data_1MT6 # _entry.id 1MT6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1MT6 RCSB RCSB017164 WWPDB D_1000017164 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1MUF _pdbx_database_related.details 'Structure of histone H3 K4-specific methyltransferase SET7/9' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1MT6 _pdbx_database_status.recvd_initial_deposition_date 2002-09-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jacobs, S.A.' 1 'Harp, J.M.' 2 'Devarakonda, S.' 3 'Kim, Y.' 4 'Rastinejad, F.' 5 'Khorasanizadeh, S.' 6 # _citation.id primary _citation.title 'The active site of the SET domain is constructed on a knot' _citation.journal_abbrev Nat.Struct.Biol. _citation.journal_volume 9 _citation.page_first 833 _citation.page_last 838 _citation.year 2002 _citation.journal_id_ASTM NSBIEW _citation.country US _citation.journal_id_ISSN 1072-8368 _citation.journal_id_CSD 2024 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12389038 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Jacobs, S.A.' 1 primary 'Harp, J.M.' 2 primary 'Devarakonda, S.' 3 primary 'Kim, Y.' 4 primary 'Rastinejad, F.' 5 primary 'Khorasanizadeh, S.' 6 # _cell.entry_id 1MT6 _cell.length_a 70.347 _cell.length_b 76.038 _cell.length_c 166.284 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MT6 _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man SET9 31150.412 1 2.1.1.43 ? ? ? 2 non-polymer syn S-ADENOSYL-L-HOMOCYSTEINE 384.411 1 ? ? ? ? 3 water nat water 18.015 171 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'histone H3 lysine 4 specific methyltransferase, SET7/9' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;TLEGYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCWIYYPDGGSLVGEVNEDG EMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRPHFELMPGNSVYHFDKSTSSCISTNALLPDPYESERVY VAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALNGNTLSLDEETVIDVPEPYNHVSKYCASLGHKANH SFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGY ; _entity_poly.pdbx_seq_one_letter_code_can ;TLEGYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCWIYYPDGGSLVGEVNEDG EMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRPHFELMPGNSVYHFDKSTSSCISTNALLPDPYESERVY VAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALNGNTLSLDEETVIDVPEPYNHVSKYCASLGHKANH SFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGY ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 LEU n 1 3 GLU n 1 4 GLY n 1 5 TYR n 1 6 TYR n 1 7 VAL n 1 8 ASP n 1 9 ASP n 1 10 ALA n 1 11 LEU n 1 12 GLN n 1 13 GLY n 1 14 GLN n 1 15 GLY n 1 16 VAL n 1 17 TYR n 1 18 THR n 1 19 TYR n 1 20 GLU n 1 21 ASP n 1 22 GLY n 1 23 GLY n 1 24 VAL n 1 25 LEU n 1 26 GLN n 1 27 GLY n 1 28 THR n 1 29 TYR n 1 30 VAL n 1 31 ASP n 1 32 GLY n 1 33 GLU n 1 34 LEU n 1 35 ASN n 1 36 GLY n 1 37 PRO n 1 38 ALA n 1 39 GLN n 1 40 GLU n 1 41 TYR n 1 42 ASP n 1 43 THR n 1 44 ASP n 1 45 GLY n 1 46 ARG n 1 47 LEU n 1 48 ILE n 1 49 PHE n 1 50 LYS n 1 51 GLY n 1 52 GLN n 1 53 TYR n 1 54 LYS n 1 55 ASP n 1 56 ASN n 1 57 ILE n 1 58 ARG n 1 59 HIS n 1 60 GLY n 1 61 VAL n 1 62 CYS n 1 63 TRP n 1 64 ILE n 1 65 TYR n 1 66 TYR n 1 67 PRO n 1 68 ASP n 1 69 GLY n 1 70 GLY n 1 71 SER n 1 72 LEU n 1 73 VAL n 1 74 GLY n 1 75 GLU n 1 76 VAL n 1 77 ASN n 1 78 GLU n 1 79 ASP n 1 80 GLY n 1 81 GLU n 1 82 MET n 1 83 THR n 1 84 GLY n 1 85 GLU n 1 86 LYS n 1 87 ILE n 1 88 ALA n 1 89 TYR n 1 90 VAL n 1 91 TYR n 1 92 PRO n 1 93 ASP n 1 94 GLU n 1 95 ARG n 1 96 THR n 1 97 ALA n 1 98 LEU n 1 99 TYR n 1 100 GLY n 1 101 LYS n 1 102 PHE n 1 103 ILE n 1 104 ASP n 1 105 GLY n 1 106 GLU n 1 107 MET n 1 108 ILE n 1 109 GLU n 1 110 GLY n 1 111 LYS n 1 112 LEU n 1 113 ALA n 1 114 THR n 1 115 LEU n 1 116 MET n 1 117 SER n 1 118 THR n 1 119 GLU n 1 120 GLU n 1 121 GLY n 1 122 ARG n 1 123 PRO n 1 124 HIS n 1 125 PHE n 1 126 GLU n 1 127 LEU n 1 128 MET n 1 129 PRO n 1 130 GLY n 1 131 ASN n 1 132 SER n 1 133 VAL n 1 134 TYR n 1 135 HIS n 1 136 PHE n 1 137 ASP n 1 138 LYS n 1 139 SER n 1 140 THR n 1 141 SER n 1 142 SER n 1 143 CYS n 1 144 ILE n 1 145 SER n 1 146 THR n 1 147 ASN n 1 148 ALA n 1 149 LEU n 1 150 LEU n 1 151 PRO n 1 152 ASP n 1 153 PRO n 1 154 TYR n 1 155 GLU n 1 156 SER n 1 157 GLU n 1 158 ARG n 1 159 VAL n 1 160 TYR n 1 161 VAL n 1 162 ALA n 1 163 GLU n 1 164 SER n 1 165 LEU n 1 166 ILE n 1 167 SER n 1 168 SER n 1 169 ALA n 1 170 GLY n 1 171 GLU n 1 172 GLY n 1 173 LEU n 1 174 PHE n 1 175 SER n 1 176 LYS n 1 177 VAL n 1 178 ALA n 1 179 VAL n 1 180 GLY n 1 181 PRO n 1 182 ASN n 1 183 THR n 1 184 VAL n 1 185 MET n 1 186 SER n 1 187 PHE n 1 188 TYR n 1 189 ASN n 1 190 GLY n 1 191 VAL n 1 192 ARG n 1 193 ILE n 1 194 THR n 1 195 HIS n 1 196 GLN n 1 197 GLU n 1 198 VAL n 1 199 ASP n 1 200 SER n 1 201 ARG n 1 202 ASP n 1 203 TRP n 1 204 ALA n 1 205 LEU n 1 206 ASN n 1 207 GLY n 1 208 ASN n 1 209 THR n 1 210 LEU n 1 211 SER n 1 212 LEU n 1 213 ASP n 1 214 GLU n 1 215 GLU n 1 216 THR n 1 217 VAL n 1 218 ILE n 1 219 ASP n 1 220 VAL n 1 221 PRO n 1 222 GLU n 1 223 PRO n 1 224 TYR n 1 225 ASN n 1 226 HIS n 1 227 VAL n 1 228 SER n 1 229 LYS n 1 230 TYR n 1 231 CYS n 1 232 ALA n 1 233 SER n 1 234 LEU n 1 235 GLY n 1 236 HIS n 1 237 LYS n 1 238 ALA n 1 239 ASN n 1 240 HIS n 1 241 SER n 1 242 PHE n 1 243 THR n 1 244 PRO n 1 245 ASN n 1 246 CYS n 1 247 ILE n 1 248 TYR n 1 249 ASP n 1 250 MET n 1 251 PHE n 1 252 VAL n 1 253 HIS n 1 254 PRO n 1 255 ARG n 1 256 PHE n 1 257 GLY n 1 258 PRO n 1 259 ILE n 1 260 LYS n 1 261 CYS n 1 262 ILE n 1 263 ARG n 1 264 THR n 1 265 LEU n 1 266 ARG n 1 267 ALA n 1 268 VAL n 1 269 GLU n 1 270 ALA n 1 271 ASP n 1 272 GLU n 1 273 GLU n 1 274 LEU n 1 275 THR n 1 276 VAL n 1 277 ALA n 1 278 TYR n 1 279 GLY n 1 280 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGex _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SET7_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TLEGYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCWIYYPDGGSLVGEVNEDG EMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRPHFELMPGNSVYHFDKSTSSCISTNALLPDPYESERVY VAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALNGNTLSLDEETVIDVPEPYNHVSKYCASLGHKANH SFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGY ; _struct_ref.pdbx_align_begin 58 _struct_ref.pdbx_db_accession Q8WTS6 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1MT6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 280 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8WTS6 _struct_ref_seq.db_align_beg 58 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 337 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 58 _struct_ref_seq.pdbx_auth_seq_align_end 337 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAH 'L-peptide linking' n S-ADENOSYL-L-HOMOCYSTEINE ? 'C14 H20 N6 O5 S' 384.411 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1MT6 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 65.52 _exptl_crystal.density_Matthews 3.57 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 283 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details 'PEG 4000, sodium citrate, Isopropanol, DTT, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 283K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2002-08-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'single crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97780 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97780 # _reflns.entry_id 1MT6 _reflns.observed_criterion_sigma_I 0.00 _reflns.observed_criterion_sigma_F 0.00 _reflns.d_resolution_low 30.00 _reflns.d_resolution_high 2.20 _reflns.number_obs 21496 _reflns.number_all 21496 _reflns.percent_possible_obs 93.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 20.8 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 77.1 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1MT6 _refine.ls_number_reflns_obs 21464 _refine.ls_number_reflns_all 21464 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 132634.40 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.ls_d_res_low 28.64 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 93.0 _refine.ls_R_factor_obs 0.2260000 _refine.ls_R_factor_all 0.2260000 _refine.ls_R_factor_R_work 0.2260000 _refine.ls_R_factor_R_free 0.2630000 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.9 _refine.ls_number_reflns_R_free 2132 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 52.4 _refine.aniso_B[1][1] -13.83 _refine.aniso_B[2][2] -14.94 _refine.aniso_B[3][3] 28.78 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.330675 _refine.solvent_model_param_bsol 59.6341 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF 132634.40 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1MT6 _refine_analyze.Luzzati_coordinate_error_obs 0.30 _refine_analyze.Luzzati_sigma_a_obs 0.52 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.35 _refine_analyze.Luzzati_sigma_a_free 0.42 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2187 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 171 _refine_hist.number_atoms_total 2384 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 28.64 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.040 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 3.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 28.1 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 2.46 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 2.86 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 3.90 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 4.72 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 5.98 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.34 _refine_ls_shell.number_reflns_R_work 2655 _refine_ls_shell.R_factor_R_work 0.3700000 _refine_ls_shell.percent_reflns_obs 78.8 _refine_ls_shell.R_factor_R_free 0.3560000 _refine_ls_shell.R_factor_R_free_error 0.020 _refine_ls_shell.percent_reflns_R_free 10.8 _refine_ls_shell.number_reflns_R_free 323 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 SAH.PARAM SAH.TOP 'X-RAY DIFFRACTION' 3 WATER.PARAM WATER.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1MT6 _struct.title 'Structure of histone H3 K4-specific methyltransferase SET7/9 with AdoHcy' _struct.pdbx_descriptor 'SET9 (2.1.1.43)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1MT6 _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'SET domain, histone lysine methyltransferase, AdoHcy, knot, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 152 ? ARG A 158 ? ASP A 209 ARG A 215 1 ? 7 HELX_P HELX_P2 2 HIS A 195 ? ARG A 201 ? HIS A 252 ARG A 258 1 ? 7 HELX_P HELX_P3 3 ASP A 202 ? ASN A 206 ? ASP A 259 ASN A 263 5 ? 5 HELX_P HELX_P4 4 LEU A 234 ? ALA A 238 ? LEU A 291 ALA A 295 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 10 ? B ? 8 ? C ? 2 ? D ? 4 ? E ? 3 ? F ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 16 ? THR A 18 ? VAL A 73 THR A 75 A 2 VAL A 24 ? GLN A 26 ? VAL A 81 GLN A 83 A 3 GLY A 36 ? TYR A 41 ? GLY A 93 TYR A 98 A 4 LEU A 47 ? LYS A 54 ? LEU A 104 LYS A 111 A 5 VAL A 61 ? TYR A 65 ? VAL A 118 TYR A 122 A 6 SER A 71 ? GLU A 75 ? SER A 128 GLU A 132 A 7 GLY A 84 ? VAL A 90 ? GLY A 141 VAL A 147 A 8 THR A 96 ? ILE A 103 ? THR A 153 ILE A 160 A 9 GLU A 106 ? SER A 117 ? GLU A 163 SER A 174 A 10 HIS A 124 ? LEU A 127 ? HIS A 181 LEU A 184 B 1 ILE A 57 ? ARG A 58 ? ILE A 114 ARG A 115 B 2 LEU A 47 ? LYS A 54 ? LEU A 104 LYS A 111 B 3 VAL A 61 ? TYR A 65 ? VAL A 118 TYR A 122 B 4 SER A 71 ? GLU A 75 ? SER A 128 GLU A 132 B 5 GLY A 84 ? VAL A 90 ? GLY A 141 VAL A 147 B 6 THR A 96 ? ILE A 103 ? THR A 153 ILE A 160 B 7 GLU A 106 ? SER A 117 ? GLU A 163 SER A 174 B 8 VAL A 133 ? TYR A 134 ? VAL A 190 TYR A 191 C 1 TYR A 29 ? VAL A 30 ? TYR A 86 VAL A 87 C 2 GLU A 33 ? LEU A 34 ? GLU A 90 LEU A 91 D 1 VAL A 159 ? GLU A 163 ? VAL A 216 GLU A 220 D 2 GLU A 171 ? SER A 175 ? GLU A 228 SER A 232 D 3 GLU A 273 ? VAL A 276 ? GLU A 330 VAL A 333 D 4 ASN A 239 ? HIS A 240 ? ASN A 296 HIS A 297 E 1 VAL A 184 ? TYR A 188 ? VAL A 241 TYR A 245 E 2 GLY A 257 ? THR A 264 ? GLY A 314 THR A 321 E 3 CYS A 246 ? HIS A 253 ? CYS A 303 HIS A 310 F 1 VAL A 191 ? THR A 194 ? VAL A 248 THR A 251 F 2 THR A 216 ? ASP A 219 ? THR A 273 ASP A 276 F 3 LEU A 210 ? SER A 211 ? LEU A 267 SER A 268 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 17 ? N TYR A 74 O LEU A 25 ? O LEU A 82 A 2 3 N GLN A 26 ? N GLN A 83 O GLN A 39 ? O GLN A 96 A 3 4 N GLY A 36 ? N GLY A 93 O TYR A 53 ? O TYR A 110 A 4 5 N LYS A 50 ? N LYS A 107 O TRP A 63 ? O TRP A 120 A 5 6 N CYS A 62 ? N CYS A 119 O GLY A 74 ? O GLY A 131 A 6 7 N SER A 71 ? N SER A 128 O VAL A 90 ? O VAL A 147 A 7 8 N TYR A 89 ? N TYR A 146 O LEU A 98 ? O LEU A 155 A 8 9 N TYR A 99 ? N TYR A 156 O LYS A 111 ? O LYS A 168 A 9 10 N SER A 117 ? N SER A 174 O HIS A 124 ? O HIS A 181 B 1 2 O ILE A 57 ? O ILE A 114 N LYS A 54 ? N LYS A 111 B 2 3 N LYS A 50 ? N LYS A 107 O TRP A 63 ? O TRP A 120 B 3 4 N CYS A 62 ? N CYS A 119 O GLY A 74 ? O GLY A 131 B 4 5 N SER A 71 ? N SER A 128 O VAL A 90 ? O VAL A 147 B 5 6 N TYR A 89 ? N TYR A 146 O LEU A 98 ? O LEU A 155 B 6 7 N TYR A 99 ? N TYR A 156 O LYS A 111 ? O LYS A 168 B 7 8 N GLY A 110 ? N GLY A 167 O TYR A 134 ? O TYR A 191 C 1 2 N VAL A 30 ? N VAL A 87 O GLU A 33 ? O GLU A 90 D 1 2 N ALA A 162 ? N ALA A 219 O GLY A 172 ? O GLY A 229 D 2 3 N LEU A 173 ? N LEU A 230 O LEU A 274 ? O LEU A 331 D 3 4 O VAL A 276 ? O VAL A 333 N ASN A 239 ? N ASN A 296 E 1 2 N TYR A 188 ? N TYR A 245 O LYS A 260 ? O LYS A 317 E 2 3 O ILE A 259 ? O ILE A 316 N PHE A 251 ? N PHE A 308 F 1 2 N ILE A 193 ? N ILE A 250 O VAL A 217 ? O VAL A 274 F 2 3 O ILE A 218 ? O ILE A 275 N LEU A 210 ? N LEU A 267 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 13 _struct_site.details 'BINDING SITE FOR RESIDUE SAH A 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 ALA A 169 ? ALA A 226 . ? 1_555 ? 2 AC1 13 GLU A 171 ? GLU A 228 . ? 1_555 ? 3 AC1 13 ASN A 208 ? ASN A 265 . ? 1_555 ? 4 AC1 13 HIS A 236 ? HIS A 293 . ? 1_555 ? 5 AC1 13 LYS A 237 ? LYS A 294 . ? 1_555 ? 6 AC1 13 ALA A 238 ? ALA A 295 . ? 1_555 ? 7 AC1 13 ASN A 239 ? ASN A 296 . ? 1_555 ? 8 AC1 13 HIS A 240 ? HIS A 297 . ? 1_555 ? 9 AC1 13 TYR A 278 ? TYR A 335 . ? 1_555 ? 10 AC1 13 HOH C . ? HOH A 416 . ? 1_555 ? 11 AC1 13 HOH C . ? HOH A 447 . ? 1_555 ? 12 AC1 13 HOH C . ? HOH A 478 . ? 1_555 ? 13 AC1 13 HOH C . ? HOH A 493 . ? 1_555 ? # _database_PDB_matrix.entry_id 1MT6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1MT6 _atom_sites.fract_transf_matrix[1][1] 0.014215 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013151 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006014 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 58 58 THR THR A . n A 1 2 LEU 2 59 59 LEU LEU A . n A 1 3 GLU 3 60 60 GLU GLU A . n A 1 4 GLY 4 61 61 GLY GLY A . n A 1 5 TYR 5 62 62 TYR TYR A . n A 1 6 TYR 6 63 63 TYR TYR A . n A 1 7 VAL 7 64 64 VAL VAL A . n A 1 8 ASP 8 65 65 ASP ASP A . n A 1 9 ASP 9 66 66 ASP ASP A . n A 1 10 ALA 10 67 67 ALA ALA A . n A 1 11 LEU 11 68 68 LEU LEU A . n A 1 12 GLN 12 69 69 GLN GLN A . n A 1 13 GLY 13 70 70 GLY GLY A . n A 1 14 GLN 14 71 71 GLN GLN A . n A 1 15 GLY 15 72 72 GLY GLY A . n A 1 16 VAL 16 73 73 VAL VAL A . n A 1 17 TYR 17 74 74 TYR TYR A . n A 1 18 THR 18 75 75 THR THR A . n A 1 19 TYR 19 76 76 TYR TYR A . n A 1 20 GLU 20 77 77 GLU GLU A . n A 1 21 ASP 21 78 78 ASP ASP A . n A 1 22 GLY 22 79 79 GLY GLY A . n A 1 23 GLY 23 80 80 GLY GLY A . n A 1 24 VAL 24 81 81 VAL VAL A . n A 1 25 LEU 25 82 82 LEU LEU A . n A 1 26 GLN 26 83 83 GLN GLN A . n A 1 27 GLY 27 84 84 GLY GLY A . n A 1 28 THR 28 85 85 THR THR A . n A 1 29 TYR 29 86 86 TYR TYR A . n A 1 30 VAL 30 87 87 VAL VAL A . n A 1 31 ASP 31 88 88 ASP ASP A . n A 1 32 GLY 32 89 89 GLY GLY A . n A 1 33 GLU 33 90 90 GLU GLU A . n A 1 34 LEU 34 91 91 LEU LEU A . n A 1 35 ASN 35 92 92 ASN ASN A . n A 1 36 GLY 36 93 93 GLY GLY A . n A 1 37 PRO 37 94 94 PRO PRO A . n A 1 38 ALA 38 95 95 ALA ALA A . n A 1 39 GLN 39 96 96 GLN GLN A . n A 1 40 GLU 40 97 97 GLU GLU A . n A 1 41 TYR 41 98 98 TYR TYR A . n A 1 42 ASP 42 99 99 ASP ASP A . n A 1 43 THR 43 100 100 THR THR A . n A 1 44 ASP 44 101 101 ASP ASP A . n A 1 45 GLY 45 102 102 GLY GLY A . n A 1 46 ARG 46 103 103 ARG ARG A . n A 1 47 LEU 47 104 104 LEU LEU A . n A 1 48 ILE 48 105 105 ILE ILE A . n A 1 49 PHE 49 106 106 PHE PHE A . n A 1 50 LYS 50 107 107 LYS LYS A . n A 1 51 GLY 51 108 108 GLY GLY A . n A 1 52 GLN 52 109 109 GLN GLN A . n A 1 53 TYR 53 110 110 TYR TYR A . n A 1 54 LYS 54 111 111 LYS LYS A . n A 1 55 ASP 55 112 112 ASP ASP A . n A 1 56 ASN 56 113 113 ASN ASN A . n A 1 57 ILE 57 114 114 ILE ILE A . n A 1 58 ARG 58 115 115 ARG ARG A . n A 1 59 HIS 59 116 116 HIS HIS A . n A 1 60 GLY 60 117 117 GLY GLY A . n A 1 61 VAL 61 118 118 VAL VAL A . n A 1 62 CYS 62 119 119 CYS CYS A . n A 1 63 TRP 63 120 120 TRP TRP A . n A 1 64 ILE 64 121 121 ILE ILE A . n A 1 65 TYR 65 122 122 TYR TYR A . n A 1 66 TYR 66 123 123 TYR TYR A . n A 1 67 PRO 67 124 124 PRO PRO A . n A 1 68 ASP 68 125 125 ASP ASP A . n A 1 69 GLY 69 126 126 GLY GLY A . n A 1 70 GLY 70 127 127 GLY GLY A . n A 1 71 SER 71 128 128 SER SER A . n A 1 72 LEU 72 129 129 LEU LEU A . n A 1 73 VAL 73 130 130 VAL VAL A . n A 1 74 GLY 74 131 131 GLY GLY A . n A 1 75 GLU 75 132 132 GLU GLU A . n A 1 76 VAL 76 133 133 VAL VAL A . n A 1 77 ASN 77 134 134 ASN ASN A . n A 1 78 GLU 78 135 135 GLU GLU A . n A 1 79 ASP 79 136 136 ASP ASP A . n A 1 80 GLY 80 137 137 GLY GLY A . n A 1 81 GLU 81 138 138 GLU GLU A . n A 1 82 MET 82 139 139 MET MET A . n A 1 83 THR 83 140 140 THR THR A . n A 1 84 GLY 84 141 141 GLY GLY A . n A 1 85 GLU 85 142 142 GLU GLU A . n A 1 86 LYS 86 143 143 LYS LYS A . n A 1 87 ILE 87 144 144 ILE ILE A . n A 1 88 ALA 88 145 145 ALA ALA A . n A 1 89 TYR 89 146 146 TYR TYR A . n A 1 90 VAL 90 147 147 VAL VAL A . n A 1 91 TYR 91 148 148 TYR TYR A . n A 1 92 PRO 92 149 149 PRO PRO A . n A 1 93 ASP 93 150 150 ASP ASP A . n A 1 94 GLU 94 151 151 GLU GLU A . n A 1 95 ARG 95 152 152 ARG ARG A . n A 1 96 THR 96 153 153 THR THR A . n A 1 97 ALA 97 154 154 ALA ALA A . n A 1 98 LEU 98 155 155 LEU LEU A . n A 1 99 TYR 99 156 156 TYR TYR A . n A 1 100 GLY 100 157 157 GLY GLY A . n A 1 101 LYS 101 158 158 LYS LYS A . n A 1 102 PHE 102 159 159 PHE PHE A . n A 1 103 ILE 103 160 160 ILE ILE A . n A 1 104 ASP 104 161 161 ASP ASP A . n A 1 105 GLY 105 162 162 GLY GLY A . n A 1 106 GLU 106 163 163 GLU GLU A . n A 1 107 MET 107 164 164 MET MET A . n A 1 108 ILE 108 165 165 ILE ILE A . n A 1 109 GLU 109 166 166 GLU GLU A . n A 1 110 GLY 110 167 167 GLY GLY A . n A 1 111 LYS 111 168 168 LYS LYS A . n A 1 112 LEU 112 169 169 LEU LEU A . n A 1 113 ALA 113 170 170 ALA ALA A . n A 1 114 THR 114 171 171 THR THR A . n A 1 115 LEU 115 172 172 LEU LEU A . n A 1 116 MET 116 173 173 MET MET A . n A 1 117 SER 117 174 174 SER SER A . n A 1 118 THR 118 175 175 THR THR A . n A 1 119 GLU 119 176 176 GLU GLU A . n A 1 120 GLU 120 177 177 GLU GLU A . n A 1 121 GLY 121 178 178 GLY GLY A . n A 1 122 ARG 122 179 179 ARG ARG A . n A 1 123 PRO 123 180 180 PRO PRO A . n A 1 124 HIS 124 181 181 HIS HIS A . n A 1 125 PHE 125 182 182 PHE PHE A . n A 1 126 GLU 126 183 183 GLU GLU A . n A 1 127 LEU 127 184 184 LEU LEU A . n A 1 128 MET 128 185 185 MET MET A . n A 1 129 PRO 129 186 186 PRO PRO A . n A 1 130 GLY 130 187 187 GLY GLY A . n A 1 131 ASN 131 188 188 ASN ASN A . n A 1 132 SER 132 189 189 SER SER A . n A 1 133 VAL 133 190 190 VAL VAL A . n A 1 134 TYR 134 191 191 TYR TYR A . n A 1 135 HIS 135 192 192 HIS HIS A . n A 1 136 PHE 136 193 193 PHE PHE A . n A 1 137 ASP 137 194 194 ASP ASP A . n A 1 138 LYS 138 195 195 LYS LYS A . n A 1 139 SER 139 196 196 SER SER A . n A 1 140 THR 140 197 197 THR THR A . n A 1 141 SER 141 198 198 SER SER A . n A 1 142 SER 142 199 199 SER SER A . n A 1 143 CYS 143 200 200 CYS CYS A . n A 1 144 ILE 144 201 201 ILE ILE A . n A 1 145 SER 145 202 202 SER SER A . n A 1 146 THR 146 203 203 THR THR A . n A 1 147 ASN 147 204 204 ASN ASN A . n A 1 148 ALA 148 205 205 ALA ALA A . n A 1 149 LEU 149 206 206 LEU LEU A . n A 1 150 LEU 150 207 207 LEU LEU A . n A 1 151 PRO 151 208 208 PRO PRO A . n A 1 152 ASP 152 209 209 ASP ASP A . n A 1 153 PRO 153 210 210 PRO PRO A . n A 1 154 TYR 154 211 211 TYR TYR A . n A 1 155 GLU 155 212 212 GLU GLU A . n A 1 156 SER 156 213 213 SER SER A . n A 1 157 GLU 157 214 214 GLU GLU A . n A 1 158 ARG 158 215 215 ARG ARG A . n A 1 159 VAL 159 216 216 VAL VAL A . n A 1 160 TYR 160 217 217 TYR TYR A . n A 1 161 VAL 161 218 218 VAL VAL A . n A 1 162 ALA 162 219 219 ALA ALA A . n A 1 163 GLU 163 220 220 GLU GLU A . n A 1 164 SER 164 221 221 SER SER A . n A 1 165 LEU 165 222 222 LEU LEU A . n A 1 166 ILE 166 223 223 ILE ILE A . n A 1 167 SER 167 224 224 SER SER A . n A 1 168 SER 168 225 225 SER SER A . n A 1 169 ALA 169 226 226 ALA ALA A . n A 1 170 GLY 170 227 227 GLY GLY A . n A 1 171 GLU 171 228 228 GLU GLU A . n A 1 172 GLY 172 229 229 GLY GLY A . n A 1 173 LEU 173 230 230 LEU LEU A . n A 1 174 PHE 174 231 231 PHE PHE A . n A 1 175 SER 175 232 232 SER SER A . n A 1 176 LYS 176 233 233 LYS LYS A . n A 1 177 VAL 177 234 234 VAL VAL A . n A 1 178 ALA 178 235 235 ALA ALA A . n A 1 179 VAL 179 236 236 VAL VAL A . n A 1 180 GLY 180 237 237 GLY GLY A . n A 1 181 PRO 181 238 238 PRO PRO A . n A 1 182 ASN 182 239 239 ASN ASN A . n A 1 183 THR 183 240 240 THR THR A . n A 1 184 VAL 184 241 241 VAL VAL A . n A 1 185 MET 185 242 242 MET MET A . n A 1 186 SER 186 243 243 SER SER A . n A 1 187 PHE 187 244 244 PHE PHE A . n A 1 188 TYR 188 245 245 TYR TYR A . n A 1 189 ASN 189 246 246 ASN ASN A . n A 1 190 GLY 190 247 247 GLY GLY A . n A 1 191 VAL 191 248 248 VAL VAL A . n A 1 192 ARG 192 249 249 ARG ARG A . n A 1 193 ILE 193 250 250 ILE ILE A . n A 1 194 THR 194 251 251 THR THR A . n A 1 195 HIS 195 252 252 HIS HIS A . n A 1 196 GLN 196 253 253 GLN GLN A . n A 1 197 GLU 197 254 254 GLU GLU A . n A 1 198 VAL 198 255 255 VAL VAL A . n A 1 199 ASP 199 256 256 ASP ASP A . n A 1 200 SER 200 257 257 SER SER A . n A 1 201 ARG 201 258 258 ARG ARG A . n A 1 202 ASP 202 259 259 ASP ASP A . n A 1 203 TRP 203 260 260 TRP TRP A . n A 1 204 ALA 204 261 261 ALA ALA A . n A 1 205 LEU 205 262 262 LEU LEU A . n A 1 206 ASN 206 263 263 ASN ASN A . n A 1 207 GLY 207 264 264 GLY GLY A . n A 1 208 ASN 208 265 265 ASN ASN A . n A 1 209 THR 209 266 266 THR THR A . n A 1 210 LEU 210 267 267 LEU LEU A . n A 1 211 SER 211 268 268 SER SER A . n A 1 212 LEU 212 269 269 LEU LEU A . n A 1 213 ASP 213 270 270 ASP ASP A . n A 1 214 GLU 214 271 271 GLU GLU A . n A 1 215 GLU 215 272 272 GLU GLU A . n A 1 216 THR 216 273 273 THR THR A . n A 1 217 VAL 217 274 274 VAL VAL A . n A 1 218 ILE 218 275 275 ILE ILE A . n A 1 219 ASP 219 276 276 ASP ASP A . n A 1 220 VAL 220 277 277 VAL VAL A . n A 1 221 PRO 221 278 278 PRO PRO A . n A 1 222 GLU 222 279 279 GLU GLU A . n A 1 223 PRO 223 280 280 PRO PRO A . n A 1 224 TYR 224 281 281 TYR TYR A . n A 1 225 ASN 225 282 282 ASN ASN A . n A 1 226 HIS 226 283 283 HIS HIS A . n A 1 227 VAL 227 284 284 VAL VAL A . n A 1 228 SER 228 285 285 SER SER A . n A 1 229 LYS 229 286 286 LYS LYS A . n A 1 230 TYR 230 287 287 TYR TYR A . n A 1 231 CYS 231 288 288 CYS CYS A . n A 1 232 ALA 232 289 289 ALA ALA A . n A 1 233 SER 233 290 290 SER SER A . n A 1 234 LEU 234 291 291 LEU LEU A . n A 1 235 GLY 235 292 292 GLY GLY A . n A 1 236 HIS 236 293 293 HIS HIS A . n A 1 237 LYS 237 294 294 LYS LYS A . n A 1 238 ALA 238 295 295 ALA ALA A . n A 1 239 ASN 239 296 296 ASN ASN A . n A 1 240 HIS 240 297 297 HIS HIS A . n A 1 241 SER 241 298 298 SER SER A . n A 1 242 PHE 242 299 299 PHE PHE A . n A 1 243 THR 243 300 300 THR THR A . n A 1 244 PRO 244 301 301 PRO PRO A . n A 1 245 ASN 245 302 302 ASN ASN A . n A 1 246 CYS 246 303 303 CYS CYS A . n A 1 247 ILE 247 304 304 ILE ILE A . n A 1 248 TYR 248 305 305 TYR TYR A . n A 1 249 ASP 249 306 306 ASP ASP A . n A 1 250 MET 250 307 307 MET MET A . n A 1 251 PHE 251 308 308 PHE PHE A . n A 1 252 VAL 252 309 309 VAL VAL A . n A 1 253 HIS 253 310 310 HIS HIS A . n A 1 254 PRO 254 311 311 PRO PRO A . n A 1 255 ARG 255 312 312 ARG ARG A . n A 1 256 PHE 256 313 313 PHE PHE A . n A 1 257 GLY 257 314 314 GLY GLY A . n A 1 258 PRO 258 315 315 PRO PRO A . n A 1 259 ILE 259 316 316 ILE ILE A . n A 1 260 LYS 260 317 317 LYS LYS A . n A 1 261 CYS 261 318 318 CYS CYS A . n A 1 262 ILE 262 319 319 ILE ILE A . n A 1 263 ARG 263 320 320 ARG ARG A . n A 1 264 THR 264 321 321 THR THR A . n A 1 265 LEU 265 322 322 LEU LEU A . n A 1 266 ARG 266 323 323 ARG ARG A . n A 1 267 ALA 267 324 324 ALA ALA A . n A 1 268 VAL 268 325 325 VAL VAL A . n A 1 269 GLU 269 326 326 GLU GLU A . n A 1 270 ALA 270 327 327 ALA ALA A . n A 1 271 ASP 271 328 328 ASP ASP A . n A 1 272 GLU 272 329 329 GLU GLU A . n A 1 273 GLU 273 330 330 GLU GLU A . n A 1 274 LEU 274 331 331 LEU LEU A . n A 1 275 THR 275 332 332 THR THR A . n A 1 276 VAL 276 333 333 VAL VAL A . n A 1 277 ALA 277 334 334 ALA ALA A . n A 1 278 TYR 278 335 335 TYR TYR A . n A 1 279 GLY 279 336 336 GLY GLY A . n A 1 280 TYR 280 337 337 TYR TYR A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 450 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-11-06 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SCALEPACK 'data scaling' . ? 2 CNS refinement . ? 3 HKL-2000 'data reduction' . ? 4 CNS phasing . ? 5 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CG A GLU 77 ? ? CD A GLU 77 ? ? 1.614 1.515 0.099 0.015 N 2 1 CB A TRP 120 ? ? CG A TRP 120 ? ? 1.358 1.498 -0.140 0.018 N 3 1 CZ A TYR 123 ? ? CE2 A TYR 123 ? ? 1.463 1.381 0.082 0.013 N 4 1 CA A ILE 144 ? ? CB A ILE 144 ? ? 1.705 1.544 0.161 0.023 N 5 1 CZ A TYR 148 ? ? CE2 A TYR 148 ? ? 1.275 1.381 -0.106 0.013 N 6 1 CE2 A TYR 148 ? ? CD2 A TYR 148 ? ? 1.490 1.389 0.101 0.015 N 7 1 CE2 A TYR 156 ? ? CD2 A TYR 156 ? ? 1.528 1.389 0.139 0.015 N 8 1 CD A GLU 163 ? ? OE1 A GLU 163 ? ? 1.326 1.252 0.074 0.011 N 9 1 CG A MET 164 ? ? SD A MET 164 ? ? 1.964 1.807 0.157 0.026 N 10 1 CE1 A PHE 193 ? ? CZ A PHE 193 ? ? 1.557 1.369 0.188 0.019 N 11 1 CG A GLU 214 ? ? CD A GLU 214 ? ? 1.618 1.515 0.103 0.015 N 12 1 CD A GLU 214 ? ? OE2 A GLU 214 ? ? 1.323 1.252 0.071 0.011 N 13 1 CB A ARG 215 ? ? CG A ARG 215 ? ? 1.303 1.521 -0.218 0.027 N 14 1 NE A ARG 215 ? ? CZ A ARG 215 ? ? 1.405 1.326 0.079 0.013 N 15 1 CZ A ARG 215 ? ? NH1 A ARG 215 ? ? 1.447 1.326 0.121 0.013 N 16 1 CZ A ARG 215 ? ? NH2 A ARG 215 ? ? 1.431 1.326 0.105 0.013 N 17 1 CA A VAL 216 ? ? CB A VAL 216 ? ? 1.723 1.543 0.180 0.021 N 18 1 CG A GLU 220 ? ? CD A GLU 220 ? ? 1.678 1.515 0.163 0.015 N 19 1 CG A GLU 228 ? ? CD A GLU 228 ? ? 1.620 1.515 0.105 0.015 N 20 1 CG A LEU 230 ? ? CD1 A LEU 230 ? ? 1.743 1.514 0.229 0.037 N 21 1 CD1 A PHE 244 ? ? CE1 A PHE 244 ? ? 1.522 1.388 0.134 0.020 N 22 1 CG A GLU 254 ? ? CD A GLU 254 ? ? 1.616 1.515 0.101 0.015 N 23 1 CA A VAL 274 ? ? CB A VAL 274 ? ? 1.397 1.543 -0.146 0.021 N 24 1 C A GLU 279 ? ? O A GLU 279 ? ? 1.481 1.229 0.252 0.019 N 25 1 CD1 A TYR 287 ? ? CE1 A TYR 287 ? ? 1.492 1.389 0.103 0.015 N 26 1 C A ASN 296 ? ? O A ASN 296 ? ? 1.375 1.229 0.146 0.019 N 27 1 CB A SER 298 ? ? OG A SER 298 ? ? 1.514 1.418 0.096 0.013 N 28 1 CD1 A TYR 305 ? ? CE1 A TYR 305 ? ? 1.512 1.389 0.123 0.015 N 29 1 CE2 A TYR 305 ? ? CD2 A TYR 305 ? ? 1.496 1.389 0.107 0.015 N 30 1 CE1 A PHE 308 ? ? CZ A PHE 308 ? ? 1.488 1.369 0.119 0.019 N 31 1 CB A ARG 312 ? ? CG A ARG 312 ? ? 1.691 1.521 0.170 0.027 N 32 1 CD A GLU 326 ? ? OE1 A GLU 326 ? ? 1.326 1.252 0.074 0.011 N 33 1 C A THR 332 ? ? O A THR 332 ? ? 1.373 1.229 0.144 0.019 N 34 1 CB A VAL 333 ? ? CG1 A VAL 333 ? ? 1.664 1.524 0.140 0.021 N 35 1 C A VAL 333 ? ? O A VAL 333 ? ? 1.353 1.229 0.124 0.019 N 36 1 CE2 A TYR 337 ? ? CD2 A TYR 337 ? ? 1.529 1.389 0.140 0.015 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A LEU 59 ? ? CB A LEU 59 ? ? CG A LEU 59 ? ? 134.44 115.30 19.14 2.30 N 2 1 CG A MET 164 ? ? SD A MET 164 ? ? CE A MET 164 ? ? 89.77 100.20 -10.43 1.60 N 3 1 CG A MET 185 ? ? SD A MET 185 ? ? CE A MET 185 ? ? 87.92 100.20 -12.28 1.60 N 4 1 CB A ASP 194 ? ? CG A ASP 194 ? ? OD1 A ASP 194 ? ? 126.19 118.30 7.89 0.90 N 5 1 CA A SER 224 ? ? C A SER 224 ? ? N A SER 225 ? ? 130.78 117.20 13.58 2.20 Y 6 1 C A SER 224 ? ? N A SER 225 ? ? CA A SER 225 ? ? 104.96 121.70 -16.74 2.50 Y 7 1 CG A MET 242 ? ? SD A MET 242 ? ? CE A MET 242 ? ? 88.34 100.20 -11.86 1.60 N 8 1 C A VAL 277 ? ? N A PRO 278 ? ? CA A PRO 278 ? ? 129.03 119.30 9.73 1.50 Y 9 1 CA A GLU 279 ? ? C A GLU 279 ? ? O A GLU 279 ? ? 101.61 120.10 -18.49 2.10 N 10 1 C A GLU 279 ? ? N A PRO 280 ? ? CA A PRO 280 ? ? 133.83 119.30 14.53 1.50 Y 11 1 CA A CYS 303 ? ? CB A CYS 303 ? ? SG A CYS 303 ? ? 120.89 114.20 6.69 1.10 N 12 1 CB A ASP 306 ? ? CG A ASP 306 ? ? OD2 A ASP 306 ? ? 125.33 118.30 7.03 0.90 N 13 1 NE A ARG 312 ? ? CZ A ARG 312 ? ? NH1 A ARG 312 ? ? 114.74 120.30 -5.56 0.50 N 14 1 NE A ARG 312 ? ? CZ A ARG 312 ? ? NH2 A ARG 312 ? ? 123.56 120.30 3.26 0.50 N 15 1 C A GLY 314 ? ? N A PRO 315 ? ? CA A PRO 315 ? ? 132.31 119.30 13.01 1.50 Y 16 1 NE A ARG 323 ? ? CZ A ARG 323 ? ? NH1 A ARG 323 ? ? 116.12 120.30 -4.18 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 62 ? ? -120.93 -79.35 2 1 TYR A 63 ? ? 127.39 134.62 3 1 ASP A 66 ? ? 133.62 174.71 4 1 ALA A 67 ? ? -64.53 -97.65 5 1 GLN A 69 ? ? -162.14 -145.15 6 1 LEU A 82 ? ? -170.76 109.90 7 1 ASP A 88 ? ? 75.22 34.84 8 1 THR A 100 ? ? -47.50 -13.43 9 1 ARG A 152 ? ? -141.40 -40.70 10 1 GLU A 166 ? ? -161.27 113.21 11 1 SER A 174 ? ? -179.43 139.18 12 1 GLU A 176 ? ? -9.35 98.95 13 1 GLU A 177 ? ? 86.66 -117.91 14 1 SER A 189 ? ? -53.46 109.70 15 1 ASP A 194 ? ? -149.66 46.60 16 1 THR A 197 ? ? -120.07 -164.06 17 1 ASN A 204 ? ? -153.55 75.80 18 1 SER A 224 ? ? -32.77 -89.19 19 1 ASN A 239 ? ? 70.71 39.18 20 1 PRO A 278 ? ? -81.68 -134.38 21 1 GLU A 279 ? ? 16.59 -123.11 22 1 CYS A 288 ? ? -147.95 18.44 23 1 HIS A 293 ? ? -68.90 3.13 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 ARG A 215 ? ? -11.00 2 1 PRO A 278 ? ? -10.47 3 1 GLU A 279 ? ? -10.12 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 TYR A 148 ? ? 0.063 'SIDE CHAIN' 2 1 TYR A 305 ? ? 0.087 'SIDE CHAIN' 3 1 TYR A 337 ? ? 0.071 'SIDE CHAIN' # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 S-ADENOSYL-L-HOMOCYSTEINE SAH 3 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SAH 1 1 1 SAH SAH A . C 3 HOH 1 338 2 HOH HOH A . C 3 HOH 2 339 3 HOH HOH A . C 3 HOH 3 340 4 HOH HOH A . C 3 HOH 4 341 5 HOH HOH A . C 3 HOH 5 342 6 HOH HOH A . C 3 HOH 6 343 7 HOH HOH A . C 3 HOH 7 344 8 HOH HOH A . C 3 HOH 8 345 9 HOH HOH A . C 3 HOH 9 346 10 HOH HOH A . C 3 HOH 10 347 11 HOH HOH A . C 3 HOH 11 348 12 HOH HOH A . C 3 HOH 12 349 13 HOH HOH A . C 3 HOH 13 350 14 HOH HOH A . C 3 HOH 14 351 15 HOH HOH A . C 3 HOH 15 352 16 HOH HOH A . C 3 HOH 16 353 17 HOH HOH A . C 3 HOH 17 354 18 HOH HOH A . C 3 HOH 18 355 19 HOH HOH A . C 3 HOH 19 356 20 HOH HOH A . C 3 HOH 20 357 21 HOH HOH A . C 3 HOH 21 358 22 HOH HOH A . C 3 HOH 22 359 23 HOH HOH A . C 3 HOH 23 360 24 HOH HOH A . C 3 HOH 24 361 25 HOH HOH A . C 3 HOH 25 362 26 HOH HOH A . C 3 HOH 26 363 27 HOH HOH A . C 3 HOH 27 364 28 HOH HOH A . C 3 HOH 28 365 29 HOH HOH A . C 3 HOH 29 366 30 HOH HOH A . C 3 HOH 30 367 31 HOH HOH A . C 3 HOH 31 368 32 HOH HOH A . C 3 HOH 32 369 33 HOH HOH A . C 3 HOH 33 370 34 HOH HOH A . C 3 HOH 34 371 35 HOH HOH A . C 3 HOH 35 372 36 HOH HOH A . C 3 HOH 36 373 37 HOH HOH A . C 3 HOH 37 374 38 HOH HOH A . C 3 HOH 38 375 39 HOH HOH A . C 3 HOH 39 376 40 HOH HOH A . C 3 HOH 40 377 41 HOH HOH A . C 3 HOH 41 378 42 HOH HOH A . C 3 HOH 42 379 43 HOH HOH A . C 3 HOH 43 380 44 HOH HOH A . C 3 HOH 44 381 45 HOH HOH A . C 3 HOH 45 382 46 HOH HOH A . C 3 HOH 46 383 47 HOH HOH A . C 3 HOH 47 384 48 HOH HOH A . C 3 HOH 48 385 49 HOH HOH A . C 3 HOH 49 386 50 HOH HOH A . C 3 HOH 50 387 51 HOH HOH A . C 3 HOH 51 388 52 HOH HOH A . C 3 HOH 52 389 53 HOH HOH A . C 3 HOH 53 390 54 HOH HOH A . C 3 HOH 54 391 55 HOH HOH A . C 3 HOH 55 392 56 HOH HOH A . C 3 HOH 56 393 57 HOH HOH A . C 3 HOH 57 394 58 HOH HOH A . C 3 HOH 58 395 59 HOH HOH A . C 3 HOH 59 396 60 HOH HOH A . C 3 HOH 60 397 61 HOH HOH A . C 3 HOH 61 398 62 HOH HOH A . C 3 HOH 62 399 63 HOH HOH A . C 3 HOH 63 400 64 HOH HOH A . C 3 HOH 64 401 65 HOH HOH A . C 3 HOH 65 402 66 HOH HOH A . C 3 HOH 66 403 67 HOH HOH A . C 3 HOH 67 404 68 HOH HOH A . C 3 HOH 68 405 69 HOH HOH A . C 3 HOH 69 406 70 HOH HOH A . C 3 HOH 70 407 71 HOH HOH A . C 3 HOH 71 408 72 HOH HOH A . C 3 HOH 72 409 73 HOH HOH A . C 3 HOH 73 410 74 HOH HOH A . C 3 HOH 74 411 75 HOH HOH A . C 3 HOH 75 412 76 HOH HOH A . C 3 HOH 76 413 77 HOH HOH A . C 3 HOH 77 414 78 HOH HOH A . C 3 HOH 78 415 79 HOH HOH A . C 3 HOH 79 416 80 HOH HOH A . C 3 HOH 80 417 81 HOH HOH A . C 3 HOH 81 418 82 HOH HOH A . C 3 HOH 82 419 83 HOH HOH A . C 3 HOH 83 420 84 HOH HOH A . C 3 HOH 84 421 85 HOH HOH A . C 3 HOH 85 422 86 HOH HOH A . C 3 HOH 86 423 87 HOH HOH A . C 3 HOH 87 424 88 HOH HOH A . C 3 HOH 88 425 89 HOH HOH A . C 3 HOH 89 426 90 HOH HOH A . C 3 HOH 90 427 91 HOH HOH A . C 3 HOH 91 428 92 HOH HOH A . C 3 HOH 92 429 93 HOH HOH A . C 3 HOH 93 430 94 HOH HOH A . C 3 HOH 94 431 95 HOH HOH A . C 3 HOH 95 432 96 HOH HOH A . C 3 HOH 96 433 97 HOH HOH A . C 3 HOH 97 434 98 HOH HOH A . C 3 HOH 98 435 99 HOH HOH A . C 3 HOH 99 436 100 HOH HOH A . C 3 HOH 100 437 101 HOH HOH A . C 3 HOH 101 438 102 HOH HOH A . C 3 HOH 102 439 103 HOH HOH A . C 3 HOH 103 440 104 HOH HOH A . C 3 HOH 104 441 105 HOH HOH A . C 3 HOH 105 442 106 HOH HOH A . C 3 HOH 106 443 107 HOH HOH A . C 3 HOH 107 444 108 HOH HOH A . C 3 HOH 108 445 109 HOH HOH A . C 3 HOH 109 446 110 HOH HOH A . C 3 HOH 110 447 111 HOH HOH A . C 3 HOH 111 448 112 HOH HOH A . C 3 HOH 112 449 113 HOH HOH A . C 3 HOH 113 450 114 HOH HOH A . C 3 HOH 114 451 115 HOH HOH A . C 3 HOH 115 452 116 HOH HOH A . C 3 HOH 116 453 117 HOH HOH A . C 3 HOH 117 454 118 HOH HOH A . C 3 HOH 118 455 119 HOH HOH A . C 3 HOH 119 456 120 HOH HOH A . C 3 HOH 120 457 121 HOH HOH A . C 3 HOH 121 458 122 HOH HOH A . C 3 HOH 122 459 123 HOH HOH A . C 3 HOH 123 460 124 HOH HOH A . C 3 HOH 124 461 125 HOH HOH A . C 3 HOH 125 462 126 HOH HOH A . C 3 HOH 126 463 127 HOH HOH A . C 3 HOH 127 464 128 HOH HOH A . C 3 HOH 128 465 129 HOH HOH A . C 3 HOH 129 466 130 HOH HOH A . C 3 HOH 130 467 131 HOH HOH A . C 3 HOH 131 468 132 HOH HOH A . C 3 HOH 132 469 133 HOH HOH A . C 3 HOH 133 470 134 HOH HOH A . C 3 HOH 134 471 135 HOH HOH A . C 3 HOH 135 472 136 HOH HOH A . C 3 HOH 136 473 137 HOH HOH A . C 3 HOH 137 474 138 HOH HOH A . C 3 HOH 138 475 139 HOH HOH A . C 3 HOH 139 476 140 HOH HOH A . C 3 HOH 140 477 141 HOH HOH A . C 3 HOH 141 478 142 HOH HOH A . C 3 HOH 142 479 143 HOH HOH A . C 3 HOH 143 480 144 HOH HOH A . C 3 HOH 144 481 145 HOH HOH A . C 3 HOH 145 482 146 HOH HOH A . C 3 HOH 146 483 147 HOH HOH A . C 3 HOH 147 484 148 HOH HOH A . C 3 HOH 148 485 149 HOH HOH A . C 3 HOH 149 486 150 HOH HOH A . C 3 HOH 150 487 151 HOH HOH A . C 3 HOH 151 488 152 HOH HOH A . C 3 HOH 152 489 153 HOH HOH A . C 3 HOH 153 490 154 HOH HOH A . C 3 HOH 154 491 155 HOH HOH A . C 3 HOH 155 492 156 HOH HOH A . C 3 HOH 156 493 157 HOH HOH A . C 3 HOH 157 494 158 HOH HOH A . C 3 HOH 158 495 159 HOH HOH A . C 3 HOH 159 496 160 HOH HOH A . C 3 HOH 160 497 161 HOH HOH A . C 3 HOH 161 498 162 HOH HOH A . C 3 HOH 162 499 163 HOH HOH A . C 3 HOH 163 500 164 HOH HOH A . C 3 HOH 164 501 165 HOH HOH A . C 3 HOH 165 502 166 HOH HOH A . C 3 HOH 166 503 167 HOH HOH A . C 3 HOH 167 504 168 HOH HOH A . C 3 HOH 168 505 169 HOH HOH A . C 3 HOH 169 506 170 HOH HOH A . C 3 HOH 170 507 171 HOH HOH A . C 3 HOH 171 508 172 HOH HOH A . #