data_1N2F # _entry.id 1N2F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1N2F RCSB RCSB017433 WWPDB D_1000017433 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1N2F _pdbx_database_status.recvd_initial_deposition_date 2002-10-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lesniak, J.' 1 'Barton, W.A.' 2 'Nikolov, D.B.' 3 # _citation.id primary _citation.title 'Structural and functional characterization of the Pseudomonas hydroperoxide resistance protein Ohr' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 21 _citation.page_first 6649 _citation.page_last 6659 _citation.year 2002 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12485986 _citation.pdbx_database_id_DOI 10.1093/emboj/cdf670 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Lesniak, J.' 1 primary 'Barton, W.A.' 2 primary 'Nikolov, D.B.' 3 # _cell.entry_id 1N2F _cell.length_a 39.911 _cell.length_b 77.510 _cell.length_c 43.079 _cell.angle_alpha 90.00 _cell.angle_beta 116.28 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1N2F _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Organic Hydroperoxide Resistance Protein' 14590.513 2 ? ? ? ? 2 non-polymer syn 2,3-DIHYDROXY-1,4-DITHIOBUTANE 154.251 2 ? ? ? ? 3 water nat water 18.015 170 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MQTIKALYTATATATGGRDGRAVSSDGVLDVKLSTPREMGGQGGAATNPEQLFAAGYSACFIGAMKFVAGQRKQTLPADA SITGKVGIGQIPGGFGLEVELHINLPGMEREAAEALVAAAHQVCPYSNATRGNIDVRLNVSV ; _entity_poly.pdbx_seq_one_letter_code_can ;MQTIKALYTATATATGGRDGRAVSSDGVLDVKLSTPREMGGQGGAATNPEQLFAAGYSACFIGAMKFVAGQRKQTLPADA SITGKVGIGQIPGGFGLEVELHINLPGMEREAAEALVAAAHQVCPYSNATRGNIDVRLNVSV ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLN n 1 3 THR n 1 4 ILE n 1 5 LYS n 1 6 ALA n 1 7 LEU n 1 8 TYR n 1 9 THR n 1 10 ALA n 1 11 THR n 1 12 ALA n 1 13 THR n 1 14 ALA n 1 15 THR n 1 16 GLY n 1 17 GLY n 1 18 ARG n 1 19 ASP n 1 20 GLY n 1 21 ARG n 1 22 ALA n 1 23 VAL n 1 24 SER n 1 25 SER n 1 26 ASP n 1 27 GLY n 1 28 VAL n 1 29 LEU n 1 30 ASP n 1 31 VAL n 1 32 LYS n 1 33 LEU n 1 34 SER n 1 35 THR n 1 36 PRO n 1 37 ARG n 1 38 GLU n 1 39 MET n 1 40 GLY n 1 41 GLY n 1 42 GLN n 1 43 GLY n 1 44 GLY n 1 45 ALA n 1 46 ALA n 1 47 THR n 1 48 ASN n 1 49 PRO n 1 50 GLU n 1 51 GLN n 1 52 LEU n 1 53 PHE n 1 54 ALA n 1 55 ALA n 1 56 GLY n 1 57 TYR n 1 58 SER n 1 59 ALA n 1 60 CYS n 1 61 PHE n 1 62 ILE n 1 63 GLY n 1 64 ALA n 1 65 MET n 1 66 LYS n 1 67 PHE n 1 68 VAL n 1 69 ALA n 1 70 GLY n 1 71 GLN n 1 72 ARG n 1 73 LYS n 1 74 GLN n 1 75 THR n 1 76 LEU n 1 77 PRO n 1 78 ALA n 1 79 ASP n 1 80 ALA n 1 81 SER n 1 82 ILE n 1 83 THR n 1 84 GLY n 1 85 LYS n 1 86 VAL n 1 87 GLY n 1 88 ILE n 1 89 GLY n 1 90 GLN n 1 91 ILE n 1 92 PRO n 1 93 GLY n 1 94 GLY n 1 95 PHE n 1 96 GLY n 1 97 LEU n 1 98 GLU n 1 99 VAL n 1 100 GLU n 1 101 LEU n 1 102 HIS n 1 103 ILE n 1 104 ASN n 1 105 LEU n 1 106 PRO n 1 107 GLY n 1 108 MET n 1 109 GLU n 1 110 ARG n 1 111 GLU n 1 112 ALA n 1 113 ALA n 1 114 GLU n 1 115 ALA n 1 116 LEU n 1 117 VAL n 1 118 ALA n 1 119 ALA n 1 120 ALA n 1 121 HIS n 1 122 GLN n 1 123 VAL n 1 124 CYS n 1 125 PRO n 1 126 TYR n 1 127 SER n 1 128 ASN n 1 129 ALA n 1 130 THR n 1 131 ARG n 1 132 GLY n 1 133 ASN n 1 134 ILE n 1 135 ASP n 1 136 VAL n 1 137 ARG n 1 138 LEU n 1 139 ASN n 1 140 VAL n 1 141 SER n 1 142 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Pseudomonas _entity_src_gen.pdbx_gene_src_gene ohr _entity_src_gen.gene_src_species 'Pseudomonas aeruginosa' _entity_src_gen.gene_src_strain PAO1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudomonas aeruginosa' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 208964 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type pET _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9HZZ3_PSEAE _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MQTIKALYTATATATGGRDGRAVSSDGVLDVKLSTPRELGGQGGAATNPEQLFAAGYSACFIGALKFVAGQRKQTLPADA SITGKVGIGQIPGGFGLEVELHINLPGLEREAAEALVAAAHQVCPYSNATRGNIDVRLNVSV ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession Q9HZZ3 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1N2F A 1 ? 142 ? Q9HZZ3 1 ? 142 ? 1 142 2 1 1N2F B 1 ? 142 ? Q9HZZ3 1 ? 142 ? 1 142 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1N2F MET A 39 ? UNP Q9HZZ3 LEU 39 'SEE REMARK 999' 39 1 1 1N2F MET A 65 ? UNP Q9HZZ3 LEU 65 'SEE REMARK 999' 65 2 1 1N2F MET A 108 ? UNP Q9HZZ3 LEU 108 'SEE REMARK 999' 108 3 2 1N2F MET B 39 ? UNP Q9HZZ3 LEU 39 'SEE REMARK 999' 39 4 2 1N2F MET B 65 ? UNP Q9HZZ3 LEU 65 'SEE REMARK 999' 65 5 2 1N2F MET B 108 ? UNP Q9HZZ3 LEU 108 'SEE REMARK 999' 108 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DTT non-polymer . 2,3-DIHYDROXY-1,4-DITHIOBUTANE 1,4-DITHIOTHREITOL 'C4 H10 O2 S2' 154.251 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1N2F _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.05 _exptl_crystal.density_percent_sol 39.90 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_details 'pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2002-02-26 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SAGITALLY FOCUSED Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.979 1.0 2 0.961 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X9A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X9A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.979,0.979,0.961 # _reflns.entry_id 1N2F _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 30.00 _reflns.d_resolution_high 2.00 _reflns.number_obs 29936 _reflns.number_all 30862 _reflns.percent_possible_obs 97.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 9.9 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.09 _reflns_shell.percent_possible_all 96.5 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1N2F _refine.ls_number_reflns_obs 29679 _refine.ls_number_reflns_all 29679 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 377931.62 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.ls_d_res_low 19.95 _refine.ls_d_res_high 2.01 _refine.ls_percent_reflns_obs 96.2 _refine.ls_R_factor_obs 0.22 _refine.ls_R_factor_all 0.23 _refine.ls_R_factor_R_work 0.22 _refine.ls_R_factor_R_free 0.243 _refine.ls_R_factor_R_free_error 0.005 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.6 _refine.ls_number_reflns_R_free 2848 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 18.3 _refine.aniso_B[1][1] -2.47 _refine.aniso_B[2][2] 0.54 _refine.aniso_B[3][3] 1.93 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 1.19 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.455286 _refine.solvent_model_param_bsol 56.4685 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model OVERALL _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF 377931.62 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1N2F _refine_analyze.Luzzati_coordinate_error_obs 0.24 _refine_analyze.Luzzati_sigma_a_obs 0.16 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.28 _refine_analyze.Luzzati_sigma_a_free 0.18 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2034 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 170 _refine_hist.number_atoms_total 2220 _refine_hist.d_res_high 2.01 _refine_hist.d_res_low 19.95 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.81 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_restr_ncs.dom_id 1 _refine_ls_restr_ncs.ncs_model_details CONSTR _refine_ls_restr_ncs.rms_dev_position ? _refine_ls_restr_ncs.weight_position ? _refine_ls_restr_ncs.rms_dev_B_iso ? _refine_ls_restr_ncs.weight_B_iso ? _refine_ls_restr_ncs.pdbx_type . _refine_ls_restr_ncs.pdbx_auth_asym_id . _refine_ls_restr_ncs.pdbx_ens_id 1 _refine_ls_restr_ncs.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_restr_ncs.pdbx_ordinal 1 _refine_ls_restr_ncs.pdbx_number ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.01 _refine_ls_shell.d_res_low 2.13 _refine_ls_shell.number_reflns_R_work 3866 _refine_ls_shell.R_factor_R_work 0.254 _refine_ls_shell.percent_reflns_obs 83.3 _refine_ls_shell.R_factor_R_free 0.287 _refine_ls_shell.R_factor_R_free_error 0.013 _refine_ls_shell.percent_reflns_R_free 10.6 _refine_ls_shell.number_reflns_R_free 460 _refine_ls_shell.number_reflns_obs 29679 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER_REP.PARAM 'X-RAY DIFFRACTION' 3 DTT.PAR DTT.TOP 'X-RAY DIFFRACTION' # _struct_ncs_dom.id 1 _struct_ncs_dom.details ? _struct_ncs_dom.pdbx_ens_id 1 # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? _struct_ncs_ens.point_group ? # _struct.entry_id 1N2F _struct.title 'CRYSTAL STRUCTURE OF P. AERUGINOSA OHR' _struct.pdbx_descriptor 'organic hydroperoxide resistance protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1N2F _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'Peroxide reductase, OXIDOREDUCTASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 36 ? GLY A 40 ? PRO A 36 GLY A 40 5 ? 5 HELX_P HELX_P2 2 ASN A 48 ? LYS A 73 ? ASN A 48 LYS A 73 1 ? 26 HELX_P HELX_P3 3 GLU A 109 ? CYS A 124 ? GLU A 109 CYS A 124 1 ? 16 HELX_P HELX_P4 4 CYS A 124 ? ARG A 131 ? CYS A 124 ARG A 131 1 ? 8 HELX_P HELX_P5 5 PRO B 36 ? GLY B 40 ? PRO B 36 GLY B 40 5 ? 5 HELX_P HELX_P6 6 ASN B 48 ? LYS B 73 ? ASN B 48 LYS B 73 1 ? 26 HELX_P HELX_P7 7 GLU B 109 ? CYS B 124 ? GLU B 109 CYS B 124 1 ? 16 HELX_P HELX_P8 8 CYS B 124 ? THR B 130 ? CYS B 124 THR B 130 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 30 ? LEU A 33 ? ASP A 30 LEU A 33 A 2 GLY A 20 ? SER A 24 ? GLY A 20 SER A 24 A 3 TYR A 8 ? THR A 15 ? TYR A 8 THR A 15 A 4 SER B 81 ? ILE B 91 ? SER B 81 ILE B 91 A 5 GLY B 94 ? ASN B 104 ? GLY B 94 ASN B 104 A 6 VAL B 136 ? SER B 141 ? VAL B 136 SER B 141 B 1 ASP A 135 ? SER A 141 ? ASP A 135 SER A 141 B 2 GLY A 94 ? ASN A 104 ? GLY A 94 ASN A 104 B 3 SER A 81 ? ILE A 91 ? SER A 81 ILE A 91 B 4 ALA B 6 ? THR B 15 ? ALA B 6 THR B 15 B 5 GLY B 20 ? SER B 24 ? GLY B 20 SER B 24 B 6 ASP B 30 ? LEU B 33 ? ASP B 30 LEU B 33 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 33 ? O LEU A 33 N GLY A 20 ? N GLY A 20 A 2 3 O ARG A 21 ? O ARG A 21 N THR A 15 ? N THR A 15 A 3 4 N ALA A 14 ? N ALA A 14 O ILE B 82 ? O ILE B 82 A 4 5 N GLY B 89 ? N GLY B 89 O GLY B 96 ? O GLY B 96 A 5 6 N ILE B 103 ? N ILE B 103 O SER B 141 ? O SER B 141 B 1 2 O SER A 141 ? O SER A 141 N ILE A 103 ? N ILE A 103 B 2 3 O GLY A 96 ? O GLY A 96 N GLY A 89 ? N GLY A 89 B 3 4 N ILE A 88 ? N ILE A 88 O LEU B 7 ? O LEU B 7 B 4 5 N THR B 15 ? N THR B 15 O ARG B 21 ? O ARG B 21 B 5 6 N GLY B 20 ? N GLY B 20 O LEU B 33 ? O LEU B 33 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE DTT A 171' AC2 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE DTT B 172' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 CYS A 60 ? CYS A 60 . ? 1_555 ? 2 AC1 8 GLY A 63 ? GLY A 63 . ? 1_555 ? 3 AC1 8 ALA A 64 ? ALA A 64 . ? 1_555 ? 4 AC1 8 PHE A 67 ? PHE A 67 . ? 1_555 ? 5 AC1 8 PRO A 125 ? PRO A 125 . ? 1_555 ? 6 AC1 8 HOH E . ? HOH A 197 . ? 1_555 ? 7 AC1 8 ARG B 18 ? ARG B 18 . ? 1_555 ? 8 AC1 8 PHE B 95 ? PHE B 95 . ? 1_555 ? 9 AC2 7 ARG A 18 ? ARG A 18 . ? 1_555 ? 10 AC2 7 PHE A 95 ? PHE A 95 . ? 1_555 ? 11 AC2 7 CYS B 60 ? CYS B 60 . ? 1_555 ? 12 AC2 7 GLY B 63 ? GLY B 63 . ? 1_555 ? 13 AC2 7 ALA B 64 ? ALA B 64 . ? 1_555 ? 14 AC2 7 PHE B 67 ? PHE B 67 . ? 1_555 ? 15 AC2 7 PRO B 125 ? PRO B 125 . ? 1_555 ? # _database_PDB_matrix.entry_id 1N2F _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1N2F _atom_sites.fract_transf_matrix[1][1] 0.025056 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.012372 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012902 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025889 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 THR 3 3 3 THR THR A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 TYR 8 8 8 TYR TYR A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 ARG 37 37 37 ARG ARG A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 MET 39 39 39 MET MET A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 GLN 42 42 42 GLN ALA A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 ASN 48 48 48 ASN ASN A . n A 1 49 PRO 49 49 49 PRO PRO A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 GLN 51 51 51 GLN GLN A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 TYR 57 57 57 TYR TYR A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 CYS 60 60 60 CYS CYS A . n A 1 61 PHE 61 61 61 PHE PHE A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 MET 65 65 65 MET MET A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 PHE 67 67 67 PHE PHE A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 GLN 71 71 71 GLN GLN A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 GLN 74 74 74 GLN GLN A . n A 1 75 THR 75 75 75 THR THR A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 THR 83 83 83 THR THR A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 ILE 91 91 91 ILE ILE A . n A 1 92 PRO 92 92 92 PRO PRO A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 PHE 95 95 95 PHE PHE A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 GLU 98 98 98 GLU GLU A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 HIS 102 102 102 HIS HIS A . n A 1 103 ILE 103 103 103 ILE ILE A . n A 1 104 ASN 104 104 104 ASN ASN A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 PRO 106 106 106 PRO PRO A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 MET 108 108 108 MET MET A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 ARG 110 110 110 ARG ARG A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 ALA 113 113 113 ALA ALA A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 ALA 115 115 115 ALA ALA A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 ALA 120 120 120 ALA ALA A . n A 1 121 HIS 121 121 121 HIS HIS A . n A 1 122 GLN 122 122 122 GLN GLN A . n A 1 123 VAL 123 123 123 VAL VAL A . n A 1 124 CYS 124 124 124 CYS CYS A . n A 1 125 PRO 125 125 125 PRO PRO A . n A 1 126 TYR 126 126 126 TYR TYR A . n A 1 127 SER 127 127 127 SER SER A . n A 1 128 ASN 128 128 128 ASN ASN A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 THR 130 130 130 THR THR A . n A 1 131 ARG 131 131 131 ARG ARG A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 ASN 133 133 133 ASN ASN A . n A 1 134 ILE 134 134 134 ILE ILE A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 ARG 137 137 137 ARG ARG A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 ASN 139 139 139 ASN ASN A . n A 1 140 VAL 140 140 140 VAL VAL A . n A 1 141 SER 141 141 141 SER SER A . n A 1 142 VAL 142 142 142 VAL VAL A . n B 1 1 MET 1 1 1 MET MET B . n B 1 2 GLN 2 2 2 GLN GLN B . n B 1 3 THR 3 3 3 THR THR B . n B 1 4 ILE 4 4 4 ILE ILE B . n B 1 5 LYS 5 5 5 LYS LYS B . n B 1 6 ALA 6 6 6 ALA ALA B . n B 1 7 LEU 7 7 7 LEU LEU B . n B 1 8 TYR 8 8 8 TYR TYR B . n B 1 9 THR 9 9 9 THR THR B . n B 1 10 ALA 10 10 10 ALA ALA B . n B 1 11 THR 11 11 11 THR THR B . n B 1 12 ALA 12 12 12 ALA ALA B . n B 1 13 THR 13 13 13 THR THR B . n B 1 14 ALA 14 14 14 ALA ALA B . n B 1 15 THR 15 15 15 THR THR B . n B 1 16 GLY 16 16 16 GLY GLY B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 ARG 18 18 18 ARG ARG B . n B 1 19 ASP 19 19 19 ASP ASP B . n B 1 20 GLY 20 20 20 GLY GLY B . n B 1 21 ARG 21 21 21 ARG ARG B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 VAL 23 23 23 VAL VAL B . n B 1 24 SER 24 24 24 SER SER B . n B 1 25 SER 25 25 25 SER SER B . n B 1 26 ASP 26 26 26 ASP ASP B . n B 1 27 GLY 27 27 27 GLY GLY B . n B 1 28 VAL 28 28 28 VAL VAL B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 ASP 30 30 30 ASP ASP B . n B 1 31 VAL 31 31 31 VAL VAL B . n B 1 32 LYS 32 32 32 LYS LYS B . n B 1 33 LEU 33 33 33 LEU LEU B . n B 1 34 SER 34 34 34 SER SER B . n B 1 35 THR 35 35 35 THR THR B . n B 1 36 PRO 36 36 36 PRO PRO B . n B 1 37 ARG 37 37 37 ARG ARG B . n B 1 38 GLU 38 38 38 GLU GLU B . n B 1 39 MET 39 39 39 MET MET B . n B 1 40 GLY 40 40 40 GLY GLY B . n B 1 41 GLY 41 41 41 GLY GLY B . n B 1 42 GLN 42 42 42 GLN ALA B . n B 1 43 GLY 43 43 43 GLY GLY B . n B 1 44 GLY 44 44 44 GLY GLY B . n B 1 45 ALA 45 45 45 ALA ALA B . n B 1 46 ALA 46 46 46 ALA ALA B . n B 1 47 THR 47 47 47 THR THR B . n B 1 48 ASN 48 48 48 ASN ASN B . n B 1 49 PRO 49 49 49 PRO PRO B . n B 1 50 GLU 50 50 50 GLU GLU B . n B 1 51 GLN 51 51 51 GLN GLN B . n B 1 52 LEU 52 52 52 LEU LEU B . n B 1 53 PHE 53 53 53 PHE PHE B . n B 1 54 ALA 54 54 54 ALA ALA B . n B 1 55 ALA 55 55 55 ALA ALA B . n B 1 56 GLY 56 56 56 GLY GLY B . n B 1 57 TYR 57 57 57 TYR TYR B . n B 1 58 SER 58 58 58 SER SER B . n B 1 59 ALA 59 59 59 ALA ALA B . n B 1 60 CYS 60 60 60 CYS CYS B . n B 1 61 PHE 61 61 61 PHE PHE B . n B 1 62 ILE 62 62 62 ILE ILE B . n B 1 63 GLY 63 63 63 GLY GLY B . n B 1 64 ALA 64 64 64 ALA ALA B . n B 1 65 MET 65 65 65 MET MET B . n B 1 66 LYS 66 66 66 LYS LYS B . n B 1 67 PHE 67 67 67 PHE PHE B . n B 1 68 VAL 68 68 68 VAL VAL B . n B 1 69 ALA 69 69 69 ALA ALA B . n B 1 70 GLY 70 70 70 GLY GLY B . n B 1 71 GLN 71 71 71 GLN GLN B . n B 1 72 ARG 72 72 72 ARG ARG B . n B 1 73 LYS 73 73 73 LYS LYS B . n B 1 74 GLN 74 74 74 GLN GLN B . n B 1 75 THR 75 75 75 THR THR B . n B 1 76 LEU 76 76 76 LEU LEU B . n B 1 77 PRO 77 77 77 PRO PRO B . n B 1 78 ALA 78 78 78 ALA ALA B . n B 1 79 ASP 79 79 79 ASP ASP B . n B 1 80 ALA 80 80 80 ALA ALA B . n B 1 81 SER 81 81 81 SER SER B . n B 1 82 ILE 82 82 82 ILE ILE B . n B 1 83 THR 83 83 83 THR THR B . n B 1 84 GLY 84 84 84 GLY GLY B . n B 1 85 LYS 85 85 85 LYS LYS B . n B 1 86 VAL 86 86 86 VAL VAL B . n B 1 87 GLY 87 87 87 GLY GLY B . n B 1 88 ILE 88 88 88 ILE ILE B . n B 1 89 GLY 89 89 89 GLY GLY B . n B 1 90 GLN 90 90 90 GLN GLN B . n B 1 91 ILE 91 91 91 ILE ILE B . n B 1 92 PRO 92 92 92 PRO PRO B . n B 1 93 GLY 93 93 93 GLY GLY B . n B 1 94 GLY 94 94 94 GLY GLY B . n B 1 95 PHE 95 95 95 PHE PHE B . n B 1 96 GLY 96 96 96 GLY GLY B . n B 1 97 LEU 97 97 97 LEU LEU B . n B 1 98 GLU 98 98 98 GLU GLU B . n B 1 99 VAL 99 99 99 VAL VAL B . n B 1 100 GLU 100 100 100 GLU GLU B . n B 1 101 LEU 101 101 101 LEU LEU B . n B 1 102 HIS 102 102 102 HIS HIS B . n B 1 103 ILE 103 103 103 ILE ILE B . n B 1 104 ASN 104 104 104 ASN ASN B . n B 1 105 LEU 105 105 105 LEU LEU B . n B 1 106 PRO 106 106 106 PRO PRO B . n B 1 107 GLY 107 107 107 GLY GLY B . n B 1 108 MET 108 108 108 MET MET B . n B 1 109 GLU 109 109 109 GLU GLU B . n B 1 110 ARG 110 110 110 ARG ARG B . n B 1 111 GLU 111 111 111 GLU GLU B . n B 1 112 ALA 112 112 112 ALA ALA B . n B 1 113 ALA 113 113 113 ALA ALA B . n B 1 114 GLU 114 114 114 GLU GLU B . n B 1 115 ALA 115 115 115 ALA ALA B . n B 1 116 LEU 116 116 116 LEU LEU B . n B 1 117 VAL 117 117 117 VAL VAL B . n B 1 118 ALA 118 118 118 ALA ALA B . n B 1 119 ALA 119 119 119 ALA ALA B . n B 1 120 ALA 120 120 120 ALA ALA B . n B 1 121 HIS 121 121 121 HIS HIS B . n B 1 122 GLN 122 122 122 GLN GLN B . n B 1 123 VAL 123 123 123 VAL VAL B . n B 1 124 CYS 124 124 124 CYS CYS B . n B 1 125 PRO 125 125 125 PRO PRO B . n B 1 126 TYR 126 126 126 TYR TYR B . n B 1 127 SER 127 127 127 SER SER B . n B 1 128 ASN 128 128 128 ASN ASN B . n B 1 129 ALA 129 129 129 ALA ALA B . n B 1 130 THR 130 130 130 THR THR B . n B 1 131 ARG 131 131 131 ARG ARG B . n B 1 132 GLY 132 132 132 GLY GLY B . n B 1 133 ASN 133 133 133 ASN ASN B . n B 1 134 ILE 134 134 134 ILE ILE B . n B 1 135 ASP 135 135 135 ASP ASP B . n B 1 136 VAL 136 136 136 VAL VAL B . n B 1 137 ARG 137 137 137 ARG ARG B . n B 1 138 LEU 138 138 138 LEU LEU B . n B 1 139 ASN 139 139 139 ASN ASN B . n B 1 140 VAL 140 140 140 VAL VAL B . n B 1 141 SER 141 141 141 SER SER B . n B 1 142 VAL 142 142 142 VAL VAL B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DTT 1 171 1 DTT DTT A . D 2 DTT 1 172 2 DTT DTT B . E 3 HOH 1 172 2 HOH WAT A . E 3 HOH 2 173 4 HOH WAT A . E 3 HOH 3 174 5 HOH WAT A . E 3 HOH 4 175 8 HOH WAT A . E 3 HOH 5 176 9 HOH WAT A . E 3 HOH 6 177 11 HOH WAT A . E 3 HOH 7 178 13 HOH WAT A . E 3 HOH 8 179 14 HOH WAT A . E 3 HOH 9 180 15 HOH WAT A . E 3 HOH 10 181 18 HOH WAT A . E 3 HOH 11 182 19 HOH WAT A . E 3 HOH 12 183 21 HOH WAT A . E 3 HOH 13 184 23 HOH WAT A . E 3 HOH 14 185 25 HOH WAT A . E 3 HOH 15 186 27 HOH WAT A . E 3 HOH 16 187 31 HOH WAT A . E 3 HOH 17 188 33 HOH WAT A . E 3 HOH 18 189 34 HOH WAT A . E 3 HOH 19 190 35 HOH WAT A . E 3 HOH 20 191 36 HOH WAT A . E 3 HOH 21 192 39 HOH WAT A . E 3 HOH 22 193 42 HOH WAT A . E 3 HOH 23 194 43 HOH WAT A . E 3 HOH 24 195 45 HOH WAT A . E 3 HOH 25 196 46 HOH WAT A . E 3 HOH 26 197 48 HOH WAT A . E 3 HOH 27 198 49 HOH WAT A . E 3 HOH 28 199 50 HOH WAT A . E 3 HOH 29 200 59 HOH WAT A . E 3 HOH 30 201 60 HOH WAT A . E 3 HOH 31 202 61 HOH WAT A . E 3 HOH 32 203 64 HOH WAT A . E 3 HOH 33 204 65 HOH WAT A . E 3 HOH 34 205 66 HOH WAT A . E 3 HOH 35 206 67 HOH WAT A . E 3 HOH 36 207 69 HOH WAT A . E 3 HOH 37 208 71 HOH WAT A . E 3 HOH 38 209 72 HOH WAT A . E 3 HOH 39 210 75 HOH WAT A . E 3 HOH 40 211 78 HOH WAT A . E 3 HOH 41 212 79 HOH WAT A . E 3 HOH 42 213 80 HOH WAT A . E 3 HOH 43 214 83 HOH WAT A . E 3 HOH 44 215 86 HOH WAT A . E 3 HOH 45 216 88 HOH WAT A . E 3 HOH 46 217 93 HOH WAT A . E 3 HOH 47 218 94 HOH WAT A . E 3 HOH 48 219 95 HOH WAT A . E 3 HOH 49 220 96 HOH WAT A . E 3 HOH 50 221 98 HOH WAT A . E 3 HOH 51 222 100 HOH WAT A . E 3 HOH 52 223 101 HOH WAT A . E 3 HOH 53 224 103 HOH WAT A . E 3 HOH 54 225 104 HOH WAT A . E 3 HOH 55 226 106 HOH WAT A . E 3 HOH 56 227 107 HOH WAT A . E 3 HOH 57 228 111 HOH WAT A . E 3 HOH 58 229 112 HOH WAT A . E 3 HOH 59 230 114 HOH WAT A . E 3 HOH 60 231 115 HOH WAT A . E 3 HOH 61 232 118 HOH WAT A . E 3 HOH 62 233 120 HOH WAT A . E 3 HOH 63 234 122 HOH WAT A . E 3 HOH 64 235 123 HOH WAT A . E 3 HOH 65 236 124 HOH WAT A . E 3 HOH 66 237 126 HOH WAT A . E 3 HOH 67 238 128 HOH WAT A . E 3 HOH 68 239 130 HOH WAT A . E 3 HOH 69 240 132 HOH WAT A . E 3 HOH 70 241 133 HOH WAT A . E 3 HOH 71 242 137 HOH WAT A . E 3 HOH 72 243 138 HOH WAT A . E 3 HOH 73 244 140 HOH WAT A . E 3 HOH 74 245 142 HOH WAT A . E 3 HOH 75 246 144 HOH WAT A . E 3 HOH 76 247 148 HOH WAT A . E 3 HOH 77 248 151 HOH WAT A . E 3 HOH 78 249 152 HOH WAT A . E 3 HOH 79 250 153 HOH WAT A . E 3 HOH 80 251 157 HOH WAT A . E 3 HOH 81 252 159 HOH WAT A . E 3 HOH 82 253 160 HOH WAT A . E 3 HOH 83 254 161 HOH WAT A . E 3 HOH 84 255 163 HOH WAT A . E 3 HOH 85 256 165 HOH WAT A . E 3 HOH 86 257 170 HOH WAT A . F 3 HOH 1 173 1 HOH WAT B . F 3 HOH 2 174 3 HOH WAT B . F 3 HOH 3 175 6 HOH WAT B . F 3 HOH 4 176 7 HOH WAT B . F 3 HOH 5 177 10 HOH WAT B . F 3 HOH 6 178 12 HOH WAT B . F 3 HOH 7 179 16 HOH WAT B . F 3 HOH 8 180 17 HOH WAT B . F 3 HOH 9 181 20 HOH WAT B . F 3 HOH 10 182 22 HOH WAT B . F 3 HOH 11 183 24 HOH WAT B . F 3 HOH 12 184 26 HOH WAT B . F 3 HOH 13 185 28 HOH WAT B . F 3 HOH 14 186 29 HOH WAT B . F 3 HOH 15 187 30 HOH WAT B . F 3 HOH 16 188 32 HOH WAT B . F 3 HOH 17 189 37 HOH WAT B . F 3 HOH 18 190 38 HOH WAT B . F 3 HOH 19 191 40 HOH WAT B . F 3 HOH 20 192 41 HOH WAT B . F 3 HOH 21 193 44 HOH WAT B . F 3 HOH 22 194 47 HOH WAT B . F 3 HOH 23 195 51 HOH WAT B . F 3 HOH 24 196 52 HOH WAT B . F 3 HOH 25 197 53 HOH WAT B . F 3 HOH 26 198 54 HOH WAT B . F 3 HOH 27 199 55 HOH WAT B . F 3 HOH 28 200 56 HOH WAT B . F 3 HOH 29 201 57 HOH WAT B . F 3 HOH 30 202 58 HOH WAT B . F 3 HOH 31 203 62 HOH WAT B . F 3 HOH 32 204 63 HOH WAT B . F 3 HOH 33 205 68 HOH WAT B . F 3 HOH 34 206 70 HOH WAT B . F 3 HOH 35 207 73 HOH WAT B . F 3 HOH 36 208 74 HOH WAT B . F 3 HOH 37 209 76 HOH WAT B . F 3 HOH 38 210 77 HOH WAT B . F 3 HOH 39 211 81 HOH WAT B . F 3 HOH 40 212 82 HOH WAT B . F 3 HOH 41 213 84 HOH WAT B . F 3 HOH 42 214 85 HOH WAT B . F 3 HOH 43 215 87 HOH WAT B . F 3 HOH 44 216 89 HOH WAT B . F 3 HOH 45 217 90 HOH WAT B . F 3 HOH 46 218 91 HOH WAT B . F 3 HOH 47 219 92 HOH WAT B . F 3 HOH 48 220 97 HOH WAT B . F 3 HOH 49 221 99 HOH WAT B . F 3 HOH 50 222 102 HOH WAT B . F 3 HOH 51 223 105 HOH WAT B . F 3 HOH 52 224 108 HOH WAT B . F 3 HOH 53 225 109 HOH WAT B . F 3 HOH 54 226 110 HOH WAT B . F 3 HOH 55 227 113 HOH WAT B . F 3 HOH 56 228 116 HOH WAT B . F 3 HOH 57 229 117 HOH WAT B . F 3 HOH 58 230 119 HOH WAT B . F 3 HOH 59 231 121 HOH WAT B . F 3 HOH 60 232 125 HOH WAT B . F 3 HOH 61 233 127 HOH WAT B . F 3 HOH 62 234 129 HOH WAT B . F 3 HOH 63 235 131 HOH WAT B . F 3 HOH 64 236 134 HOH WAT B . F 3 HOH 65 237 135 HOH WAT B . F 3 HOH 66 238 136 HOH WAT B . F 3 HOH 67 239 139 HOH WAT B . F 3 HOH 68 240 141 HOH WAT B . F 3 HOH 69 241 143 HOH WAT B . F 3 HOH 70 242 145 HOH WAT B . F 3 HOH 71 243 146 HOH WAT B . F 3 HOH 72 244 147 HOH WAT B . F 3 HOH 73 245 149 HOH WAT B . F 3 HOH 74 246 150 HOH WAT B . F 3 HOH 75 247 154 HOH WAT B . F 3 HOH 76 248 155 HOH WAT B . F 3 HOH 77 249 156 HOH WAT B . F 3 HOH 78 250 158 HOH WAT B . F 3 HOH 79 251 162 HOH WAT B . F 3 HOH 80 252 164 HOH WAT B . F 3 HOH 81 253 166 HOH WAT B . F 3 HOH 82 254 167 HOH WAT B . F 3 HOH 83 255 168 HOH WAT B . F 3 HOH 84 256 169 HOH WAT B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7490 ? 1 MORE -59 ? 1 'SSA (A^2)' 11480 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-12-25 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Source and taxonomy' 3 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.0 ? 1 DENZO 'data reduction' . ? 2 CNS phasing . ? 3 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE Author states the ohr protein that was solved was engineered to have three methionines in place of leucines, which allowed the authors to use selenomethionine for phasing in the experiment. Furthermore, the author states the engineered mutations are not present in the wild type protein. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 45 ? ? 155.60 -9.24 2 1 ASP A 79 ? ? -95.30 30.13 3 1 LEU A 105 ? ? -119.14 73.97 4 1 ALA B 45 ? ? -166.46 13.79 5 1 LEU B 105 ? ? -118.52 74.99 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C2 ? A DTT 171 ? 'WRONG HAND' . 2 1 C3 ? A DTT 171 ? 'WRONG HAND' . 3 1 C2 ? B DTT 172 ? 'WRONG HAND' . 4 1 C3 ? B DTT 172 ? 'WRONG HAND' . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 42 ? CG ? A GLN 42 CG 2 1 Y 1 A GLN 42 ? CD ? A GLN 42 CD 3 1 Y 1 A GLN 42 ? OE1 ? A GLN 42 OE1 4 1 Y 1 A GLN 42 ? NE2 ? A GLN 42 NE2 5 1 Y 1 B GLN 42 ? CG ? B GLN 42 CG 6 1 Y 1 B GLN 42 ? CD ? B GLN 42 CD 7 1 Y 1 B GLN 42 ? OE1 ? B GLN 42 OE1 8 1 Y 1 B GLN 42 ? NE2 ? B GLN 42 NE2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2,3-DIHYDROXY-1,4-DITHIOBUTANE DTT 3 water HOH #