HEADER SIGNALING PROTEIN 17-SEP-02 1MR3 TITLE SACCHAROMYCES CEREVISIAE ADP-RIBOSYLATION FACTOR 2 (SCARF2) COMPLEXED TITLE 2 WITH GDP-3'P AT 1.6A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADP-RIBOSYLATION FACTOR 2; COMPND 3 CHAIN: F; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: ARF2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET3C KEYWDS GTP-BINDING, GDP-3'PHOSPHATE, SMALL GTPASE, SIGNAL TRANSDUCTION, KEYWDS 2 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.-C.AMOR,J.R.HORTON,X.ZHU,Y.WANG,C.SULLARDS,D.RINGE,X.CHENG,R.A.KAHN REVDAT 5 14-FEB-24 1MR3 1 REMARK LINK REVDAT 4 11-OCT-17 1MR3 1 REMARK REVDAT 3 13-JUL-11 1MR3 1 VERSN REVDAT 2 24-FEB-09 1MR3 1 VERSN REVDAT 1 20-NOV-02 1MR3 0 JRNL AUTH J.C.AMOR,J.R.HORTON,X.ZHU,Y.WANG,C.SULLARDS,D.RINGE,X.CHENG, JRNL AUTH 2 R.A.KAHN JRNL TITL STRUCTURES OF YEAST ARF2 AND ARL1: DISTINCT ROLES FOR THE N JRNL TITL 2 TERMINUS IN THE STRUCTURE AND FUNCTION OF ARF FAMILY JRNL TITL 3 GTPASES. JRNL REF J.BIOL.CHEM. V. 276 42477 2001 JRNL REFN ISSN 0021-9258 JRNL PMID 11535602 JRNL DOI 10.1074/JBC.M106660200 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 23034 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2274 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.70 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3181 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE : 0.2830 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 371 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.015 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1422 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 107 REMARK 3 SOLVENT ATOMS : 207 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.21000 REMARK 3 B22 (A**2) : -2.35000 REMARK 3 B33 (A**2) : 2.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.19 REMARK 3 ESD FROM SIGMAA (A) : 0.13 REMARK 3 LOW RESOLUTION CUTOFF (A) : 35.0 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.21 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.15 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.740 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 0.670 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.160 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 0.950 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 1.530 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 43.90 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : GDP3P.PAR REMARK 3 PARAMETER FILE 5 : LIGAND.PAR REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : GDP3P.TOP REMARK 3 TOPOLOGY FILE 5 : LIGAND.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1MR3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-SEP-02. REMARK 100 THE DEPOSITION ID IS D_1000017124. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-96 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X12C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00805 REMARK 200 MONOCHROMATOR : NI FILTER REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MAR REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23034 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 30.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 22.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1HUR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 8K, 100MM CACODYLATE, PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 30.91100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.73500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.91100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.73500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET F 1 REMARK 465 GLY F 2 REMARK 465 LEU F 3 REMARK 465 TYR F 4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O1 EDO F 2072 C1 EOH F 2047 3555 0.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER F 6 -76.98 -89.67 REMARK 500 LYS F 7 -127.33 -166.82 REMARK 500 LYS F 59 -115.98 53.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 801 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR F 31 OG1 REMARK 620 2 G3D F 800 O2B 93.7 REMARK 620 3 HOH F2078 O 86.4 172.7 REMARK 620 4 HOH F2079 O 177.4 88.9 91.2 REMARK 620 5 HOH F2080 O 91.2 94.6 92.6 88.0 REMARK 620 6 HOH F2085 O 93.2 85.8 86.9 87.5 175.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG F 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE G3D F 800 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO F 2065 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO F 2067 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO F 2069 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO F 2071 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO F 2072 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO F 2073 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO F 2074 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO F 2075 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO F 2076 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO F 2077 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL F 950 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL F 954 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH F 2046 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH F 2047 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH F 2048 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH F 2049 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDO F 2008 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDO F 2009 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1HUR RELATED DB: PDB REMARK 900 HOMO SAPIENS ADP-RIBOSYLATION FACTOR 1 COMPLEXED WITH GDP AT 2.0A REMARK 900 RESOLUTION DBREF 1MR3 F 1 181 UNP P19146 ARF2_YEAST 0 180 SEQRES 1 F 181 MET GLY LEU TYR ALA SER LYS LEU PHE SER ASN LEU PHE SEQRES 2 F 181 GLY ASN LYS GLU MET ARG ILE LEU MET VAL GLY LEU ASP SEQRES 3 F 181 GLY ALA GLY LYS THR THR VAL LEU TYR LYS LEU LYS LEU SEQRES 4 F 181 GLY GLU VAL ILE THR THR ILE PRO THR ILE GLY PHE ASN SEQRES 5 F 181 VAL GLU THR VAL GLN TYR LYS ASN ILE SER PHE THR VAL SEQRES 6 F 181 TRP ASP VAL GLY GLY GLN ASP ARG ILE ARG SER LEU TRP SEQRES 7 F 181 ARG HIS TYR TYR ARG ASN THR GLU GLY VAL ILE PHE VAL SEQRES 8 F 181 ILE ASP SER ASN ASP ARG SER ARG ILE GLY GLU ALA ARG SEQRES 9 F 181 GLU VAL MET GLN ARG MET LEU ASN GLU ASP GLU LEU ARG SEQRES 10 F 181 ASN ALA VAL TRP LEU VAL PHE ALA ASN LYS GLN ASP LEU SEQRES 11 F 181 PRO GLU ALA MET SER ALA ALA GLU ILE THR GLU LYS LEU SEQRES 12 F 181 GLY LEU HIS SER ILE ARG ASN ARG PRO TRP PHE ILE GLN SEQRES 13 F 181 SER THR CYS ALA THR SER GLY GLU GLY LEU TYR GLU GLY SEQRES 14 F 181 LEU GLU TRP LEU SER ASN ASN LEU LYS ASN GLN SER HET MG F 801 1 HET G3D F 800 32 HET EDO F2065 4 HET EDO F2067 4 HET EDO F2069 4 HET EDO F2071 4 HET EDO F2072 4 HET EDO F2073 4 HET EDO F2074 4 HET EDO F2075 4 HET EDO F2076 4 HET EDO F2077 4 HET GOL F 950 6 HET GOL F 954 6 HET EOH F2046 3 HET EOH F2047 3 HET EOH F2048 3 HET EOH F2049 3 HET PDO F2008 5 HET PDO F2009 5 HETNAM MG MAGNESIUM ION HETNAM G3D GUANOSINE-3'-MONOPHOSPHATE-5'-DIPHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETNAM EOH ETHANOL HETNAM PDO 1,3-PROPANDIOL HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 MG MG 2+ FORMUL 3 G3D C10 H16 N5 O14 P3 FORMUL 4 EDO 10(C2 H6 O2) FORMUL 14 GOL 2(C3 H8 O3) FORMUL 16 EOH 4(C2 H6 O) FORMUL 20 PDO 2(C3 H8 O2) FORMUL 22 HOH *207(H2 O) HELIX 1 1 PHE F 9 GLY F 14 1 6 HELIX 2 2 GLY F 29 LYS F 38 1 10 HELIX 3 3 ARG F 75 ASN F 84 1 10 HELIX 4 4 ASP F 96 SER F 98 5 3 HELIX 5 5 ARG F 99 ASN F 112 1 14 HELIX 6 6 GLU F 113 ARG F 117 5 5 HELIX 7 7 SER F 135 GLY F 144 1 10 HELIX 8 8 LEU F 145 ILE F 148 5 4 HELIX 9 9 GLY F 165 LEU F 177 1 13 SHEET 1 A 7 ILE F 43 THR F 48 0 SHEET 2 A 7 PHE F 51 TYR F 58 -1 O VAL F 53 N THR F 45 SHEET 3 A 7 ILE F 61 VAL F 68 -1 O ILE F 61 N TYR F 58 SHEET 4 A 7 MET F 18 LEU F 25 1 N ILE F 20 O SER F 62 SHEET 5 A 7 GLY F 87 ASP F 93 1 O ILE F 89 N LEU F 21 SHEET 6 A 7 VAL F 120 ASN F 126 1 O LEU F 122 N VAL F 88 SHEET 7 A 7 TRP F 153 SER F 157 1 O PHE F 154 N VAL F 123 LINK C2 EOH F2047 O1 EDO F2072 1555 3545 1.68 LINK C1 EOH F2047 C1 EDO F2072 3555 1555 1.10 LINK C2 EOH F2047 C1 EDO F2072 3555 1555 1.96 LINK O EOH F2047 O1 EDO F2072 3555 1555 2.01 LINK C2 EOH F2047 O1 EDO F2072 3555 1555 1.68 LINK O EOH F2047 C2 EDO F2072 3555 1555 1.78 LINK C1 EOH F2047 C2 EDO F2072 3555 1555 1.89 LINK C2 EOH F2047 C2 EDO F2072 3555 1555 1.59 LINK C1 EOH F2047 C1 EDO F2072 1555 3545 1.10 LINK C1 EOH F2047 C2 EDO F2072 1555 3545 1.89 LINK C2 EOH F2047 C1 EDO F2072 1555 3545 1.96 LINK C2 EOH F2047 C2 EDO F2072 1555 3545 1.59 LINK O EOH F2047 O1 EDO F2072 1555 3545 2.01 LINK O EOH F2047 C1 EDO F2072 1555 3545 1.21 LINK O EOH F2047 C2 EDO F2072 1555 3545 1.78 LINK O EOH F2047 C1 EDO F2072 3555 1555 1.21 LINK OG1 THR F 31 MG MG F 801 1555 1555 2.15 LINK O2B G3D F 800 MG MG F 801 1555 1555 2.20 LINK MG MG F 801 O HOH F2078 1555 1555 2.14 LINK MG MG F 801 O HOH F2079 1555 1555 2.27 LINK MG MG F 801 O HOH F2080 1555 1555 2.18 LINK MG MG F 801 O HOH F2085 1555 1555 2.21 SITE 1 AC1 6 THR F 31 G3D F 800 HOH F2078 HOH F2079 SITE 2 AC1 6 HOH F2080 HOH F2085 SITE 1 AC2 26 ASP F 26 GLY F 27 ALA F 28 GLY F 29 SITE 2 AC2 26 LYS F 30 THR F 31 THR F 32 ASN F 126 SITE 3 AC2 26 LYS F 127 ASP F 129 CYS F 159 ALA F 160 SITE 4 AC2 26 THR F 161 MG F 801 HOH F2079 HOH F2085 SITE 5 AC2 26 HOH F2090 HOH F2091 HOH F2119 HOH F2139 SITE 6 AC2 26 HOH F2186 HOH F2189 HOH F2191 HOH F2193 SITE 7 AC2 26 HOH F2202 HOH F2233 SITE 1 AC3 10 THR F 48 ILE F 49 GLY F 50 PHE F 51 SITE 2 AC3 10 SER F 135 PDO F2009 EOH F2047 EDO F2072 SITE 3 AC3 10 HOH F2098 HOH F2144 SITE 1 AC4 3 PRO F 152 TRP F 153 HOH F2128 SITE 1 AC5 7 LYS F 16 ASP F 93 ASN F 95 LEU F 130 SITE 2 AC5 7 HOH F2110 HOH F2187 HOH F2209 SITE 1 AC6 2 ASN F 112 ASP F 114 SITE 1 AC7 9 THR F 48 ARG F 75 TRP F 78 SER F 135 SITE 2 AC7 9 PDO F2009 EOH F2047 EDO F2065 HOH F2112 SITE 3 AC7 9 HOH F2222 SITE 1 AC8 7 THR F 32 LYS F 36 THR F 161 HOH F2089 SITE 2 AC8 7 HOH F2106 HOH F2189 HOH F2199 SITE 1 AC9 6 THR F 48 ARG F 97 GLU F 138 HOH F2185 SITE 2 AC9 6 HOH F2222 HOH F2260 SITE 1 BC1 8 ILE F 20 LEU F 21 THR F 64 TYR F 81 SITE 2 BC1 8 ASN F 84 THR F 85 HOH F2195 HOH F2284 SITE 1 BC2 3 LYS F 36 LYS F 38 EDO F2077 SITE 1 BC3 4 SER F 162 GLY F 163 GLU F 164 EDO F2076 SITE 1 BC4 5 ARG F 83 GLU F 115 ARG F 117 ASN F 118 SITE 2 BC4 5 HOH F2162 SITE 1 BC5 6 GLY F 50 ASN F 52 TRP F 66 ASP F 67 SITE 2 BC5 6 PDO F2008 PDO F2009 SITE 1 BC6 7 LEU F 25 ASP F 93 ASP F 96 ARG F 99 SITE 2 BC6 7 ILE F 100 ALA F 103 HOH F2094 SITE 1 BC7 9 THR F 48 PHE F 51 ARG F 75 TRP F 78 SITE 2 BC7 9 SER F 135 EDO F2065 EDO F2072 HOH F2112 SITE 3 BC7 9 HOH F2222 SITE 1 BC8 4 GLN F 71 GLN F 156 GLU F 168 HOH F2188 SITE 1 BC9 2 ARG F 73 HOH F2190 SITE 1 CC1 8 ASN F 52 GLU F 54 VAL F 65 TRP F 66 SITE 2 CC1 8 ASP F 67 GOL F 954 HOH F2078 HOH F2080 SITE 1 CC2 7 ASP F 72 ARG F 73 TRP F 78 GOL F 954 SITE 2 CC2 7 EDO F2065 EDO F2072 HOH F2178 CRYST1 61.822 69.470 40.861 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016175 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014395 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024473 0.00000