HEADER OXIDOREDUCTASE 07-OCT-02 1MZF TITLE HUMAN FACTOR INHIBITING HIF (FIH1) IN COMPLEX WITH 2-OXOGLUTARATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FACTOR INHIBITING HIF1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FIH-1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FIH-1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHIS-PARALLEL KEYWDS BETA-JELLYROLL, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR C.E.DANN III,R.K.BRUICK,J.DEISENHOFER REVDAT 6 03-APR-24 1MZF 1 REMARK REVDAT 5 14-FEB-24 1MZF 1 REMARK SEQADV LINK REVDAT 4 13-JUL-11 1MZF 1 VERSN REVDAT 3 24-FEB-09 1MZF 1 VERSN REVDAT 2 02-NOV-04 1MZF 1 JRNL REMARK MASTER REVDAT 1 20-NOV-02 1MZF 0 JRNL AUTH C.E.DANN III,R.K.BRUICK,J.DEISENHOFER JRNL TITL STRUCTURE OF FACTOR-INHIBITING HYPOXIA-INDUCIBLE FACTOR 1: JRNL TITL 2 AN ASPARAGINYL HYDROXYLASE INVOLVED IN THE HYPOXIC RESPONSE JRNL TITL 3 PATHWAY. JRNL REF PROC.NATL.ACAD.SCI.USA V. 99 15351 2002 JRNL REFN ISSN 0027-8424 JRNL PMID 12432100 JRNL DOI 10.1073/PNAS.202614999 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.93 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 21549 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1082 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.008 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.51 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2356 REMARK 3 BIN R VALUE (WORKING SET) : 0.2940 REMARK 3 BIN FREE R VALUE : 0.2930 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 134 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.025 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2761 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 11 REMARK 3 SOLVENT ATOMS : 50 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.03000 REMARK 3 B22 (A**2) : -4.03000 REMARK 3 B33 (A**2) : 8.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM SIGMAA (A) : 0.29 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.35 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : CNS BULK SOLVENT MODEL USED REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 51.84 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : AKG.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : AKG.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1MZF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-OCT-02. REMARK 100 THE DEPOSITION ID IS D_1000017329. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-SEP-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0781 REMARK 200 MONOCHROMATOR : SI GRATING REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21549 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 47.110 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.43700 REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: FIH-1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: POTASSIUM TARTRATE, CAPSO, IRON(II) REMARK 280 SULFATE, 2-OXOGLUTARATE, GLYCEROL, PH 9.6, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.90500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.23000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.23000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.95250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.23000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.23000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 110.85750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.23000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.23000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 36.95250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.23000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.23000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 110.85750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 73.90500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 43.23000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 43.23000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 36.95250 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 4260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 86.46000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 86.46000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 73.90500 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 THR A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 GLU A 7 REMARK 465 ALA A 8 REMARK 465 VAL A 9 REMARK 465 ALA A 10 REMARK 465 SER A 11 REMARK 465 GLY A 12 REMARK 465 ARG A 138 REMARK 465 GLY A 139 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 29 CG CD OE1 OE2 REMARK 480 GLU A 79 CG CD OE1 OE2 REMARK 480 ASN A 87 CG OD1 ND2 REMARK 480 LEU A 101 CG CD1 CD2 REMARK 480 TYR A 102 CG CD1 CD2 CE1 CE2 CZ OH REMARK 480 LYS A 106 CG CD CE NZ REMARK 480 LYS A 115 CG CD CE NZ REMARK 480 ARG A 117 CG CD NE CZ NH1 NH2 REMARK 480 GLU A 141 CG CD OE1 OE2 REMARK 480 ASN A 151 CG OD1 ND2 REMARK 480 ASN A 294 CG OD1 ND2 REMARK 480 LYS A 304 CG CD CE NZ REMARK 480 ARG A 305 CG CD NE CZ NH1 NH2 REMARK 480 GLU A 307 CG CD OE1 OE2 REMARK 480 LYS A 311 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CD1 ILE A 344 CD1 ILE A 344 8665 1.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 121 120.29 179.05 REMARK 500 LEU A 150 54.42 -97.52 REMARK 500 SER A 184 168.08 179.55 REMARK 500 ARG A 238 -2.74 81.55 REMARK 500 ASN A 246 73.53 -160.79 REMARK 500 ASN A 254 0.04 -69.95 REMARK 500 TYR A 276 -5.81 80.67 REMARK 500 ASN A 332 114.15 -171.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 400 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 199 NE2 REMARK 620 2 ASP A 201 OD2 98.8 REMARK 620 3 HIS A 279 NE2 89.4 83.7 REMARK 620 4 AKG A 600 O5 93.3 161.7 110.2 REMARK 620 5 AKG A 600 O1 152.6 88.3 117.8 74.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE2 A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKG A 600 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1MZE RELATED DB: PDB DBREF 1MZF A 1 349 UNP Q9NWT6 HIF1N_HUMAN 1 349 SEQADV 1MZF GLY A -1 UNP Q9NWT6 CLONING ARTIFACT SEQADV 1MZF ALA A 0 UNP Q9NWT6 CLONING ARTIFACT SEQRES 1 A 351 GLY ALA MET ALA ALA THR ALA ALA GLU ALA VAL ALA SER SEQRES 2 A 351 GLY SER GLY GLU PRO ARG GLU GLU ALA GLY ALA LEU GLY SEQRES 3 A 351 PRO ALA TRP ASP GLU SER GLN LEU ARG SER TYR SER PHE SEQRES 4 A 351 PRO THR ARG PRO ILE PRO ARG LEU SER GLN SER ASP PRO SEQRES 5 A 351 ARG ALA GLU GLU LEU ILE GLU ASN GLU GLU PRO VAL VAL SEQRES 6 A 351 LEU THR ASP THR ASN LEU VAL TYR PRO ALA LEU LYS TRP SEQRES 7 A 351 ASP LEU GLU TYR LEU GLN GLU ASN ILE GLY ASN GLY ASP SEQRES 8 A 351 PHE SER VAL TYR SER ALA SER THR HIS LYS PHE LEU TYR SEQRES 9 A 351 TYR ASP GLU LYS LYS MET ALA ASN PHE GLN ASN PHE LYS SEQRES 10 A 351 PRO ARG SER ASN ARG GLU GLU MET LYS PHE HIS GLU PHE SEQRES 11 A 351 VAL GLU LYS LEU GLN ASP ILE GLN GLN ARG GLY GLY GLU SEQRES 12 A 351 GLU ARG LEU TYR LEU GLN GLN THR LEU ASN ASP THR VAL SEQRES 13 A 351 GLY ARG LYS ILE VAL MET ASP PHE LEU GLY PHE ASN TRP SEQRES 14 A 351 ASN TRP ILE ASN LYS GLN GLN GLY LYS ARG GLY TRP GLY SEQRES 15 A 351 GLN LEU THR SER ASN LEU LEU LEU ILE GLY MET GLU GLY SEQRES 16 A 351 ASN VAL THR PRO ALA HIS TYR ASP GLU GLN GLN ASN PHE SEQRES 17 A 351 PHE ALA GLN ILE LYS GLY TYR LYS ARG CYS ILE LEU PHE SEQRES 18 A 351 PRO PRO ASP GLN PHE GLU CYS LEU TYR PRO TYR PRO VAL SEQRES 19 A 351 HIS HIS PRO CYS ASP ARG GLN SER GLN VAL ASP PHE ASP SEQRES 20 A 351 ASN PRO ASP TYR GLU ARG PHE PRO ASN PHE GLN ASN VAL SEQRES 21 A 351 VAL GLY TYR GLU THR VAL VAL GLY PRO GLY ASP VAL LEU SEQRES 22 A 351 TYR ILE PRO MET TYR TRP TRP HIS HIS ILE GLU SER LEU SEQRES 23 A 351 LEU ASN GLY GLY ILE THR ILE THR VAL ASN PHE TRP TYR SEQRES 24 A 351 LYS GLY ALA PRO THR PRO LYS ARG ILE GLU TYR PRO LEU SEQRES 25 A 351 LYS ALA HIS GLN LYS VAL ALA ILE MET ARG ASN ILE GLU SEQRES 26 A 351 LYS MET LEU GLY GLU ALA LEU GLY ASN PRO GLN GLU VAL SEQRES 27 A 351 GLY PRO LEU LEU ASN THR MET ILE LYS GLY ARG TYR ASN HET FE2 A 400 1 HET AKG A 600 10 HETNAM FE2 FE (II) ION HETNAM AKG 2-OXOGLUTARIC ACID FORMUL 2 FE2 FE 2+ FORMUL 3 AKG C5 H6 O5 FORMUL 4 HOH *50(H2 O) HELIX 1 1 ASP A 28 LEU A 32 5 5 HELIX 2 2 ASP A 49 ASN A 58 1 10 HELIX 3 3 VAL A 70 TRP A 76 5 7 HELIX 4 4 ASP A 77 ILE A 85 1 9 HELIX 5 5 ASP A 104 PHE A 111 5 8 HELIX 6 6 PHE A 125 GLN A 136 1 12 HELIX 7 7 GLY A 155 GLY A 164 1 10 HELIX 8 8 ASN A 166 GLY A 178 1 13 HELIX 9 9 PRO A 220 ASP A 222 5 3 HELIX 10 10 GLN A 223 TYR A 228 1 6 HELIX 11 11 PHE A 252 VAL A 258 5 7 HELIX 12 12 LYS A 311 LEU A 330 1 20 HELIX 13 13 ASN A 332 GLN A 334 5 3 HELIX 14 14 GLU A 335 LYS A 345 1 11 SHEET 1 A 5 THR A 39 PRO A 41 0 SHEET 2 A 5 GLY A 260 VAL A 265 1 O GLU A 262 N ARG A 40 SHEET 3 A 5 LYS A 214 PHE A 219 -1 N LEU A 218 O TYR A 261 SHEET 4 A 5 TRP A 278 SER A 283 -1 O HIS A 280 N ILE A 217 SHEET 5 A 5 VAL A 195 TYR A 200 -1 N THR A 196 O ILE A 281 SHEET 1 B 9 ARG A 44 LEU A 45 0 SHEET 2 B 9 VAL A 62 LEU A 64 1 O VAL A 63 N LEU A 45 SHEET 3 B 9 VAL A 270 ILE A 273 -1 O VAL A 270 N LEU A 64 SHEET 4 B 9 GLN A 204 LYS A 211 -1 N ASN A 205 O ILE A 273 SHEET 5 B 9 THR A 290 TYR A 297 -1 O TYR A 297 N GLN A 204 SHEET 6 B 9 LEU A 182 GLY A 190 -1 N LEU A 188 O THR A 292 SHEET 7 B 9 ARG A 143 THR A 149 -1 N GLN A 148 O LEU A 187 SHEET 8 B 9 ASP A 89 ALA A 95 -1 N TYR A 93 O TYR A 145 SHEET 9 B 9 GLU A 122 LYS A 124 -1 O MET A 123 N PHE A 90 LINK NE2 HIS A 199 FE FE2 A 400 1555 1555 2.25 LINK OD2 ASP A 201 FE FE2 A 400 1555 1555 2.49 LINK NE2 HIS A 279 FE FE2 A 400 1555 1555 2.24 LINK FE FE2 A 400 O5 AKG A 600 1555 1555 2.31 LINK FE FE2 A 400 O1 AKG A 600 1555 1555 1.87 CISPEP 1 TYR A 308 PRO A 309 0 -0.37 SITE 1 AC1 4 HIS A 199 ASP A 201 HIS A 279 AKG A 600 SITE 1 AC2 12 TYR A 145 LEU A 188 THR A 196 HIS A 199 SITE 2 AC2 12 ASP A 201 ASN A 205 PHE A 207 LYS A 214 SITE 3 AC2 12 HIS A 279 ILE A 281 TRP A 296 FE2 A 400 CRYST1 86.460 86.460 147.810 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011566 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011566 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006765 0.00000