data_1MWJ # _entry.id 1MWJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1MWJ pdb_00001mwj 10.2210/pdb1mwj/pdb NDB PD0354 ? ? RCSB RCSB017249 ? ? WWPDB D_1000017249 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-10-11 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 5 'Structure model' 1 4 2024-02-14 6 'Structure model' 1 5 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' Advisory 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_unobs_or_zero_occ_residues 2 4 'Structure model' software 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' database_2 6 5 'Structure model' pdbx_unobs_or_zero_occ_residues 7 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1MWJ _pdbx_database_status.recvd_initial_deposition_date 2002-09-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1MUG _pdbx_database_related.details 'Native MUG DNA glycosylase Structure' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Barrett, T.E.' 1 'Scharer, O.' 2 'Savva, R.' 3 'Brown, T.' 4 'Jiricny, J.' 5 'Verdine, G.L.' 6 'Pearl, L.H.' 7 # _citation.id primary _citation.title 'Crystal Structure of a thwarted mismatch glycosylase DNA repair complex' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 18 _citation.page_first 6599 _citation.page_last 6609 _citation.year 1999 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10581234 _citation.pdbx_database_id_DOI 10.1093/emboj/18.23.6599 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Barrett, T.E.' 1 ? primary 'Scharer, O.' 2 ? primary 'Savva, R.' 3 ? primary 'Brown, T.' 4 ? primary 'Jiricny, J.' 5 ? primary 'Verdine, G.L.' 6 ? primary 'Pearl, L.H.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*GP*CP*GP*A*GP*(DU)P*TP*CP*GP*CP*G)-3'" 3665.365 1 ? ? ? ? 2 polymer man 'G/U mismatch-specific DNA glycosylase' 18696.352 1 3.2.2.- ? ? ? 3 water nat water 18.015 58 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'MUG DNA GLYCOSYLASE, Mismatch-specific uracil DNA-glycosylase, UDG' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DG)(DC)(DG)(DA)(DG)(DU)(DT)(DC)(DG)(DC)(DG)' CGCGAGUTCGCG D ? 2 'polypeptide(L)' no no ;MVEDILAPGLRVVFCGINPGLSSAGTGFPFAHPANRFWKVIYQAGFTDRQLKPQEAQHLLDYRCGVTKLVDRPTVQANEV SKQELHAGGRKLIEKIEDYQPQALAILGKQAYEQGFSQRGAQWGKQTLTIGSTQIWVLPNPSGLSRVSLEKLVEAYRELD QALVVRGR ; ;MVEDILAPGLRVVFCGINPGLSSAGTGFPFAHPANRFWKVIYQAGFTDRQLKPQEAQHLLDYRCGVTKLVDRPTVQANEV SKQELHAGGRKLIEKIEDYQPQALAILGKQAYEQGFSQRGAQWGKQTLTIGSTQIWVLPNPSGLSRVSLEKLVEAYRELD QALVVRGR ; A ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DC n 1 4 DG n 1 5 DA n 1 6 DG n 1 7 DU n 1 8 DT n 1 9 DC n 1 10 DG n 1 11 DC n 1 12 DG n 2 1 MET n 2 2 VAL n 2 3 GLU n 2 4 ASP n 2 5 ILE n 2 6 LEU n 2 7 ALA n 2 8 PRO n 2 9 GLY n 2 10 LEU n 2 11 ARG n 2 12 VAL n 2 13 VAL n 2 14 PHE n 2 15 CYS n 2 16 GLY n 2 17 ILE n 2 18 ASN n 2 19 PRO n 2 20 GLY n 2 21 LEU n 2 22 SER n 2 23 SER n 2 24 ALA n 2 25 GLY n 2 26 THR n 2 27 GLY n 2 28 PHE n 2 29 PRO n 2 30 PHE n 2 31 ALA n 2 32 HIS n 2 33 PRO n 2 34 ALA n 2 35 ASN n 2 36 ARG n 2 37 PHE n 2 38 TRP n 2 39 LYS n 2 40 VAL n 2 41 ILE n 2 42 TYR n 2 43 GLN n 2 44 ALA n 2 45 GLY n 2 46 PHE n 2 47 THR n 2 48 ASP n 2 49 ARG n 2 50 GLN n 2 51 LEU n 2 52 LYS n 2 53 PRO n 2 54 GLN n 2 55 GLU n 2 56 ALA n 2 57 GLN n 2 58 HIS n 2 59 LEU n 2 60 LEU n 2 61 ASP n 2 62 TYR n 2 63 ARG n 2 64 CYS n 2 65 GLY n 2 66 VAL n 2 67 THR n 2 68 LYS n 2 69 LEU n 2 70 VAL n 2 71 ASP n 2 72 ARG n 2 73 PRO n 2 74 THR n 2 75 VAL n 2 76 GLN n 2 77 ALA n 2 78 ASN n 2 79 GLU n 2 80 VAL n 2 81 SER n 2 82 LYS n 2 83 GLN n 2 84 GLU n 2 85 LEU n 2 86 HIS n 2 87 ALA n 2 88 GLY n 2 89 GLY n 2 90 ARG n 2 91 LYS n 2 92 LEU n 2 93 ILE n 2 94 GLU n 2 95 LYS n 2 96 ILE n 2 97 GLU n 2 98 ASP n 2 99 TYR n 2 100 GLN n 2 101 PRO n 2 102 GLN n 2 103 ALA n 2 104 LEU n 2 105 ALA n 2 106 ILE n 2 107 LEU n 2 108 GLY n 2 109 LYS n 2 110 GLN n 2 111 ALA n 2 112 TYR n 2 113 GLU n 2 114 GLN n 2 115 GLY n 2 116 PHE n 2 117 SER n 2 118 GLN n 2 119 ARG n 2 120 GLY n 2 121 ALA n 2 122 GLN n 2 123 TRP n 2 124 GLY n 2 125 LYS n 2 126 GLN n 2 127 THR n 2 128 LEU n 2 129 THR n 2 130 ILE n 2 131 GLY n 2 132 SER n 2 133 THR n 2 134 GLN n 2 135 ILE n 2 136 TRP n 2 137 VAL n 2 138 LEU n 2 139 PRO n 2 140 ASN n 2 141 PRO n 2 142 SER n 2 143 GLY n 2 144 LEU n 2 145 SER n 2 146 ARG n 2 147 VAL n 2 148 SER n 2 149 LEU n 2 150 GLU n 2 151 LYS n 2 152 LEU n 2 153 VAL n 2 154 GLU n 2 155 ALA n 2 156 TYR n 2 157 ARG n 2 158 GLU n 2 159 LEU n 2 160 ASP n 2 161 GLN n 2 162 ALA n 2 163 LEU n 2 164 VAL n 2 165 VAL n 2 166 ARG n 2 167 GLY n 2 168 ARG n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene MUG _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21DE3 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pTRC99A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 DU 'DNA linking' y "2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O8 P' 308.182 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC CYT D . n A 1 2 DG 2 2 2 DG GUA D . n A 1 3 DC 3 3 3 DC CYT D . n A 1 4 DG 4 4 4 DG GUA D . n A 1 5 DA 5 5 5 DA ADE D . n A 1 6 DG 6 6 6 DG GUA D . n A 1 7 DU 7 7 7 DU URI D . n A 1 8 DT 8 8 8 DT THY D . n A 1 9 DC 9 9 9 DC CYT D . n A 1 10 DG 10 10 10 DG GUA D . n A 1 11 DC 11 11 11 DC CYT D . n A 1 12 DG 12 12 12 DG GUA D . n B 2 1 MET 1 1 1 MET MET A . n B 2 2 VAL 2 2 2 VAL VAL A . n B 2 3 GLU 3 3 3 GLU GLU A . n B 2 4 ASP 4 4 4 ASP ASP A . n B 2 5 ILE 5 5 5 ILE ILE A . n B 2 6 LEU 6 6 6 LEU LEU A . n B 2 7 ALA 7 7 7 ALA ALA A . n B 2 8 PRO 8 8 8 PRO PRO A . n B 2 9 GLY 9 9 9 GLY GLY A . n B 2 10 LEU 10 10 10 LEU LEU A . n B 2 11 ARG 11 11 11 ARG ARG A . n B 2 12 VAL 12 12 12 VAL VAL A . n B 2 13 VAL 13 13 13 VAL VAL A . n B 2 14 PHE 14 14 14 PHE PHE A . n B 2 15 CYS 15 15 15 CYS CYS A . n B 2 16 GLY 16 16 16 GLY GLY A . n B 2 17 ILE 17 17 17 ILE ILE A . n B 2 18 ASN 18 18 18 ASN ASN A . n B 2 19 PRO 19 19 19 PRO PRO A . n B 2 20 GLY 20 20 20 GLY GLY A . n B 2 21 LEU 21 21 21 LEU LEU A . n B 2 22 SER 22 22 22 SER SER A . n B 2 23 SER 23 23 23 SER SER A . n B 2 24 ALA 24 24 24 ALA ALA A . n B 2 25 GLY 25 25 25 GLY GLY A . n B 2 26 THR 26 26 26 THR THR A . n B 2 27 GLY 27 27 27 GLY GLY A . n B 2 28 PHE 28 28 28 PHE PHE A . n B 2 29 PRO 29 29 29 PRO PRO A . n B 2 30 PHE 30 30 30 PHE PHE A . n B 2 31 ALA 31 31 31 ALA ALA A . n B 2 32 HIS 32 32 32 HIS HIS A . n B 2 33 PRO 33 33 33 PRO PRO A . n B 2 34 ALA 34 34 34 ALA ALA A . n B 2 35 ASN 35 35 35 ASN ASN A . n B 2 36 ARG 36 36 36 ARG ARG A . n B 2 37 PHE 37 37 37 PHE PHE A . n B 2 38 TRP 38 38 38 TRP TRP A . n B 2 39 LYS 39 39 39 LYS LYS A . n B 2 40 VAL 40 40 40 VAL VAL A . n B 2 41 ILE 41 41 41 ILE ILE A . n B 2 42 TYR 42 42 42 TYR TYR A . n B 2 43 GLN 43 43 43 GLN GLN A . n B 2 44 ALA 44 44 44 ALA ALA A . n B 2 45 GLY 45 45 45 GLY GLY A . n B 2 46 PHE 46 46 46 PHE PHE A . n B 2 47 THR 47 47 47 THR THR A . n B 2 48 ASP 48 48 48 ASP ASP A . n B 2 49 ARG 49 49 49 ARG ARG A . n B 2 50 GLN 50 50 50 GLN GLN A . n B 2 51 LEU 51 51 51 LEU LEU A . n B 2 52 LYS 52 52 52 LYS LYS A . n B 2 53 PRO 53 53 53 PRO PRO A . n B 2 54 GLN 54 54 54 GLN GLN A . n B 2 55 GLU 55 55 55 GLU GLU A . n B 2 56 ALA 56 56 56 ALA ALA A . n B 2 57 GLN 57 57 57 GLN GLN A . n B 2 58 HIS 58 58 58 HIS HIS A . n B 2 59 LEU 59 59 59 LEU LEU A . n B 2 60 LEU 60 60 60 LEU LEU A . n B 2 61 ASP 61 61 61 ASP ASP A . n B 2 62 TYR 62 62 62 TYR TYR A . n B 2 63 ARG 63 63 63 ARG ARG A . n B 2 64 CYS 64 64 64 CYS CYS A . n B 2 65 GLY 65 65 65 GLY GLY A . n B 2 66 VAL 66 66 66 VAL VAL A . n B 2 67 THR 67 67 67 THR THR A . n B 2 68 LYS 68 68 68 LYS LYS A . n B 2 69 LEU 69 69 69 LEU LEU A . n B 2 70 VAL 70 70 70 VAL VAL A . n B 2 71 ASP 71 71 71 ASP ASP A . n B 2 72 ARG 72 72 72 ARG ARG A . n B 2 73 PRO 73 73 73 PRO PRO A . n B 2 74 THR 74 74 74 THR THR A . n B 2 75 VAL 75 75 75 VAL VAL A . n B 2 76 GLN 76 76 76 GLN GLN A . n B 2 77 ALA 77 77 77 ALA ALA A . n B 2 78 ASN 78 78 78 ASN ASN A . n B 2 79 GLU 79 79 79 GLU GLU A . n B 2 80 VAL 80 80 80 VAL VAL A . n B 2 81 SER 81 81 81 SER SER A . n B 2 82 LYS 82 82 82 LYS LYS A . n B 2 83 GLN 83 83 83 GLN GLN A . n B 2 84 GLU 84 84 84 GLU GLU A . n B 2 85 LEU 85 85 85 LEU LEU A . n B 2 86 HIS 86 86 86 HIS HIS A . n B 2 87 ALA 87 87 87 ALA ALA A . n B 2 88 GLY 88 88 88 GLY GLY A . n B 2 89 GLY 89 89 89 GLY GLY A . n B 2 90 ARG 90 90 90 ARG ARG A . n B 2 91 LYS 91 91 91 LYS LYS A . n B 2 92 LEU 92 92 92 LEU LEU A . n B 2 93 ILE 93 93 93 ILE ILE A . n B 2 94 GLU 94 94 94 GLU GLU A . n B 2 95 LYS 95 95 95 LYS LYS A . n B 2 96 ILE 96 96 96 ILE ILE A . n B 2 97 GLU 97 97 97 GLU GLU A . n B 2 98 ASP 98 98 98 ASP ASP A . n B 2 99 TYR 99 99 99 TYR TYR A . n B 2 100 GLN 100 100 100 GLN GLN A . n B 2 101 PRO 101 101 101 PRO PRO A . n B 2 102 GLN 102 102 102 GLN GLN A . n B 2 103 ALA 103 103 103 ALA ALA A . n B 2 104 LEU 104 104 104 LEU LEU A . n B 2 105 ALA 105 105 105 ALA ALA A . n B 2 106 ILE 106 106 106 ILE ILE A . n B 2 107 LEU 107 107 107 LEU LEU A . n B 2 108 GLY 108 108 108 GLY GLY A . n B 2 109 LYS 109 109 109 LYS LYS A . n B 2 110 GLN 110 110 110 GLN GLN A . n B 2 111 ALA 111 111 111 ALA ALA A . n B 2 112 TYR 112 112 112 TYR TYR A . n B 2 113 GLU 113 113 113 GLU GLU A . n B 2 114 GLN 114 114 114 GLN GLN A . n B 2 115 GLY 115 115 115 GLY GLY A . n B 2 116 PHE 116 116 116 PHE PHE A . n B 2 117 SER 117 117 117 SER SER A . n B 2 118 GLN 118 118 118 GLN GLN A . n B 2 119 ARG 119 119 119 ARG ARG A . n B 2 120 GLY 120 120 120 GLY GLY A . n B 2 121 ALA 121 121 121 ALA ALA A . n B 2 122 GLN 122 122 122 GLN GLN A . n B 2 123 TRP 123 123 123 TRP TRP A . n B 2 124 GLY 124 124 124 GLY GLY A . n B 2 125 LYS 125 125 125 LYS LYS A . n B 2 126 GLN 126 126 126 GLN GLN A . n B 2 127 THR 127 127 127 THR THR A . n B 2 128 LEU 128 128 128 LEU LEU A . n B 2 129 THR 129 129 129 THR THR A . n B 2 130 ILE 130 130 130 ILE ILE A . n B 2 131 GLY 131 131 131 GLY GLY A . n B 2 132 SER 132 132 132 SER SER A . n B 2 133 THR 133 133 133 THR THR A . n B 2 134 GLN 134 134 134 GLN GLN A . n B 2 135 ILE 135 135 135 ILE ILE A . n B 2 136 TRP 136 136 136 TRP TRP A . n B 2 137 VAL 137 137 137 VAL VAL A . n B 2 138 LEU 138 138 138 LEU LEU A . n B 2 139 PRO 139 139 139 PRO PRO A . n B 2 140 ASN 140 140 140 ASN ASN A . n B 2 141 PRO 141 141 141 PRO PRO A . n B 2 142 SER 142 142 142 SER SER A . n B 2 143 GLY 143 143 143 GLY GLY A . n B 2 144 LEU 144 144 144 LEU LEU A . n B 2 145 SER 145 145 145 SER SER A . n B 2 146 ARG 146 146 146 ARG ARG A . n B 2 147 VAL 147 147 147 VAL VAL A . n B 2 148 SER 148 148 148 SER SER A . n B 2 149 LEU 149 149 149 LEU LEU A . n B 2 150 GLU 150 150 150 GLU GLU A . n B 2 151 LYS 151 151 151 LYS LYS A . n B 2 152 LEU 152 152 152 LEU LEU A . n B 2 153 VAL 153 153 153 VAL VAL A . n B 2 154 GLU 154 154 154 GLU GLU A . n B 2 155 ALA 155 155 155 ALA ALA A . n B 2 156 TYR 156 156 156 TYR TYR A . n B 2 157 ARG 157 157 157 ARG ARG A . n B 2 158 GLU 158 158 158 GLU GLU A . n B 2 159 LEU 159 159 159 LEU LEU A . n B 2 160 ASP 160 160 160 ASP ASP A . n B 2 161 GLN 161 161 161 GLN GLN A . n B 2 162 ALA 162 162 162 ALA ALA A . n B 2 163 LEU 163 163 163 LEU LEU A . n B 2 164 VAL 164 164 164 VAL VAL A . n B 2 165 VAL 165 165 165 VAL VAL A . n B 2 166 ARG 166 166 ? ? ? A . n B 2 167 GLY 167 167 ? ? ? A . n B 2 168 ARG 168 168 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 13 9 HOH HOH D . C 3 HOH 2 14 12 HOH HOH D . C 3 HOH 3 15 24 HOH HOH D . C 3 HOH 4 16 26 HOH HOH D . C 3 HOH 5 17 30 HOH HOH D . C 3 HOH 6 18 35 HOH HOH D . C 3 HOH 7 19 37 HOH HOH D . C 3 HOH 8 20 51 HOH HOH D . C 3 HOH 9 21 58 HOH HOH D . D 3 HOH 1 169 1 HOH HOH A . D 3 HOH 2 170 2 HOH HOH A . D 3 HOH 3 171 3 HOH HOH A . D 3 HOH 4 172 4 HOH HOH A . D 3 HOH 5 173 5 HOH HOH A . D 3 HOH 6 174 6 HOH HOH A . D 3 HOH 7 175 7 HOH HOH A . D 3 HOH 8 176 8 HOH HOH A . D 3 HOH 9 177 10 HOH HOH A . D 3 HOH 10 178 11 HOH HOH A . D 3 HOH 11 179 13 HOH HOH A . D 3 HOH 12 180 14 HOH HOH A . D 3 HOH 13 181 15 HOH HOH A . D 3 HOH 14 182 16 HOH HOH A . D 3 HOH 15 183 17 HOH HOH A . D 3 HOH 16 184 18 HOH HOH A . D 3 HOH 17 185 19 HOH HOH A . D 3 HOH 18 186 20 HOH HOH A . D 3 HOH 19 187 21 HOH HOH A . D 3 HOH 20 188 22 HOH HOH A . D 3 HOH 21 189 23 HOH HOH A . D 3 HOH 22 190 25 HOH HOH A . D 3 HOH 23 191 27 HOH HOH A . D 3 HOH 24 192 28 HOH HOH A . D 3 HOH 25 193 29 HOH HOH A . D 3 HOH 26 194 31 HOH HOH A . D 3 HOH 27 195 32 HOH HOH A . D 3 HOH 28 196 33 HOH HOH A . D 3 HOH 29 197 34 HOH HOH A . D 3 HOH 30 198 36 HOH HOH A . D 3 HOH 31 199 38 HOH HOH A . D 3 HOH 32 200 39 HOH HOH A . D 3 HOH 33 201 40 HOH HOH A . D 3 HOH 34 202 41 HOH HOH A . D 3 HOH 35 203 42 HOH HOH A . D 3 HOH 36 204 43 HOH HOH A . D 3 HOH 37 205 44 HOH HOH A . D 3 HOH 38 206 45 HOH HOH A . D 3 HOH 39 207 46 HOH HOH A . D 3 HOH 40 208 47 HOH HOH A . D 3 HOH 41 209 48 HOH HOH A . D 3 HOH 42 210 49 HOH HOH A . D 3 HOH 43 211 50 HOH HOH A . D 3 HOH 44 212 52 HOH HOH A . D 3 HOH 45 213 53 HOH HOH A . D 3 HOH 46 214 54 HOH HOH A . D 3 HOH 47 215 55 HOH HOH A . D 3 HOH 48 216 56 HOH HOH A . D 3 HOH 49 217 57 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MET 1 ? CG ? B MET 1 CG 2 1 Y 1 A MET 1 ? SD ? B MET 1 SD 3 1 Y 1 A MET 1 ? CE ? B MET 1 CE 4 1 Y 1 A ARG 119 ? CG ? B ARG 119 CG 5 1 Y 1 A ARG 119 ? CD ? B ARG 119 CD 6 1 Y 1 A ARG 119 ? NE ? B ARG 119 NE 7 1 Y 1 A ARG 119 ? CZ ? B ARG 119 CZ 8 1 Y 1 A ARG 119 ? NH1 ? B ARG 119 NH1 9 1 Y 1 A ARG 119 ? NH2 ? B ARG 119 NH2 10 1 Y 1 A GLU 150 ? CG ? B GLU 150 CG 11 1 Y 1 A GLU 150 ? CD ? B GLU 150 CD 12 1 Y 1 A GLU 150 ? OE1 ? B GLU 150 OE1 13 1 Y 1 A GLU 150 ? OE2 ? B GLU 150 OE2 14 1 Y 1 A LYS 151 ? CG ? B LYS 151 CG 15 1 Y 1 A LYS 151 ? CD ? B LYS 151 CD 16 1 Y 1 A LYS 151 ? CE ? B LYS 151 CE 17 1 Y 1 A LYS 151 ? NZ ? B LYS 151 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 X-PLOR refinement . ? 4 # _cell.entry_id 1MWJ _cell.length_a 101.996 _cell.length_b 101.996 _cell.length_c 45.133 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MWJ _symmetry.space_group_name_H-M 'P 42 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 # _exptl.entry_id 1MWJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 52.78 _exptl_crystal.density_Matthews 2.60 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method MICROBATCH _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details 'PEG4000, Sodium Acetate, pH 4.6, Microbatch, temperature 289K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 PEG4000 ? ? ? 1 2 1 'Sodium Acetate' ? ? ? 1 3 2 'Sodium Acetate' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1998-02-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.488 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SRS BEAMLINE PX7.2' _diffrn_source.pdbx_synchrotron_site SRS _diffrn_source.pdbx_synchrotron_beamline PX7.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.488 # _reflns.entry_id 1MWJ _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 2.85 _reflns.number_obs 5478 _reflns.number_all 5478 _reflns.percent_possible_obs 94.5 _reflns.pdbx_Rmerge_I_obs 0.0870000 _reflns.pdbx_Rsym_value 0.0870000 _reflns.pdbx_netI_over_sigmaI 9.7 _reflns.B_iso_Wilson_estimate 38.2 _reflns.pdbx_redundancy 2.3 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.85 _reflns_shell.d_res_low 2.95 _reflns_shell.percent_possible_all 85.7 _reflns_shell.Rmerge_I_obs 0.2630000 _reflns_shell.pdbx_Rsym_value 0.2630000 _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.pdbx_redundancy 1.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 472 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1MWJ _refine.ls_number_reflns_obs 5254 _refine.ls_number_reflns_all 5478 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 1104323.12 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.ls_d_res_low 14.97 _refine.ls_d_res_high 2.85 _refine.ls_percent_reflns_obs 94.5 _refine.ls_R_factor_obs 0.2300000 _refine.ls_R_factor_all 0.2300000 _refine.ls_R_factor_R_work 0.1900000 _refine.ls_R_factor_R_free 0.2520000 _refine.ls_R_factor_R_free_error 0.017 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.5 _refine.ls_number_reflns_R_free 237 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 22.3 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'NO ELECTRON DENSITY IS OBSERVED FOR RESDUES 166 TO 168 RESIDUES A1, A109, A150 AND A151 WERE REFINED AS ALANINE' _refine.pdbx_starting_model 'Native MuG' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1MWJ _refine_analyze.Luzzati_coordinate_error_obs 0.35 _refine_analyze.Luzzati_sigma_a_obs 0.38 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1275 _refine_hist.pdbx_number_atoms_nucleic_acid 243 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 58 _refine_hist.number_atoms_total 1576 _refine_hist.d_res_high 2.85 _refine_hist.d_res_low 14.97 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function o_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg 1.5 ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d 24.0 ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d 1.17 ? ? ? 'X-RAY DIFFRACTION' ? o_mcbond_it 2.47 1.50 ? ? 'X-RAY DIFFRACTION' ? o_mcangle_it 3.91 2.00 ? ? 'X-RAY DIFFRACTION' ? o_scbond_it 4.01 2.00 ? ? 'X-RAY DIFFRACTION' ? o_scangle_it 5.67 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 2.85 _refine_ls_shell.d_res_low 2.93 _refine_ls_shell.number_reflns_R_work 452 _refine_ls_shell.R_factor_R_work 0.2950000 _refine_ls_shell.percent_reflns_obs 85.2 _refine_ls_shell.R_factor_R_free 0.3670000 _refine_ls_shell.R_factor_R_free_error 0.018 _refine_ls_shell.percent_reflns_R_free 4.00 _refine_ls_shell.number_reflns_R_free 18 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 WATER.PAR WATER.TOP 'X-RAY DIFFRACTION' 3 DNA2.PAR DNA2.TOP 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1MWJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1MWJ _struct.title 'Crystal Structure of a MUG-DNA pseudo substrate complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1MWJ _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'Rossmann Fold, non-hydrolysable DNA-complex, Uracil recognition., HYDROLASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP MUG_ECOLI 2 ;MVEDILAPGLRVVFCGINPGLSSAGTGFPFAHPANRFWKVIYQAGFTDRQLKPQEAQHLLDYRCGVTKLVDRPTVQANEV SKQELHAGGRKLIEKIEDYQPQALAILGKQAYEQGFSQRGAQWGKQTLTIGSTQIWVLPNPSGLSRVSLEKLVEAYRELD QALVVRGR ; 1 P0A9H1 ? 2 PDB 1MWJ 1 ? ? 1MWJ ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1MWJ A 1 ? 168 ? P0A9H1 1 ? 168 ? 1 168 2 2 1MWJ D 1 ? 12 ? 1MWJ 1 ? 12 ? 1 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY B 20 ? GLY B 27 ? GLY A 20 GLY A 27 1 ? 8 HELX_P HELX_P2 2 ARG B 36 ? GLY B 45 ? ARG A 36 GLY A 45 1 ? 10 HELX_P HELX_P3 3 LYS B 52 ? TYR B 62 ? LYS A 52 TYR A 62 5 ? 11 HELX_P HELX_P4 4 GLN B 76 ? VAL B 80 ? GLN A 76 VAL A 80 5 ? 5 HELX_P HELX_P5 5 SER B 81 ? GLN B 100 ? SER A 81 GLN A 100 1 ? 20 HELX_P HELX_P6 6 GLY B 108 ? SER B 117 ? GLY A 108 SER A 117 1 ? 10 HELX_P HELX_P7 7 SER B 148 ? LEU B 163 ? SER A 148 LEU A 163 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 1 O2 ? ? ? 1_555 A DG 6 N1 ? ? D DC 1 D DG 6 7_554 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog2 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DA 5 N6 ? ? D DG 2 D DA 5 7_554 ? ? ? ? ? ? 'DG-DA MISPAIR' ? ? ? hydrog3 hydrog ? ? A DC 3 O2 ? ? ? 1_555 A DG 4 N2 ? ? D DC 3 D DG 4 7_554 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog4 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DC 3 N3 ? ? D DG 4 D DC 3 7_554 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog5 hydrog ? ? A DA 5 N6 ? ? ? 1_555 A DG 2 O6 ? ? D DA 5 D DG 2 7_554 ? ? ? ? ? ? 'DA-DG MISPAIR' ? ? ? hydrog6 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DC 1 O2 ? ? D DG 6 D DC 1 7_554 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 CYS B 64 ? LYS B 68 ? CYS A 64 LYS A 68 A 2 VAL B 12 ? GLY B 16 ? VAL A 12 GLY A 16 A 3 ALA B 103 ? LEU B 107 ? ALA A 103 LEU A 107 A 4 THR B 133 ? LEU B 138 ? THR A 133 LEU A 138 A 5 GLY B 124 ? ILE B 130 ? GLY A 124 ILE A 130 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY B 65 ? O GLY A 65 N PHE B 14 ? N PHE A 14 A 2 3 N VAL B 13 ? N VAL A 13 O ALA B 105 ? O ALA A 105 A 3 4 N LEU B 104 ? N LEU A 104 O GLN B 134 ? O GLN A 134 A 4 5 O VAL B 137 ? O VAL A 137 N GLY B 124 ? N GLY A 124 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C5 _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DT _pdbx_validate_rmsd_bond.auth_seq_id_1 8 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 C7 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DT _pdbx_validate_rmsd_bond.auth_seq_id_2 8 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.536 _pdbx_validate_rmsd_bond.bond_target_value 1.496 _pdbx_validate_rmsd_bond.bond_deviation 0.040 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" D DC 1 ? ? "C1'" D DC 1 ? ? N1 D DC 1 ? ? 110.12 108.30 1.82 0.30 N 2 1 "O4'" D DG 2 ? ? "C1'" D DG 2 ? ? N9 D DG 2 ? ? 110.92 108.30 2.62 0.30 N 3 1 "O4'" D DC 3 ? ? "C1'" D DC 3 ? ? N1 D DC 3 ? ? 110.82 108.30 2.52 0.30 N 4 1 "O4'" D DG 4 ? ? "C1'" D DG 4 ? ? N9 D DG 4 ? ? 110.61 108.30 2.31 0.30 N 5 1 "O4'" D DA 5 ? ? "C1'" D DA 5 ? ? N9 D DA 5 ? ? 110.68 108.30 2.38 0.30 N 6 1 "O4'" D DG 6 ? ? "C1'" D DG 6 ? ? N9 D DG 6 ? ? 110.99 108.30 2.69 0.30 N 7 1 "O4'" D DU 7 ? ? "C1'" D DU 7 ? ? N1 D DU 7 ? ? 111.13 108.30 2.83 0.30 N 8 1 "O4'" D DT 8 ? ? "C1'" D DT 8 ? ? N1 D DT 8 ? ? 111.62 108.30 3.32 0.30 N 9 1 C6 D DT 8 ? ? C5 D DT 8 ? ? C7 D DT 8 ? ? 119.25 122.90 -3.65 0.60 N 10 1 "O4'" D DG 12 ? ? "C1'" D DG 12 ? ? N9 D DG 12 ? ? 110.68 108.30 2.38 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 17 ? ? -63.42 -73.68 2 1 PRO A 141 ? ? -69.17 5.34 # _pdbx_database_remark.id 300 _pdbx_database_remark.text ;BIOMOLECULE THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 2 CHAIN(S). The second strand of the DNA molecule is generated by applying symmetry operator 7_555 : y, x, -z, to DU and bases 8-12, and applying symmetry operator 7_554 : y, x, -1-z, to bases 1-6. ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 166 ? B ARG 166 2 1 Y 1 A GLY 167 ? B GLY 167 3 1 Y 1 A ARG 168 ? B ARG 168 4 1 N 0 A HOH 210 ? D HOH ? 5 1 N 0 A HOH 211 ? D HOH ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 DU OP3 O N N 231 DU P P N N 232 DU OP1 O N N 233 DU OP2 O N N 234 DU "O5'" O N N 235 DU "C5'" C N N 236 DU "C4'" C N R 237 DU "O4'" O N N 238 DU "C3'" C N S 239 DU "O3'" O N N 240 DU "C2'" C N N 241 DU "C1'" C N R 242 DU N1 N N N 243 DU C2 C N N 244 DU O2 O N N 245 DU N3 N N N 246 DU C4 C N N 247 DU O4 O N N 248 DU C5 C N N 249 DU C6 C N N 250 DU HOP3 H N N 251 DU HOP2 H N N 252 DU "H5'" H N N 253 DU "H5''" H N N 254 DU "H4'" H N N 255 DU "H3'" H N N 256 DU "HO3'" H N N 257 DU "H2'" H N N 258 DU "H2''" H N N 259 DU "H1'" H N N 260 DU H3 H N N 261 DU H5 H N N 262 DU H6 H N N 263 GLN N N N N 264 GLN CA C N S 265 GLN C C N N 266 GLN O O N N 267 GLN CB C N N 268 GLN CG C N N 269 GLN CD C N N 270 GLN OE1 O N N 271 GLN NE2 N N N 272 GLN OXT O N N 273 GLN H H N N 274 GLN H2 H N N 275 GLN HA H N N 276 GLN HB2 H N N 277 GLN HB3 H N N 278 GLN HG2 H N N 279 GLN HG3 H N N 280 GLN HE21 H N N 281 GLN HE22 H N N 282 GLN HXT H N N 283 GLU N N N N 284 GLU CA C N S 285 GLU C C N N 286 GLU O O N N 287 GLU CB C N N 288 GLU CG C N N 289 GLU CD C N N 290 GLU OE1 O N N 291 GLU OE2 O N N 292 GLU OXT O N N 293 GLU H H N N 294 GLU H2 H N N 295 GLU HA H N N 296 GLU HB2 H N N 297 GLU HB3 H N N 298 GLU HG2 H N N 299 GLU HG3 H N N 300 GLU HE2 H N N 301 GLU HXT H N N 302 GLY N N N N 303 GLY CA C N N 304 GLY C C N N 305 GLY O O N N 306 GLY OXT O N N 307 GLY H H N N 308 GLY H2 H N N 309 GLY HA2 H N N 310 GLY HA3 H N N 311 GLY HXT H N N 312 HIS N N N N 313 HIS CA C N S 314 HIS C C N N 315 HIS O O N N 316 HIS CB C N N 317 HIS CG C Y N 318 HIS ND1 N Y N 319 HIS CD2 C Y N 320 HIS CE1 C Y N 321 HIS NE2 N Y N 322 HIS OXT O N N 323 HIS H H N N 324 HIS H2 H N N 325 HIS HA H N N 326 HIS HB2 H N N 327 HIS HB3 H N N 328 HIS HD1 H N N 329 HIS HD2 H N N 330 HIS HE1 H N N 331 HIS HE2 H N N 332 HIS HXT H N N 333 HOH O O N N 334 HOH H1 H N N 335 HOH H2 H N N 336 ILE N N N N 337 ILE CA C N S 338 ILE C C N N 339 ILE O O N N 340 ILE CB C N S 341 ILE CG1 C N N 342 ILE CG2 C N N 343 ILE CD1 C N N 344 ILE OXT O N N 345 ILE H H N N 346 ILE H2 H N N 347 ILE HA H N N 348 ILE HB H N N 349 ILE HG12 H N N 350 ILE HG13 H N N 351 ILE HG21 H N N 352 ILE HG22 H N N 353 ILE HG23 H N N 354 ILE HD11 H N N 355 ILE HD12 H N N 356 ILE HD13 H N N 357 ILE HXT H N N 358 LEU N N N N 359 LEU CA C N S 360 LEU C C N N 361 LEU O O N N 362 LEU CB C N N 363 LEU CG C N N 364 LEU CD1 C N N 365 LEU CD2 C N N 366 LEU OXT O N N 367 LEU H H N N 368 LEU H2 H N N 369 LEU HA H N N 370 LEU HB2 H N N 371 LEU HB3 H N N 372 LEU HG H N N 373 LEU HD11 H N N 374 LEU HD12 H N N 375 LEU HD13 H N N 376 LEU HD21 H N N 377 LEU HD22 H N N 378 LEU HD23 H N N 379 LEU HXT H N N 380 LYS N N N N 381 LYS CA C N S 382 LYS C C N N 383 LYS O O N N 384 LYS CB C N N 385 LYS CG C N N 386 LYS CD C N N 387 LYS CE C N N 388 LYS NZ N N N 389 LYS OXT O N N 390 LYS H H N N 391 LYS H2 H N N 392 LYS HA H N N 393 LYS HB2 H N N 394 LYS HB3 H N N 395 LYS HG2 H N N 396 LYS HG3 H N N 397 LYS HD2 H N N 398 LYS HD3 H N N 399 LYS HE2 H N N 400 LYS HE3 H N N 401 LYS HZ1 H N N 402 LYS HZ2 H N N 403 LYS HZ3 H N N 404 LYS HXT H N N 405 MET N N N N 406 MET CA C N S 407 MET C C N N 408 MET O O N N 409 MET CB C N N 410 MET CG C N N 411 MET SD S N N 412 MET CE C N N 413 MET OXT O N N 414 MET H H N N 415 MET H2 H N N 416 MET HA H N N 417 MET HB2 H N N 418 MET HB3 H N N 419 MET HG2 H N N 420 MET HG3 H N N 421 MET HE1 H N N 422 MET HE2 H N N 423 MET HE3 H N N 424 MET HXT H N N 425 PHE N N N N 426 PHE CA C N S 427 PHE C C N N 428 PHE O O N N 429 PHE CB C N N 430 PHE CG C Y N 431 PHE CD1 C Y N 432 PHE CD2 C Y N 433 PHE CE1 C Y N 434 PHE CE2 C Y N 435 PHE CZ C Y N 436 PHE OXT O N N 437 PHE H H N N 438 PHE H2 H N N 439 PHE HA H N N 440 PHE HB2 H N N 441 PHE HB3 H N N 442 PHE HD1 H N N 443 PHE HD2 H N N 444 PHE HE1 H N N 445 PHE HE2 H N N 446 PHE HZ H N N 447 PHE HXT H N N 448 PRO N N N N 449 PRO CA C N S 450 PRO C C N N 451 PRO O O N N 452 PRO CB C N N 453 PRO CG C N N 454 PRO CD C N N 455 PRO OXT O N N 456 PRO H H N N 457 PRO HA H N N 458 PRO HB2 H N N 459 PRO HB3 H N N 460 PRO HG2 H N N 461 PRO HG3 H N N 462 PRO HD2 H N N 463 PRO HD3 H N N 464 PRO HXT H N N 465 SER N N N N 466 SER CA C N S 467 SER C C N N 468 SER O O N N 469 SER CB C N N 470 SER OG O N N 471 SER OXT O N N 472 SER H H N N 473 SER H2 H N N 474 SER HA H N N 475 SER HB2 H N N 476 SER HB3 H N N 477 SER HG H N N 478 SER HXT H N N 479 THR N N N N 480 THR CA C N S 481 THR C C N N 482 THR O O N N 483 THR CB C N R 484 THR OG1 O N N 485 THR CG2 C N N 486 THR OXT O N N 487 THR H H N N 488 THR H2 H N N 489 THR HA H N N 490 THR HB H N N 491 THR HG1 H N N 492 THR HG21 H N N 493 THR HG22 H N N 494 THR HG23 H N N 495 THR HXT H N N 496 TRP N N N N 497 TRP CA C N S 498 TRP C C N N 499 TRP O O N N 500 TRP CB C N N 501 TRP CG C Y N 502 TRP CD1 C Y N 503 TRP CD2 C Y N 504 TRP NE1 N Y N 505 TRP CE2 C Y N 506 TRP CE3 C Y N 507 TRP CZ2 C Y N 508 TRP CZ3 C Y N 509 TRP CH2 C Y N 510 TRP OXT O N N 511 TRP H H N N 512 TRP H2 H N N 513 TRP HA H N N 514 TRP HB2 H N N 515 TRP HB3 H N N 516 TRP HD1 H N N 517 TRP HE1 H N N 518 TRP HE3 H N N 519 TRP HZ2 H N N 520 TRP HZ3 H N N 521 TRP HH2 H N N 522 TRP HXT H N N 523 TYR N N N N 524 TYR CA C N S 525 TYR C C N N 526 TYR O O N N 527 TYR CB C N N 528 TYR CG C Y N 529 TYR CD1 C Y N 530 TYR CD2 C Y N 531 TYR CE1 C Y N 532 TYR CE2 C Y N 533 TYR CZ C Y N 534 TYR OH O N N 535 TYR OXT O N N 536 TYR H H N N 537 TYR H2 H N N 538 TYR HA H N N 539 TYR HB2 H N N 540 TYR HB3 H N N 541 TYR HD1 H N N 542 TYR HD2 H N N 543 TYR HE1 H N N 544 TYR HE2 H N N 545 TYR HH H N N 546 TYR HXT H N N 547 VAL N N N N 548 VAL CA C N S 549 VAL C C N N 550 VAL O O N N 551 VAL CB C N N 552 VAL CG1 C N N 553 VAL CG2 C N N 554 VAL OXT O N N 555 VAL H H N N 556 VAL H2 H N N 557 VAL HA H N N 558 VAL HB H N N 559 VAL HG11 H N N 560 VAL HG12 H N N 561 VAL HG13 H N N 562 VAL HG21 H N N 563 VAL HG22 H N N 564 VAL HG23 H N N 565 VAL HXT H N N 566 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 DU OP3 P sing N N 232 DU OP3 HOP3 sing N N 233 DU P OP1 doub N N 234 DU P OP2 sing N N 235 DU P "O5'" sing N N 236 DU OP2 HOP2 sing N N 237 DU "O5'" "C5'" sing N N 238 DU "C5'" "C4'" sing N N 239 DU "C5'" "H5'" sing N N 240 DU "C5'" "H5''" sing N N 241 DU "C4'" "O4'" sing N N 242 DU "C4'" "C3'" sing N N 243 DU "C4'" "H4'" sing N N 244 DU "O4'" "C1'" sing N N 245 DU "C3'" "O3'" sing N N 246 DU "C3'" "C2'" sing N N 247 DU "C3'" "H3'" sing N N 248 DU "O3'" "HO3'" sing N N 249 DU "C2'" "C1'" sing N N 250 DU "C2'" "H2'" sing N N 251 DU "C2'" "H2''" sing N N 252 DU "C1'" N1 sing N N 253 DU "C1'" "H1'" sing N N 254 DU N1 C2 sing N N 255 DU N1 C6 sing N N 256 DU C2 O2 doub N N 257 DU C2 N3 sing N N 258 DU N3 C4 sing N N 259 DU N3 H3 sing N N 260 DU C4 O4 doub N N 261 DU C4 C5 sing N N 262 DU C5 C6 doub N N 263 DU C5 H5 sing N N 264 DU C6 H6 sing N N 265 GLN N CA sing N N 266 GLN N H sing N N 267 GLN N H2 sing N N 268 GLN CA C sing N N 269 GLN CA CB sing N N 270 GLN CA HA sing N N 271 GLN C O doub N N 272 GLN C OXT sing N N 273 GLN CB CG sing N N 274 GLN CB HB2 sing N N 275 GLN CB HB3 sing N N 276 GLN CG CD sing N N 277 GLN CG HG2 sing N N 278 GLN CG HG3 sing N N 279 GLN CD OE1 doub N N 280 GLN CD NE2 sing N N 281 GLN NE2 HE21 sing N N 282 GLN NE2 HE22 sing N N 283 GLN OXT HXT sing N N 284 GLU N CA sing N N 285 GLU N H sing N N 286 GLU N H2 sing N N 287 GLU CA C sing N N 288 GLU CA CB sing N N 289 GLU CA HA sing N N 290 GLU C O doub N N 291 GLU C OXT sing N N 292 GLU CB CG sing N N 293 GLU CB HB2 sing N N 294 GLU CB HB3 sing N N 295 GLU CG CD sing N N 296 GLU CG HG2 sing N N 297 GLU CG HG3 sing N N 298 GLU CD OE1 doub N N 299 GLU CD OE2 sing N N 300 GLU OE2 HE2 sing N N 301 GLU OXT HXT sing N N 302 GLY N CA sing N N 303 GLY N H sing N N 304 GLY N H2 sing N N 305 GLY CA C sing N N 306 GLY CA HA2 sing N N 307 GLY CA HA3 sing N N 308 GLY C O doub N N 309 GLY C OXT sing N N 310 GLY OXT HXT sing N N 311 HIS N CA sing N N 312 HIS N H sing N N 313 HIS N H2 sing N N 314 HIS CA C sing N N 315 HIS CA CB sing N N 316 HIS CA HA sing N N 317 HIS C O doub N N 318 HIS C OXT sing N N 319 HIS CB CG sing N N 320 HIS CB HB2 sing N N 321 HIS CB HB3 sing N N 322 HIS CG ND1 sing Y N 323 HIS CG CD2 doub Y N 324 HIS ND1 CE1 doub Y N 325 HIS ND1 HD1 sing N N 326 HIS CD2 NE2 sing Y N 327 HIS CD2 HD2 sing N N 328 HIS CE1 NE2 sing Y N 329 HIS CE1 HE1 sing N N 330 HIS NE2 HE2 sing N N 331 HIS OXT HXT sing N N 332 HOH O H1 sing N N 333 HOH O H2 sing N N 334 ILE N CA sing N N 335 ILE N H sing N N 336 ILE N H2 sing N N 337 ILE CA C sing N N 338 ILE CA CB sing N N 339 ILE CA HA sing N N 340 ILE C O doub N N 341 ILE C OXT sing N N 342 ILE CB CG1 sing N N 343 ILE CB CG2 sing N N 344 ILE CB HB sing N N 345 ILE CG1 CD1 sing N N 346 ILE CG1 HG12 sing N N 347 ILE CG1 HG13 sing N N 348 ILE CG2 HG21 sing N N 349 ILE CG2 HG22 sing N N 350 ILE CG2 HG23 sing N N 351 ILE CD1 HD11 sing N N 352 ILE CD1 HD12 sing N N 353 ILE CD1 HD13 sing N N 354 ILE OXT HXT sing N N 355 LEU N CA sing N N 356 LEU N H sing N N 357 LEU N H2 sing N N 358 LEU CA C sing N N 359 LEU CA CB sing N N 360 LEU CA HA sing N N 361 LEU C O doub N N 362 LEU C OXT sing N N 363 LEU CB CG sing N N 364 LEU CB HB2 sing N N 365 LEU CB HB3 sing N N 366 LEU CG CD1 sing N N 367 LEU CG CD2 sing N N 368 LEU CG HG sing N N 369 LEU CD1 HD11 sing N N 370 LEU CD1 HD12 sing N N 371 LEU CD1 HD13 sing N N 372 LEU CD2 HD21 sing N N 373 LEU CD2 HD22 sing N N 374 LEU CD2 HD23 sing N N 375 LEU OXT HXT sing N N 376 LYS N CA sing N N 377 LYS N H sing N N 378 LYS N H2 sing N N 379 LYS CA C sing N N 380 LYS CA CB sing N N 381 LYS CA HA sing N N 382 LYS C O doub N N 383 LYS C OXT sing N N 384 LYS CB CG sing N N 385 LYS CB HB2 sing N N 386 LYS CB HB3 sing N N 387 LYS CG CD sing N N 388 LYS CG HG2 sing N N 389 LYS CG HG3 sing N N 390 LYS CD CE sing N N 391 LYS CD HD2 sing N N 392 LYS CD HD3 sing N N 393 LYS CE NZ sing N N 394 LYS CE HE2 sing N N 395 LYS CE HE3 sing N N 396 LYS NZ HZ1 sing N N 397 LYS NZ HZ2 sing N N 398 LYS NZ HZ3 sing N N 399 LYS OXT HXT sing N N 400 MET N CA sing N N 401 MET N H sing N N 402 MET N H2 sing N N 403 MET CA C sing N N 404 MET CA CB sing N N 405 MET CA HA sing N N 406 MET C O doub N N 407 MET C OXT sing N N 408 MET CB CG sing N N 409 MET CB HB2 sing N N 410 MET CB HB3 sing N N 411 MET CG SD sing N N 412 MET CG HG2 sing N N 413 MET CG HG3 sing N N 414 MET SD CE sing N N 415 MET CE HE1 sing N N 416 MET CE HE2 sing N N 417 MET CE HE3 sing N N 418 MET OXT HXT sing N N 419 PHE N CA sing N N 420 PHE N H sing N N 421 PHE N H2 sing N N 422 PHE CA C sing N N 423 PHE CA CB sing N N 424 PHE CA HA sing N N 425 PHE C O doub N N 426 PHE C OXT sing N N 427 PHE CB CG sing N N 428 PHE CB HB2 sing N N 429 PHE CB HB3 sing N N 430 PHE CG CD1 doub Y N 431 PHE CG CD2 sing Y N 432 PHE CD1 CE1 sing Y N 433 PHE CD1 HD1 sing N N 434 PHE CD2 CE2 doub Y N 435 PHE CD2 HD2 sing N N 436 PHE CE1 CZ doub Y N 437 PHE CE1 HE1 sing N N 438 PHE CE2 CZ sing Y N 439 PHE CE2 HE2 sing N N 440 PHE CZ HZ sing N N 441 PHE OXT HXT sing N N 442 PRO N CA sing N N 443 PRO N CD sing N N 444 PRO N H sing N N 445 PRO CA C sing N N 446 PRO CA CB sing N N 447 PRO CA HA sing N N 448 PRO C O doub N N 449 PRO C OXT sing N N 450 PRO CB CG sing N N 451 PRO CB HB2 sing N N 452 PRO CB HB3 sing N N 453 PRO CG CD sing N N 454 PRO CG HG2 sing N N 455 PRO CG HG3 sing N N 456 PRO CD HD2 sing N N 457 PRO CD HD3 sing N N 458 PRO OXT HXT sing N N 459 SER N CA sing N N 460 SER N H sing N N 461 SER N H2 sing N N 462 SER CA C sing N N 463 SER CA CB sing N N 464 SER CA HA sing N N 465 SER C O doub N N 466 SER C OXT sing N N 467 SER CB OG sing N N 468 SER CB HB2 sing N N 469 SER CB HB3 sing N N 470 SER OG HG sing N N 471 SER OXT HXT sing N N 472 THR N CA sing N N 473 THR N H sing N N 474 THR N H2 sing N N 475 THR CA C sing N N 476 THR CA CB sing N N 477 THR CA HA sing N N 478 THR C O doub N N 479 THR C OXT sing N N 480 THR CB OG1 sing N N 481 THR CB CG2 sing N N 482 THR CB HB sing N N 483 THR OG1 HG1 sing N N 484 THR CG2 HG21 sing N N 485 THR CG2 HG22 sing N N 486 THR CG2 HG23 sing N N 487 THR OXT HXT sing N N 488 TRP N CA sing N N 489 TRP N H sing N N 490 TRP N H2 sing N N 491 TRP CA C sing N N 492 TRP CA CB sing N N 493 TRP CA HA sing N N 494 TRP C O doub N N 495 TRP C OXT sing N N 496 TRP CB CG sing N N 497 TRP CB HB2 sing N N 498 TRP CB HB3 sing N N 499 TRP CG CD1 doub Y N 500 TRP CG CD2 sing Y N 501 TRP CD1 NE1 sing Y N 502 TRP CD1 HD1 sing N N 503 TRP CD2 CE2 doub Y N 504 TRP CD2 CE3 sing Y N 505 TRP NE1 CE2 sing Y N 506 TRP NE1 HE1 sing N N 507 TRP CE2 CZ2 sing Y N 508 TRP CE3 CZ3 doub Y N 509 TRP CE3 HE3 sing N N 510 TRP CZ2 CH2 doub Y N 511 TRP CZ2 HZ2 sing N N 512 TRP CZ3 CH2 sing Y N 513 TRP CZ3 HZ3 sing N N 514 TRP CH2 HH2 sing N N 515 TRP OXT HXT sing N N 516 TYR N CA sing N N 517 TYR N H sing N N 518 TYR N H2 sing N N 519 TYR CA C sing N N 520 TYR CA CB sing N N 521 TYR CA HA sing N N 522 TYR C O doub N N 523 TYR C OXT sing N N 524 TYR CB CG sing N N 525 TYR CB HB2 sing N N 526 TYR CB HB3 sing N N 527 TYR CG CD1 doub Y N 528 TYR CG CD2 sing Y N 529 TYR CD1 CE1 sing Y N 530 TYR CD1 HD1 sing N N 531 TYR CD2 CE2 doub Y N 532 TYR CD2 HD2 sing N N 533 TYR CE1 CZ doub Y N 534 TYR CE1 HE1 sing N N 535 TYR CE2 CZ sing Y N 536 TYR CE2 HE2 sing N N 537 TYR CZ OH sing N N 538 TYR OH HH sing N N 539 TYR OXT HXT sing N N 540 VAL N CA sing N N 541 VAL N H sing N N 542 VAL N H2 sing N N 543 VAL CA C sing N N 544 VAL CA CB sing N N 545 VAL CA HA sing N N 546 VAL C O doub N N 547 VAL C OXT sing N N 548 VAL CB CG1 sing N N 549 VAL CB CG2 sing N N 550 VAL CB HB sing N N 551 VAL CG1 HG11 sing N N 552 VAL CG1 HG12 sing N N 553 VAL CG1 HG13 sing N N 554 VAL CG2 HG21 sing N N 555 VAL CG2 HG22 sing N N 556 VAL CG2 HG23 sing N N 557 VAL OXT HXT sing N N 558 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1MWJ 'double helix' 1MWJ 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 A DG 6 7_554 1.199 -0.069 0.902 -11.994 -14.608 9.311 1 D_DC1:DG6_D D 1 ? D 6 ? ? 1 1 A DG 2 1_555 A DA 5 7_554 -1.344 -3.590 -0.713 8.322 3.305 75.115 2 D_DG2:DA5_D D 2 ? D 5 ? ? ? 1 A DC 3 1_555 A DG 4 7_554 0.004 0.408 0.399 -1.538 -30.451 13.046 3 D_DC3:DG4_D D 3 ? D 4 ? ? 1 1 A DG 4 1_555 A DC 3 7_554 -0.004 0.408 0.399 1.538 -30.451 13.046 4 D_DG4:DC3_D D 4 ? D 3 ? ? 1 1 A DA 5 1_555 A DG 2 7_554 1.344 3.590 0.713 -8.322 -3.305 -75.115 5 D_DA5:DG2_D D 5 ? D 2 ? ? ? 1 A DG 6 1_555 A DC 1 7_554 -1.199 -0.069 0.902 11.994 -14.608 9.311 6 D_DG6:DC1_D D 6 ? D 1 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 A DG 6 7_554 A DG 2 1_555 A DA 5 7_554 -0.990 2.968 -0.572 165.609 -25.459 -173.121 -1.487 -0.511 -0.485 12.731 82.815 -179.255 1 DD_DC1DG2:DA5DG6_DD D 1 ? D 6 ? D 2 ? D 5 ? 1 A DG 2 1_555 A DA 5 7_554 A DC 3 1_555 A DG 4 7_554 0.626 3.713 1.153 -136.270 113.529 -31.141 -1.768 0.419 -1.516 -57.381 -68.875 -177.462 2 DD_DG2DC3:DG4DA5_DD D 2 ? D 5 ? D 3 ? D 4 ? 1 A DC 3 1_555 A DG 4 7_554 A DG 4 1_555 A DC 3 7_554 0.000 1.005 3.316 0.000 12.485 33.352 -0.305 0.000 3.460 20.866 0.000 35.550 3 DD_DC3DG4:DC3DG4_DD D 3 ? D 4 ? D 4 ? D 3 ? 1 A DG 4 1_555 A DC 3 7_554 A DA 5 1_555 A DG 2 7_554 1.516 -1.619 3.253 -2.538 0.707 79.597 -1.283 -1.251 3.200 0.552 1.982 79.633 4 DD_DG4DA5:DG2DC3_DD D 4 ? D 3 ? D 5 ? D 2 ? 1 A DA 5 1_555 A DG 2 7_554 A DG 6 1_555 A DC 1 7_554 -0.485 1.461 2.784 0.747 12.423 -17.480 -7.535 -1.087 1.451 -35.599 2.140 -21.429 5 DD_DA5DG6:DC1DG2_DD D 5 ? D 2 ? D 6 ? D 1 ? # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'Native MuG' # _atom_sites.entry_id 1MWJ _atom_sites.fract_transf_matrix[1][1] 0.009804 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009804 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022157 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_