data_1MV7 # _entry.id 1MV7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1MV7 NDB BD0058 RCSB RCSB017211 WWPDB D_1000017211 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2004-05-25 _pdbx_database_PDB_obs_spr.pdb_id 1SM5 _pdbx_database_PDB_obs_spr.replace_pdb_id 1MV7 _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 1MV7 _pdbx_database_status.recvd_initial_deposition_date 2002-09-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Park, H.' 1 'Zhang, K.' 2 'Ren, Y.' 3 'Nadji, S.' 4 'Sinha, N.' 5 'Taylor, J.-S.' 6 'Kang, C.' 7 # _citation.id primary _citation.title 'Crystal Structure of a DNA Decamer Containing a cys-syn Thymine-dimer' _citation.journal_abbrev Proc.Nat.Acad.Sci.USA _citation.journal_volume 99 _citation.page_first 15965 _citation.page_last 15970 _citation.year 2002 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12456887 _citation.pdbx_database_id_DOI 10.1073/pnas.242422699 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Park, H.' 1 primary 'Zhang, K.' 2 primary 'Ren, Y.' 3 primary 'Nadji, S.' 4 primary 'Sinha, N.' 5 primary 'Taylor, J.-S.' 6 primary 'Kang, C.' 7 # _cell.entry_id 1MV7 _cell.length_a 24.50 _cell.length_b 53.85 _cell.length_c 75.33 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MV7 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*GP*CP*(BRO)UP*TP*AP*AP*TP*(BRO)UP*CP*G)-3'" 3006.950 2 ? ? ? ? 2 polymer syn "5'-D(*CP*GP*AP*AP*TP*TP*AP*AP*GP*C)-3'" 3053.031 2 ? ? ? ? 3 non-polymer syn 'BROMO GROUP' 79.904 4 ? ? ? ? 4 water nat water 18.015 52 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DG)(DC)(DU)(DT)(DA)(DA)(DT)(DU)(DC)(DG)' GCUTAATUCG A,C ? 2 polydeoxyribonucleotide no no '(DC)(DG)(DA)(DA)(DT)(DT)(DA)(DA)(DG)(DC)' CGAATTAAGC B,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DU n 1 4 DT n 1 5 DA n 1 6 DA n 1 7 DT n 1 8 DU n 1 9 DC n 1 10 DG n 2 1 DC n 2 2 DG n 2 3 DA n 2 4 DA n 2 5 DT n 2 6 DT n 2 7 DA n 2 8 DA n 2 9 DG n 2 10 DC n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight +U non-polymer . 'UNKNOWN LIGAND' ? ? ? A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 BRO non-polymer . 'BROMO GROUP' ? Br 79.904 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 DU 'DNA linking' y "2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O8 P' 308.182 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 T 'DNA linking' . "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # _exptl.entry_id 1MV7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.05 _exptl_crystal.density_percent_sol 40.00 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'MgCl2, HEPES-Na, PEG 400, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 MgCl2 ? ? ? 1 2 1 HEPES-Na ? ? ? 1 3 1 'PEG 400' ? ? ? 1 4 2 MgCl2 ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUN-315' _diffrn_detector.pdbx_collection_date 2001-12-03 _diffrn_detector.details 'double crystal monochromator' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9205 1.0 2 0.8434 1.0 3 0.9207 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE 9-2' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline 9-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9205, 0.8434, 0.9207' # _reflns.entry_id 1MV7 _reflns.observed_criterion_sigma_F 1 _reflns.observed_criterion_sigma_I 1 _reflns.d_resolution_high 1.9 _reflns.d_resolution_low 50 _reflns.number_all 8060 _reflns.number_obs 7865 _reflns.percent_possible_obs 97.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_netI_over_sigmaI ? # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.93 _reflns_shell.percent_possible_all 97.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1MV7 _refine.ls_d_res_high 2.0 _refine.ls_d_res_low 10 _refine.pdbx_ls_sigma_F 2 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 6819 _refine.ls_number_reflns_obs 6447 _refine.ls_number_reflns_R_free 372 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.198 _refine.ls_R_factor_R_free 0.254 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free 5 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 804 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 52 _refine_hist.number_atoms_total 860 _refine_hist.d_res_high 2.0 _refine_hist.d_res_low 10 _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_angle_deg 1.35 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d 0.023 ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all . 2.0 2.09 . 0.254 . 0.301 . . 19 . 'X-RAY DIFFRACTION' . . . 2.09 2.20 . 0.254 . 0.301 . . 25 . 'X-RAY DIFFRACTION' . . # _struct.entry_id 1MV7 _struct.title 'Crystal Structure of a DNA Decamer Containing a Thymine-dimer' _struct.pdbx_descriptor "5'-D(*GP*CP*(BRO)UP*TP*AP*AP*TP*(BRO)UP*CP*G)-3'" _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1MV7 _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'UV-damaged DNA, Thymine dimer, DNA decamer, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 4 ? # loop_ _struct_biol.id _struct_biol.details _struct_biol.pdbx_parent_biol_id 1 . ? 2 ? ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? E BRO . BR ? ? ? 1_555 A +U 3 C5 ? ? A BRO 3 A +U 3 1_555 ? ? ? ? ? ? ? 1.937 ? covale2 covale ? ? F BRO . BR ? ? ? 1_555 A +U 8 C5 ? ? A BRO 8 A +U 8 1_555 ? ? ? ? ? ? ? 1.933 ? covale3 covale ? ? B T 5 C5 ? ? ? 1_555 B T 6 C5 ? ? B T 15 B T 16 1_555 ? ? ? ? ? ? ? 1.510 ? covale4 covale ? ? B T 5 C6 ? ? ? 1_555 B T 6 C6 ? ? B T 15 B T 16 1_555 ? ? ? ? ? ? ? 1.551 ? covale5 covale ? ? D T 5 C5 ? ? ? 1_555 D T 6 C5 ? ? D T 115 D T 116 1_555 ? ? ? ? ? ? ? 1.523 ? covale6 covale ? ? D T 5 C6 ? ? ? 1_555 D T 6 C6 ? ? D T 115 D T 116 1_555 ? ? ? ? ? ? ? 1.554 ? covale7 covale ? ? G BRO . BR ? ? ? 1_555 C +U 3 C5 ? ? C BRO 103 C +U 103 1_555 ? ? ? ? ? ? ? 1.810 ? covale8 covale ? ? H BRO . BR ? ? ? 1_555 C +U 8 C5 ? ? C BRO 108 C +U 108 1_555 ? ? ? ? ? ? ? 1.890 ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 B C 10 N3 ? ? A G 1 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 B C 10 O2 ? ? A G 1 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 B C 10 N4 ? ? A G 1 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? A C 2 N3 ? ? ? 1_555 B G 9 N1 ? ? A C 2 B G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? A C 2 N4 ? ? ? 1_555 B G 9 O6 ? ? A C 2 B G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? A C 2 O2 ? ? ? 1_555 B G 9 N2 ? ? A C 2 B G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? A T 4 N3 ? ? ? 1_555 B A 7 N1 ? ? A T 4 B A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? A T 4 O4 ? ? ? 1_555 B A 7 N6 ? ? A T 4 B A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? A A 5 N1 ? ? ? 1_555 B T 6 N3 ? ? A A 5 B T 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? A A 5 N6 ? ? ? 1_555 B T 6 O4 ? ? A A 5 B T 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? A A 6 N1 ? ? ? 1_555 B T 5 N3 ? ? A A 6 B T 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? A A 6 N6 ? ? ? 1_555 B T 5 O4 ? ? A A 6 B T 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? A T 7 N3 ? ? ? 1_555 B A 4 N1 ? ? A T 7 B A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? A T 7 O4 ? ? ? 1_555 B A 4 N6 ? ? A T 7 B A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? A C 9 N3 ? ? ? 1_555 B G 2 N1 ? ? A C 9 B G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? A C 9 N4 ? ? ? 1_555 B G 2 O6 ? ? A C 9 B G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? A C 9 O2 ? ? ? 1_555 B G 2 N2 ? ? A C 9 B G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? A G 10 N1 ? ? ? 1_555 B C 1 N3 ? ? A G 10 B C 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? A G 10 N2 ? ? ? 1_555 B C 1 O2 ? ? A G 10 B C 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? A G 10 O6 ? ? ? 1_555 B C 1 N4 ? ? A G 10 B C 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? C G 1 N1 ? ? ? 1_555 D C 10 N3 ? ? C G 101 D C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? C G 1 N2 ? ? ? 1_555 D C 10 O2 ? ? C G 101 D C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? C G 1 O6 ? ? ? 1_555 D C 10 N4 ? ? C G 101 D C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? C C 2 N3 ? ? ? 1_555 D G 9 N1 ? ? C C 102 D G 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog25 hydrog ? ? C C 2 N4 ? ? ? 1_555 D G 9 O6 ? ? C C 102 D G 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog26 hydrog ? ? C C 2 O2 ? ? ? 1_555 D G 9 N2 ? ? C C 102 D G 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog27 hydrog ? ? C T 4 N3 ? ? ? 1_555 D A 7 N1 ? ? C T 104 D A 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog28 hydrog ? ? C T 4 O4 ? ? ? 1_555 D A 7 N6 ? ? C T 104 D A 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog29 hydrog ? ? C A 5 N1 ? ? ? 1_555 D T 6 N3 ? ? C A 105 D T 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog30 hydrog ? ? C A 5 N6 ? ? ? 1_555 D T 6 O4 ? ? C A 105 D T 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog31 hydrog ? ? C A 6 N1 ? ? ? 1_555 D T 5 N3 ? ? C A 106 D T 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog32 hydrog ? ? C A 6 N6 ? ? ? 1_555 D T 5 O4 ? ? C A 106 D T 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog33 hydrog ? ? C T 7 N3 ? ? ? 1_555 D A 4 N1 ? ? C T 107 D A 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog34 hydrog ? ? C T 7 O4 ? ? ? 1_555 D A 4 N6 ? ? C T 107 D A 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog35 hydrog ? ? C C 9 N3 ? ? ? 1_555 D G 2 N1 ? ? C C 109 D G 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog36 hydrog ? ? C C 9 N4 ? ? ? 1_555 D G 2 O6 ? ? C C 109 D G 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog37 hydrog ? ? C C 9 O2 ? ? ? 1_555 D G 2 N2 ? ? C C 109 D G 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog38 hydrog ? ? C G 10 N1 ? ? ? 1_555 D C 1 N3 ? ? C G 110 D C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog39 hydrog ? ? C G 10 N2 ? ? ? 1_555 D C 1 O2 ? ? C G 110 D C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog40 hydrog ? ? C G 10 O6 ? ? ? 1_555 D C 1 N4 ? ? C G 110 D C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _database_PDB_matrix.entry_id 1MV7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1MV7 _atom_sites.fract_transf_matrix[1][1] 0.040816 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018570 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013275 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C N O P # loop_ # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 G G A . n A 1 2 DC 2 2 2 C C A . n A 1 3 DU 3 3 3 +U +U A . n A 1 4 DT 4 4 4 T T A . n A 1 5 DA 5 5 5 A A A . n A 1 6 DA 6 6 6 A A A . n A 1 7 DT 7 7 7 T T A . n A 1 8 DU 8 8 8 +U +U A . n A 1 9 DC 9 9 9 C C A . n A 1 10 DG 10 10 10 G G A . n B 2 1 DC 1 11 11 C C B . n B 2 2 DG 2 12 12 G G B . n B 2 3 DA 3 13 13 A A B . n B 2 4 DA 4 14 14 A A B . n B 2 5 DT 5 15 15 T T B . n B 2 6 DT 6 16 16 T T B . n B 2 7 DA 7 17 17 A A B . n B 2 8 DA 8 18 18 A A B . n B 2 9 DG 9 19 19 G G B . n B 2 10 DC 10 20 20 C C B . n C 1 1 DG 1 101 101 G G C . n C 1 2 DC 2 102 102 C C C . n C 1 3 DU 3 103 103 +U +U C . n C 1 4 DT 4 104 104 T T C . n C 1 5 DA 5 105 105 A A C . n C 1 6 DA 6 106 106 A A C . n C 1 7 DT 7 107 107 T T C . n C 1 8 DU 8 108 108 +U +U C . n C 1 9 DC 9 109 109 C C C . n C 1 10 DG 10 110 110 G G C . n D 2 1 DC 1 111 111 C C D . n D 2 2 DG 2 112 112 G G D . n D 2 3 DA 3 113 113 A A D . n D 2 4 DA 4 114 114 A A D . n D 2 5 DT 5 115 115 T T D . n D 2 6 DT 6 116 116 T T D . n D 2 7 DA 7 117 117 A A D . n D 2 8 DA 8 118 118 A A D . n D 2 9 DG 9 119 119 G G D . n D 2 10 DC 10 120 120 C C D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 BRO 1 3 3 BRO +U A . F 3 BRO 1 8 8 BRO +U A . G 3 BRO 1 103 103 BRO BRO C . H 3 BRO 1 108 108 BRO +U C . I 4 HOH 1 201 201 HOH HOH ? . I 4 HOH 2 202 202 HOH HOH ? . I 4 HOH 3 203 203 HOH HOH ? . I 4 HOH 4 204 204 HOH HOH ? . I 4 HOH 5 205 205 HOH HOH ? . I 4 HOH 6 206 206 HOH HOH ? . I 4 HOH 7 207 207 HOH HOH ? . I 4 HOH 8 208 208 HOH HOH ? . I 4 HOH 9 209 209 HOH HOH ? . I 4 HOH 10 210 210 HOH HOH ? . I 4 HOH 11 211 211 HOH HOH ? . I 4 HOH 12 212 212 HOH HOH ? . I 4 HOH 13 213 213 HOH HOH ? . I 4 HOH 14 214 214 HOH HOH ? . I 4 HOH 15 215 215 HOH HOH ? . I 4 HOH 16 216 216 HOH HOH ? . I 4 HOH 17 217 217 HOH HOH ? . I 4 HOH 18 218 218 HOH HOH ? . I 4 HOH 19 219 219 HOH HOH ? . I 4 HOH 20 220 220 HOH HOH ? . I 4 HOH 21 221 221 HOH HOH ? . I 4 HOH 22 222 222 HOH HOH ? . I 4 HOH 23 223 223 HOH HOH ? . I 4 HOH 24 224 224 HOH HOH ? . I 4 HOH 25 225 225 HOH HOH ? . I 4 HOH 26 226 226 HOH HOH ? . I 4 HOH 27 227 227 HOH HOH ? . I 4 HOH 28 228 228 HOH HOH ? . I 4 HOH 29 229 229 HOH HOH ? . I 4 HOH 30 230 230 HOH HOH ? . I 4 HOH 31 231 231 HOH HOH ? . I 4 HOH 32 232 232 HOH HOH ? . I 4 HOH 33 233 233 HOH HOH ? . I 4 HOH 34 234 234 HOH HOH ? . I 4 HOH 35 235 235 HOH HOH ? . I 4 HOH 36 236 236 HOH HOH ? . I 4 HOH 37 237 237 HOH HOH ? . I 4 HOH 38 238 238 HOH HOH ? . I 4 HOH 39 239 239 HOH HOH ? . I 4 HOH 40 240 240 HOH HOH ? . I 4 HOH 41 241 241 HOH HOH ? . I 4 HOH 42 242 242 HOH HOH ? . I 4 HOH 43 243 243 HOH HOH ? . I 4 HOH 44 244 244 HOH HOH ? . I 4 HOH 45 245 245 HOH HOH ? . I 4 HOH 46 246 246 HOH HOH ? . I 4 HOH 47 247 247 HOH HOH ? . I 4 HOH 48 248 248 HOH HOH ? . I 4 HOH 49 249 249 HOH HOH ? . I 4 HOH 50 250 250 HOH HOH ? . I 4 HOH 51 251 251 HOH HOH ? . I 4 HOH 52 252 252 HOH HOH ? . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-12-13 2 'Structure model' 1 1 2004-05-25 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data collection' . ? 1 SCALEPACK 'data reduction' . ? 2 SOLVE 'model building' . ? 3 X-PLOR refinement 3.851 ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O3* D A 113 ? ? P D A 114 ? ? 1.52 2 1 O3* A A 5 ? ? P A A 6 ? ? 1.54 3 1 O3* B C 11 ? ? P B G 12 ? ? 1.56 4 1 O3* D A 114 ? ? P D T 115 ? ? 1.56 5 1 O3* C G 101 ? ? P C C 102 ? ? 1.57 6 1 O3* C +U 108 ? ? P C C 109 ? ? 1.57 7 1 O3* A T 4 ? ? P A A 5 ? ? 1.58 8 1 O3* A C 2 ? ? P A +U 3 ? ? 1.58 9 1 O3* B A 18 ? ? P B G 19 ? ? 1.58 10 1 O3* A +U 8 ? ? P A C 9 ? ? 1.59 11 1 O3* D G 119 ? ? P D C 120 ? ? 1.59 12 1 O3* D T 115 ? ? P D T 116 ? ? 1.59 13 1 O3* B T 15 ? ? P B T 16 ? ? 1.59 14 1 O3* B G 12 ? ? P B A 13 ? ? 1.59 15 1 O3* A +U 3 ? ? P A T 4 ? ? 1.59 16 1 O3* B A 17 ? ? P B A 18 ? ? 1.59 17 1 O3* D C 111 ? ? P D G 112 ? ? 1.59 18 1 O3* C A 106 ? ? P C T 107 ? ? 1.60 19 1 O3* C A 105 ? ? P C A 106 ? ? 1.60 20 1 O3* D G 112 ? ? P D A 113 ? ? 1.60 21 1 O3* C C 102 ? ? P C +U 103 ? ? 1.60 22 1 O3* A A 6 ? ? P A T 7 ? ? 1.61 23 1 O3* C T 104 ? ? P C A 105 ? ? 1.61 24 1 O3* B T 16 ? ? P B A 17 ? ? 1.61 25 1 O3* A T 7 ? ? P A +U 8 ? ? 1.61 26 1 O3* B A 13 ? ? P B A 14 ? ? 1.62 27 1 O3* D A 118 ? ? P D G 119 ? ? 1.62 28 1 O3* D A 117 ? ? P D A 118 ? ? 1.62 29 1 O3* C +U 103 ? ? P C T 104 ? ? 1.63 30 1 O3* C C 109 ? ? P C G 110 ? ? 1.63 31 1 O3* A G 1 ? ? P A C 2 ? ? 1.63 32 1 O3* B G 19 ? ? P B C 20 ? ? 1.63 33 1 O3* C T 107 ? ? P C +U 108 ? ? 1.63 34 1 O3* A C 9 ? ? P A G 10 ? ? 1.64 35 1 O3* B A 14 ? ? P B T 15 ? ? 1.65 36 1 O3* D T 116 ? ? P D A 117 ? ? 1.65 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 N3 A A 6 ? ? C4 A A 6 ? ? 1.384 1.344 0.040 0.006 N 2 1 C8 A A 6 ? ? N9 A A 6 ? ? 1.321 1.373 -0.052 0.008 N 3 1 N7 A G 10 ? ? C8 A G 10 ? ? 1.264 1.305 -0.041 0.006 N 4 1 N1 B C 11 ? ? C2 B C 11 ? ? 1.311 1.397 -0.086 0.010 N 5 1 C2 B C 11 ? ? N3 B C 11 ? ? 1.300 1.353 -0.053 0.008 N 6 1 N1 B G 12 ? ? C2 B G 12 ? ? 1.318 1.373 -0.055 0.008 N 7 1 N3 B G 12 ? ? C4 B G 12 ? ? 1.307 1.350 -0.043 0.007 N 8 1 C4 B G 12 ? ? C5 B G 12 ? ? 1.334 1.379 -0.045 0.007 N 9 1 C6 B G 12 ? ? N1 B G 12 ? ? 1.345 1.391 -0.046 0.007 N 10 1 C4 B A 13 ? ? C5 B A 13 ? ? 1.338 1.383 -0.045 0.007 N 11 1 C6 B A 13 ? ? N1 B A 13 ? ? 1.286 1.351 -0.065 0.007 N 12 1 N9 B A 13 ? ? C4 B A 13 ? ? 1.419 1.374 0.045 0.006 N 13 1 N9 B A 14 ? ? C4 B A 14 ? ? 1.322 1.374 -0.052 0.006 N 14 1 C2 B T 15 ? ? N3 B T 15 ? ? 1.313 1.373 -0.060 0.008 N 15 1 C2 B T 16 ? ? N3 B T 16 ? ? 1.321 1.373 -0.052 0.008 N 16 1 C5 B T 16 ? ? C6 B T 16 ? ? 1.296 1.339 -0.043 0.007 N 17 1 C4 B A 18 ? ? C5 B A 18 ? ? 1.340 1.383 -0.043 0.007 N 18 1 C6 B A 18 ? ? N1 B A 18 ? ? 1.297 1.351 -0.054 0.007 N 19 1 C2 D T 115 ? ? N3 D T 115 ? ? 1.314 1.373 -0.059 0.008 N 20 1 C8 D G 119 ? ? N9 D G 119 ? ? 1.312 1.374 -0.062 0.007 N 21 1 N1 D C 120 ? ? C6 D C 120 ? ? 1.310 1.367 -0.057 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N7 A G 1 ? ? C8 A G 1 ? ? N9 A G 1 ? ? 116.44 113.10 3.34 0.50 N 2 1 C8 A G 1 ? ? N9 A G 1 ? ? C4 A G 1 ? ? 102.54 106.40 -3.86 0.40 N 3 1 N9 A G 1 ? ? C4 A G 1 ? ? C5 A G 1 ? ? 108.08 105.40 2.68 0.40 N 4 1 N1 A C 9 ? ? C2 A C 9 ? ? O2 A C 9 ? ? 123.60 118.90 4.70 0.60 N 5 1 C2 A G 10 ? ? N3 A G 10 ? ? C4 A G 10 ? ? 116.12 111.90 4.22 0.50 N 6 1 N1 B C 11 ? ? C2 B C 11 ? ? O2 B C 11 ? ? 123.31 118.90 4.41 0.60 N 7 1 N3 B C 11 ? ? C2 B C 11 ? ? O2 B C 11 ? ? 115.24 121.90 -6.66 0.70 N 8 1 C2 B G 12 ? ? N3 B G 12 ? ? C4 B G 12 ? ? 115.32 111.90 3.42 0.50 N 9 1 N3 B G 12 ? ? C2 B G 12 ? ? N2 B G 12 ? ? 124.40 119.90 4.50 0.70 N 10 1 C5 B A 13 ? ? N7 B A 13 ? ? C8 B A 13 ? ? 107.47 103.90 3.57 0.50 N 11 1 N7 B A 13 ? ? C8 B A 13 ? ? N9 B A 13 ? ? 110.24 113.80 -3.56 0.50 N 12 1 N1 B A 14 ? ? C2 B A 14 ? ? N3 B A 14 ? ? 126.21 129.30 -3.09 0.50 N 13 1 C5 B A 14 ? ? N7 B A 14 ? ? C8 B A 14 ? ? 99.83 103.90 -4.07 0.50 N 14 1 N7 B A 14 ? ? C8 B A 14 ? ? N9 B A 14 ? ? 117.91 113.80 4.11 0.50 N 15 1 C5 B T 15 ? ? C6 B T 15 ? ? N1 B T 15 ? ? 117.69 123.70 -6.01 0.60 N 16 1 N1 B T 16 ? ? C2 B T 16 ? ? N3 B T 16 ? ? 118.26 114.60 3.66 0.60 N 17 1 N3 B T 16 ? ? C2 B T 16 ? ? O2 B T 16 ? ? 118.41 122.30 -3.89 0.60 N 18 1 N3 B T 16 ? ? C4 B T 16 ? ? O4 B T 16 ? ? 114.47 119.90 -5.43 0.60 N 19 1 C5 B T 16 ? ? C4 B T 16 ? ? O4 B T 16 ? ? 130.10 124.90 5.20 0.70 N 20 1 C5 C G 101 ? ? C6 C G 101 ? ? N1 C G 101 ? ? 114.86 111.50 3.36 0.50 N 21 1 N3 C G 110 ? ? C4 C G 110 ? ? C5 C G 110 ? ? 125.54 128.60 -3.06 0.50 N 22 1 C4 C G 110 ? ? C5 C G 110 ? ? N7 C G 110 ? ? 107.78 110.80 -3.02 0.40 N 23 1 C8 C G 110 ? ? N9 C G 110 ? ? C4 C G 110 ? ? 102.80 106.40 -3.60 0.40 N 24 1 N9 C G 110 ? ? C4 C G 110 ? ? C5 C G 110 ? ? 108.70 105.40 3.30 0.40 N 25 1 C5 C G 110 ? ? C6 C G 110 ? ? O6 C G 110 ? ? 132.43 128.60 3.83 0.60 N 26 1 C5 D T 115 ? ? C6 D T 115 ? ? N1 D T 115 ? ? 118.24 123.70 -5.46 0.60 N 27 1 N1 D T 116 ? ? C2 D T 116 ? ? N3 D T 116 ? ? 118.73 114.60 4.13 0.60 N 28 1 N3 D T 116 ? ? C4 D T 116 ? ? O4 D T 116 ? ? 114.54 119.90 -5.36 0.60 N 29 1 C5 D T 116 ? ? C4 D T 116 ? ? O4 D T 116 ? ? 130.26 124.90 5.36 0.70 N 30 1 N1 D G 119 ? ? C6 D G 119 ? ? O6 D G 119 ? ? 114.13 119.90 -5.77 0.60 N 31 1 C5 D G 119 ? ? C6 D G 119 ? ? O6 D G 119 ? ? 132.64 128.60 4.04 0.60 N 32 1 N1 D C 120 ? ? C2 D C 120 ? ? O2 D C 120 ? ? 122.57 118.90 3.67 0.60 N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A DG 1 ? "O5'" ? A DG 1 "O5'" 2 1 Y 1 A DG 1 ? "C5'" ? A DG 1 "C5'" 3 1 Y 1 A DG 1 ? "C4'" ? A DG 1 "C4'" 4 1 Y 1 A DG 1 ? "O4'" ? A DG 1 "O4'" 5 1 Y 1 A DG 1 ? "C3'" ? A DG 1 "C3'" 6 1 Y 1 A DG 1 ? "O3'" ? A DG 1 "O3'" 7 1 Y 1 A DG 1 ? "C2'" ? A DG 1 "C2'" 8 1 Y 1 A DG 1 ? "O2'" ? A DG 1 "O2'" 9 1 Y 1 A DG 1 ? "C1'" ? A DG 1 "C1'" 10 1 Y 1 A DC 2 ? OP1 ? A DC 2 OP1 11 1 Y 1 A DC 2 ? OP2 ? A DC 2 OP2 12 1 Y 1 A DC 2 ? "O5'" ? A DC 2 "O5'" 13 1 Y 1 A DC 2 ? "C5'" ? A DC 2 "C5'" 14 1 Y 1 A DC 2 ? "C4'" ? A DC 2 "C4'" 15 1 Y 1 A DC 2 ? "O4'" ? A DC 2 "O4'" 16 1 Y 1 A DC 2 ? "C3'" ? A DC 2 "C3'" 17 1 Y 1 A DC 2 ? "O3'" ? A DC 2 "O3'" 18 1 Y 1 A DC 2 ? "C2'" ? A DC 2 "C2'" 19 1 Y 1 A DC 2 ? "O2'" ? A DC 2 "O2'" 20 1 Y 1 A DC 2 ? "C1'" ? A DC 2 "C1'" 21 1 Y 1 A DT 4 ? OP1 ? A DT 4 OP1 22 1 Y 1 A DT 4 ? OP2 ? A DT 4 OP2 23 1 Y 1 A DT 4 ? "O5'" ? A DT 4 "O5'" 24 1 Y 1 A DT 4 ? "C5'" ? A DT 4 "C5'" 25 1 Y 1 A DT 4 ? "C4'" ? A DT 4 "C4'" 26 1 Y 1 A DT 4 ? "O4'" ? A DT 4 "O4'" 27 1 Y 1 A DT 4 ? "C3'" ? A DT 4 "C3'" 28 1 Y 1 A DT 4 ? "O3'" ? A DT 4 "O3'" 29 1 Y 1 A DT 4 ? "C2'" ? A DT 4 "C2'" 30 1 Y 1 A DT 4 ? "C1'" ? A DT 4 "C1'" 31 1 Y 1 A DT 4 ? C7 ? A DT 4 C7 32 1 Y 1 A DA 5 ? OP1 ? A DA 5 OP1 33 1 Y 1 A DA 5 ? OP2 ? A DA 5 OP2 34 1 Y 1 A DA 5 ? "O5'" ? A DA 5 "O5'" 35 1 Y 1 A DA 5 ? "C5'" ? A DA 5 "C5'" 36 1 Y 1 A DA 5 ? "C4'" ? A DA 5 "C4'" 37 1 Y 1 A DA 5 ? "O4'" ? A DA 5 "O4'" 38 1 Y 1 A DA 5 ? "C3'" ? A DA 5 "C3'" 39 1 Y 1 A DA 5 ? "O3'" ? A DA 5 "O3'" 40 1 Y 1 A DA 5 ? "C2'" ? A DA 5 "C2'" 41 1 Y 1 A DA 5 ? "O2'" ? A DA 5 "O2'" 42 1 Y 1 A DA 5 ? "C1'" ? A DA 5 "C1'" 43 1 Y 1 A DA 6 ? OP1 ? A DA 6 OP1 44 1 Y 1 A DA 6 ? OP2 ? A DA 6 OP2 45 1 Y 1 A DA 6 ? "O5'" ? A DA 6 "O5'" 46 1 Y 1 A DA 6 ? "C5'" ? A DA 6 "C5'" 47 1 Y 1 A DA 6 ? "C4'" ? A DA 6 "C4'" 48 1 Y 1 A DA 6 ? "O4'" ? A DA 6 "O4'" 49 1 Y 1 A DA 6 ? "C3'" ? A DA 6 "C3'" 50 1 Y 1 A DA 6 ? "O3'" ? A DA 6 "O3'" 51 1 Y 1 A DA 6 ? "C2'" ? A DA 6 "C2'" 52 1 Y 1 A DA 6 ? "O2'" ? A DA 6 "O2'" 53 1 Y 1 A DA 6 ? "C1'" ? A DA 6 "C1'" 54 1 Y 1 A DT 7 ? OP1 ? A DT 7 OP1 55 1 Y 1 A DT 7 ? OP2 ? A DT 7 OP2 56 1 Y 1 A DT 7 ? "O5'" ? A DT 7 "O5'" 57 1 Y 1 A DT 7 ? "C5'" ? A DT 7 "C5'" 58 1 Y 1 A DT 7 ? "C4'" ? A DT 7 "C4'" 59 1 Y 1 A DT 7 ? "O4'" ? A DT 7 "O4'" 60 1 Y 1 A DT 7 ? "C3'" ? A DT 7 "C3'" 61 1 Y 1 A DT 7 ? "O3'" ? A DT 7 "O3'" 62 1 Y 1 A DT 7 ? "C2'" ? A DT 7 "C2'" 63 1 Y 1 A DT 7 ? "C1'" ? A DT 7 "C1'" 64 1 Y 1 A DT 7 ? C7 ? A DT 7 C7 65 1 Y 1 A DC 9 ? OP1 ? A DC 9 OP1 66 1 Y 1 A DC 9 ? OP2 ? A DC 9 OP2 67 1 Y 1 A DC 9 ? "O5'" ? A DC 9 "O5'" 68 1 Y 1 A DC 9 ? "C5'" ? A DC 9 "C5'" 69 1 Y 1 A DC 9 ? "C4'" ? A DC 9 "C4'" 70 1 Y 1 A DC 9 ? "O4'" ? A DC 9 "O4'" 71 1 Y 1 A DC 9 ? "C3'" ? A DC 9 "C3'" 72 1 Y 1 A DC 9 ? "O3'" ? A DC 9 "O3'" 73 1 Y 1 A DC 9 ? "C2'" ? A DC 9 "C2'" 74 1 Y 1 A DC 9 ? "O2'" ? A DC 9 "O2'" 75 1 Y 1 A DC 9 ? "C1'" ? A DC 9 "C1'" 76 1 Y 1 A DG 10 ? OP1 ? A DG 10 OP1 77 1 Y 1 A DG 10 ? OP2 ? A DG 10 OP2 78 1 Y 1 A DG 10 ? "O5'" ? A DG 10 "O5'" 79 1 Y 1 A DG 10 ? "C5'" ? A DG 10 "C5'" 80 1 Y 1 A DG 10 ? "C4'" ? A DG 10 "C4'" 81 1 Y 1 A DG 10 ? "O4'" ? A DG 10 "O4'" 82 1 Y 1 A DG 10 ? "C3'" ? A DG 10 "C3'" 83 1 Y 1 A DG 10 ? "O3'" ? A DG 10 "O3'" 84 1 Y 1 A DG 10 ? "C2'" ? A DG 10 "C2'" 85 1 Y 1 A DG 10 ? "O2'" ? A DG 10 "O2'" 86 1 Y 1 A DG 10 ? "C1'" ? A DG 10 "C1'" 87 1 Y 1 B DC 11 ? "O5'" ? B DC 1 "O5'" 88 1 Y 1 B DC 11 ? "C5'" ? B DC 1 "C5'" 89 1 Y 1 B DC 11 ? "C4'" ? B DC 1 "C4'" 90 1 Y 1 B DC 11 ? "O4'" ? B DC 1 "O4'" 91 1 Y 1 B DC 11 ? "C3'" ? B DC 1 "C3'" 92 1 Y 1 B DC 11 ? "O3'" ? B DC 1 "O3'" 93 1 Y 1 B DC 11 ? "C2'" ? B DC 1 "C2'" 94 1 Y 1 B DC 11 ? "O2'" ? B DC 1 "O2'" 95 1 Y 1 B DC 11 ? "C1'" ? B DC 1 "C1'" 96 1 Y 1 B DG 12 ? OP1 ? B DG 2 OP1 97 1 Y 1 B DG 12 ? OP2 ? B DG 2 OP2 98 1 Y 1 B DG 12 ? "O5'" ? B DG 2 "O5'" 99 1 Y 1 B DG 12 ? "C5'" ? B DG 2 "C5'" 100 1 Y 1 B DG 12 ? "C4'" ? B DG 2 "C4'" 101 1 Y 1 B DG 12 ? "O4'" ? B DG 2 "O4'" 102 1 Y 1 B DG 12 ? "C3'" ? B DG 2 "C3'" 103 1 Y 1 B DG 12 ? "O3'" ? B DG 2 "O3'" 104 1 Y 1 B DG 12 ? "C2'" ? B DG 2 "C2'" 105 1 Y 1 B DG 12 ? "O2'" ? B DG 2 "O2'" 106 1 Y 1 B DG 12 ? "C1'" ? B DG 2 "C1'" 107 1 Y 1 B DA 13 ? OP1 ? B DA 3 OP1 108 1 Y 1 B DA 13 ? OP2 ? B DA 3 OP2 109 1 Y 1 B DA 13 ? "O5'" ? B DA 3 "O5'" 110 1 Y 1 B DA 13 ? "C5'" ? B DA 3 "C5'" 111 1 Y 1 B DA 13 ? "C4'" ? B DA 3 "C4'" 112 1 Y 1 B DA 13 ? "O4'" ? B DA 3 "O4'" 113 1 Y 1 B DA 13 ? "C3'" ? B DA 3 "C3'" 114 1 Y 1 B DA 13 ? "O3'" ? B DA 3 "O3'" 115 1 Y 1 B DA 13 ? "C2'" ? B DA 3 "C2'" 116 1 Y 1 B DA 13 ? "O2'" ? B DA 3 "O2'" 117 1 Y 1 B DA 13 ? "C1'" ? B DA 3 "C1'" 118 1 Y 1 B DA 14 ? OP1 ? B DA 4 OP1 119 1 Y 1 B DA 14 ? OP2 ? B DA 4 OP2 120 1 Y 1 B DA 14 ? "O5'" ? B DA 4 "O5'" 121 1 Y 1 B DA 14 ? "C5'" ? B DA 4 "C5'" 122 1 Y 1 B DA 14 ? "C4'" ? B DA 4 "C4'" 123 1 Y 1 B DA 14 ? "O4'" ? B DA 4 "O4'" 124 1 Y 1 B DA 14 ? "C3'" ? B DA 4 "C3'" 125 1 Y 1 B DA 14 ? "O3'" ? B DA 4 "O3'" 126 1 Y 1 B DA 14 ? "C2'" ? B DA 4 "C2'" 127 1 Y 1 B DA 14 ? "O2'" ? B DA 4 "O2'" 128 1 Y 1 B DA 14 ? "C1'" ? B DA 4 "C1'" 129 1 Y 1 B DT 15 ? OP1 ? B DT 5 OP1 130 1 Y 1 B DT 15 ? OP2 ? B DT 5 OP2 131 1 Y 1 B DT 15 ? "O5'" ? B DT 5 "O5'" 132 1 Y 1 B DT 15 ? "C5'" ? B DT 5 "C5'" 133 1 Y 1 B DT 15 ? "C4'" ? B DT 5 "C4'" 134 1 Y 1 B DT 15 ? "O4'" ? B DT 5 "O4'" 135 1 Y 1 B DT 15 ? "C3'" ? B DT 5 "C3'" 136 1 Y 1 B DT 15 ? "O3'" ? B DT 5 "O3'" 137 1 Y 1 B DT 15 ? "C2'" ? B DT 5 "C2'" 138 1 Y 1 B DT 15 ? "C1'" ? B DT 5 "C1'" 139 1 Y 1 B DT 16 ? OP1 ? B DT 6 OP1 140 1 Y 1 B DT 16 ? OP2 ? B DT 6 OP2 141 1 Y 1 B DT 16 ? "O5'" ? B DT 6 "O5'" 142 1 Y 1 B DT 16 ? "C5'" ? B DT 6 "C5'" 143 1 Y 1 B DT 16 ? "C4'" ? B DT 6 "C4'" 144 1 Y 1 B DT 16 ? "O4'" ? B DT 6 "O4'" 145 1 Y 1 B DT 16 ? "C3'" ? B DT 6 "C3'" 146 1 Y 1 B DT 16 ? "O3'" ? B DT 6 "O3'" 147 1 Y 1 B DT 16 ? "C2'" ? B DT 6 "C2'" 148 1 Y 1 B DT 16 ? "C1'" ? B DT 6 "C1'" 149 1 Y 1 B DA 17 ? OP1 ? B DA 7 OP1 150 1 Y 1 B DA 17 ? OP2 ? B DA 7 OP2 151 1 Y 1 B DA 17 ? "O5'" ? B DA 7 "O5'" 152 1 Y 1 B DA 17 ? "C5'" ? B DA 7 "C5'" 153 1 Y 1 B DA 17 ? "C4'" ? B DA 7 "C4'" 154 1 Y 1 B DA 17 ? "O4'" ? B DA 7 "O4'" 155 1 Y 1 B DA 17 ? "C3'" ? B DA 7 "C3'" 156 1 Y 1 B DA 17 ? "O3'" ? B DA 7 "O3'" 157 1 Y 1 B DA 17 ? "C2'" ? B DA 7 "C2'" 158 1 Y 1 B DA 17 ? "O2'" ? B DA 7 "O2'" 159 1 Y 1 B DA 17 ? "C1'" ? B DA 7 "C1'" 160 1 Y 1 B DA 18 ? OP1 ? B DA 8 OP1 161 1 Y 1 B DA 18 ? OP2 ? B DA 8 OP2 162 1 Y 1 B DA 18 ? "O5'" ? B DA 8 "O5'" 163 1 Y 1 B DA 18 ? "C5'" ? B DA 8 "C5'" 164 1 Y 1 B DA 18 ? "C4'" ? B DA 8 "C4'" 165 1 Y 1 B DA 18 ? "O4'" ? B DA 8 "O4'" 166 1 Y 1 B DA 18 ? "C3'" ? B DA 8 "C3'" 167 1 Y 1 B DA 18 ? "O3'" ? B DA 8 "O3'" 168 1 Y 1 B DA 18 ? "C2'" ? B DA 8 "C2'" 169 1 Y 1 B DA 18 ? "O2'" ? B DA 8 "O2'" 170 1 Y 1 B DA 18 ? "C1'" ? B DA 8 "C1'" 171 1 Y 1 B DG 19 ? OP1 ? B DG 9 OP1 172 1 Y 1 B DG 19 ? OP2 ? B DG 9 OP2 173 1 Y 1 B DG 19 ? "O5'" ? B DG 9 "O5'" 174 1 Y 1 B DG 19 ? "C5'" ? B DG 9 "C5'" 175 1 Y 1 B DG 19 ? "C4'" ? B DG 9 "C4'" 176 1 Y 1 B DG 19 ? "O4'" ? B DG 9 "O4'" 177 1 Y 1 B DG 19 ? "C3'" ? B DG 9 "C3'" 178 1 Y 1 B DG 19 ? "O3'" ? B DG 9 "O3'" 179 1 Y 1 B DG 19 ? "C2'" ? B DG 9 "C2'" 180 1 Y 1 B DG 19 ? "O2'" ? B DG 9 "O2'" 181 1 Y 1 B DG 19 ? "C1'" ? B DG 9 "C1'" 182 1 Y 1 B DC 20 ? OP1 ? B DC 10 OP1 183 1 Y 1 B DC 20 ? OP2 ? B DC 10 OP2 184 1 Y 1 B DC 20 ? "O5'" ? B DC 10 "O5'" 185 1 Y 1 B DC 20 ? "C5'" ? B DC 10 "C5'" 186 1 Y 1 B DC 20 ? "C4'" ? B DC 10 "C4'" 187 1 Y 1 B DC 20 ? "O4'" ? B DC 10 "O4'" 188 1 Y 1 B DC 20 ? "C3'" ? B DC 10 "C3'" 189 1 Y 1 B DC 20 ? "O3'" ? B DC 10 "O3'" 190 1 Y 1 B DC 20 ? "C2'" ? B DC 10 "C2'" 191 1 Y 1 B DC 20 ? "O2'" ? B DC 10 "O2'" 192 1 Y 1 B DC 20 ? "C1'" ? B DC 10 "C1'" 193 1 Y 1 C DG 101 ? "O5'" ? C DG 1 "O5'" 194 1 Y 1 C DG 101 ? "C5'" ? C DG 1 "C5'" 195 1 Y 1 C DG 101 ? "C4'" ? C DG 1 "C4'" 196 1 Y 1 C DG 101 ? "O4'" ? C DG 1 "O4'" 197 1 Y 1 C DG 101 ? "C3'" ? C DG 1 "C3'" 198 1 Y 1 C DG 101 ? "O3'" ? C DG 1 "O3'" 199 1 Y 1 C DG 101 ? "C2'" ? C DG 1 "C2'" 200 1 Y 1 C DG 101 ? "O2'" ? C DG 1 "O2'" 201 1 Y 1 C DG 101 ? "C1'" ? C DG 1 "C1'" 202 1 Y 1 C DC 102 ? OP1 ? C DC 2 OP1 203 1 Y 1 C DC 102 ? OP2 ? C DC 2 OP2 204 1 Y 1 C DC 102 ? "O5'" ? C DC 2 "O5'" 205 1 Y 1 C DC 102 ? "C5'" ? C DC 2 "C5'" 206 1 Y 1 C DC 102 ? "C4'" ? C DC 2 "C4'" 207 1 Y 1 C DC 102 ? "O4'" ? C DC 2 "O4'" 208 1 Y 1 C DC 102 ? "C3'" ? C DC 2 "C3'" 209 1 Y 1 C DC 102 ? "O3'" ? C DC 2 "O3'" 210 1 Y 1 C DC 102 ? "C2'" ? C DC 2 "C2'" 211 1 Y 1 C DC 102 ? "O2'" ? C DC 2 "O2'" 212 1 Y 1 C DC 102 ? "C1'" ? C DC 2 "C1'" 213 1 Y 1 C DT 104 ? OP1 ? C DT 4 OP1 214 1 Y 1 C DT 104 ? OP2 ? C DT 4 OP2 215 1 Y 1 C DT 104 ? "O5'" ? C DT 4 "O5'" 216 1 Y 1 C DT 104 ? "C5'" ? C DT 4 "C5'" 217 1 Y 1 C DT 104 ? "C4'" ? C DT 4 "C4'" 218 1 Y 1 C DT 104 ? "O4'" ? C DT 4 "O4'" 219 1 Y 1 C DT 104 ? "C3'" ? C DT 4 "C3'" 220 1 Y 1 C DT 104 ? "O3'" ? C DT 4 "O3'" 221 1 Y 1 C DT 104 ? "C2'" ? C DT 4 "C2'" 222 1 Y 1 C DT 104 ? "C1'" ? C DT 4 "C1'" 223 1 Y 1 C DT 104 ? C7 ? C DT 4 C7 224 1 Y 1 C DA 105 ? OP1 ? C DA 5 OP1 225 1 Y 1 C DA 105 ? OP2 ? C DA 5 OP2 226 1 Y 1 C DA 105 ? "O5'" ? C DA 5 "O5'" 227 1 Y 1 C DA 105 ? "C5'" ? C DA 5 "C5'" 228 1 Y 1 C DA 105 ? "C4'" ? C DA 5 "C4'" 229 1 Y 1 C DA 105 ? "O4'" ? C DA 5 "O4'" 230 1 Y 1 C DA 105 ? "C3'" ? C DA 5 "C3'" 231 1 Y 1 C DA 105 ? "O3'" ? C DA 5 "O3'" 232 1 Y 1 C DA 105 ? "C2'" ? C DA 5 "C2'" 233 1 Y 1 C DA 105 ? "O2'" ? C DA 5 "O2'" 234 1 Y 1 C DA 105 ? "C1'" ? C DA 5 "C1'" 235 1 Y 1 C DA 106 ? OP1 ? C DA 6 OP1 236 1 Y 1 C DA 106 ? OP2 ? C DA 6 OP2 237 1 Y 1 C DA 106 ? "O5'" ? C DA 6 "O5'" 238 1 Y 1 C DA 106 ? "C5'" ? C DA 6 "C5'" 239 1 Y 1 C DA 106 ? "C4'" ? C DA 6 "C4'" 240 1 Y 1 C DA 106 ? "O4'" ? C DA 6 "O4'" 241 1 Y 1 C DA 106 ? "C3'" ? C DA 6 "C3'" 242 1 Y 1 C DA 106 ? "O3'" ? C DA 6 "O3'" 243 1 Y 1 C DA 106 ? "C2'" ? C DA 6 "C2'" 244 1 Y 1 C DA 106 ? "O2'" ? C DA 6 "O2'" 245 1 Y 1 C DA 106 ? "C1'" ? C DA 6 "C1'" 246 1 Y 1 C DT 107 ? OP1 ? C DT 7 OP1 247 1 Y 1 C DT 107 ? OP2 ? C DT 7 OP2 248 1 Y 1 C DT 107 ? "O5'" ? C DT 7 "O5'" 249 1 Y 1 C DT 107 ? "C5'" ? C DT 7 "C5'" 250 1 Y 1 C DT 107 ? "C4'" ? C DT 7 "C4'" 251 1 Y 1 C DT 107 ? "O4'" ? C DT 7 "O4'" 252 1 Y 1 C DT 107 ? "C3'" ? C DT 7 "C3'" 253 1 Y 1 C DT 107 ? "O3'" ? C DT 7 "O3'" 254 1 Y 1 C DT 107 ? "C2'" ? C DT 7 "C2'" 255 1 Y 1 C DT 107 ? "C1'" ? C DT 7 "C1'" 256 1 Y 1 C DT 107 ? C7 ? C DT 7 C7 257 1 Y 1 C DC 109 ? OP1 ? C DC 9 OP1 258 1 Y 1 C DC 109 ? OP2 ? C DC 9 OP2 259 1 Y 1 C DC 109 ? "O5'" ? C DC 9 "O5'" 260 1 Y 1 C DC 109 ? "C5'" ? C DC 9 "C5'" 261 1 Y 1 C DC 109 ? "C4'" ? C DC 9 "C4'" 262 1 Y 1 C DC 109 ? "O4'" ? C DC 9 "O4'" 263 1 Y 1 C DC 109 ? "C3'" ? C DC 9 "C3'" 264 1 Y 1 C DC 109 ? "O3'" ? C DC 9 "O3'" 265 1 Y 1 C DC 109 ? "C2'" ? C DC 9 "C2'" 266 1 Y 1 C DC 109 ? "O2'" ? C DC 9 "O2'" 267 1 Y 1 C DC 109 ? "C1'" ? C DC 9 "C1'" 268 1 Y 1 C DG 110 ? OP1 ? C DG 10 OP1 269 1 Y 1 C DG 110 ? OP2 ? C DG 10 OP2 270 1 Y 1 C DG 110 ? "O5'" ? C DG 10 "O5'" 271 1 Y 1 C DG 110 ? "C5'" ? C DG 10 "C5'" 272 1 Y 1 C DG 110 ? "C4'" ? C DG 10 "C4'" 273 1 Y 1 C DG 110 ? "O4'" ? C DG 10 "O4'" 274 1 Y 1 C DG 110 ? "C3'" ? C DG 10 "C3'" 275 1 Y 1 C DG 110 ? "O3'" ? C DG 10 "O3'" 276 1 Y 1 C DG 110 ? "C2'" ? C DG 10 "C2'" 277 1 Y 1 C DG 110 ? "O2'" ? C DG 10 "O2'" 278 1 Y 1 C DG 110 ? "C1'" ? C DG 10 "C1'" 279 1 Y 1 D DC 111 ? "O5'" ? D DC 1 "O5'" 280 1 Y 1 D DC 111 ? "C5'" ? D DC 1 "C5'" 281 1 Y 1 D DC 111 ? "C4'" ? D DC 1 "C4'" 282 1 Y 1 D DC 111 ? "O4'" ? D DC 1 "O4'" 283 1 Y 1 D DC 111 ? "C3'" ? D DC 1 "C3'" 284 1 Y 1 D DC 111 ? "O3'" ? D DC 1 "O3'" 285 1 Y 1 D DC 111 ? "C2'" ? D DC 1 "C2'" 286 1 Y 1 D DC 111 ? "O2'" ? D DC 1 "O2'" 287 1 Y 1 D DC 111 ? "C1'" ? D DC 1 "C1'" 288 1 Y 1 D DG 112 ? OP1 ? D DG 2 OP1 289 1 Y 1 D DG 112 ? OP2 ? D DG 2 OP2 290 1 Y 1 D DG 112 ? "O5'" ? D DG 2 "O5'" 291 1 Y 1 D DG 112 ? "C5'" ? D DG 2 "C5'" 292 1 Y 1 D DG 112 ? "C4'" ? D DG 2 "C4'" 293 1 Y 1 D DG 112 ? "O4'" ? D DG 2 "O4'" 294 1 Y 1 D DG 112 ? "C3'" ? D DG 2 "C3'" 295 1 Y 1 D DG 112 ? "O3'" ? D DG 2 "O3'" 296 1 Y 1 D DG 112 ? "C2'" ? D DG 2 "C2'" 297 1 Y 1 D DG 112 ? "O2'" ? D DG 2 "O2'" 298 1 Y 1 D DG 112 ? "C1'" ? D DG 2 "C1'" 299 1 Y 1 D DA 113 ? OP1 ? D DA 3 OP1 300 1 Y 1 D DA 113 ? OP2 ? D DA 3 OP2 301 1 Y 1 D DA 113 ? "O5'" ? D DA 3 "O5'" 302 1 Y 1 D DA 113 ? "C5'" ? D DA 3 "C5'" 303 1 Y 1 D DA 113 ? "C4'" ? D DA 3 "C4'" 304 1 Y 1 D DA 113 ? "O4'" ? D DA 3 "O4'" 305 1 Y 1 D DA 113 ? "C3'" ? D DA 3 "C3'" 306 1 Y 1 D DA 113 ? "O3'" ? D DA 3 "O3'" 307 1 Y 1 D DA 113 ? "C2'" ? D DA 3 "C2'" 308 1 Y 1 D DA 113 ? "O2'" ? D DA 3 "O2'" 309 1 Y 1 D DA 113 ? "C1'" ? D DA 3 "C1'" 310 1 Y 1 D DA 114 ? OP1 ? D DA 4 OP1 311 1 Y 1 D DA 114 ? OP2 ? D DA 4 OP2 312 1 Y 1 D DA 114 ? "O5'" ? D DA 4 "O5'" 313 1 Y 1 D DA 114 ? "C5'" ? D DA 4 "C5'" 314 1 Y 1 D DA 114 ? "C4'" ? D DA 4 "C4'" 315 1 Y 1 D DA 114 ? "O4'" ? D DA 4 "O4'" 316 1 Y 1 D DA 114 ? "C3'" ? D DA 4 "C3'" 317 1 Y 1 D DA 114 ? "O3'" ? D DA 4 "O3'" 318 1 Y 1 D DA 114 ? "C2'" ? D DA 4 "C2'" 319 1 Y 1 D DA 114 ? "O2'" ? D DA 4 "O2'" 320 1 Y 1 D DA 114 ? "C1'" ? D DA 4 "C1'" 321 1 Y 1 D DT 115 ? OP1 ? D DT 5 OP1 322 1 Y 1 D DT 115 ? OP2 ? D DT 5 OP2 323 1 Y 1 D DT 115 ? "O5'" ? D DT 5 "O5'" 324 1 Y 1 D DT 115 ? "C5'" ? D DT 5 "C5'" 325 1 Y 1 D DT 115 ? "C4'" ? D DT 5 "C4'" 326 1 Y 1 D DT 115 ? "O4'" ? D DT 5 "O4'" 327 1 Y 1 D DT 115 ? "C3'" ? D DT 5 "C3'" 328 1 Y 1 D DT 115 ? "O3'" ? D DT 5 "O3'" 329 1 Y 1 D DT 115 ? "C2'" ? D DT 5 "C2'" 330 1 Y 1 D DT 115 ? "C1'" ? D DT 5 "C1'" 331 1 Y 1 D DT 116 ? OP1 ? D DT 6 OP1 332 1 Y 1 D DT 116 ? OP2 ? D DT 6 OP2 333 1 Y 1 D DT 116 ? "O5'" ? D DT 6 "O5'" 334 1 Y 1 D DT 116 ? "C5'" ? D DT 6 "C5'" 335 1 Y 1 D DT 116 ? "C4'" ? D DT 6 "C4'" 336 1 Y 1 D DT 116 ? "O4'" ? D DT 6 "O4'" 337 1 Y 1 D DT 116 ? "C3'" ? D DT 6 "C3'" 338 1 Y 1 D DT 116 ? "O3'" ? D DT 6 "O3'" 339 1 Y 1 D DT 116 ? "C2'" ? D DT 6 "C2'" 340 1 Y 1 D DT 116 ? "C1'" ? D DT 6 "C1'" 341 1 Y 1 D DA 117 ? OP1 ? D DA 7 OP1 342 1 Y 1 D DA 117 ? OP2 ? D DA 7 OP2 343 1 Y 1 D DA 117 ? "O5'" ? D DA 7 "O5'" 344 1 Y 1 D DA 117 ? "C5'" ? D DA 7 "C5'" 345 1 Y 1 D DA 117 ? "C4'" ? D DA 7 "C4'" 346 1 Y 1 D DA 117 ? "O4'" ? D DA 7 "O4'" 347 1 Y 1 D DA 117 ? "C3'" ? D DA 7 "C3'" 348 1 Y 1 D DA 117 ? "O3'" ? D DA 7 "O3'" 349 1 Y 1 D DA 117 ? "C2'" ? D DA 7 "C2'" 350 1 Y 1 D DA 117 ? "O2'" ? D DA 7 "O2'" 351 1 Y 1 D DA 117 ? "C1'" ? D DA 7 "C1'" 352 1 Y 1 D DA 118 ? OP1 ? D DA 8 OP1 353 1 Y 1 D DA 118 ? OP2 ? D DA 8 OP2 354 1 Y 1 D DA 118 ? "O5'" ? D DA 8 "O5'" 355 1 Y 1 D DA 118 ? "C5'" ? D DA 8 "C5'" 356 1 Y 1 D DA 118 ? "C4'" ? D DA 8 "C4'" 357 1 Y 1 D DA 118 ? "O4'" ? D DA 8 "O4'" 358 1 Y 1 D DA 118 ? "C3'" ? D DA 8 "C3'" 359 1 Y 1 D DA 118 ? "O3'" ? D DA 8 "O3'" 360 1 Y 1 D DA 118 ? "C2'" ? D DA 8 "C2'" 361 1 Y 1 D DA 118 ? "O2'" ? D DA 8 "O2'" 362 1 Y 1 D DA 118 ? "C1'" ? D DA 8 "C1'" 363 1 Y 1 D DG 119 ? OP1 ? D DG 9 OP1 364 1 Y 1 D DG 119 ? OP2 ? D DG 9 OP2 365 1 Y 1 D DG 119 ? "O5'" ? D DG 9 "O5'" 366 1 Y 1 D DG 119 ? "C5'" ? D DG 9 "C5'" 367 1 Y 1 D DG 119 ? "C4'" ? D DG 9 "C4'" 368 1 Y 1 D DG 119 ? "O4'" ? D DG 9 "O4'" 369 1 Y 1 D DG 119 ? "C3'" ? D DG 9 "C3'" 370 1 Y 1 D DG 119 ? "O3'" ? D DG 9 "O3'" 371 1 Y 1 D DG 119 ? "C2'" ? D DG 9 "C2'" 372 1 Y 1 D DG 119 ? "O2'" ? D DG 9 "O2'" 373 1 Y 1 D DG 119 ? "C1'" ? D DG 9 "C1'" 374 1 Y 1 D DC 120 ? OP1 ? D DC 10 OP1 375 1 Y 1 D DC 120 ? OP2 ? D DC 10 OP2 376 1 Y 1 D DC 120 ? "O5'" ? D DC 10 "O5'" 377 1 Y 1 D DC 120 ? "C5'" ? D DC 10 "C5'" 378 1 Y 1 D DC 120 ? "C4'" ? D DC 10 "C4'" 379 1 Y 1 D DC 120 ? "O4'" ? D DC 10 "O4'" 380 1 Y 1 D DC 120 ? "C3'" ? D DC 10 "C3'" 381 1 Y 1 D DC 120 ? "O3'" ? D DC 10 "O3'" 382 1 Y 1 D DC 120 ? "C2'" ? D DC 10 "C2'" 383 1 Y 1 D DC 120 ? "O2'" ? D DC 10 "O2'" 384 1 Y 1 D DC 120 ? "C1'" ? D DC 10 "C1'" # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1MV7 'double helix' 1MV7 'b-form double helix' 1MV7 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 B C 10 1_555 -0.108 -0.174 -0.125 -0.092 -13.479 -0.133 1 A_G1:C20_B A 1 ? B 20 ? 19 1 1 A C 2 1_555 B G 9 1_555 0.730 -0.392 0.540 -8.862 -12.893 1.565 2 A_C2:G19_B A 2 ? B 19 ? 19 1 1 A T 4 1_555 B A 7 1_555 0.513 -0.288 -0.346 10.897 -13.164 5.575 3 A_T4:A17_B A 4 ? B 17 ? 20 1 1 A A 5 1_555 B T 6 1_555 0.089 -0.300 0.444 22.714 9.963 -4.336 4 A_A5:T16_B A 5 ? B 16 ? 20 1 1 A A 6 1_555 B T 5 1_555 -0.319 -0.272 -1.471 -26.626 -24.756 1.366 5 A_A6:T15_B A 6 ? B 15 ? 20 1 1 A T 7 1_555 B A 4 1_555 -0.055 -0.157 -0.300 8.511 -14.370 4.473 6 A_T7:A14_B A 7 ? B 14 ? 20 1 1 A C 9 1_555 B G 2 1_555 0.224 -0.184 -0.584 13.994 -14.781 -0.349 7 A_C9:G12_B A 9 ? B 12 ? 19 1 1 A G 10 1_555 B C 1 1_555 -0.115 -0.011 0.251 14.198 -6.210 -2.281 8 A_G10:C11_B A 10 ? B 11 ? 19 1 1 C G 1 1_555 D C 10 1_555 -0.086 0.086 -0.222 -2.145 -6.088 -0.559 9 C_G101:C120_D C 101 ? D 120 ? 19 1 1 C C 2 1_555 D G 9 1_555 0.511 -0.253 0.547 -16.789 -17.407 -2.097 10 C_C102:G119_D C 102 ? D 119 ? 19 1 1 C T 4 1_555 D A 7 1_555 -0.148 -0.330 0.165 -3.181 -12.345 1.202 11 C_T104:A117_D C 104 ? D 117 ? 20 1 1 C A 5 1_555 D T 6 1_555 0.171 0.176 0.803 15.523 -0.113 -4.577 12 C_A105:T116_D C 105 ? D 116 ? 20 1 1 C A 6 1_555 D T 5 1_555 0.606 -0.078 -1.708 -33.992 -31.496 9.596 13 C_A106:T115_D C 106 ? D 115 ? 20 1 1 C T 7 1_555 D A 4 1_555 -0.760 -0.162 0.036 -1.684 -17.775 4.379 14 C_T107:A114_D C 107 ? D 114 ? 20 1 1 C C 9 1_555 D G 2 1_555 -0.089 -0.031 -0.052 7.807 -15.935 -1.753 15 C_C109:G112_D C 109 ? D 112 ? 19 1 1 C G 10 1_555 D C 1 1_555 -0.107 -0.222 -0.434 4.072 9.797 -1.301 16 C_G110:C111_D C 110 ? D 111 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 B C 10 1_555 A C 2 1_555 B G 9 1_555 -0.362 -0.322 3.528 -6.473 -1.585 41.360 -0.271 -0.230 3.552 -2.226 9.094 41.871 1 AA_G1C2:G19C20_BB A 1 ? B 20 ? A 2 ? B 19 ? 1 A C 2 1_555 B G 9 1_555 A T 4 1_555 B A 7 1_555 -0.227 -0.382 5.885 6.280 3.403 63.831 -0.621 0.697 5.818 3.208 -5.920 64.188 2 AA_C2T4:A17G19_BB A 2 ? B 19 ? A 4 ? B 17 ? 1 A T 4 1_555 B A 7 1_555 A A 5 1_555 B T 6 1_555 1.173 0.032 3.068 -6.253 5.641 37.330 -0.598 -2.508 2.818 8.678 9.619 38.235 3 AA_T4A5:T16A17_BB A 4 ? B 17 ? A 5 ? B 16 ? 1 A A 5 1_555 B T 6 1_555 A A 6 1_555 B T 5 1_555 -1.701 0.030 4.409 20.503 21.202 24.144 -3.228 5.782 1.947 37.044 -35.822 37.946 4 AA_A5A6:T15T16_BB A 5 ? B 16 ? A 6 ? B 15 ? 1 A A 6 1_555 B T 5 1_555 A T 7 1_555 B A 4 1_555 0.079 0.064 2.491 -15.103 4.361 29.156 -0.450 -2.086 2.177 7.975 27.616 33.043 5 AA_A6T7:A14T15_BB A 6 ? B 15 ? A 7 ? B 14 ? 1 A T 7 1_555 B A 4 1_555 A C 9 1_555 B G 2 1_555 -0.440 0.645 6.459 6.544 8.563 73.107 -0.001 0.778 6.438 7.151 -5.465 73.788 6 AA_T7C9:G12A14_BB A 7 ? B 14 ? A 9 ? B 12 ? 1 A C 9 1_555 B G 2 1_555 A G 10 1_555 B C 1 1_555 -0.226 0.456 3.387 -6.134 5.592 34.917 -0.103 -0.559 3.407 9.159 10.048 35.860 7 AA_C9G10:C11G12_BB A 9 ? B 12 ? A 10 ? B 11 ? 1 C G 1 1_555 D C 10 1_555 C C 2 1_555 D G 9 1_555 -0.757 -0.508 3.570 -6.738 -0.147 36.170 -0.784 0.179 3.649 -0.234 10.737 36.772 8 CC_G101C102:G119C120_DD C 101 ? D 120 ? C 102 ? D 119 ? 1 C C 2 1_555 D G 9 1_555 C T 4 1_555 D A 7 1_555 -0.342 -0.297 6.206 3.309 9.529 60.131 -1.157 0.638 6.077 9.438 -3.278 60.893 9 CC_C102T104:A117G119_DD C 102 ? D 119 ? C 104 ? D 117 ? 1 C T 4 1_555 D A 7 1_555 C A 5 1_555 D T 6 1_555 1.060 0.089 2.931 -2.713 -3.989 41.673 0.492 -1.731 2.840 -5.585 3.798 41.939 10 CC_T104A105:T116A117_DD C 104 ? D 117 ? C 105 ? D 116 ? 1 C A 5 1_555 D T 6 1_555 C A 6 1_555 D T 5 1_555 -0.889 -0.243 4.401 26.639 21.469 26.524 -2.999 4.520 2.093 33.446 -41.500 43.047 11 CC_A105A106:T115T116_DD C 105 ? D 116 ? C 106 ? D 115 ? 1 C A 6 1_555 D T 5 1_555 C T 7 1_555 D A 4 1_555 -0.083 0.226 2.520 -20.024 0.539 22.571 0.348 -3.071 1.958 1.132 42.049 30.092 12 CC_A106T107:A114T115_DD C 106 ? D 115 ? C 107 ? D 114 ? 1 C T 7 1_555 D A 4 1_555 C C 9 1_555 D G 2 1_555 0.019 0.258 6.498 3.451 11.705 69.413 -0.599 0.226 6.461 10.199 -3.007 70.345 13 CC_T107C109:G112A114_DD C 107 ? D 114 ? C 109 ? D 112 ? 1 C C 9 1_555 D G 2 1_555 C G 10 1_555 D C 1 1_555 -0.188 0.687 3.669 0.484 -6.372 45.918 1.472 0.284 3.547 -8.121 -0.617 46.336 14 CC_C109G110:C111G112_DD C 109 ? D 112 ? C 110 ? D 111 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'BROMO GROUP' BRO 4 water HOH #