HEADER TRANSFERASE 24-OCT-02 1N2X TITLE CRYSTAL STRUCTURE ANALYSIS OF TM0872, A PUTATIVE SAM-DEPENDENT TITLE 2 METHYLTRANSFERASE, COMPLEXED WITH SAM COMPND MOL_ID: 1; COMPND 2 MOLECULE: S-ADENOSYL-METHYLTRANSFERASE MRAW; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TM0872; COMPND 5 EC: 2.1.1.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 GENE: TM0872; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21-DE3 KEYWDS SAM-DEPENDENT METHYLTRANSFERASE FOLD, PROTEIN-SAM METHYL DONOR KEYWDS 2 COMPLEX, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.J.MILLER,W.F.ANDERSON,MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 5 20-NOV-24 1N2X 1 REMARK SEQADV SHEET LINK REVDAT 4 24-FEB-09 1N2X 1 VERSN REVDAT 3 18-JAN-05 1N2X 1 AUTHOR KEYWDS REMARK REVDAT 2 23-DEC-03 1N2X 1 JRNL REVDAT 1 28-JAN-03 1N2X 0 JRNL AUTH D.J.MILLER,N.OUELLETTE,E.EVDOKIMOVA,A.SAVCHENKO,A.EDWARDS, JRNL AUTH 2 W.F.ANDERSON JRNL TITL CRYSTAL COMPLEXES OF A PREDICTED JRNL TITL 2 S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE REVEAL A JRNL TITL 3 TYPICAL ADOMET BINDING DOMAIN AND A SUBSTRATE RECOGNITION JRNL TITL 4 DOMAIN JRNL REF PROTEIN SCI. V. 12 1432 2003 JRNL REFN ISSN 0961-8368 JRNL PMID 12824489 JRNL DOI 10.1110/PS.0302403 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 63068 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 3187 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.97 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2450 REMARK 3 BIN FREE R VALUE : 0.2760 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 272 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.017 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4557 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 349 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.21 REMARK 3 ESD FROM SIGMAA (A) : 0.06 REMARK 3 LOW RESOLUTION CUTOFF (A) : 6.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.12 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.860 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.430 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.059 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.472 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.707 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA-MULTI-ENDO_REP2.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA2.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 1N2X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-OCT-02. REMARK 100 THE DEPOSITION ID IS D_1000017451. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-APR-02 REMARK 200 TEMPERATURE (KELVIN) : 170 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 5ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63100 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 25.70 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.38600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.650 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1M6Y REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: DROP- 50 MM NA CACODYLATE PH 6.5, 5 MM REMARK 280 HEPES PH 7.5, 0.1 M AMMONIUM SULFATE, 9 % PEG 8000, 0.25 M NACL, REMARK 280 1.0 MM BME, 10 MG/ML PROTEIN. WELL- 0.1M NA CACODYLATE PH 6.5, REMARK 280 0.1 M AMMONIUM SULFATE, 18 % PEG 8000, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 66.98000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.98000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 66.98000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.98000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 66.98000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 66.98000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 66.98000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 66.98000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 66.98000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 66.98000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 66.98000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 66.98000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 66.98000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 66.98000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 66.98000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 66.98000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 66.98000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 66.98000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAINS. THE BIOLOGICAL UNIT IS A REMARK 300 TRIMER ACCORDING TO DYNAMIC LIGHT SCATTERING DATA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 ARG A 2 REMARK 465 LYS A 3 REMARK 465 TYR A 4 REMARK 465 SER A 5 REMARK 465 GLN A 6 REMARK 465 ARG A 7 REMARK 465 GLU A 295 REMARK 465 GLU A 296 REMARK 465 GLY A 297 REMARK 465 GLY A 298 REMARK 465 ASP A 299 REMARK 465 GLY B -1 REMARK 465 HIS B 0 REMARK 465 MSE B 1 REMARK 465 ARG B 2 REMARK 465 LYS B 3 REMARK 465 TYR B 4 REMARK 465 SER B 5 REMARK 465 GLN B 6 REMARK 465 ARG B 7 REMARK 465 GLU B 274 REMARK 465 GLU B 275 REMARK 465 GLU B 276 REMARK 465 ILE B 277 REMARK 465 ARG B 278 REMARK 465 GLU B 279 REMARK 465 ASN B 280 REMARK 465 ARG B 293 REMARK 465 ILE B 294 REMARK 465 GLU B 295 REMARK 465 GLU B 296 REMARK 465 GLY B 297 REMARK 465 GLY B 298 REMARK 465 ASP B 299 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 14 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 15 CG CD OE1 OE2 REMARK 470 GLU B 23 CG CD OE1 OE2 REMARK 470 ASP B 24 CG OD1 OD2 REMARK 470 GLU B 25 CG CD OE1 OE2 REMARK 470 LYS B 26 CG CD CE NZ REMARK 470 LYS B 69 CG CD CE NZ REMARK 470 LYS B 90 CG CD CE NZ REMARK 470 GLU B 95 CG CD OE1 OE2 REMARK 470 ARG B 238 CG CD NE CZ NH1 NH2 REMARK 470 PRO B 272 CG CD REMARK 470 ARG B 282 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 284 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 287 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 292 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 24 -122.45 52.04 REMARK 500 ASP A 127 -70.05 -108.50 REMARK 500 ASN A 280 89.62 -177.89 REMARK 500 SER A 285 -4.54 88.66 REMARK 500 PHE B 19 -72.30 -112.24 REMARK 500 LYS B 21 70.83 60.15 REMARK 500 GLU B 23 -160.18 48.91 REMARK 500 GLU B 25 85.02 65.49 REMARK 500 GLU B 44 45.25 -84.31 REMARK 500 HIS B 45 -31.03 -157.99 REMARK 500 ASP B 73 2.09 -52.15 REMARK 500 TYR B 82 4.08 -62.80 REMARK 500 ASP B 127 -72.15 -106.79 REMARK 500 PRO B 235 103.26 -52.77 REMARK 500 THR B 266 115.14 -172.89 REMARK 500 PRO B 272 -150.47 -112.97 REMARK 500 ARG B 282 -70.45 -41.71 REMARK 500 ARG B 284 -79.46 -115.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAM A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAM B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1M6Y RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH SAH REMARK 900 RELATED ID: APC038 RELATED DB: TARGETDB DBREF 1N2X A 1 299 UNP Q9WZX6 MRAW_THEMA 1 299 DBREF 1N2X B 1 299 UNP Q9WZX6 MRAW_THEMA 1 299 SEQADV 1N2X GLY A -1 UNP Q9WZX6 CLONING ARTIFACT SEQADV 1N2X HIS A 0 UNP Q9WZX6 CLONING ARTIFACT SEQADV 1N2X MSE A 1 UNP Q9WZX6 MET 1 MODIFIED RESIDUE SEQADV 1N2X MSE A 12 UNP Q9WZX6 MET 12 MODIFIED RESIDUE SEQADV 1N2X MSE A 102 UNP Q9WZX6 MET 102 MODIFIED RESIDUE SEQADV 1N2X MSE A 128 UNP Q9WZX6 MET 128 MODIFIED RESIDUE SEQADV 1N2X MSE A 130 UNP Q9WZX6 MET 130 MODIFIED RESIDUE SEQADV 1N2X GLY B -1 UNP Q9WZX6 CLONING ARTIFACT SEQADV 1N2X HIS B 0 UNP Q9WZX6 CLONING ARTIFACT SEQADV 1N2X MSE B 1 UNP Q9WZX6 MET 1 MODIFIED RESIDUE SEQADV 1N2X MSE B 12 UNP Q9WZX6 MET 12 MODIFIED RESIDUE SEQADV 1N2X MSE B 102 UNP Q9WZX6 MET 102 MODIFIED RESIDUE SEQADV 1N2X MSE B 128 UNP Q9WZX6 MET 128 MODIFIED RESIDUE SEQADV 1N2X MSE B 130 UNP Q9WZX6 MET 130 MODIFIED RESIDUE SEQRES 1 A 301 GLY HIS MSE ARG LYS TYR SER GLN ARG HIS ILE PRO VAL SEQRES 2 A 301 MSE VAL ARG GLU VAL ILE GLU PHE LEU LYS PRO GLU ASP SEQRES 3 A 301 GLU LYS ILE ILE LEU ASP CYS THR VAL GLY GLU GLY GLY SEQRES 4 A 301 HIS SER ARG ALA ILE LEU GLU HIS CYS PRO GLY CYS ARG SEQRES 5 A 301 ILE ILE GLY ILE ASP VAL ASP SER GLU VAL LEU ARG ILE SEQRES 6 A 301 ALA GLU GLU LYS LEU LYS GLU PHE SER ASP ARG VAL SER SEQRES 7 A 301 LEU PHE LYS VAL SER TYR ARG GLU ALA ASP PHE LEU LEU SEQRES 8 A 301 LYS THR LEU GLY ILE GLU LYS VAL ASP GLY ILE LEU MSE SEQRES 9 A 301 ASP LEU GLY VAL SER THR TYR GLN LEU LYS GLY GLU ASN SEQRES 10 A 301 ARG GLY PHE THR PHE GLU ARG GLU GLU PRO LEU ASP MSE SEQRES 11 A 301 ARG MSE ASP LEU GLU SER GLU VAL THR ALA GLN LYS VAL SEQRES 12 A 301 LEU ASN GLU LEU PRO GLU GLU GLU LEU ALA ARG ILE ILE SEQRES 13 A 301 PHE GLU TYR GLY GLU GLU LYS ARG PHE ALA ARG ARG ILE SEQRES 14 A 301 ALA ARG LYS ILE VAL GLU ASN ARG PRO LEU ASN THR THR SEQRES 15 A 301 LEU ASP LEU VAL LYS ALA VAL ARG GLU ALA LEU PRO SER SEQRES 16 A 301 TYR GLU ILE ARG ARG ARG LYS ARG HIS PHE ALA THR LYS SEQRES 17 A 301 THR PHE GLN ALA ILE ARG ILE TYR VAL ASN ARG GLU LEU SEQRES 18 A 301 GLU ASN LEU LYS GLU PHE LEU LYS LYS ALA GLU ASP LEU SEQRES 19 A 301 LEU ASN PRO GLY GLY ARG ILE VAL VAL ILE SER PHE HIS SEQRES 20 A 301 SER LEU GLU ASP ARG ILE VAL LYS GLU THR PHE ARG ASN SEQRES 21 A 301 SER LYS LYS LEU ARG ILE LEU THR GLU LYS PRO VAL ARG SEQRES 22 A 301 PRO SER GLU GLU GLU ILE ARG GLU ASN PRO ARG ALA ARG SEQRES 23 A 301 SER GLY ARG LEU ARG ALA ALA GLU ARG ILE GLU GLU GLY SEQRES 24 A 301 GLY ASP SEQRES 1 B 301 GLY HIS MSE ARG LYS TYR SER GLN ARG HIS ILE PRO VAL SEQRES 2 B 301 MSE VAL ARG GLU VAL ILE GLU PHE LEU LYS PRO GLU ASP SEQRES 3 B 301 GLU LYS ILE ILE LEU ASP CYS THR VAL GLY GLU GLY GLY SEQRES 4 B 301 HIS SER ARG ALA ILE LEU GLU HIS CYS PRO GLY CYS ARG SEQRES 5 B 301 ILE ILE GLY ILE ASP VAL ASP SER GLU VAL LEU ARG ILE SEQRES 6 B 301 ALA GLU GLU LYS LEU LYS GLU PHE SER ASP ARG VAL SER SEQRES 7 B 301 LEU PHE LYS VAL SER TYR ARG GLU ALA ASP PHE LEU LEU SEQRES 8 B 301 LYS THR LEU GLY ILE GLU LYS VAL ASP GLY ILE LEU MSE SEQRES 9 B 301 ASP LEU GLY VAL SER THR TYR GLN LEU LYS GLY GLU ASN SEQRES 10 B 301 ARG GLY PHE THR PHE GLU ARG GLU GLU PRO LEU ASP MSE SEQRES 11 B 301 ARG MSE ASP LEU GLU SER GLU VAL THR ALA GLN LYS VAL SEQRES 12 B 301 LEU ASN GLU LEU PRO GLU GLU GLU LEU ALA ARG ILE ILE SEQRES 13 B 301 PHE GLU TYR GLY GLU GLU LYS ARG PHE ALA ARG ARG ILE SEQRES 14 B 301 ALA ARG LYS ILE VAL GLU ASN ARG PRO LEU ASN THR THR SEQRES 15 B 301 LEU ASP LEU VAL LYS ALA VAL ARG GLU ALA LEU PRO SER SEQRES 16 B 301 TYR GLU ILE ARG ARG ARG LYS ARG HIS PHE ALA THR LYS SEQRES 17 B 301 THR PHE GLN ALA ILE ARG ILE TYR VAL ASN ARG GLU LEU SEQRES 18 B 301 GLU ASN LEU LYS GLU PHE LEU LYS LYS ALA GLU ASP LEU SEQRES 19 B 301 LEU ASN PRO GLY GLY ARG ILE VAL VAL ILE SER PHE HIS SEQRES 20 B 301 SER LEU GLU ASP ARG ILE VAL LYS GLU THR PHE ARG ASN SEQRES 21 B 301 SER LYS LYS LEU ARG ILE LEU THR GLU LYS PRO VAL ARG SEQRES 22 B 301 PRO SER GLU GLU GLU ILE ARG GLU ASN PRO ARG ALA ARG SEQRES 23 B 301 SER GLY ARG LEU ARG ALA ALA GLU ARG ILE GLU GLU GLY SEQRES 24 B 301 GLY ASP MODRES 1N2X MSE A 12 MET SELENOMETHIONINE MODRES 1N2X MSE A 102 MET SELENOMETHIONINE MODRES 1N2X MSE A 128 MET SELENOMETHIONINE MODRES 1N2X MSE A 130 MET SELENOMETHIONINE MODRES 1N2X MSE B 12 MET SELENOMETHIONINE MODRES 1N2X MSE B 102 MET SELENOMETHIONINE MODRES 1N2X MSE B 128 MET SELENOMETHIONINE MODRES 1N2X MSE B 130 MET SELENOMETHIONINE HET MSE A 12 8 HET MSE A 102 8 HET MSE A 128 8 HET MSE A 130 8 HET MSE B 12 8 HET MSE B 102 8 HET MSE B 128 8 HET MSE B 130 8 HET SO4 A 500 5 HET SAM A 401 27 HET SO4 B 501 5 HET SAM B 402 27 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM SAM S-ADENOSYLMETHIONINE FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 SAM 2(C15 H22 N6 O5 S) FORMUL 7 HOH *349(H2 O) HELIX 1 1 MSE A 12 LYS A 21 1 10 HELIX 2 2 GLY A 36 CYS A 46 1 11 HELIX 3 3 ASP A 57 LEU A 68 1 12 HELIX 4 4 LYS A 69 SER A 72 5 4 HELIX 5 5 SER A 81 ARG A 83 5 3 HELIX 6 6 GLU A 84 LEU A 92 1 9 HELIX 7 7 SER A 107 GLY A 113 1 7 HELIX 8 8 THR A 137 LEU A 145 1 9 HELIX 9 9 PRO A 146 TYR A 157 1 12 HELIX 10 10 PHE A 163 ASN A 174 1 12 HELIX 11 11 THR A 179 LEU A 191 1 13 HELIX 12 12 PRO A 192 ARG A 199 1 8 HELIX 13 13 ALA A 204 ARG A 217 1 14 HELIX 14 14 ARG A 217 ALA A 229 1 13 HELIX 15 15 HIS A 245 SER A 259 1 15 HELIX 16 16 SER A 273 GLU A 279 1 7 HELIX 17 17 ASN A 280 ARG A 284 5 5 HELIX 18 18 MSE B 12 LYS B 21 1 10 HELIX 19 19 HIS B 38 LEU B 43 1 6 HELIX 20 20 ASP B 57 LYS B 67 1 11 HELIX 21 21 PHE B 71 ASP B 73 5 3 HELIX 22 22 GLU B 84 GLY B 93 1 10 HELIX 23 23 SER B 107 GLY B 113 1 7 HELIX 24 24 THR B 137 LEU B 145 1 9 HELIX 25 25 PRO B 146 GLY B 158 1 13 HELIX 26 26 PHE B 163 ASN B 174 1 12 HELIX 27 27 THR B 179 LEU B 191 1 13 HELIX 28 28 PRO B 192 ARG B 199 1 8 HELIX 29 29 ALA B 204 ASN B 216 1 13 HELIX 30 30 ARG B 217 ALA B 229 1 13 HELIX 31 31 HIS B 245 ASN B 258 1 14 SHEET 1 A 7 VAL A 75 LYS A 79 0 SHEET 2 A 7 ARG A 50 ASP A 55 1 N GLY A 53 O SER A 76 SHEET 3 A 7 ILE A 27 ASP A 30 1 N ILE A 28 O ARG A 50 SHEET 4 A 7 VAL A 97 ASP A 103 1 O GLY A 99 N LEU A 29 SHEET 5 A 7 LEU A 233 SER A 243 1 O VAL A 240 N ILE A 100 SHEET 6 A 7 ARG A 287 ARG A 293 -1 O ARG A 287 N SER A 243 SHEET 7 A 7 LEU A 262 ILE A 264 -1 N ARG A 263 O GLU A 292 SHEET 1 B 6 VAL B 75 PHE B 78 0 SHEET 2 B 6 ARG B 50 ILE B 54 1 N GLY B 53 O PHE B 78 SHEET 3 B 6 ILE B 27 ASP B 30 1 N ILE B 28 O ILE B 52 SHEET 4 B 6 VAL B 97 ASP B 103 1 O LEU B 101 N LEU B 29 SHEET 5 B 6 LEU B 233 SER B 243 1 O VAL B 240 N ILE B 100 SHEET 6 B 6 ARG B 263 ILE B 264 -1 SSBOND 1 CYS A 46 CYS A 49 1555 1555 2.06 SSBOND 2 CYS B 46 CYS B 49 1555 1555 2.03 LINK C VAL A 11 N MSE A 12 1555 1555 1.33 LINK C MSE A 12 N VAL A 13 1555 1555 1.33 LINK C LEU A 101 N MSE A 102 1555 1555 1.33 LINK C MSE A 102 N ASP A 103 1555 1555 1.32 LINK C ASP A 127 N MSE A 128 1555 1555 1.33 LINK C MSE A 128 N ARG A 129 1555 1555 1.32 LINK C ARG A 129 N MSE A 130 1555 1555 1.33 LINK C MSE A 130 N ASP A 131 1555 1555 1.33 LINK C VAL B 11 N MSE B 12 1555 1555 1.33 LINK C MSE B 12 N VAL B 13 1555 1555 1.33 LINK C LEU B 101 N MSE B 102 1555 1555 1.33 LINK C MSE B 102 N ASP B 103 1555 1555 1.33 LINK C ASP B 127 N MSE B 128 1555 1555 1.33 LINK C MSE B 128 N ARG B 129 1555 1555 1.33 LINK C ARG B 129 N MSE B 130 1555 1555 1.33 LINK C MSE B 130 N ASP B 131 1555 1555 1.33 CISPEP 1 ARG A 175 PRO A 176 0 -0.39 CISPEP 2 ARG B 175 PRO B 176 0 -0.11 SITE 1 AC1 3 ARG A 199 LYS A 200 ARG A 201 SITE 1 AC2 6 ARG B 199 LYS B 200 ARG B 201 HOH B 511 SITE 2 AC2 6 HOH B 552 HOH B 592 SITE 1 AC3 25 HIS A 8 CYS A 31 THR A 32 VAL A 33 SITE 2 AC3 25 GLY A 34 GLU A 35 GLY A 36 GLY A 37 SITE 3 AC3 25 HIS A 38 ASP A 55 VAL A 56 SER A 81 SITE 4 AC3 25 TYR A 82 ASP A 103 LEU A 104 GLY A 105 SITE 5 AC3 25 GLN A 110 MSE A 130 ASN A 221 ARG A 282 SITE 6 AC3 25 HOH A 520 HOH A 529 HOH A 567 HOH A 705 SITE 7 AC3 25 HOH A 708 SITE 1 AC4 20 HIS B 8 THR B 32 VAL B 33 GLY B 34 SITE 2 AC4 20 GLU B 35 GLY B 36 GLY B 37 HIS B 38 SITE 3 AC4 20 ASP B 55 VAL B 56 VAL B 60 VAL B 80 SITE 4 AC4 20 SER B 81 TYR B 82 ASP B 103 GLY B 105 SITE 5 AC4 20 VAL B 106 GLN B 110 MSE B 130 ASN B 221 CRYST1 133.960 133.960 133.960 90.00 90.00 90.00 P 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007465 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007465 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007465 0.00000 CONECT 28 33 CONECT 33 28 34 CONECT 34 33 35 37 CONECT 35 34 36 41 CONECT 36 35 CONECT 37 34 38 CONECT 38 37 39 CONECT 39 38 40 CONECT 40 39 CONECT 41 35 CONECT 315 332 CONECT 332 315 CONECT 778 784 CONECT 784 778 785 CONECT 785 784 786 788 CONECT 786 785 787 792 CONECT 787 786 CONECT 788 785 789 CONECT 789 788 790 CONECT 790 789 791 CONECT 791 790 CONECT 792 786 CONECT 990 996 CONECT 996 990 997 CONECT 997 996 998 1000 CONECT 998 997 999 1004 CONECT 999 998 CONECT 1000 997 1001 CONECT 1001 1000 1002 CONECT 1002 1001 1003 CONECT 1003 1002 CONECT 1004 998 CONECT 1006 1015 CONECT 1015 1006 1016 CONECT 1016 1015 1017 1019 CONECT 1017 1016 1018 1023 CONECT 1018 1017 CONECT 1019 1016 1020 CONECT 1020 1019 1021 CONECT 1021 1020 1022 CONECT 1022 1021 CONECT 1023 1017 CONECT 2421 2426 CONECT 2426 2421 2427 CONECT 2427 2426 2428 2430 CONECT 2428 2427 2429 2434 CONECT 2429 2428 CONECT 2430 2427 2431 CONECT 2431 2430 2432 CONECT 2432 2431 2433 CONECT 2433 2432 CONECT 2434 2428 CONECT 2675 2692 CONECT 2692 2675 CONECT 3095 3101 CONECT 3101 3095 3102 CONECT 3102 3101 3103 3105 CONECT 3103 3102 3104 3109 CONECT 3104 3103 CONECT 3105 3102 3106 CONECT 3106 3105 3107 CONECT 3107 3106 3108 CONECT 3108 3107 CONECT 3109 3103 CONECT 3307 3313 CONECT 3313 3307 3314 CONECT 3314 3313 3315 3317 CONECT 3315 3314 3316 3321 CONECT 3316 3315 CONECT 3317 3314 3318 CONECT 3318 3317 3319 CONECT 3319 3318 3320 CONECT 3320 3319 CONECT 3321 3315 CONECT 3323 3332 CONECT 3332 3323 3333 CONECT 3333 3332 3334 3336 CONECT 3334 3333 3335 3340 CONECT 3335 3334 CONECT 3336 3333 3337 CONECT 3337 3336 3338 CONECT 3338 3337 3339 CONECT 3339 3338 CONECT 3340 3334 CONECT 4599 4600 4601 4602 4603 CONECT 4600 4599 CONECT 4601 4599 CONECT 4602 4599 CONECT 4603 4599 CONECT 4604 4605 CONECT 4605 4604 4606 4609 CONECT 4606 4605 4607 4608 CONECT 4607 4606 CONECT 4608 4606 CONECT 4609 4605 4610 CONECT 4610 4609 4611 CONECT 4611 4610 4612 4613 CONECT 4612 4611 CONECT 4613 4611 4614 CONECT 4614 4613 4615 4616 CONECT 4615 4614 4620 CONECT 4616 4614 4617 4618 CONECT 4617 4616 CONECT 4618 4616 4619 4620 CONECT 4619 4618 CONECT 4620 4615 4618 4621 CONECT 4621 4620 4622 4630 CONECT 4622 4621 4623 CONECT 4623 4622 4624 CONECT 4624 4623 4625 4630 CONECT 4625 4624 4626 4627 CONECT 4626 4625 CONECT 4627 4625 4628 CONECT 4628 4627 4629 CONECT 4629 4628 4630 CONECT 4630 4621 4624 4629 CONECT 4631 4632 4633 4634 4635 CONECT 4632 4631 CONECT 4633 4631 CONECT 4634 4631 CONECT 4635 4631 CONECT 4636 4637 CONECT 4637 4636 4638 4641 CONECT 4638 4637 4639 4640 CONECT 4639 4638 CONECT 4640 4638 CONECT 4641 4637 4642 CONECT 4642 4641 4643 CONECT 4643 4642 4644 4645 CONECT 4644 4643 CONECT 4645 4643 4646 CONECT 4646 4645 4647 4648 CONECT 4647 4646 4652 CONECT 4648 4646 4649 4650 CONECT 4649 4648 CONECT 4650 4648 4651 4652 CONECT 4651 4650 CONECT 4652 4647 4650 4653 CONECT 4653 4652 4654 4662 CONECT 4654 4653 4655 CONECT 4655 4654 4656 CONECT 4656 4655 4657 4662 CONECT 4657 4656 4658 4659 CONECT 4658 4657 CONECT 4659 4657 4660 CONECT 4660 4659 4661 CONECT 4661 4660 4662 CONECT 4662 4653 4656 4661 MASTER 379 0 12 31 13 0 15 6 4970 2 148 48 END