253 ? O ARG A 253 N CYS D 239 ? N CYS A 239 A 4 5 O MET D 236 ? O MET A 236 N SER D 229 ? N SER A 229 B 1 2 N THR D 292 ? N THR A 292 O ARG D 299 ? O ARG A 299 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NA 341 ? 6 'BINDING SITE FOR RESIDUE NA A 341' AC2 Software A NA 342 ? 6 'BINDING SITE FOR RESIDUE NA A 342' AC3 Software T D5M 338 ? 3 'BINDING SITE FOR RESIDUE D5M T 338' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 THR D 101 ? THR A 101 . ? 1_555 ? 2 AC1 6 VAL D 103 ? VAL A 103 . ? 1_555 ? 3 AC1 6 ILE D 106 ? ILE A 106 . ? 1_555 ? 4 AC1 6 HOH I . ? HOH A 344 . ? 1_555 ? 5 AC1 6 HOH I . ? HOH A 345 . ? 1_555 ? 6 AC1 6 DG B 9 ? DG P 9 . ? 1_555 ? 7 AC2 6 LYS D 60 ? LYS A 60 . ? 1_555 ? 8 AC2 6 LEU D 62 ? LEU A 62 . ? 1_555 ? 9 AC2 6 VAL D 65 ? VAL A 65 . ? 1_555 ? 10 AC2 6 HOH I . ? HOH A 347 . ? 1_555 ? 11 AC2 6 DC C 3 ? DC D 3 . ? 1_555 ? 12 AC2 6 HOH H . ? HOH D 346 . ? 1_555 ? 13 AC3 3 ASP D 276 ? ASP A 276 . ? 1_555 ? 14 AC3 3 2DA B 10 ? 2DA P 10 . ? 1_555 ? 15 AC3 3 8OG A 6 ? 8OG T 6 . ? 1_555 ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.520 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.087 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 11 ? ? -74.62 -74.50 2 1 LYS A 81 ? ? -171.75 -178.37 3 1 ASN A 128 ? ? -96.42 42.22 4 1 ASP A 170 ? ? -173.09 125.33 5 1 CYS A 178 ? ? -91.33 -158.61 6 1 SER A 188 ? ? -158.46 -64.02 7 1 ASP A 190 ? ? -170.48 135.18 8 1 SER A 202 ? ? 43.22 -85.01 9 1 THR A 225 ? ? -95.03 -60.56 10 1 ASP A 246 ? ? 68.31 -56.98 11 1 TYR A 265 ? ? -66.84 -71.85 12 1 ASN A 294 ? ? -140.66 35.20 13 1 GLU A 295 ? ? 68.87 -45.72 14 1 ASP A 321 ? ? -85.44 44.59 15 1 TYR A 322 ? ? -146.12 -45.01 16 1 ARG A 333 ? ? -78.38 22.65 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A 8OG 6 T 8OG 6 ? DG ? 2 B 2DA 10 P 2DA 10 ? DA "2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE" # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? D MET 1 2 1 Y 1 A SER 2 ? D SER 2 3 1 Y 1 A LYS 3 ? D LYS 3 4 1 Y 1 A ARG 4 ? D ARG 4 5 1 Y 1 A LYS 5 ? D LYS 5 6 1 Y 1 A ALA 6 ? D ALA 6 7 1 Y 1 A PRO 7 ? D PRO 7 8 1 Y 1 A GLN 8 ? D GLN 8 9 1 Y 1 A GLU 9 ? D GLU 9 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2DA P P N N 1 2DA OP1 O N N 2 2DA OP2 O N N 3 2DA OP3 O N N 4 2DA "O5'" O N N 5 2DA "C5'" C N N 6 2DA "C4'" C N S 7 2DA "O4'" O N N 8 2DA "C3'" C N N 9 2DA "C2'" C N N 10 2DA "C1'" C N R 11 2DA N9 N Y N 12 2DA C8 C Y N 13 2DA N7 N Y N 14 2DA C5 C Y N 15 2DA C6 C Y N 16 2DA N6 N N N 17 2DA N1 N Y N 18 2DA C2 C Y N 19 2DA N3 N Y N 20 2DA C4 C Y N 21 2DA HOP2 H N N 22 2DA HOP3 H N N 23 2DA "H5'" H N N 24 2DA "H5''" H N N 25 2DA "H4'" H N N 26 2DA "H3'1" H N N 27 2DA "H3'2" H N N 28 2DA "H2'" H N N 29 2DA "H2''" H N N 30 2DA "H1'" H N N 31 2DA H8 H N N 32 2DA HN61 H N N 33 2DA HN62 H N N 34 2DA H2 H N N 35 8OG OP3 O N N 36 8OG P P N N 37 8OG OP1 O N N 38 8OG OP2 O N N 39 8OG "O5'" O N N 40 8OG "C5'" C N N 41 8OG "C4'" C N R 42 8OG "O4'" O N N 43 8OG "C3'" C N S 44 8OG "O3'" O N N 45 8OG "C2'" C N N 46 8OG "C1'" C N R 47 8OG N9 N N N 48 8OG C8 C N N 49 8OG N7 N N N 50 8OG C5 C N N 51 8OG C6 C N N 52 8OG O6 O N N 53 8OG N1 N N N 54 8OG C2 C N N 55 8OG N2 N N N 56 8OG N3 N N N 57 8OG C4 C N N 58 8OG O8 O N N 59 8OG HOP3 H N N 60 8OG HOP2 H N N 61 8OG "H5'" H N N 62 8OG "H5''" H N N 63 8OG "H4'" H N N 64 8OG "H3'" H N N 65 8OG "HO3'" H N N 66 8OG "H2'" H N N 67 8OG "H2''" H N N 68 8OG "H1'" H N N 69 8OG H7 H N N 70 8OG H1 H N N 71 8OG H21 H N N 72 8OG H22 H N N 73 ALA N N N N 74 ALA CA C N S 75 ALA C C N N 76 ALA O O N N 77 ALA CB C N N 78 ALA OXT O N N 79 ALA H H N N 80 ALA H2 H N N 81 ALA HA H N N 82 ALA HB1 H N N 83 ALA HB2 H N N 84 ALA HB3 H N N 85 ALA HXT H N N 86 ARG N N N N 87 ARG CA C N S 88 ARG C C N N 89 ARG O O N N 90 ARG CB C N N 91 ARG CG C N N 92 ARG CD C N N 93 ARG NE N N N 94 ARG CZ C N N 95 ARG NH1 N N N 96 ARG NH2 N N N 97 ARG OXT O N N 98 ARG H H N N 99 ARG H2 H N N 100 ARG HA H N N 101 ARG HB2 H N N 102 ARG HB3 H N N 103 ARG HG2 H N N 104 ARG HG3 H N N 105 ARG HD2 H N N 106 ARG HD3 H N N 107 ARG HE H N N 108 ARG HH11 H N N 109 ARG HH12 H N N 110 ARG HH21 H N N 111 ARG HH22 H N N 112 ARG HXT H N N 113 ASN N N N N 114 ASN CA C N S 115 ASN C C N N 116 ASN O O N N 117 ASN CB C N N 118 ASN CG C N N 119 ASN OD1 O N N 120 ASN ND2 N N N 121 ASN OXT O N N 122 ASN H H N N 123 ASN H2 H N N 124 ASN HA H N N 125 ASN HB2 H N N 126 ASN HB3 H N N 127 ASN HD21 H N N 128 ASN HD22 H N N 129 ASN HXT H N N 130 ASP N N N N 131 ASP CA C N S 132 ASP C C N N 133 ASP O O N N 134 ASP CB C N N 135 ASP CG C N N 136 ASP OD1 O N N 137 ASP OD2 O N N 138 ASP OXT O N N 139 ASP H H N N 140 ASP H2 H N N 141 ASP HA H N N 142 ASP HB2 H N N 143 ASP HB3 H N N 144 ASP HD2 H N N 145 ASP HXT H N N 146 CYS N N N N 147 CYS CA C N R 148 CYS C C N N 149 CYS O O N N 150 CYS CB C N N 151 CYS SG S N N 152 CYS OXT O N N 153 CYS H H N N 154 CYS H2 H N N 155 CYS HA H N N 156 CYS HB2 H N N 157 CYS HB3 H N N 158 CYS HG H N N 159 CYS HXT H N N 160 D5M "O5'" O N N 161 D5M "C5'" C N N 162 D5M "C4'" C N R 163 D5M "O4'" O N N 164 D5M "C3'" C N S 165 D5M "O3'" O N N 166 D5M "C2'" C N N 167 D5M "C1'" C N R 168 D5M N9 N Y N 169 D5M C8 C Y N 170 D5M N7 N Y N 171 D5M C5 C Y N 172 D5M C6 C Y N 173 D5M N6 N N N 174 D5M N1 N Y N 175 D5M C2 C Y N 176 D5M N3 N Y N 177 D5M C4 C Y N 178 D5M P P N N 179 D5M O1P O N N 180 D5M O3P O N N 181 D5M O2P O N N 182 D5M "H5'1" H N N 183 D5M "H5'2" H N N 184 D5M "H4'" H N N 185 D5M H1 H N N 186 D5M "H3'" H N N 187 D5M "H2'1" H N N 188 D5M "H2'2" H N N 189 D5M "H1'" H N N 190 D5M H8 H N N 191 D5M HN61 H N N 192 D5M HN62 H N N 193 D5M H2 H N N 194 D5M H3P H N N 195 D5M H2P H N N 196 DA OP3 O N N 197 DA P P N N 198 DA OP1 O N N 199 DA OP2 O N N 200 DA "O5'" O N N 201 DA "C5'" C N N 202 DA "C4'" C N R 203 DA "O4'" O N N 204 DA "C3'" C N S 205 DA "O3'" O N N 206 DA "C2'" C N N 207 DA "C1'" C N R 208 DA N9 N Y N 209 DA C8 C Y N 210 DA N7 N Y N 211 DA C5 C Y N 212 DA C6 C Y N 213 DA N6 N N N 214 DA N1 N Y N 215 DA C2 C Y N 216 DA N3 N Y N 217 DA C4 C Y N 218 DA HOP3 H N N 219 DA HOP2 H N N 220 DA "H5'" H N N 221 DA "H5''" H N N 222 DA "H4'" H N N 223 DA "H3'" H N N 224 DA "HO3'" H N N 225 DA "H2'" H N N 226 DA "H2''" H N N 227 DA "H1'" H N N 228 DA H8 H N N 229 DA H61 H N N 230 DA H62 H N N 231 DA H2 H N N 232 DC OP3 O N N 233 DC P P N N 234 DC OP1 O N N 235 DC OP2 O N N 236 DC "O5'" O N N 237 DC "C5'" C N N 238 DC "C4'" C N R 239 DC "O4'" O N N 240 DC "C3'" C N S 241 DC "O3'" O N N 242 DC "C2'" C N N 243 DC "C1'" C N R 244 DC N1 N N N 245 DC C2 C N N 246 DC O2 O N N 247 DC N3 N N N 248 DC C4 C N N 249 DC N4 N N N 250 DC C5 C N N 251 DC C6 C N N 252 DC HOP3 H N N 253 DC HOP2 H N N 254 DC "H5'" H N N 255 DC "H5''" H N N 256 DC "H4'" H N N 257 DC "H3'" H N N 258 DC "HO3'" H N N 259 DC "H2'" H N N 260 DC "H2''" H N N 261 DC "H1'" H N N 262 DC H41 H N N 263 DC H42 H N N 264 DC H5 H N N 265 DC H6 H N N 266 DG OP3 O N N 267 DG P P N N 268 DG OP1 O N N 269 DG OP2 O N N 270 DG "O5'" O N N 271 DG "C5'" C N N 272 DG "C4'" C N R 273 DG "O4'" O N N 274 DG "C3'" C N S 275 DG "O3'" O N N 276 DG "C2'" C N N 277 DG "C1'" C N R 278 DG N9 N Y N 279 DG C8 C Y N 280 DG N7 N Y N 281 DG C5 C Y N 282 DG C6 C N N 283 DG O6 O N N 284 DG N1 N N N 285 DG C2 C N N 286 DG N2 N N N 287 DG N3 N N N 288 DG C4 C Y N 289 DG HOP3 H N N 290 DG HOP2 H N N 291 DG "H5'" H N N 292 DG "H5''" H N N 293 DG "H4'" H N N 294 DG "H3'" H N N 295 DG "HO3'" H N N 296 DG "H2'" H N N 297 DG "H2''" H N N 298 DG "H1'" H N N 299 DG H8 H N N 300 DG H1 H N N 301 DG H21 H N N 302 DG H22 H N N 303 DT OP3 O N N 304 DT P P N N 305 DT OP1 O N N 306 DT OP2 O N N 307 DT "O5'" O N N 308 DT "C5'" C N N 309 DT "C4'" C N R 310 DT "O4'" O N N 311 DT "C3'" C N S 312 DT "O3'" O N N 313 DT "C2'" C N N 314 DT "C1'" C N R 315 DT N1 N N N 316 DT C2 C N N 317 DT O2 O N N 318 DT N3 N N N 319 DT C4 C N N 320 DT O4 O N N 321 DT C5 C N N 322 DT C7 C N N 323 DT C6 C N N 324 DT HOP3 H N N 325 DT HOP2 H N N 326 DT "H5'" H N N 327 DT "H5''" H N N 328 DT "H4'" H N N 329 DT "H3'" H N N 330 DT "HO3'" H N N 331 DT "H2'" H N N 332 DT "H2''" H N N 333 DT "H1'" H N N 334 DT H3 H N N 335 DT H71 H N N 336 DT H72 H N N 337 DT H73 H N N 338 DT H6 H N N 339 GLN N N N N 340 GLN CA C N S 341 GLN C C N N 342 GLN O O N N 343 GLN CB C N N 344 GLN CG C N N 345 GLN CD C N N 346 GLN OE1 O N N 347 GLN NE2 N N N 348 GLN OXT O N N 349 GLN H H N N 350 GLN H2 H N N 351 GLN HA H N N 352 GLN HB2 H N N 353 GLN HB3 H N N 354 GLN HG2 H N N 355 GLN HG3 H N N 356 GLN HE21 H N N 357 GLN HE22 H N N 358 GLN HXT H N N 359 GLU N N N N 360 GLU CA C N S 361 GLU C C N N 362 GLU O O N N 363 GLU CB C N N 364 GLU CG C N N 365 GLU CD C N N 366 GLU OE1 O N N 367 GLU OE2 O N N 368 GLU OXT O N N 369 GLU H H N N 370 GLU H2 H N N 371 GLU HA H N N 372 GLU HB2 H N N 373 GLU HB3 H N N 374 GLU HG2 H N N 375 GLU HG3 H N N 376 GLU HE2 H N N 377 GLU HXT H N N 378 GLY N N N N 379 GLY CA C N N 380 GLY C C N N 381 GLY O O N N 382 GLY OXT O N N 383 GLY H H N N 384 GLY H2 H N N 385 GLY HA2 H N N 386 GLY HA3 H N N 387 GLY HXT H N N 388 HIS N N N N 389 HIS CA C N S 390 HIS C C N N 391 HIS O O N N 392 HIS CB C N N 393 HIS CG C Y N 394 HIS ND1 N Y N 395 HIS CD2 C Y N 396 HIS CE1 C Y N 397 HIS NE2 N Y N 398 HIS OXT O N N 399 HIS H H N N 400 HIS H2 H N N 401 HIS HA H N N 402 HIS HB2 H N N 403 HIS HB3 H N N 404 HIS HD1 H N N 405 HIS HD2 H N N 406 HIS HE1 H N N 407 HIS HE2 H N N 408 HIS HXT H N N 409 HOH O O N N 410 HOH H1 H N N 411 HOH H2 H N N 412 ILE N N N N 413 ILE CA C N S 414 ILE C C N N 415 ILE O O N N 416 ILE CB C N S 417 ILE CG1 C N N 418 ILE CG2 C N N 419 ILE CD1 C N N 420 ILE OXT O N N 421 ILE H H N N 422 ILE H2 H N N 423 ILE HA H N N 424 ILE HB H N N 425 ILE HG12 H N N 426 ILE HG13 H N N 427 ILE HG21 H N N 428 ILE HG22 H N N 429 ILE HG23 H N N 430 ILE HD11 H N N 431 ILE HD12 H N N 432 ILE HD13 H N N 433 ILE HXT H N N 434 LEU N N N N 435 LEU CA C N S 436 LEU C C N N 437 LEU O O N N 438 LEU CB C N N 439 LEU CG C N N 440 LEU CD1 C N N 441 LEU CD2 C N N 442 LEU OXT O N N 443 LEU H H N N 444 LEU H2 H N N 445 LEU HA H N N 446 LEU HB2 H N N 447 LEU HB3 H N N 448 LEU HG H N N 449 LEU HD11 H N N 450 LEU HD12 H N N 451 LEU HD13 H N N 452 LEU HD21 H N N 453 LEU HD22 H N N 454 LEU HD23 H N N 455 LEU HXT H N N 456 LYS N N N N 457 LYS CA C N S 458 LYS C C N N 459 LYS O O N N 460 LYS CB C N N 461 LYS CG C N N 462 LYS CD C N N 463 LYS CE C N N 464 LYS NZ N N N 465 LYS OXT O N N 466 LYS H H N N 467 LYS H2 H N N 468 LYS HA H N N 469 LYS HB2 H N N 470 LYS HB3 H N N 471 LYS HG2 H N N 472 LYS HG3 H N N 473 LYS HD2 H N N 474 LYS HD3 H N N 475 LYS HE2 H N N 476 LYS HE3 H N N 477 LYS HZ1 H N N 478 LYS HZ2 H N N 479 LYS HZ3 H N N 480 LYS HXT H N N 481 MET N N N N 482 MET CA C N S 483 MET C C N N 484 MET O O N N 485 MET CB C N N 486 MET CG C N N 487 MET SD S N N 488 MET CE C N N 489 MET OXT O N N 490 MET H H N N 491 MET H2 H N N 492 MET HA H N N 493 MET HB2 H N N 494 MET HB3 H N N 495 MET HG2 H N N 496 MET HG3 H N N 497 MET HE1 H N N 498 MET HE2 H N N 499 MET HE3 H N N 500 MET HXT H N N 501 NA NA NA N N 502 PHE N N N N 503 PHE CA C N S 504 PHE C C N N 505 PHE O O N N 506 PHE CB C N N 507 PHE CG C Y N 508 PHE CD1 C Y N 509 PHE CD2 C Y N 510 PHE CE1 C Y N 511 PHE CE2 C Y N 512 PHE CZ C Y N 513 PHE OXT O N N 514 PHE H H N N 515 PHE H2 H N N 516 PHE HA H N N 517 PHE HB2 H N N 518 PHE HB3 H N N 519 PHE HD1 H N N 520 PHE HD2 H N N 521 PHE HE1 H N N 522 PHE HE2 H N N 523 PHE HZ H N N 524 PHE HXT H N N 525 PRO N N N N 526 PRO CA C N S 527 PRO C C N N 528 PRO O O N N 529 PRO CB C N N 530 PRO CG C N N 531 PRO CD C N N 532 PRO OXT O N N 533 PRO H H N N 534 PRO HA H N N 535 PRO HB2 H N N 536 PRO HB3 H N N 537 PRO HG2 H N N 538 PRO HG3 H N N 539 PRO HD2 H N N 540 PRO HD3 H N N 541 PRO HXT H N N 542 SER N N N N 543 SER CA C N S 544 SER C C N N 545 SER O O N N 546 SER CB C N N 547 SER OG O N N 548 SER OXT O N N 549 SER H H N N 550 SER H2 H N N 551 SER HA H N N 552 SER HB2 H N N 553 SER HB3 H N N 554 SER HG H N N 555 SER HXT H N N 556 THR N N N N 557 THR CA C N S 558 THR C C N N 559 THR O O N N 560 THR CB C N R 561 THR OG1 O N N 562 THR CG2 C N N 563 THR OXT O N N 564 THR H H N N 565 THR H2 H N N 566 THR HA H N N 567 THR HB H N N 568 THR HG1 H N N 569 THR HG21 H N N 570 THR HG22 H N N 571 THR HG23 H N N 572 THR HXT H N N 573 TRP N N N N 574 TRP CA C N S 575 TRP C C N N 576 TRP O O N N 577 TRP CB C N N 578 TRP CG C Y N 579 TRP CD1 C Y N 580 TRP CD2 C Y N 581 TRP NE1 N Y N 582 TRP CE2 C Y N 583 TRP CE3 C Y N 584 TRP CZ2 C Y N 585 TRP CZ3 C Y N 586 TRP CH2 C Y N 587 TRP OXT O N N 588 TRP H H N N 589 TRP H2 H N N 590 TRP HA H N N 591 TRP HB2 H N N 592 TRP HB3 H N N 593 TRP HD1 H N N 594 TRP HE1 H N N 595 TRP HE3 H N N 596 TRP HZ2 H N N 597 TRP HZ3 H N N 598 TRP HH2 H N N 599 TRP HXT H N N 600 TYR N N N N 601 TYR CA C N S 602 TYR C C N N 603 TYR O O N N 604 TYR CB C N N 605 TYR CG C Y N 606 TYR CD1 C Y N 607 TYR CD2 C Y N 608 TYR CE1 C Y N 609 TYR CE2 C Y N 610 TYR CZ C Y N 611 TYR OH O N N 612 TYR OXT O N N 613 TYR H H N N 614 TYR H2 H N N 615 TYR HA H N N 616 TYR HB2 H N N 617 TYR HB3 H N N 618 TYR HD1 H N N 619 TYR HD2 H N N 620 TYR HE1 H N N 621 TYR HE2 H N N 622 TYR HH H N N 623 TYR HXT H N N 624 VAL N N N N 625 VAL CA C N S 626 VAL C C N N 627 VAL O O N N 628 VAL CB C N N 629 VAL CG1 C N N 630 VAL CG2 C N N 631 VAL OXT O N N 632 VAL H H N N 633 VAL H2 H N N 634 VAL HA H N N 635 VAL HB H N N 636 VAL HG11 H N N 637 VAL HG12 H N N 638 VAL HG13 H N N 639 VAL HG21 H N N 640 VAL HG22 H N N 641 VAL HG23 H N N 642 VAL HXT H N N 643 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2DA P OP1 doub N N 1 2DA P OP2 sing N N 2 2DA P OP3 sing N N 3 2DA P "O5'" sing N N 4 2DA OP2 HOP2 sing N N 5 2DA OP3 HOP3 sing N N 6 2DA "O5'" "C5'" sing N N 7 2DA "C5'" "C4'" sing N N 8 2DA "C5'" "H5'" sing N N 9 2DA "C5'" "H5''" sing N N 10 2DA "C4'" "O4'" sing N N 11 2DA "C4'" "C3'" sing N N 12 2DA "C4'" "H4'" sing N N 13 2DA "O4'" "C1'" sing N N 14 2DA "C3'" "C2'" sing N N 15 2DA "C3'" "H3'1" sing N N 16 2DA "C3'" "H3'2" sing N N 17 2DA "C2'" "C1'" sing N N 18 2DA "C2'" "H2'" sing N N 19 2DA "C2'" "H2''" sing N N 20 2DA "C1'" N9 sing N N 21 2DA "C1'" "H1'" sing N N 22 2DA N9 C8 sing Y N 23 2DA N9 C4 sing Y N 24 2DA C8 N7 doub Y N 25 2DA C8 H8 sing N N 26 2DA N7 C5 sing Y N 27 2DA C5 C6 sing Y N 28 2DA C5 C4 doub Y N 29 2DA C6 N6 sing N N 30 2DA C6 N1 doub Y N 31 2DA N6 HN61 sing N N 32 2DA N6 HN62 sing N N 33 2DA N1 C2 sing Y N 34 2DA C2 N3 doub Y N 35 2DA C2 H2 sing N N 36 2DA N3 C4 sing Y N 37 8OG OP3 P sing N N 38 8OG OP3 HOP3 sing N N 39 8OG P OP1 doub N N 40 8OG P OP2 sing N N 41 8OG P "O5'" sing N N 42 8OG OP2 HOP2 sing N N 43 8OG "O5'" "C5'" sing N N 44 8OG "C5'" "C4'" sing N N 45 8OG "C5'" "H5'" sing N N 46 8OG "C5'" "H5''" sing N N 47 8OG "C4'" "O4'" sing N N 48 8OG "C4'" "C3'" sing N N 49 8OG "C4'" "H4'" sing N N 50 8OG "O4'" "C1'" sing N N 51 8OG "C3'" "O3'" sing N N 52 8OG "C3'" "C2'" sing N N 53 8OG "C3'" "H3'" sing N N 54 8OG "O3'" "HO3'" sing N N 55 8OG "C2'" "C1'" sing N N 56 8OG "C2'" "H2'" sing N N 57 8OG "C2'" "H2''" sing N N 58 8OG "C1'" N9 sing N N 59 8OG "C1'" "H1'" sing N N 60 8OG N9 C8 sing N N 61 8OG N9 C4 sing N N 62 8OG C8 N7 sing N N 63 8OG C8 O8 doub N N 64 8OG N7 C5 sing N N 65 8OG N7 H7 sing N N 66 8OG C5 C6 sing N N 67 8OG C5 C4 doub N N 68 8OG C6 O6 doub N N 69 8OG C6 N1 sing N N 70 8OG N1 C2 sing N N 71 8OG N1 H1 sing N N 72 8OG C2 N2 sing N N 73 8OG C2 N3 doub N N 74 8OG N2 H21 sing N N 75 8OG N2 H22 sing N N 76 8OG N3 C4 sing N N 77 ALA N CA sing N N 78 ALA N H sing N N 79 ALA N H2 sing N N 80 ALA CA C sing N N 81 ALA CA CB sing N N 82 ALA CA HA sing N N 83 ALA C O doub N N 84 ALA C OXT sing N N 85 ALA CB HB1 sing N N 86 ALA CB HB2 sing N N 87 ALA CB HB3 sing N N 88 ALA OXT HXT sing N N 89 ARG N CA sing N N 90 ARG N H sing N N 91 ARG N H2 sing N N 92 ARG CA C sing N N 93 ARG CA CB sing N N 94 ARG CA HA sing N N 95 ARG C O doub N N 96 ARG C OXT sing N N 97 ARG CB CG sing N N 98 ARG CB HB2 sing N N 99 ARG CB HB3 sing N N 100 ARG CG CD sing N N 101 ARG CG HG2 sing N N 102 ARG CG HG3 sing N N 103 ARG CD NE sing N N 104 ARG CD HD2 sing N N 105 ARG CD HD3 sing N N 106 ARG NE CZ sing N N 107 ARG NE HE sing N N 108 ARG CZ NH1 sing N N 109 ARG CZ NH2 doub N N 110 ARG NH1 HH11 sing N N 111 ARG NH1 HH12 sing N N 112 ARG NH2 HH21 sing N N 113 ARG NH2 HH22 sing N N 114 ARG OXT HXT sing N N 115 ASN N CA sing N N 116 ASN N H sing N N 117 ASN N H2 sing N N 118 ASN CA C sing N N 119 ASN CA CB sing N N 120 ASN CA HA sing N N 121 ASN C O doub N N 122 ASN C OXT sing N N 123 ASN CB CG sing N N 124 ASN CB HB2 sing N N 125 ASN CB HB3 sing N N 126 ASN CG OD1 doub N N 127 ASN CG ND2 sing N N 128 ASN ND2 HD21 sing N N 129 ASN ND2 HD22 sing N N 130 ASN OXT HXT sing N N 131 ASP N CA sing N N 132 ASP N H sing N N 133 ASP N H2 sing N N 134 ASP CA C sing N N 135 ASP CA CB sing N N 136 ASP CA HA sing N N 137 ASP C O doub N N 138 ASP C OXT sing N N 139 ASP CB CG sing N N 140 ASP CB HB2 sing N N 141 ASP CB HB3 sing N N 142 ASP CG OD1 doub N N 143 ASP CG OD2 sing N N 144 ASP OD2 HD2 sing N N 145 ASP OXT HXT sing N N 146 CYS N CA sing N N 147 CYS N H sing N N 148 CYS N H2 sing N N 149 CYS CA C sing N N 150 CYS CA CB sing N N 151 CYS CA HA sing N N 152 CYS C O doub N N 153 CYS C OXT sing N N 154 CYS CB SG sing N N 155 CYS CB HB2 sing N N 156 CYS CB HB3 sing N N 157 CYS SG HG sing N N 158 CYS OXT HXT sing N N 159 D5M "O5'" "C5'" sing N N 160 D5M "O5'" P sing N N 161 D5M "C5'" "C4'" sing N N 162 D5M "C5'" "H5'1" sing N N 163 D5M "C5'" "H5'2" sing N N 164 D5M "C4'" "O4'" sing N N 165 D5M "C4'" "C3'" sing N N 166 D5M "C4'" "H4'" sing N N 167 D5M "O4'" "C1'" sing N N 168 D5M "C3'" "O3'" sing N N 169 D5M "C3'" "C2'" sing N N 170 D5M "C3'" H1 sing N N 171 D5M "O3'" "H3'" sing N N 172 D5M "C2'" "C1'" sing N N 173 D5M "C2'" "H2'1" sing N N 174 D5M "C2'" "H2'2" sing N N 175 D5M "C1'" N9 sing N N 176 D5M "C1'" "H1'" sing N N 177 D5M N9 C8 sing Y N 178 D5M N9 C4 sing Y N 179 D5M C8 N7 doub Y N 180 D5M C8 H8 sing N N 181 D5M N7 C5 sing Y N 182 D5M C5 C6 sing Y N 183 D5M C5 C4 doub Y N 184 D5M C6 N6 sing N N 185 D5M C6 N1 doub Y N 186 D5M N6 HN61 sing N N 187 D5M N6 HN62 sing N N 188 D5M N1 C2 sing Y N 189 D5M C2 N3 doub Y N 190 D5M C2 H2 sing N N 191 D5M N3 C4 sing Y N 192 D5M P O1P doub N N 193 D5M P O3P sing N N 194 D5M P O2P sing N N 195 D5M O3P H3P sing N N 196 D5M O2P H2P sing N N 197 DA OP3 P sing N N 198 DA OP3 HOP3 sing N N 199 DA P OP1 doub N N 200 DA P OP2 sing N N 201 DA P "O5'" sing N N 202 DA OP2 HOP2 sing N N 203 DA "O5'" "C5'" sing N N 204 DA "C5'" "C4'" sing N N 205 DA "C5'" "H5'" sing N N 206 DA "C5'" "H5''" sing N N 207 DA "C4'" "O4'" sing N N 208 DA "C4'" "C3'" sing N N 209 DA "C4'" "H4'" sing N N 210 DA "O4'" "C1'" sing N N 211 DA "C3'" "O3'" sing N N 212 DA "C3'" "C2'" sing N N 213 DA "C3'" "H3'" sing N N 214 DA "O3'" "HO3'" sing N N 215 DA "C2'" "C1'" sing N N 216 DA "C2'" "H2'" sing N N 217 DA "C2'" "H2''" sing N N 218 DA "C1'" N9 sing N N 219 DA "C1'" "H1'" sing N N 220 DA N9 C8 sing Y N 221 DA N9 C4 sing Y N 222 DA C8 N7 doub Y N 223 DA C8 H8 sing N N 224 DA N7 C5 sing Y N 225 DA C5 C6 sing Y N 226 DA C5 C4 doub Y N 227 DA C6 N6 sing N N 228 DA C6 N1 doub Y N 229 DA N6 H61 sing N N 230 DA N6 H62 sing N N 231 DA N1 C2 sing Y N 232 DA C2 N3 doub Y N 233 DA C2 H2 sing N N 234 DA N3 C4 sing Y N 235 DC OP3 P sing N N 236 DC OP3 HOP3 sing N N 237 DC P OP1 doub N N 238 DC P OP2 sing N N 239 DC P "O5'" sing N N 240 DC OP2 HOP2 sing N N 241 DC "O5'" "C5'" sing N N 242 DC "C5'" "C4'" sing N N 243 DC "C5'" "H5'" sing N N 244 DC "C5'" "H5''" sing N N 245 DC "C4'" "O4'" sing N N 246 DC "C4'" "C3'" sing N N 247 DC "C4'" "H4'" sing N N 248 DC "O4'" "C1'" sing N N 249 DC "C3'" "O3'" sing N N 250 DC "C3'" "C2'" sing N N 251 DC "C3'" "H3'" sing N N 252 DC "O3'" "HO3'" sing N N 253 DC "C2'" "C1'" sing N N 254 DC "C2'" "H2'" sing N N 255 DC "C2'" "H2''" sing N N 256 DC "C1'" N1 sing N N 257 DC "C1'" "H1'" sing N N 258 DC N1 C2 sing N N 259 DC N1 C6 sing N N 260 DC C2 O2 doub N N 261 DC C2 N3 sing N N 262 DC N3 C4 doub N N 263 DC C4 N4 sing N N 264 DC C4 C5 sing N N 265 DC N4 H41 sing N N 266 DC N4 H42 sing N N 267 DC C5 C6 doub N N 268 DC C5 H5 sing N N 269 DC C6 H6 sing N N 270 DG OP3 P sing N N 271 DG OP3 HOP3 sing N N 272 DG P OP1 doub N N 273 DG P OP2 sing N N 274 DG P "O5'" sing N N 275 DG OP2 HOP2 sing N N 276 DG "O5'" "C5'" sing N N 277 DG "C5'" "C4'" sing N N 278 DG "C5'" "H5'" sing N N 279 DG "C5'" "H5''" sing N N 280 DG "C4'" "O4'" sing N N 281 DG "C4'" "C3'" sing N N 282 DG "C4'" "H4'" sing N N 283 DG "O4'" "C1'" sing N N 284 DG "C3'" "O3'" sing N N 285 DG "C3'" "C2'" sing N N 286 DG "C3'" "H3'" sing N N 287 DG "O3'" "HO3'" sing N N 288 DG "C2'" "C1'" sing N N 289 DG "C2'" "H2'" sing N N 290 DG "C2'" "H2''" sing N N 291 DG "C1'" N9 sing N N 292 DG "C1'" "H1'" sing N N 293 DG N9 C8 sing Y N 294 DG N9 C4 sing Y N 295 DG C8 N7 doub Y N 296 DG C8 H8 sing N N 297 DG N7 C5 sing Y N 298 DG C5 C6 sing N N 299 DG C5 C4 doub Y N 300 DG C6 O6 doub N N 301 DG C6 N1 sing N N 302 DG N1 C2 sing N N 303 DG N1 H1 sing N N 304 DG C2 N2 sing N N 305 DG C2 N3 doub N N 306 DG N2 H21 sing N N 307 DG N2 H22 sing N N 308 DG N3 C4 sing N N 309 DT OP3 P sing N N 310 DT OP3 HOP3 sing N N 311 DT P OP1 doub N N 312 DT P OP2 sing N N 313 DT P "O5'" sing N N 314 DT OP2 HOP2 sing N N 315 DT "O5'" "C5'" sing N N 316 DT "C5'" "C4'" sing N N 317 DT "C5'" "H5'" sing N N 318 DT "C5'" "H5''" sing N N 319 DT "C4'" "O4'" sing N N 320 DT "C4'" "C3'" sing N N 321 DT "C4'" "H4'" sing N N 322 DT "O4'" "C1'" sing N N 323 DT "C3'" "O3'" sing N N 324 DT "C3'" "C2'" sing N N 325 DT "C3'" "H3'" sing N N 326 DT "O3'" "HO3'" sing N N 327 DT "C2'" "C1'" sing N N 328 DT "C2'" "H2'" sing N N 329 DT "C2'" "H2''" sing N N 330 DT "C1'" N1 sing N N 331 DT "C1'" "H1'" sing N N 332 DT N1 C2 sing N N 333 DT N1 C6 sing N N 334 DT C2 O2 doub N N 335 DT C2 N3 sing N N 336 DT N3 C4 sing N N 337 DT N3 H3 sing N N 338 DT C4 O4 doub N N 339 DT C4 C5 sing N N 340 DT C5 C7 sing N N 341 DT C5 C6 doub N N 342 DT C7 H71 sing N N 343 DT C7 H72 sing N N 344 DT C7 H73 sing N N 345 DT C6 H6 sing N N 346 GLN N CA sing N N 347 GLN N H sing N N 348 GLN N H2 sing N N 349 GLN CA C sing N N 350 GLN CA CB sing N N 351 GLN CA HA sing N N 352 GLN C O doub N N 353 GLN C OXT sing N N 354 GLN CB CG sing N N 355 GLN CB HB2 sing N N 356 GLN CB HB3 sing N N 357 GLN CG CD sing N N 358 GLN CG HG2 sing N N 359 GLN CG HG3 sing N N 360 GLN CD OE1 doub N N 361 GLN CD NE2 sing N N 362 GLN NE2 HE21 sing N N 363 GLN NE2 HE22 sing N N 364 GLN OXT HXT sing N N 365 GLU N CA sing N N 366 GLU N H sing N N 367 GLU N H2 sing N N 368 GLU CA C sing N N 369 GLU CA CB sing N N 370 GLU CA HA sing N N 371 GLU C O doub N N 372 GLU C OXT sing N N 373 GLU CB CG sing N N 374 GLU CB HB2 sing N N 375 GLU CB HB3 sing N N 376 GLU CG CD sing N N 377 GLU CG HG2 sing N N 378 GLU CG HG3 sing N N 379 GLU CD OE1 doub N N 380 GLU CD OE2 sing N N 381 GLU OE2 HE2 sing N N 382 GLU OXT HXT sing N N 383 GLY N CA sing N N 384 GLY N H sing N N 385 GLY N H2 sing N N 386 GLY CA C sing N N 387 GLY CA HA2 sing N N 388 GLY CA HA3 sing N N 389 GLY C O doub N N 390 GLY C OXT sing N N 391 GLY OXT HXT sing N N 392 HIS N CA sing N N 393 HIS N H sing N N 394 HIS N H2 sing N N 395 HIS CA C sing N N 396 HIS CA CB sing N N 397 HIS CA HA sing N N 398 HIS C O doub N N 399 HIS C OXT sing N N 400 HIS CB CG sing N N 401 HIS CB HB2 sing N N 402 HIS CB HB3 sing N N 403 HIS CG ND1 sing Y N 404 HIS CG CD2 doub Y N 405 HIS ND1 CE1 doub Y N 406 HIS ND1 HD1 sing N N 407 HIS CD2 NE2 sing Y N 408 HIS CD2 HD2 sing N N 409 HIS CE1 NE2 sing Y N 410 HIS CE1 HE1 sing N N 411 HIS NE2 HE2 sing N N 412 HIS OXT HXT sing N N 413 HOH O H1 sing N N 414 HOH O H2 sing N N 415 ILE N CA sing N N 416 ILE N H sing N N 417 ILE N H2 sing N N 418 ILE CA C sing N N 419 ILE CA CB sing N N 420 ILE CA HA sing N N 421 ILE C O doub N N 422 ILE C OXT sing N N 423 ILE CB CG1 sing N N 424 ILE CB CG2 sing N N 425 ILE CB HB sing N N 426 ILE CG1 CD1 sing N N 427 ILE CG1 HG12 sing N N 428 ILE CG1 HG13 sing N N 429 ILE CG2 HG21 sing N N 430 ILE CG2 HG22 sing N N 431 ILE CG2 HG23 sing N N 432 ILE CD1 HD11 sing N N 433 ILE CD1 HD12 sing N N 434 ILE CD1 HD13 sing N N 435 ILE OXT HXT sing N N 436 LEU N CA sing N N 437 LEU N H sing N N 438 LEU N H2 sing N N 439 LEU CA C sing N N 440 LEU CA CB sing N N 441 LEU CA HA sing N N 442 LEU C O doub N N 443 LEU C OXT sing N N 444 LEU CB CG sing N N 445 LEU CB HB2 sing N N 446 LEU CB HB3 sing N N 447 LEU CG CD1 sing N N 448 LEU CG CD2 sing N N 449 LEU CG HG sing N N 450 LEU CD1 HD11 sing N N 451 LEU CD1 HD12 sing N N 452 LEU CD1 HD13 sing N N 453 LEU CD2 HD21 sing N N 454 LEU CD2 HD22 sing N N 455 LEU CD2 HD23 sing N N 456 LEU OXT HXT sing N N 457 LYS N CA sing N N 458 LYS N H sing N N 459 LYS N H2 sing N N 460 LYS CA C sing N N 461 LYS CA CB sing N N 462 LYS CA HA sing N N 463 LYS C O doub N N 464 LYS C OXT sing N N 465 LYS CB CG sing N N 466 LYS CB HB2 sing N N 467 LYS CB HB3 sing N N 468 LYS CG CD sing N N 469 LYS CG HG2 sing N N 470 LYS CG HG3 sing N N 471 LYS CD CE sing N N 472 LYS CD HD2 sing N N 473 LYS CD HD3 sing N N 474 LYS CE NZ sing N N 475 LYS CE HE2 sing N N 476 LYS CE HE3 sing N N 477 LYS NZ HZ1 sing N N 478 LYS NZ HZ2 sing N N 479 LYS NZ HZ3 sing N N 480 LYS OXT HXT sing N N 481 MET N CA sing N N 482 MET N H sing N N 483 MET N H2 sing N N 484 MET CA C sing N N 485 MET CA CB sing N N 486 MET CA HA sing N N 487 MET C O doub N N 488 MET C OXT sing N N 489 MET CB CG sing N N 490 MET CB HB2 sing N N 491 MET CB HB3 sing N N 492 MET CG SD sing N N 493 MET CG HG2 sing N N 494 MET CG HG3 sing N N 495 MET SD CE sing N N 496 MET CE HE1 sing N N 497 MET CE HE2 sing N N 498 MET CE HE3 sing N N 499 MET OXT HXT sing N N 500 PHE N CA sing N N 501 PHE N H sing N N 502 PHE N H2 sing N N 503 PHE CA C sing N N 504 PHE CA CB sing N N 505 PHE CA HA sing N N 506 PHE C O doub N N 507 PHE C OXT sing N N 508 PHE CB CG sing N N 509 PHE CB HB2 sing N N 510 PHE CB HB3 sing N N 511 PHE CG CD1 doub Y N 512 PHE CG CD2 sing Y N 513 PHE CD1 CE1 sing Y N 514 PHE CD1 HD1 sing N N 515 PHE CD2 CE2 doub Y N 516 PHE CD2 HD2 sing N N 517 PHE CE1 CZ doub Y N 518 PHE CE1 HE1 sing N N 519 PHE CE2 CZ sing Y N 520 PHE CE2 HE2 sing N N 521 PHE CZ HZ sing N N 522 PHE OXT HXT sing N N 523 PRO N CA sing N N 524 PRO N CD sing N N 525 PRO N H sing N N 526 PRO CA C sing N N 527 PRO CA CB sing N N 528 PRO CA HA sing N N 529 PRO C O doub N N 530 PRO C OXT sing N N 531 PRO CB CG sing N N 532 PRO CB HB2 sing N N 533 PRO CB HB3 sing N N 534 PRO CG CD sing N N 535 PRO CG HG2 sing N N 536 PRO CG HG3 sing N N 537 PRO CD HD2 sing N N 538 PRO CD HD3 sing N N 539 PRO OXT HXT sing N N 540 SER N CA sing N N 541 SER N H sing N N 542 SER N H2 sing N N 543 SER CA C sing N N 544 SER CA CB sing N N 545 SER CA HA sing N N 546 SER C O doub N N 547 SER C OXT sing N N 548 SER CB OG sing N N 549 SER CB HB2 sing N N 550 SER CB HB3 sing N N 551 SER OG HG sing N N 552 SER OXT HXT sing N N 553 THR N CA sing N N 554 THR N H sing N N 555 THR N H2 sing N N 556 THR CA C sing N N 557 THR CA CB sing N N 558 THR CA HA sing N N 559 THR C O doub N N 560 THR C OXT sing N N 561 THR CB OG1 sing N N 562 THR CB CG2 sing N N 563 THR CB HB sing N N 564 THR OG1 HG1 sing N N 565 THR CG2 HG21 sing N N 566 THR CG2 HG22 sing N N 567 THR CG2 HG23 sing N N 568 THR OXT HXT sing N N 569 TRP N CA sing N N 570 TRP N H sing N N 571 TRP N H2 sing N N 572 TRP CA C sing N N 573 TRP CA CB sing N N 574 TRP CA HA sing N N 575 TRP C O doub N N 576 TRP C OXT sing N N 577 TRP CB CG sing N N 578 TRP CB HB2 sing N N 579 TRP CB HB3 sing N N 580 TRP CG CD1 doub Y N 581 TRP CG CD2 sing Y N 582 TRP CD1 NE1 sing Y N 583 TRP CD1 HD1 sing N N 584 TRP CD2 CE2 doub Y N 585 TRP CD2 CE3 sing Y N 586 TRP NE1 CE2 sing Y N 587 TRP NE1 HE1 sing N N 588 TRP CE2 CZ2 sing Y N 589 TRP CE3 CZ3 doub Y N 590 TRP CE3 HE3 sing N N 591 TRP CZ2 CH2 doub Y N 592 TRP CZ2 HZ2 sing N N 593 TRP CZ3 CH2 sing Y N 594 TRP CZ3 HZ3 sing N N 595 TRP CH2 HH2 sing N N 596 TRP OXT HXT sing N N 597 TYR N CA sing N N 598 TYR N H sing N N 599 TYR N H2 sing N N 600 TYR CA C sing N N 601 TYR CA CB sing N N 602 TYR CA HA sing N N 603 TYR C O doub N N 604 TYR C OXT sing N N 605 TYR CB CG sing N N 606 TYR CB HB2 sing N N 607 TYR CB HB3 sing N N 608 TYR CG CD1 doub Y N 609 TYR CG CD2 sing Y N 610 TYR CD1 CE1 sing Y N 611 TYR CD1 HD1 sing N N 612 TYR CD2 CE2 doub Y N 613 TYR CD2 HD2 sing N N 614 TYR CE1 CZ doub Y N 615 TYR CE1 HE1 sing N N 616 TYR CE2 CZ sing Y N 617 TYR CE2 HE2 sing N N 618 TYR CZ OH sing N N 619 TYR OH HH sing N N 620 TYR OXT HXT sing N N 621 VAL N CA sing N N 622 VAL N H sing N N 623 VAL N H2 sing N N 624 VAL CA C sing N N 625 VAL CA CB sing N N 626 VAL CA HA sing N N 627 VAL C O doub N N 628 VAL C OXT sing N N 629 VAL CB CG1 sing N N 630 VAL CB CG2 sing N N 631 VAL CB HB sing N N 632 VAL CG1 HG11 sing N N 633 VAL CG1 HG12 sing N N 634 VAL CG1 HG13 sing N N 635 VAL CG2 HG21 sing N N 636 VAL CG2 HG22 sing N N 637 VAL CG2 HG23 sing N N 638 VAL OXT HXT sing N N 639 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1MQ2 'double helix' 1MQ2 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 C DG 5 1_555 -0.864 0.067 0.498 -5.166 -5.074 4.946 1 T_DC1:DG5_D T 1 ? D 5 ? 19 1 1 A DC 2 1_555 C DG 4 1_555 0.927 -0.336 0.505 -10.660 3.367 3.805 2 T_DC2:DG4_D T 2 ? D 4 ? 19 1 1 A DG 3 1_555 C DC 3 1_555 0.289 -0.122 0.260 5.686 -9.993 -8.952 3 T_DG3:DC3_D T 3 ? D 3 ? 19 1 1 A DA 4 1_555 C DT 2 1_555 -0.459 0.141 0.370 4.676 -1.357 -5.076 4 T_DA4:DT2_D T 4 ? D 2 ? 20 1 1 A DC 5 1_555 C DG 1 1_555 0.110 -0.013 -0.032 13.140 -6.136 -0.603 5 T_DC5:DG1_D T 5 ? D 1 ? 19 1 1 A DT 7 1_555 B 2DA 10 1_555 0.913 -0.546 -0.320 -22.790 10.305 -6.840 6 T_DT7:2DA10_P T 7 ? P 10 ? 20 1 1 A DC 8 1_555 B DG 9 1_555 0.774 -0.398 -0.011 -9.210 -1.123 -3.853 7 T_DC8:DG9_P T 8 ? P 9 ? 19 1 1 A DG 9 1_555 B DC 8 1_555 0.175 -0.012 0.052 3.408 -1.709 -9.288 8 T_DG9:DC8_P T 9 ? P 8 ? 19 1 1 A DC 10 1_555 B DG 7 1_555 0.196 0.204 0.635 -0.719 -6.654 -0.863 9 T_DC10:DG7_P T 10 ? P 7 ? 19 1 1 A DA 11 1_555 B DT 6 1_555 0.321 0.415 0.566 -0.594 -9.596 2.425 10 T_DA11:DT6_P T 11 ? P 6 ? ? ? 1 A DT 12 1_555 B DA 5 1_555 -0.405 0.216 0.093 0.717 -15.094 0.831 11 T_DT12:DA5_P T 12 ? P 5 ? 20 1 1 A DC 13 1_555 B DG 4 1_555 0.220 -0.279 0.265 -4.921 -8.325 -0.006 12 T_DC13:DG4_P T 13 ? P 4 ? 19 1 1 A DA 14 1_555 B DT 3 1_555 0.782 -0.261 0.139 2.516 -8.704 -0.395 13 T_DA14:DT3_P T 14 ? P 3 ? 20 1 1 A DG 15 1_555 B DC 2 1_555 0.438 -0.120 -0.456 0.053 -6.518 -4.155 14 T_DG15:DC2_P T 15 ? P 2 ? 19 1 1 A DC 16 1_555 B DG 1 1_555 1.445 -0.324 0.032 1.830 -7.881 9.677 15 T_DC16:DG1_P T 16 ? P 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 C DG 5 1_555 A DC 2 1_555 C DG 4 1_555 0.808 0.319 3.570 0.064 3.664 42.324 0.032 -1.108 3.586 5.063 -0.089 42.475 1 TT_DC1DC2:DG4DG5_DD T 1 ? D 5 ? T 2 ? D 4 ? 1 A DC 2 1_555 C DG 4 1_555 A DG 3 1_555 C DC 3 1_555 -1.471 0.580 2.965 -3.115 -3.291 31.284 1.626 2.171 3.018 -6.062 5.738 31.602 2 TT_DC2DG3:DC3DG4_DD T 2 ? D 4 ? T 3 ? D 3 ? 1 A DG 3 1_555 C DC 3 1_555 A DA 4 1_555 C DT 2 1_555 -0.161 -0.560 3.318 -3.387 -2.812 33.266 -0.498 -0.291 3.352 -4.885 5.884 33.548 3 TT_DG3DA4:DT2DC3_DD T 3 ? D 3 ? T 4 ? D 2 ? 1 A DA 4 1_555 C DT 2 1_555 A DC 5 1_555 C DG 1 1_555 0.605 -0.377 3.151 6.036 -2.500 34.304 -0.256 -0.110 3.226 -4.192 -10.120 34.902 4 TT_DA4DC5:DG1DT2_DD T 4 ? D 2 ? T 5 ? D 1 ? 1 A DT 7 1_555 B 2DA 10 1_555 A DC 8 1_555 B DG 9 1_555 0.551 0.489 3.399 -2.612 5.752 22.949 -0.797 -2.238 3.338 14.116 6.411 23.792 5 TT_DT7DC8:DG92DA10_PP T 7 ? P 10 ? T 8 ? P 9 ? 1 A DC 8 1_555 B DG 9 1_555 A DG 9 1_555 B DC 8 1_555 -1.101 0.641 3.177 -5.356 6.907 33.038 -0.022 1.011 3.371 11.889 9.218 34.143 6 TT_DC8DG9:DC8DG9_PP T 8 ? P 9 ? T 9 ? P 8 ? 1 A DG 9 1_555 B DC 8 1_555 A DC 10 1_555 B DG 7 1_555 0.210 -0.867 3.359 -4.903 3.489 30.575 -2.285 -1.334 3.172 6.536 9.186 31.147 7 TT_DG9DC10:DG7DC8_PP T 9 ? P 8 ? T 10 ? P 7 ? 1 A DC 10 1_555 B DG 7 1_555 A DA 11 1_555 B DT 6 1_555 -0.086 -0.193 3.198 0.856 1.310 39.967 -0.429 0.221 3.188 1.916 -1.251 39.997 8 TT_DC10DA11:DT6DG7_PP T 10 ? P 7 ? T 11 ? P 6 ? 1 A DA 11 1_555 B DT 6 1_555 A DT 12 1_555 B DA 5 1_555 -0.102 -0.828 3.128 3.313 -0.921 30.411 -1.395 0.822 3.123 -1.749 -6.289 30.600 9 TT_DA11DT12:DA5DT6_PP T 11 ? P 6 ? T 12 ? P 5 ? 1 A DT 12 1_555 B DA 5 1_555 A DC 13 1_555 B DG 4 1_555 0.460 -0.347 3.484 -0.773 -1.806 40.973 -0.285 -0.746 3.487 -2.578 1.103 41.018 10 TT_DT12DC13:DG4DA5_PP T 12 ? P 5 ? T 13 ? P 4 ? 1 A DC 13 1_555 B DG 4 1_555 A DA 14 1_555 B DT 3 1_555 -0.531 -0.125 3.109 0.682 2.510 38.654 -0.480 0.880 3.086 3.787 -1.029 38.738 11 TT_DC13DA14:DT3DG4_PP T 13 ? P 4 ? T 14 ? P 3 ? 1 A DA 14 1_555 B DT 3 1_555 A DG 15 1_555 B DC 2 1_555 0.161 -0.329 3.496 4.378 -1.851 29.415 -0.225 0.670 3.497 -3.615 -8.552 29.789 12 TT_DA14DG15:DC2DT3_PP T 14 ? P 3 ? T 15 ? P 2 ? 1 A DG 15 1_555 B DC 2 1_555 A DC 16 1_555 B DG 1 1_555 1.068 -0.107 3.240 -2.755 7.535 40.373 -0.951 -1.812 3.096 10.788 3.945 41.129 13 TT_DG15DC16:DG1DC2_PP T 15 ? P 2 ? T 16 ? P 1 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1MQ3 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 1MQ2 _atom_sites.fract_transf_matrix[1][1] 0.018116 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005229 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012346 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018720 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O P S # loop_