data_1MT4 # _entry.id 1MT4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1MT4 pdb_00001mt4 10.2210/pdb1mt4/pdb RCSB RCSB017162 ? ? WWPDB D_1000017162 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1MT4 _pdbx_database_status.recvd_initial_deposition_date 2002-09-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lebars, I.' 1 'Yoshizawa, S.' 2 'Stenholm, A.R.' 3 'Guittet, E.' 4 'Douthwaite, S.' 5 'Fourmy, D.' 6 # _citation.id primary _citation.title 'Structure of 23S rRNA hairpin 35 and its interaction with the tylosin-resistance methyltransferase RlmAII' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 22 _citation.page_first 183 _citation.page_last 192 _citation.year 2003 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12514124 _citation.pdbx_database_id_DOI 10.1093/emboj/cdg022 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lebars, I.' 1 ? primary 'Yoshizawa, S.' 2 ? primary 'Stenholm, A.R.' 3 ? primary 'Guittet, E.' 4 ? primary 'Douthwaite, S.' 5 ? primary 'Fourmy, D.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description '23S ribosomal Hairpin 35' _entity.formula_weight 7732.663 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'Hairpin 35 from E. coli' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGCGUAACGUUGAAAAGUUACGCC _entity_poly.pdbx_seq_one_letter_code_can GGCGUAACGUUGAAAAGUUACGCC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 C n 1 4 G n 1 5 U n 1 6 A n 1 7 A n 1 8 C n 1 9 G n 1 10 U n 1 11 U n 1 12 G n 1 13 A n 1 14 A n 1 15 A n 1 16 A n 1 17 G n 1 18 U n 1 19 U n 1 20 A n 1 21 C n 1 22 G n 1 23 C n 1 24 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'SYNTHETIC-T7 RNA TRANSCRIPT; sequence from Escherichia coli' # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1MT4 _struct_ref.pdbx_db_accession 1MT4 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1MT4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 24 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1MT4 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 24 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 HSQC 2 2 2 'TOCSY, 3D NOESY-HMQC, 3D HCCH- TOCSY, HP COSY, HSQC, 3D HCP' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 6.4 _pdbx_nmr_exptl_sample_conditions.ionic_strength '10mM phosphate' _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 '1mM RNA U-15N; 10mM phosphate buffer; 90% H2O, 10% D2O' '90% H2O/10% D2O' 2 '1mM RNA 15N-13C; 10mM phosphate buffer; 100% D2O' '100% D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.field_strength 1 ? Bruker DRX 800 2 ? Bruker DRX 600 # _pdbx_nmr_refine.entry_id 1MT4 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1MT4 _pdbx_nmr_ensemble.conformers_calculated_total_number 115 _pdbx_nmr_ensemble.conformers_submitted_total_number 17 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1MT4 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal XwinNMR ? processing ? 1 AURELIA ? processing ? 2 Discover ? 'structure solution' ? 3 Discover ? refinement ? 4 # _exptl.entry_id 1MT4 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1MT4 _struct.title 'Structure of 23S ribosomal RNA hairpin 35' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1MT4 _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'RNA hairpin, ribosomal RNA, U-turn, RNA' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 24 N3 ? ? A G 1 A C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 24 O2 ? ? A G 1 A C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 24 N4 ? ? A G 1 A C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 23 N3 ? ? A G 2 A C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 23 O2 ? ? A G 2 A C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 23 N4 ? ? A G 2 A C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 22 N1 ? ? A C 3 A G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 22 O6 ? ? A C 3 A G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 22 N2 ? ? A C 3 A G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 O6 ? ? ? 1_555 A A 20 N6 ? ? A G 4 A A 20 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog11 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 21 N3 ? ? A G 4 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 21 O2 ? ? A G 4 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 21 N4 ? ? A G 4 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A U 5 N3 ? ? ? 1_555 A A 20 N1 ? ? A U 5 A A 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A U 5 O4 ? ? ? 1_555 A A 20 N6 ? ? A U 5 A A 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A A 6 N1 ? ? ? 1_555 A U 19 N3 ? ? A A 6 A U 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A A 6 N6 ? ? ? 1_555 A U 19 O4 ? ? A A 6 A U 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A A 7 N1 ? ? ? 1_555 A U 18 N3 ? ? A A 7 A U 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A A 7 N6 ? ? ? 1_555 A U 18 O4 ? ? A A 7 A U 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 8 N3 ? ? ? 1_555 A G 17 N1 ? ? A C 8 A G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 8 N4 ? ? ? 1_555 A G 17 O6 ? ? A C 8 A G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 8 O2 ? ? ? 1_555 A G 17 N2 ? ? A C 8 A G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 9 N2 ? ? ? 1_555 A A 16 N7 ? ? A G 9 A A 16 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog24 hydrog ? ? A G 9 N3 ? ? ? 1_555 A A 16 N6 ? ? A G 9 A A 16 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog25 hydrog ? ? A U 10 N3 ? ? ? 1_555 A A 15 N7 ? ? A U 10 A A 15 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog26 hydrog ? ? A U 10 O2 ? ? ? 1_555 A A 15 N6 ? ? A U 10 A A 15 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1MT4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1MT4 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 C 3 3 3 C C A . n A 1 4 G 4 4 4 G G A . n A 1 5 U 5 5 5 U U A . n A 1 6 A 6 6 6 A A A . n A 1 7 A 7 7 7 A A A . n A 1 8 C 8 8 8 C C A . n A 1 9 G 9 9 9 G G A . n A 1 10 U 10 10 10 U U A . n A 1 11 U 11 11 11 U U A . n A 1 12 G 12 12 12 G G A . n A 1 13 A 13 13 13 A A A . n A 1 14 A 14 14 14 A A A . n A 1 15 A 15 15 15 A A A . n A 1 16 A 16 16 16 A A A . n A 1 17 G 17 17 17 G G A . n A 1 18 U 18 18 18 U U A . n A 1 19 U 19 19 19 U U A . n A 1 20 A 20 20 20 A A A . n A 1 21 C 21 21 21 C C A . n A 1 22 G 22 22 22 G G A . n A 1 23 C 23 23 23 C C A . n A 1 24 C 24 24 24 C C A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-01-14 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 112.94 108.50 4.44 0.70 N 2 1 "O4'" A U 5 ? ? "C1'" A U 5 ? ? N1 A U 5 ? ? 113.23 108.50 4.73 0.70 N 3 1 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 112.75 108.50 4.25 0.70 N 4 1 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 112.72 108.50 4.22 0.70 N 5 1 "O4'" A A 14 ? ? "C1'" A A 14 ? ? N9 A A 14 ? ? 114.74 108.50 6.24 0.70 N 6 1 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 114.78 108.50 6.28 0.70 N 7 1 "O4'" A U 18 ? ? "C1'" A U 18 ? ? N1 A U 18 ? ? 112.98 108.50 4.48 0.70 N 8 1 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 112.74 108.50 4.24 0.70 N 9 1 "O4'" A C 23 ? ? "C1'" A C 23 ? ? N1 A C 23 ? ? 113.24 108.50 4.74 0.70 N 10 2 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 113.18 108.50 4.68 0.70 N 11 2 "O4'" A A 14 ? ? "C1'" A A 14 ? ? N9 A A 14 ? ? 115.66 108.50 7.16 0.70 N 12 2 "O4'" A A 15 ? ? "C1'" A A 15 ? ? N9 A A 15 ? ? 114.02 108.50 5.52 0.70 N 13 2 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 113.57 108.50 5.07 0.70 N 14 2 "O4'" A U 18 ? ? "C1'" A U 18 ? ? N1 A U 18 ? ? 113.84 108.50 5.34 0.70 N 15 2 "O4'" A U 19 ? ? "C1'" A U 19 ? ? N1 A U 19 ? ? 112.71 108.50 4.21 0.70 N 16 2 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 112.85 108.50 4.35 0.70 N 17 2 "O4'" A C 23 ? ? "C1'" A C 23 ? ? N1 A C 23 ? ? 113.25 108.50 4.75 0.70 N 18 3 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 112.88 108.50 4.38 0.70 N 19 3 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 113.32 108.50 4.82 0.70 N 20 3 "O4'" A U 10 ? ? "C1'" A U 10 ? ? N1 A U 10 ? ? 113.36 108.50 4.86 0.70 N 21 3 "O4'" A A 14 ? ? "C1'" A A 14 ? ? N9 A A 14 ? ? 113.13 108.50 4.63 0.70 N 22 3 "O4'" A A 15 ? ? "C1'" A A 15 ? ? N9 A A 15 ? ? 113.87 108.50 5.37 0.70 N 23 3 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 115.31 108.50 6.81 0.70 N 24 3 "O4'" A U 18 ? ? "C1'" A U 18 ? ? N1 A U 18 ? ? 113.26 108.50 4.76 0.70 N 25 3 "O4'" A U 19 ? ? "C1'" A U 19 ? ? N1 A U 19 ? ? 113.38 108.50 4.88 0.70 N 26 3 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 112.93 108.50 4.43 0.70 N 27 3 "O4'" A C 23 ? ? "C1'" A C 23 ? ? N1 A C 23 ? ? 113.14 108.50 4.64 0.70 N 28 4 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 112.80 108.50 4.30 0.70 N 29 4 "O4'" A U 5 ? ? "C1'" A U 5 ? ? N1 A U 5 ? ? 112.76 108.50 4.26 0.70 N 30 4 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 112.95 108.50 4.45 0.70 N 31 4 "O4'" A A 13 ? ? "C1'" A A 13 ? ? N9 A A 13 ? ? 113.45 108.50 4.95 0.70 N 32 4 "O4'" A A 15 ? ? "C1'" A A 15 ? ? N9 A A 15 ? ? 113.68 108.50 5.18 0.70 N 33 4 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 115.67 108.50 7.17 0.70 N 34 4 "O4'" A U 18 ? ? "C1'" A U 18 ? ? N1 A U 18 ? ? 113.20 108.50 4.70 0.70 N 35 4 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 112.77 108.50 4.27 0.70 N 36 4 "O4'" A C 23 ? ? "C1'" A C 23 ? ? N1 A C 23 ? ? 113.26 108.50 4.76 0.70 N 37 5 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.14 108.50 4.64 0.70 N 38 5 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 113.07 108.50 4.57 0.70 N 39 5 "O4'" A G 12 ? ? "C1'" A G 12 ? ? N9 A G 12 ? ? 113.60 108.50 5.10 0.70 N 40 5 "O4'" A A 13 ? ? "C1'" A A 13 ? ? N9 A A 13 ? ? 113.34 108.50 4.84 0.70 N 41 5 "O4'" A A 14 ? ? "C1'" A A 14 ? ? N9 A A 14 ? ? 114.26 108.50 5.76 0.70 N 42 5 "O4'" A A 15 ? ? "C1'" A A 15 ? ? N9 A A 15 ? ? 114.00 108.50 5.50 0.70 N 43 5 "O4'" A U 18 ? ? "C1'" A U 18 ? ? N1 A U 18 ? ? 113.24 108.50 4.74 0.70 N 44 5 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 112.78 108.50 4.28 0.70 N 45 5 "O4'" A C 23 ? ? "C1'" A C 23 ? ? N1 A C 23 ? ? 113.09 108.50 4.59 0.70 N 46 6 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 112.79 108.50 4.29 0.70 N 47 6 "O4'" A U 5 ? ? "C1'" A U 5 ? ? N1 A U 5 ? ? 113.74 108.50 5.24 0.70 N 48 6 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 113.16 108.50 4.66 0.70 N 49 6 "O4'" A G 12 ? ? "C1'" A G 12 ? ? N9 A G 12 ? ? 113.53 108.50 5.03 0.70 N 50 6 "O4'" A A 15 ? ? "C1'" A A 15 ? ? N9 A A 15 ? ? 115.50 108.50 7.00 0.70 N 51 6 "O4'" A U 18 ? ? "C1'" A U 18 ? ? N1 A U 18 ? ? 113.51 108.50 5.01 0.70 N 52 6 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 112.77 108.50 4.27 0.70 N 53 6 "O4'" A C 23 ? ? "C1'" A C 23 ? ? N1 A C 23 ? ? 113.40 108.50 4.90 0.70 N 54 7 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.07 108.50 4.57 0.70 N 55 7 "O4'" A A 7 ? ? "C1'" A A 7 ? ? N9 A A 7 ? ? 113.38 108.50 4.88 0.70 N 56 7 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 113.98 108.50 5.48 0.70 N 57 7 "O4'" A U 10 ? ? "C1'" A U 10 ? ? N1 A U 10 ? ? 112.90 108.50 4.40 0.70 N 58 7 "O4'" A G 12 ? ? "C1'" A G 12 ? ? N9 A G 12 ? ? 113.30 108.50 4.80 0.70 N 59 7 "C3'" A G 12 ? ? "O3'" A G 12 ? ? P A A 13 ? ? 127.49 119.70 7.79 1.20 Y 60 7 "O4'" A A 13 ? ? "C1'" A A 13 ? ? N9 A A 13 ? ? 114.08 108.50 5.58 0.70 N 61 7 "O4'" A A 14 ? ? "C1'" A A 14 ? ? N9 A A 14 ? ? 113.82 108.50 5.32 0.70 N 62 7 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 116.11 108.50 7.61 0.70 N 63 7 "O4'" A U 18 ? ? "C1'" A U 18 ? ? N1 A U 18 ? ? 114.02 108.50 5.52 0.70 N 64 7 "O4'" A U 19 ? ? "C1'" A U 19 ? ? N1 A U 19 ? ? 113.75 108.50 5.25 0.70 N 65 7 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.11 108.50 4.61 0.70 N 66 7 "O4'" A C 23 ? ? "C1'" A C 23 ? ? N1 A C 23 ? ? 113.12 108.50 4.62 0.70 N 67 8 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 112.86 108.50 4.36 0.70 N 68 8 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 114.06 108.50 5.56 0.70 N 69 8 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 114.12 108.50 5.62 0.70 N 70 8 "O4'" A G 12 ? ? "C1'" A G 12 ? ? N9 A G 12 ? ? 113.79 108.50 5.29 0.70 N 71 8 "O4'" A A 14 ? ? "C1'" A A 14 ? ? N9 A A 14 ? ? 113.37 108.50 4.87 0.70 N 72 8 "O4'" A A 15 ? ? "C1'" A A 15 ? ? N9 A A 15 ? ? 113.59 108.50 5.09 0.70 N 73 8 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 115.82 108.50 7.32 0.70 N 74 8 "O4'" A U 18 ? ? "C1'" A U 18 ? ? N1 A U 18 ? ? 113.10 108.50 4.60 0.70 N 75 8 "O4'" A U 19 ? ? "C1'" A U 19 ? ? N1 A U 19 ? ? 112.75 108.50 4.25 0.70 N 76 8 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 112.78 108.50 4.28 0.70 N 77 8 "O4'" A C 23 ? ? "C1'" A C 23 ? ? N1 A C 23 ? ? 113.07 108.50 4.57 0.70 N 78 9 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.08 108.50 4.58 0.70 N 79 9 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 112.73 108.50 4.23 0.70 N 80 9 "O4'" A U 10 ? ? "C1'" A U 10 ? ? N1 A U 10 ? ? 112.74 108.50 4.24 0.70 N 81 9 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 113.03 108.50 4.53 0.70 N 82 9 "O4'" A A 14 ? ? "C1'" A A 14 ? ? N9 A A 14 ? ? 113.71 108.50 5.21 0.70 N 83 9 "O4'" A A 15 ? ? "C1'" A A 15 ? ? N9 A A 15 ? ? 113.56 108.50 5.06 0.70 N 84 9 "O4'" A U 19 ? ? "C1'" A U 19 ? ? N1 A U 19 ? ? 113.06 108.50 4.56 0.70 N 85 9 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 112.87 108.50 4.37 0.70 N 86 9 "O4'" A C 23 ? ? "C1'" A C 23 ? ? N1 A C 23 ? ? 113.11 108.50 4.61 0.70 N 87 10 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.12 108.50 4.62 0.70 N 88 10 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 113.83 108.50 5.33 0.70 N 89 10 "O4'" A U 10 ? ? "C1'" A U 10 ? ? N1 A U 10 ? ? 114.19 108.50 5.69 0.70 N 90 10 "O4'" A G 12 ? ? "C1'" A G 12 ? ? N9 A G 12 ? ? 113.15 108.50 4.65 0.70 N 91 10 "O4'" A A 13 ? ? "C1'" A A 13 ? ? N9 A A 13 ? ? 112.92 108.50 4.42 0.70 N 92 10 "O4'" A A 14 ? ? "C1'" A A 14 ? ? N9 A A 14 ? ? 113.23 108.50 4.73 0.70 N 93 10 "O4'" A A 15 ? ? "C1'" A A 15 ? ? N9 A A 15 ? ? 113.86 108.50 5.36 0.70 N 94 10 "O4'" A U 18 ? ? "C1'" A U 18 ? ? N1 A U 18 ? ? 113.31 108.50 4.81 0.70 N 95 10 "O4'" A U 19 ? ? "C1'" A U 19 ? ? N1 A U 19 ? ? 113.56 108.50 5.06 0.70 N 96 10 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 112.71 108.50 4.21 0.70 N 97 10 "O4'" A C 23 ? ? "C1'" A C 23 ? ? N1 A C 23 ? ? 113.03 108.50 4.53 0.70 N 98 11 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.28 108.50 4.78 0.70 N 99 11 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 113.22 108.50 4.72 0.70 N 100 11 "C3'" A U 10 ? ? "C2'" A U 10 ? ? "C1'" A U 10 ? ? 107.28 101.50 5.78 0.80 N 101 11 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 113.09 108.50 4.59 0.70 N 102 11 "O4'" A G 12 ? ? "C1'" A G 12 ? ? N9 A G 12 ? ? 113.43 108.50 4.93 0.70 N 103 11 "O4'" A A 13 ? ? "C1'" A A 13 ? ? N9 A A 13 ? ? 112.85 108.50 4.35 0.70 N 104 11 "O4'" A A 15 ? ? "C1'" A A 15 ? ? N9 A A 15 ? ? 113.13 108.50 4.63 0.70 N 105 11 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 113.13 108.50 4.63 0.70 N 106 11 "O4'" A U 18 ? ? "C1'" A U 18 ? ? N1 A U 18 ? ? 113.03 108.50 4.53 0.70 N 107 11 "O4'" A U 19 ? ? "C1'" A U 19 ? ? N1 A U 19 ? ? 113.26 108.50 4.76 0.70 N 108 11 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 112.74 108.50 4.24 0.70 N 109 11 "O4'" A C 23 ? ? "C1'" A C 23 ? ? N1 A C 23 ? ? 113.13 108.50 4.63 0.70 N 110 12 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 112.99 108.50 4.49 0.70 N 111 12 "O4'" A U 5 ? ? "C1'" A U 5 ? ? N1 A U 5 ? ? 112.89 108.50 4.39 0.70 N 112 12 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 112.89 108.50 4.39 0.70 N 113 12 "O4'" A G 9 ? ? "C1'" A G 9 ? ? N9 A G 9 ? ? 113.26 108.50 4.76 0.70 N 114 12 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 113.25 108.50 4.75 0.70 N 115 12 "O4'" A A 13 ? ? "C1'" A A 13 ? ? N9 A A 13 ? ? 113.85 108.50 5.35 0.70 N 116 12 "O4'" A A 15 ? ? "C1'" A A 15 ? ? N9 A A 15 ? ? 115.15 108.50 6.65 0.70 N 117 12 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 115.58 108.50 7.08 0.70 N 118 12 "O4'" A U 18 ? ? "C1'" A U 18 ? ? N1 A U 18 ? ? 112.90 108.50 4.40 0.70 N 119 12 "O4'" A U 19 ? ? "C1'" A U 19 ? ? N1 A U 19 ? ? 112.93 108.50 4.43 0.70 N 120 12 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 112.81 108.50 4.31 0.70 N 121 12 "O4'" A C 23 ? ? "C1'" A C 23 ? ? N1 A C 23 ? ? 112.89 108.50 4.39 0.70 N 122 13 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 112.99 108.50 4.49 0.70 N 123 13 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 113.55 108.50 5.05 0.70 N 124 13 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 112.95 108.50 4.45 0.70 N 125 13 "O4'" A G 12 ? ? "C1'" A G 12 ? ? N9 A G 12 ? ? 113.83 108.50 5.33 0.70 N 126 13 "O4'" A A 13 ? ? "C1'" A A 13 ? ? N9 A A 13 ? ? 113.37 108.50 4.87 0.70 N 127 13 "O4'" A A 14 ? ? "C1'" A A 14 ? ? N9 A A 14 ? ? 113.18 108.50 4.68 0.70 N 128 13 "O4'" A A 15 ? ? "C1'" A A 15 ? ? N9 A A 15 ? ? 114.32 108.50 5.82 0.70 N 129 13 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 116.61 108.50 8.11 0.70 N 130 13 "O4'" A U 18 ? ? "C1'" A U 18 ? ? N1 A U 18 ? ? 112.84 108.50 4.34 0.70 N 131 13 "O4'" A U 19 ? ? "C1'" A U 19 ? ? N1 A U 19 ? ? 113.76 108.50 5.26 0.70 N 132 13 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.27 108.50 4.77 0.70 N 133 13 "O4'" A C 23 ? ? "C1'" A C 23 ? ? N1 A C 23 ? ? 113.06 108.50 4.56 0.70 N 134 14 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.22 108.50 4.72 0.70 N 135 14 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 113.09 108.50 4.59 0.70 N 136 14 "O4'" A G 12 ? ? "C1'" A G 12 ? ? N9 A G 12 ? ? 114.15 108.50 5.65 0.70 N 137 14 "O4'" A A 13 ? ? "C1'" A A 13 ? ? N9 A A 13 ? ? 114.66 108.50 6.16 0.70 N 138 14 "O4'" A A 14 ? ? "C1'" A A 14 ? ? N9 A A 14 ? ? 114.71 108.50 6.21 0.70 N 139 14 "O4'" A A 15 ? ? "C1'" A A 15 ? ? N9 A A 15 ? ? 113.10 108.50 4.60 0.70 N 140 14 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 117.51 108.50 9.01 0.70 N 141 14 "O4'" A U 18 ? ? "C1'" A U 18 ? ? N1 A U 18 ? ? 113.07 108.50 4.57 0.70 N 142 14 "O4'" A U 19 ? ? "C1'" A U 19 ? ? N1 A U 19 ? ? 113.10 108.50 4.60 0.70 N 143 14 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 112.81 108.50 4.31 0.70 N 144 14 "O4'" A C 23 ? ? "C1'" A C 23 ? ? N1 A C 23 ? ? 113.32 108.50 4.82 0.70 N 145 15 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.10 108.50 4.60 0.70 N 146 15 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 112.73 108.50 4.23 0.70 N 147 15 "O4'" A G 12 ? ? "C1'" A G 12 ? ? N9 A G 12 ? ? 114.08 108.50 5.58 0.70 N 148 15 "O4'" A A 13 ? ? "C1'" A A 13 ? ? N9 A A 13 ? ? 113.77 108.50 5.27 0.70 N 149 15 "O4'" A A 15 ? ? "C1'" A A 15 ? ? N9 A A 15 ? ? 113.01 108.50 4.51 0.70 N 150 15 "O4'" A U 18 ? ? "C1'" A U 18 ? ? N1 A U 18 ? ? 113.24 108.50 4.74 0.70 N 151 15 "O4'" A C 23 ? ? "C1'" A C 23 ? ? N1 A C 23 ? ? 113.23 108.50 4.73 0.70 N 152 16 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 112.95 108.50 4.45 0.70 N 153 16 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 113.14 108.50 4.64 0.70 N 154 16 "O4'" A G 9 ? ? "C1'" A G 9 ? ? N9 A G 9 ? ? 113.78 108.50 5.28 0.70 N 155 16 "O4'" A U 10 ? ? "C1'" A U 10 ? ? N1 A U 10 ? ? 114.50 108.50 6.00 0.70 N 156 16 "O4'" A G 12 ? ? "C1'" A G 12 ? ? N9 A G 12 ? ? 113.57 108.50 5.07 0.70 N 157 16 "O4'" A A 13 ? ? "C1'" A A 13 ? ? N9 A A 13 ? ? 117.17 108.50 8.67 0.70 N 158 16 "O4'" A A 14 ? ? "C1'" A A 14 ? ? N9 A A 14 ? ? 112.72 108.50 4.22 0.70 N 159 16 "O4'" A A 15 ? ? "C1'" A A 15 ? ? N9 A A 15 ? ? 116.24 108.50 7.74 0.70 N 160 16 "O4'" A U 18 ? ? "C1'" A U 18 ? ? N1 A U 18 ? ? 113.10 108.50 4.60 0.70 N 161 16 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 112.75 108.50 4.25 0.70 N 162 16 "O4'" A C 23 ? ? "C1'" A C 23 ? ? N1 A C 23 ? ? 113.15 108.50 4.65 0.70 N 163 17 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.08 108.50 4.58 0.70 N 164 17 "C3'" A U 10 ? ? "C2'" A U 10 ? ? "C1'" A U 10 ? ? 106.38 101.50 4.88 0.80 N 165 17 "O4'" A A 13 ? ? "C1'" A A 13 ? ? N9 A A 13 ? ? 113.08 108.50 4.58 0.70 N 166 17 "O4'" A A 15 ? ? "C1'" A A 15 ? ? N9 A A 15 ? ? 112.96 108.50 4.46 0.70 N 167 17 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 112.80 108.50 4.30 0.70 N 168 17 "O4'" A C 23 ? ? "C1'" A C 23 ? ? N1 A C 23 ? ? 113.20 108.50 4.70 0.70 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 A A 6 ? ? 0.080 'SIDE CHAIN' 2 1 G A 9 ? ? 0.076 'SIDE CHAIN' 3 1 U A 10 ? ? 0.074 'SIDE CHAIN' 4 1 A A 15 ? ? 0.071 'SIDE CHAIN' 5 1 A A 20 ? ? 0.053 'SIDE CHAIN' 6 1 G A 22 ? ? 0.074 'SIDE CHAIN' 7 2 U A 10 ? ? 0.070 'SIDE CHAIN' 8 2 A A 14 ? ? 0.068 'SIDE CHAIN' 9 2 G A 22 ? ? 0.074 'SIDE CHAIN' 10 3 G A 22 ? ? 0.082 'SIDE CHAIN' 11 4 A A 6 ? ? 0.063 'SIDE CHAIN' 12 4 G A 9 ? ? 0.081 'SIDE CHAIN' 13 4 G A 22 ? ? 0.080 'SIDE CHAIN' 14 5 G A 4 ? ? 0.071 'SIDE CHAIN' 15 5 A A 6 ? ? 0.058 'SIDE CHAIN' 16 5 G A 9 ? ? 0.085 'SIDE CHAIN' 17 5 G A 22 ? ? 0.077 'SIDE CHAIN' 18 6 G A 9 ? ? 0.076 'SIDE CHAIN' 19 6 A A 14 ? ? 0.066 'SIDE CHAIN' 20 6 G A 22 ? ? 0.077 'SIDE CHAIN' 21 7 G A 4 ? ? 0.065 'SIDE CHAIN' 22 7 A A 6 ? ? 0.101 'SIDE CHAIN' 23 7 A A 16 ? ? 0.106 'SIDE CHAIN' 24 7 G A 22 ? ? 0.090 'SIDE CHAIN' 25 8 G A 4 ? ? 0.069 'SIDE CHAIN' 26 8 A A 16 ? ? 0.084 'SIDE CHAIN' 27 8 G A 22 ? ? 0.079 'SIDE CHAIN' 28 9 G A 4 ? ? 0.067 'SIDE CHAIN' 29 9 A A 15 ? ? 0.055 'SIDE CHAIN' 30 9 G A 17 ? ? 0.065 'SIDE CHAIN' 31 9 G A 22 ? ? 0.076 'SIDE CHAIN' 32 10 G A 4 ? ? 0.068 'SIDE CHAIN' 33 10 A A 13 ? ? 0.052 'SIDE CHAIN' 34 10 G A 22 ? ? 0.067 'SIDE CHAIN' 35 11 G A 4 ? ? 0.064 'SIDE CHAIN' 36 11 A A 6 ? ? 0.060 'SIDE CHAIN' 37 11 A A 7 ? ? 0.052 'SIDE CHAIN' 38 11 G A 17 ? ? 0.078 'SIDE CHAIN' 39 11 G A 22 ? ? 0.075 'SIDE CHAIN' 40 12 A A 6 ? ? 0.064 'SIDE CHAIN' 41 12 A A 16 ? ? 0.071 'SIDE CHAIN' 42 12 G A 22 ? ? 0.070 'SIDE CHAIN' 43 13 A A 16 ? ? 0.052 'SIDE CHAIN' 44 13 C A 23 ? ? 0.070 'SIDE CHAIN' 45 14 G A 4 ? ? 0.062 'SIDE CHAIN' 46 14 A A 6 ? ? 0.066 'SIDE CHAIN' 47 14 G A 12 ? ? 0.078 'SIDE CHAIN' 48 14 A A 13 ? ? 0.090 'SIDE CHAIN' 49 14 A A 16 ? ? 0.085 'SIDE CHAIN' 50 14 G A 22 ? ? 0.074 'SIDE CHAIN' 51 15 G A 4 ? ? 0.074 'SIDE CHAIN' 52 15 A A 6 ? ? 0.077 'SIDE CHAIN' 53 15 A A 7 ? ? 0.054 'SIDE CHAIN' 54 15 G A 9 ? ? 0.082 'SIDE CHAIN' 55 15 U A 11 ? ? 0.091 'SIDE CHAIN' 56 15 A A 20 ? ? 0.062 'SIDE CHAIN' 57 15 G A 22 ? ? 0.080 'SIDE CHAIN' 58 16 A A 6 ? ? 0.058 'SIDE CHAIN' 59 16 A A 15 ? ? 0.089 'SIDE CHAIN' 60 16 A A 20 ? ? 0.059 'SIDE CHAIN' 61 16 G A 22 ? ? 0.084 'SIDE CHAIN' 62 17 G A 4 ? ? 0.068 'SIDE CHAIN' 63 17 A A 6 ? ? 0.064 'SIDE CHAIN' 64 17 G A 9 ? ? 0.082 'SIDE CHAIN' 65 17 U A 10 ? ? 0.079 'SIDE CHAIN' 66 17 A A 15 ? ? 0.062 'SIDE CHAIN' 67 17 G A 22 ? ? 0.079 'SIDE CHAIN' # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1MT4 'double helix' 1MT4 'a-form double helix' 1MT4 'hairpin loop' 1MT4 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 24 1_555 -0.883 -0.281 0.248 -7.199 -21.714 -3.089 1 A_G1:C24_A A 1 ? A 24 ? 19 1 1 A G 2 1_555 A C 23 1_555 -0.690 -0.203 0.421 -2.910 -19.918 -3.667 2 A_G2:C23_A A 2 ? A 23 ? 19 1 1 A C 3 1_555 A G 22 1_555 0.813 -0.280 0.393 1.195 -22.349 -3.171 3 A_C3:G22_A A 3 ? A 22 ? 19 1 1 A G 4 1_555 A C 21 1_555 -0.898 -0.335 0.521 0.321 -25.808 -2.715 4 A_G4:C21_A A 4 ? A 21 ? 19 1 1 A U 5 1_555 A A 20 1_555 0.212 -0.077 0.483 0.523 -23.301 -4.596 5 A_U5:A20_A A 5 ? A 20 ? 20 1 1 A A 6 1_555 A U 19 1_555 -0.244 -0.063 0.554 7.798 -16.572 -1.445 6 A_A6:U19_A A 6 ? A 19 ? 20 1 1 A A 7 1_555 A U 18 1_555 -0.055 -0.060 -0.483 -3.186 -31.599 -0.404 7 A_A7:U18_A A 7 ? A 18 ? 20 1 1 A C 8 1_555 A G 17 1_555 0.082 -0.028 -0.471 1.570 -24.026 2.166 8 A_C8:G17_A A 8 ? A 17 ? 19 1 1 A G 9 1_555 A A 16 1_555 6.716 -4.104 -0.452 0.891 -10.552 -4.837 9 A_G9:A16_A A 9 ? A 16 ? 11 9 1 A U 10 1_555 A A 15 1_555 1.936 -3.647 -2.490 -17.729 9.732 -50.365 10 A_U10:A15_A A 10 ? A 15 ? 24 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 24 1_555 A G 2 1_555 A C 23 1_555 -0.264 -1.479 2.968 -2.830 4.300 33.153 -3.186 0.048 2.773 7.480 4.922 33.539 1 AA_G1G2:C23C24_AA A 1 ? A 24 ? A 2 ? A 23 ? 1 A G 2 1_555 A C 23 1_555 A C 3 1_555 A G 22 1_555 0.057 -1.327 3.057 1.189 1.445 38.935 -2.150 0.048 3.008 2.167 -1.783 38.978 2 AA_G2C3:G22C23_AA A 2 ? A 23 ? A 3 ? A 22 ? 1 A C 3 1_555 A G 22 1_555 A G 4 1_555 A C 21 1_555 0.146 -1.587 2.704 -0.194 17.272 28.234 -4.838 -0.279 1.508 31.910 0.358 33.006 3 AA_C3G4:C21G22_AA A 3 ? A 22 ? A 4 ? A 21 ? 1 A G 4 1_555 A C 21 1_555 A U 5 1_555 A A 20 1_555 0.129 -1.535 3.106 0.496 -0.367 38.637 -2.277 -0.136 3.121 -0.555 -0.750 38.642 4 AA_G4U5:A20C21_AA A 4 ? A 21 ? A 5 ? A 20 ? 1 A U 5 1_555 A A 20 1_555 A A 6 1_555 A U 19 1_555 0.007 -1.752 2.658 -1.640 12.790 29.332 -4.812 -0.223 1.757 23.858 3.059 31.984 5 AA_U5A6:U19A20_AA A 5 ? A 20 ? A 6 ? A 19 ? 1 A A 6 1_555 A U 19 1_555 A A 7 1_555 A U 18 1_555 -0.351 -1.362 3.469 4.184 10.891 34.808 -3.652 1.129 2.869 17.604 -6.763 36.654 6 AA_A6A7:U18U19_AA A 6 ? A 19 ? A 7 ? A 18 ? 1 A A 7 1_555 A U 18 1_555 A C 8 1_555 A G 17 1_555 0.069 -1.167 3.009 -1.547 3.881 32.568 -2.663 -0.360 2.848 6.886 2.744 32.828 7 AA_A7C8:G17U18_AA A 7 ? A 18 ? A 8 ? A 17 ? 1 A C 8 1_555 A G 17 1_555 A G 9 1_555 A A 16 1_555 0.401 -0.494 3.589 1.747 3.137 62.759 -0.628 -0.298 3.573 3.010 -1.676 62.852 8 AA_C8G9:A16G17_AA A 8 ? A 17 ? A 9 ? A 16 ? 1 A G 9 1_555 A A 16 1_555 A U 10 1_555 A A 15 1_555 -2.771 -1.880 4.631 34.994 3.820 10.847 -3.383 8.088 -1.435 7.966 -72.976 36.784 9 AA_G9U10:A15A16_AA A 9 ? A 16 ? A 10 ? A 15 ? #