data_1N3Y # _entry.id 1N3Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1N3Y pdb_00001n3y 10.2210/pdb1n3y/pdb RCSB RCSB017488 ? ? WWPDB D_1000017488 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-02-18 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-27 5 'Structure model' 1 4 2024-02-14 6 'Structure model' 1 5 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_ref_seq_dif 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1N3Y _pdbx_database_status.recvd_initial_deposition_date 2002-10-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vorup-Jensen, T.' 1 'Ostermeier, C.' 2 'Shimaoka, M.' 3 'Hommel, U.' 4 'Springer, T.A.' 5 # _citation.id primary _citation.title 'Structure and allosteric regulation of the alpha X beta 2 integrin I domain.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 100 _citation.page_first 1873 _citation.page_last 1878 _citation.year 2003 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12554829 _citation.pdbx_database_id_DOI 10.1073/pnas.0237387100 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vorup-Jensen, T.' 1 ? primary 'Ostermeier, C.' 2 ? primary 'Shimaoka, M.' 3 ? primary 'Hommel, U.' 4 ? primary 'Springer, T.A.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Integrin alpha-X' 22355.283 1 ? 'T192S, T234A' 'I domain' ? 2 water nat water 18.015 291 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Leukocyte adhesion glycoprotein p150,95 alpha chain; Leukocyte adhesion receptor p150,95; CD11c; Leu M5' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMASRQEQDIVFLIDGSGSISSRNFATMMNFVRAVISQFQRPSTQFSLMQFSNKFQTHFTFEEFRRSSNPLSLLASVH QLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKE LNDIASKPSQEHIFKVEDFDALKDIQNQLKEKIFAIEG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMASRQEQDIVFLIDGSGSISSRNFATMMNFVRAVISQFQRPSTQFSLMQFSNKFQTHFTFEEFRRSSNPLSLLASVH QLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKE LNDIASKPSQEHIFKVEDFDALKDIQNQLKEKIFAIEG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ALA n 1 6 SER n 1 7 ARG n 1 8 GLN n 1 9 GLU n 1 10 GLN n 1 11 ASP n 1 12 ILE n 1 13 VAL n 1 14 PHE n 1 15 LEU n 1 16 ILE n 1 17 ASP n 1 18 GLY n 1 19 SER n 1 20 GLY n 1 21 SER n 1 22 ILE n 1 23 SER n 1 24 SER n 1 25 ARG n 1 26 ASN n 1 27 PHE n 1 28 ALA n 1 29 THR n 1 30 MET n 1 31 MET n 1 32 ASN n 1 33 PHE n 1 34 VAL n 1 35 ARG n 1 36 ALA n 1 37 VAL n 1 38 ILE n 1 39 SER n 1 40 GLN n 1 41 PHE n 1 42 GLN n 1 43 ARG n 1 44 PRO n 1 45 SER n 1 46 THR n 1 47 GLN n 1 48 PHE n 1 49 SER n 1 50 LEU n 1 51 MET n 1 52 GLN n 1 53 PHE n 1 54 SER n 1 55 ASN n 1 56 LYS n 1 57 PHE n 1 58 GLN n 1 59 THR n 1 60 HIS n 1 61 PHE n 1 62 THR n 1 63 PHE n 1 64 GLU n 1 65 GLU n 1 66 PHE n 1 67 ARG n 1 68 ARG n 1 69 SER n 1 70 SER n 1 71 ASN n 1 72 PRO n 1 73 LEU n 1 74 SER n 1 75 LEU n 1 76 LEU n 1 77 ALA n 1 78 SER n 1 79 VAL n 1 80 HIS n 1 81 GLN n 1 82 LEU n 1 83 GLN n 1 84 GLY n 1 85 PHE n 1 86 THR n 1 87 TYR n 1 88 THR n 1 89 ALA n 1 90 THR n 1 91 ALA n 1 92 ILE n 1 93 GLN n 1 94 ASN n 1 95 VAL n 1 96 VAL n 1 97 HIS n 1 98 ARG n 1 99 LEU n 1 100 PHE n 1 101 HIS n 1 102 ALA n 1 103 SER n 1 104 TYR n 1 105 GLY n 1 106 ALA n 1 107 ARG n 1 108 ARG n 1 109 ASP n 1 110 ALA n 1 111 ALA n 1 112 LYS n 1 113 ILE n 1 114 LEU n 1 115 ILE n 1 116 VAL n 1 117 ILE n 1 118 THR n 1 119 ASP n 1 120 GLY n 1 121 LYS n 1 122 LYS n 1 123 GLU n 1 124 GLY n 1 125 ASP n 1 126 SER n 1 127 LEU n 1 128 ASP n 1 129 TYR n 1 130 LYS n 1 131 ASP n 1 132 VAL n 1 133 ILE n 1 134 PRO n 1 135 MET n 1 136 ALA n 1 137 ASP n 1 138 ALA n 1 139 ALA n 1 140 GLY n 1 141 ILE n 1 142 ILE n 1 143 ARG n 1 144 TYR n 1 145 ALA n 1 146 ILE n 1 147 GLY n 1 148 VAL n 1 149 GLY n 1 150 LEU n 1 151 ALA n 1 152 PHE n 1 153 GLN n 1 154 ASN n 1 155 ARG n 1 156 ASN n 1 157 SER n 1 158 TRP n 1 159 LYS n 1 160 GLU n 1 161 LEU n 1 162 ASN n 1 163 ASP n 1 164 ILE n 1 165 ALA n 1 166 SER n 1 167 LYS n 1 168 PRO n 1 169 SER n 1 170 GLN n 1 171 GLU n 1 172 HIS n 1 173 ILE n 1 174 PHE n 1 175 LYS n 1 176 VAL n 1 177 GLU n 1 178 ASP n 1 179 PHE n 1 180 ASP n 1 181 ALA n 1 182 LEU n 1 183 LYS n 1 184 ASP n 1 185 ILE n 1 186 GLN n 1 187 ASN n 1 188 GLN n 1 189 LEU n 1 190 LYS n 1 191 GLU n 1 192 LYS n 1 193 ILE n 1 194 PHE n 1 195 ALA n 1 196 ILE n 1 197 GLU n 1 198 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'ITGAX OR CD11C' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 122 ? ? ? A . n A 1 2 SER 2 123 ? ? ? A . n A 1 3 HIS 3 124 ? ? ? A . n A 1 4 MET 4 125 ? ? ? A . n A 1 5 ALA 5 126 ? ? ? A . n A 1 6 SER 6 127 ? ? ? A . n A 1 7 ARG 7 128 ? ? ? A . n A 1 8 GLN 8 129 129 GLN GLN A . n A 1 9 GLU 9 130 130 GLU GLU A . n A 1 10 GLN 10 131 131 GLN GLN A . n A 1 11 ASP 11 132 132 ASP ASP A . n A 1 12 ILE 12 133 133 ILE ILE A . n A 1 13 VAL 13 134 134 VAL VAL A . n A 1 14 PHE 14 135 135 PHE PHE A . n A 1 15 LEU 15 136 136 LEU LEU A . n A 1 16 ILE 16 137 137 ILE ILE A . n A 1 17 ASP 17 138 138 ASP ASP A . n A 1 18 GLY 18 139 139 GLY GLY A . n A 1 19 SER 19 140 140 SER SER A . n A 1 20 GLY 20 141 141 GLY GLY A . n A 1 21 SER 21 142 142 SER SER A . n A 1 22 ILE 22 143 143 ILE ILE A . n A 1 23 SER 23 144 144 SER SER A . n A 1 24 SER 24 145 145 SER SER A . n A 1 25 ARG 25 146 146 ARG ARG A . n A 1 26 ASN 26 147 147 ASN ASN A . n A 1 27 PHE 27 148 148 PHE PHE A . n A 1 28 ALA 28 149 149 ALA ALA A . n A 1 29 THR 29 150 150 THR THR A . n A 1 30 MET 30 151 151 MET MET A . n A 1 31 MET 31 152 152 MET MET A . n A 1 32 ASN 32 153 153 ASN ASN A . n A 1 33 PHE 33 154 154 PHE PHE A . n A 1 34 VAL 34 155 155 VAL VAL A . n A 1 35 ARG 35 156 156 ARG ARG A . n A 1 36 ALA 36 157 157 ALA ALA A . n A 1 37 VAL 37 158 158 VAL VAL A . n A 1 38 ILE 38 159 159 ILE ILE A . n A 1 39 SER 39 160 160 SER SER A . n A 1 40 GLN 40 161 161 GLN GLN A . n A 1 41 PHE 41 162 162 PHE PHE A . n A 1 42 GLN 42 163 163 GLN GLN A . n A 1 43 ARG 43 164 164 ARG ARG A . n A 1 44 PRO 44 165 165 PRO PRO A . n A 1 45 SER 45 166 166 SER SER A . n A 1 46 THR 46 167 167 THR THR A . n A 1 47 GLN 47 168 168 GLN GLN A . n A 1 48 PHE 48 169 169 PHE PHE A . n A 1 49 SER 49 170 170 SER SER A . n A 1 50 LEU 50 171 171 LEU LEU A . n A 1 51 MET 51 172 172 MET MET A . n A 1 52 GLN 52 173 173 GLN GLN A . n A 1 53 PHE 53 174 174 PHE PHE A . n A 1 54 SER 54 175 175 SER SER A . n A 1 55 ASN 55 176 176 ASN ASN A . n A 1 56 LYS 56 177 177 LYS LYS A . n A 1 57 PHE 57 178 178 PHE PHE A . n A 1 58 GLN 58 179 179 GLN GLN A . n A 1 59 THR 59 180 180 THR THR A . n A 1 60 HIS 60 181 181 HIS HIS A . n A 1 61 PHE 61 182 182 PHE PHE A . n A 1 62 THR 62 183 183 THR THR A . n A 1 63 PHE 63 184 184 PHE PHE A . n A 1 64 GLU 64 185 185 GLU GLU A . n A 1 65 GLU 65 186 186 GLU GLU A . n A 1 66 PHE 66 187 187 PHE PHE A . n A 1 67 ARG 67 188 188 ARG ARG A . n A 1 68 ARG 68 189 189 ARG ARG A . n A 1 69 SER 69 190 190 SER SER A . n A 1 70 SER 70 191 191 SER SER A . n A 1 71 ASN 71 192 192 ASN ASN A . n A 1 72 PRO 72 193 193 PRO PRO A . n A 1 73 LEU 73 194 194 LEU LEU A . n A 1 74 SER 74 195 195 SER SER A . n A 1 75 LEU 75 196 196 LEU LEU A . n A 1 76 LEU 76 197 197 LEU LEU A . n A 1 77 ALA 77 198 198 ALA ALA A . n A 1 78 SER 78 199 199 SER SER A . n A 1 79 VAL 79 200 200 VAL VAL A . n A 1 80 HIS 80 201 201 HIS HIS A . n A 1 81 GLN 81 202 202 GLN GLN A . n A 1 82 LEU 82 203 203 LEU LEU A . n A 1 83 GLN 83 204 204 GLN GLN A . n A 1 84 GLY 84 205 205 GLY GLY A . n A 1 85 PHE 85 206 206 PHE PHE A . n A 1 86 THR 86 207 207 THR THR A . n A 1 87 TYR 87 208 208 TYR TYR A . n A 1 88 THR 88 209 209 THR THR A . n A 1 89 ALA 89 210 210 ALA ALA A . n A 1 90 THR 90 211 211 THR THR A . n A 1 91 ALA 91 212 212 ALA ALA A . n A 1 92 ILE 92 213 213 ILE ILE A . n A 1 93 GLN 93 214 214 GLN GLN A . n A 1 94 ASN 94 215 215 ASN ASN A . n A 1 95 VAL 95 216 216 VAL VAL A . n A 1 96 VAL 96 217 217 VAL VAL A . n A 1 97 HIS 97 218 218 HIS HIS A . n A 1 98 ARG 98 219 219 ARG ARG A . n A 1 99 LEU 99 220 220 LEU LEU A . n A 1 100 PHE 100 221 221 PHE PHE A . n A 1 101 HIS 101 222 222 HIS HIS A . n A 1 102 ALA 102 223 223 ALA ALA A . n A 1 103 SER 103 224 224 SER SER A . n A 1 104 TYR 104 225 225 TYR TYR A . n A 1 105 GLY 105 226 226 GLY GLY A . n A 1 106 ALA 106 227 227 ALA ALA A . n A 1 107 ARG 107 228 228 ARG ARG A . n A 1 108 ARG 108 229 229 ARG ARG A . n A 1 109 ASP 109 230 230 ASP ASP A . n A 1 110 ALA 110 231 231 ALA ALA A . n A 1 111 ALA 111 232 232 ALA ALA A . n A 1 112 LYS 112 233 233 LYS LYS A . n A 1 113 ILE 113 234 234 ILE ILE A . n A 1 114 LEU 114 235 235 LEU LEU A . n A 1 115 ILE 115 236 236 ILE ILE A . n A 1 116 VAL 116 237 237 VAL VAL A . n A 1 117 ILE 117 238 238 ILE ILE A . n A 1 118 THR 118 239 239 THR THR A . n A 1 119 ASP 119 240 240 ASP ASP A . n A 1 120 GLY 120 241 241 GLY GLY A . n A 1 121 LYS 121 242 242 LYS LYS A . n A 1 122 LYS 122 243 243 LYS LYS A . n A 1 123 GLU 123 244 244 GLU GLU A . n A 1 124 GLY 124 245 245 GLY GLY A . n A 1 125 ASP 125 246 246 ASP ASP A . n A 1 126 SER 126 247 247 SER SER A . n A 1 127 LEU 127 248 248 LEU LEU A . n A 1 128 ASP 128 249 249 ASP ASP A . n A 1 129 TYR 129 250 250 TYR TYR A . n A 1 130 LYS 130 251 251 LYS LYS A . n A 1 131 ASP 131 252 252 ASP ASP A . n A 1 132 VAL 132 253 253 VAL VAL A . n A 1 133 ILE 133 254 254 ILE ILE A . n A 1 134 PRO 134 255 255 PRO PRO A . n A 1 135 MET 135 256 256 MET MET A . n A 1 136 ALA 136 257 257 ALA ALA A . n A 1 137 ASP 137 258 258 ASP ASP A . n A 1 138 ALA 138 259 259 ALA ALA A . n A 1 139 ALA 139 260 260 ALA ALA A . n A 1 140 GLY 140 261 261 GLY GLY A . n A 1 141 ILE 141 262 262 ILE ILE A . n A 1 142 ILE 142 263 263 ILE ILE A . n A 1 143 ARG 143 264 264 ARG ARG A . n A 1 144 TYR 144 265 265 TYR TYR A . n A 1 145 ALA 145 266 266 ALA ALA A . n A 1 146 ILE 146 267 267 ILE ILE A . n A 1 147 GLY 147 268 268 GLY GLY A . n A 1 148 VAL 148 269 269 VAL VAL A . n A 1 149 GLY 149 270 270 GLY GLY A . n A 1 150 LEU 150 271 271 LEU LEU A . n A 1 151 ALA 151 272 272 ALA ALA A . n A 1 152 PHE 152 273 273 PHE PHE A . n A 1 153 GLN 153 274 274 GLN GLN A . n A 1 154 ASN 154 275 275 ASN ASN A . n A 1 155 ARG 155 276 276 ARG ARG A . n A 1 156 ASN 156 277 277 ASN ASN A . n A 1 157 SER 157 278 278 SER SER A . n A 1 158 TRP 158 279 279 TRP TRP A . n A 1 159 LYS 159 280 280 LYS LYS A . n A 1 160 GLU 160 281 281 GLU GLU A . n A 1 161 LEU 161 282 282 LEU LEU A . n A 1 162 ASN 162 283 283 ASN ASN A . n A 1 163 ASP 163 284 284 ASP ASP A . n A 1 164 ILE 164 285 285 ILE ILE A . n A 1 165 ALA 165 286 286 ALA ALA A . n A 1 166 SER 166 287 287 SER SER A . n A 1 167 LYS 167 288 288 LYS LYS A . n A 1 168 PRO 168 289 289 PRO PRO A . n A 1 169 SER 169 290 290 SER SER A . n A 1 170 GLN 170 291 291 GLN GLN A . n A 1 171 GLU 171 292 292 GLU GLU A . n A 1 172 HIS 172 293 293 HIS HIS A . n A 1 173 ILE 173 294 294 ILE ILE A . n A 1 174 PHE 174 295 295 PHE PHE A . n A 1 175 LYS 175 296 296 LYS LYS A . n A 1 176 VAL 176 297 297 VAL VAL A . n A 1 177 GLU 177 298 298 GLU GLU A . n A 1 178 ASP 178 299 299 ASP ASP A . n A 1 179 PHE 179 300 300 PHE PHE A . n A 1 180 ASP 180 301 301 ASP ASP A . n A 1 181 ALA 181 302 302 ALA ALA A . n A 1 182 LEU 182 303 303 LEU LEU A . n A 1 183 LYS 183 304 304 LYS LYS A . n A 1 184 ASP 184 305 305 ASP ASP A . n A 1 185 ILE 185 306 306 ILE ILE A . n A 1 186 GLN 186 307 307 GLN GLN A . n A 1 187 ASN 187 308 308 ASN ASN A . n A 1 188 GLN 188 309 309 GLN GLN A . n A 1 189 LEU 189 310 310 LEU LEU A . n A 1 190 LYS 190 311 311 LYS LYS A . n A 1 191 GLU 191 312 312 GLU GLU A . n A 1 192 LYS 192 313 313 LYS LYS A . n A 1 193 ILE 193 314 314 ILE ILE A . n A 1 194 PHE 194 315 315 PHE PHE A . n A 1 195 ALA 195 316 316 ALA ALA A . n A 1 196 ILE 196 317 317 ILE ILE A . n A 1 197 GLU 197 318 ? ? ? A . n A 1 198 GLY 198 319 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 320 1 HOH HOH A . B 2 HOH 2 321 2 HOH HOH A . B 2 HOH 3 322 3 HOH HOH A . B 2 HOH 4 323 4 HOH HOH A . B 2 HOH 5 324 5 HOH HOH A . B 2 HOH 6 325 6 HOH HOH A . B 2 HOH 7 326 7 HOH HOH A . B 2 HOH 8 327 8 HOH HOH A . B 2 HOH 9 328 9 HOH HOH A . B 2 HOH 10 329 10 HOH HOH A . B 2 HOH 11 330 11 HOH HOH A . B 2 HOH 12 331 12 HOH HOH A . B 2 HOH 13 332 13 HOH HOH A . B 2 HOH 14 333 14 HOH HOH A . B 2 HOH 15 334 15 HOH HOH A . B 2 HOH 16 335 16 HOH HOH A . B 2 HOH 17 336 17 HOH HOH A . B 2 HOH 18 337 18 HOH HOH A . B 2 HOH 19 338 19 HOH HOH A . B 2 HOH 20 339 20 HOH HOH A . B 2 HOH 21 340 21 HOH HOH A . B 2 HOH 22 341 22 HOH HOH A . B 2 HOH 23 342 23 HOH HOH A . B 2 HOH 24 343 24 HOH HOH A . B 2 HOH 25 344 25 HOH HOH A . B 2 HOH 26 345 26 HOH HOH A . B 2 HOH 27 346 27 HOH HOH A . B 2 HOH 28 347 28 HOH HOH A . B 2 HOH 29 348 29 HOH HOH A . B 2 HOH 30 349 30 HOH HOH A . B 2 HOH 31 350 31 HOH HOH A . B 2 HOH 32 351 32 HOH HOH A . B 2 HOH 33 352 33 HOH HOH A . B 2 HOH 34 353 34 HOH HOH A . B 2 HOH 35 354 35 HOH HOH A . B 2 HOH 36 355 36 HOH HOH A . B 2 HOH 37 356 37 HOH HOH A . B 2 HOH 38 357 38 HOH HOH A . B 2 HOH 39 358 39 HOH HOH A . B 2 HOH 40 359 40 HOH HOH A . B 2 HOH 41 360 41 HOH HOH A . B 2 HOH 42 361 42 HOH HOH A . B 2 HOH 43 362 43 HOH HOH A . B 2 HOH 44 363 44 HOH HOH A . B 2 HOH 45 364 45 HOH HOH A . B 2 HOH 46 365 46 HOH HOH A . B 2 HOH 47 366 47 HOH HOH A . B 2 HOH 48 367 48 HOH HOH A . B 2 HOH 49 368 49 HOH HOH A . B 2 HOH 50 369 50 HOH HOH A . B 2 HOH 51 370 51 HOH HOH A . B 2 HOH 52 371 52 HOH HOH A . B 2 HOH 53 372 53 HOH HOH A . B 2 HOH 54 373 54 HOH HOH A . B 2 HOH 55 374 55 HOH HOH A . B 2 HOH 56 375 56 HOH HOH A . B 2 HOH 57 376 57 HOH HOH A . B 2 HOH 58 377 58 HOH HOH A . B 2 HOH 59 378 59 HOH HOH A . B 2 HOH 60 379 60 HOH HOH A . B 2 HOH 61 380 61 HOH HOH A . B 2 HOH 62 381 62 HOH HOH A . B 2 HOH 63 382 63 HOH HOH A . B 2 HOH 64 383 64 HOH HOH A . B 2 HOH 65 384 65 HOH HOH A . B 2 HOH 66 385 66 HOH HOH A . B 2 HOH 67 386 67 HOH HOH A . B 2 HOH 68 387 68 HOH HOH A . B 2 HOH 69 388 69 HOH HOH A . B 2 HOH 70 389 70 HOH HOH A . B 2 HOH 71 390 71 HOH HOH A . B 2 HOH 72 391 72 HOH HOH A . B 2 HOH 73 392 73 HOH HOH A . B 2 HOH 74 393 74 HOH HOH A . B 2 HOH 75 394 75 HOH HOH A . B 2 HOH 76 395 76 HOH HOH A . B 2 HOH 77 396 77 HOH HOH A . B 2 HOH 78 397 78 HOH HOH A . B 2 HOH 79 398 79 HOH HOH A . B 2 HOH 80 399 80 HOH HOH A . B 2 HOH 81 400 81 HOH HOH A . B 2 HOH 82 401 82 HOH HOH A . B 2 HOH 83 402 83 HOH HOH A . B 2 HOH 84 403 84 HOH HOH A . B 2 HOH 85 404 85 HOH HOH A . B 2 HOH 86 405 86 HOH HOH A . B 2 HOH 87 406 87 HOH HOH A . B 2 HOH 88 407 88 HOH HOH A . B 2 HOH 89 408 89 HOH HOH A . B 2 HOH 90 409 90 HOH HOH A . B 2 HOH 91 410 91 HOH HOH A . B 2 HOH 92 411 92 HOH HOH A . B 2 HOH 93 412 93 HOH HOH A . B 2 HOH 94 413 94 HOH HOH A . B 2 HOH 95 414 95 HOH HOH A . B 2 HOH 96 415 96 HOH HOH A . B 2 HOH 97 416 97 HOH HOH A . B 2 HOH 98 417 98 HOH HOH A . B 2 HOH 99 418 99 HOH HOH A . B 2 HOH 100 419 100 HOH HOH A . B 2 HOH 101 420 101 HOH HOH A . B 2 HOH 102 421 102 HOH HOH A . B 2 HOH 103 422 103 HOH HOH A . B 2 HOH 104 423 104 HOH HOH A . B 2 HOH 105 424 105 HOH HOH A . B 2 HOH 106 425 106 HOH HOH A . B 2 HOH 107 426 107 HOH HOH A . B 2 HOH 108 427 108 HOH HOH A . B 2 HOH 109 428 109 HOH HOH A . B 2 HOH 110 429 110 HOH HOH A . B 2 HOH 111 430 111 HOH HOH A . B 2 HOH 112 431 112 HOH HOH A . B 2 HOH 113 432 113 HOH HOH A . B 2 HOH 114 433 114 HOH HOH A . B 2 HOH 115 434 115 HOH HOH A . B 2 HOH 116 435 116 HOH HOH A . B 2 HOH 117 436 117 HOH HOH A . B 2 HOH 118 437 118 HOH HOH A . B 2 HOH 119 438 119 HOH HOH A . B 2 HOH 120 439 120 HOH HOH A . B 2 HOH 121 440 121 HOH HOH A . B 2 HOH 122 441 122 HOH HOH A . B 2 HOH 123 442 123 HOH HOH A . B 2 HOH 124 443 124 HOH HOH A . B 2 HOH 125 444 125 HOH HOH A . B 2 HOH 126 445 126 HOH HOH A . B 2 HOH 127 446 127 HOH HOH A . B 2 HOH 128 447 128 HOH HOH A . B 2 HOH 129 448 129 HOH HOH A . B 2 HOH 130 449 130 HOH HOH A . B 2 HOH 131 450 131 HOH HOH A . B 2 HOH 132 451 132 HOH HOH A . B 2 HOH 133 452 133 HOH HOH A . B 2 HOH 134 453 134 HOH HOH A . B 2 HOH 135 454 135 HOH HOH A . B 2 HOH 136 455 136 HOH HOH A . B 2 HOH 137 456 137 HOH HOH A . B 2 HOH 138 457 139 HOH HOH A . B 2 HOH 139 458 140 HOH HOH A . B 2 HOH 140 459 141 HOH HOH A . B 2 HOH 141 460 142 HOH HOH A . B 2 HOH 142 461 143 HOH HOH A . B 2 HOH 143 462 144 HOH HOH A . B 2 HOH 144 463 145 HOH HOH A . B 2 HOH 145 464 146 HOH HOH A . B 2 HOH 146 465 147 HOH HOH A . B 2 HOH 147 466 148 HOH HOH A . B 2 HOH 148 467 149 HOH HOH A . B 2 HOH 149 468 150 HOH HOH A . B 2 HOH 150 469 151 HOH HOH A . B 2 HOH 151 470 152 HOH HOH A . B 2 HOH 152 471 153 HOH HOH A . B 2 HOH 153 472 154 HOH HOH A . B 2 HOH 154 473 155 HOH HOH A . B 2 HOH 155 474 156 HOH HOH A . B 2 HOH 156 475 157 HOH HOH A . B 2 HOH 157 476 158 HOH HOH A . B 2 HOH 158 477 159 HOH HOH A . B 2 HOH 159 478 160 HOH HOH A . B 2 HOH 160 479 161 HOH HOH A . B 2 HOH 161 480 162 HOH HOH A . B 2 HOH 162 481 163 HOH HOH A . B 2 HOH 163 482 164 HOH HOH A . B 2 HOH 164 483 165 HOH HOH A . B 2 HOH 165 484 166 HOH HOH A . B 2 HOH 166 485 167 HOH HOH A . B 2 HOH 167 486 168 HOH HOH A . B 2 HOH 168 487 169 HOH HOH A . B 2 HOH 169 488 170 HOH HOH A . B 2 HOH 170 489 171 HOH HOH A . B 2 HOH 171 490 172 HOH HOH A . B 2 HOH 172 491 173 HOH HOH A . B 2 HOH 173 492 174 HOH HOH A . B 2 HOH 174 493 175 HOH HOH A . B 2 HOH 175 494 176 HOH HOH A . B 2 HOH 176 495 177 HOH HOH A . B 2 HOH 177 496 178 HOH HOH A . B 2 HOH 178 497 179 HOH HOH A . B 2 HOH 179 498 180 HOH HOH A . B 2 HOH 180 499 181 HOH HOH A . B 2 HOH 181 500 182 HOH HOH A . B 2 HOH 182 501 183 HOH HOH A . B 2 HOH 183 502 184 HOH HOH A . B 2 HOH 184 503 185 HOH HOH A . B 2 HOH 185 504 186 HOH HOH A . B 2 HOH 186 505 187 HOH HOH A . B 2 HOH 187 506 188 HOH HOH A . B 2 HOH 188 507 189 HOH HOH A . B 2 HOH 189 508 190 HOH HOH A . B 2 HOH 190 509 191 HOH HOH A . B 2 HOH 191 510 192 HOH HOH A . B 2 HOH 192 511 193 HOH HOH A . B 2 HOH 193 512 194 HOH HOH A . B 2 HOH 194 513 195 HOH HOH A . B 2 HOH 195 514 196 HOH HOH A . B 2 HOH 196 515 197 HOH HOH A . B 2 HOH 197 516 198 HOH HOH A . B 2 HOH 198 517 199 HOH HOH A . B 2 HOH 199 518 200 HOH HOH A . B 2 HOH 200 519 201 HOH HOH A . B 2 HOH 201 520 202 HOH HOH A . B 2 HOH 202 521 203 HOH HOH A . B 2 HOH 203 522 204 HOH HOH A . B 2 HOH 204 523 205 HOH HOH A . B 2 HOH 205 524 206 HOH HOH A . B 2 HOH 206 525 207 HOH HOH A . B 2 HOH 207 526 208 HOH HOH A . B 2 HOH 208 527 209 HOH HOH A . B 2 HOH 209 528 210 HOH HOH A . B 2 HOH 210 529 211 HOH HOH A . B 2 HOH 211 530 212 HOH HOH A . B 2 HOH 212 531 213 HOH HOH A . B 2 HOH 213 532 214 HOH HOH A . B 2 HOH 214 533 215 HOH HOH A . B 2 HOH 215 534 216 HOH HOH A . B 2 HOH 216 535 217 HOH HOH A . B 2 HOH 217 536 218 HOH HOH A . B 2 HOH 218 537 219 HOH HOH A . B 2 HOH 219 538 220 HOH HOH A . B 2 HOH 220 539 221 HOH HOH A . B 2 HOH 221 540 222 HOH HOH A . B 2 HOH 222 541 223 HOH HOH A . B 2 HOH 223 542 224 HOH HOH A . B 2 HOH 224 543 225 HOH HOH A . B 2 HOH 225 544 226 HOH HOH A . B 2 HOH 226 545 227 HOH HOH A . B 2 HOH 227 546 228 HOH HOH A . B 2 HOH 228 547 229 HOH HOH A . B 2 HOH 229 548 230 HOH HOH A . B 2 HOH 230 549 231 HOH HOH A . B 2 HOH 231 550 232 HOH HOH A . B 2 HOH 232 551 233 HOH HOH A . B 2 HOH 233 552 234 HOH HOH A . B 2 HOH 234 553 235 HOH HOH A . B 2 HOH 235 554 236 HOH HOH A . B 2 HOH 236 555 237 HOH HOH A . B 2 HOH 237 556 238 HOH HOH A . B 2 HOH 238 557 239 HOH HOH A . B 2 HOH 239 558 240 HOH HOH A . B 2 HOH 240 559 241 HOH HOH A . B 2 HOH 241 560 242 HOH HOH A . B 2 HOH 242 561 243 HOH HOH A . B 2 HOH 243 562 244 HOH HOH A . B 2 HOH 244 563 245 HOH HOH A . B 2 HOH 245 564 246 HOH HOH A . B 2 HOH 246 565 247 HOH HOH A . B 2 HOH 247 566 248 HOH HOH A . B 2 HOH 248 567 249 HOH HOH A . B 2 HOH 249 568 250 HOH HOH A . B 2 HOH 250 569 251 HOH HOH A . B 2 HOH 251 570 252 HOH HOH A . B 2 HOH 252 571 253 HOH HOH A . B 2 HOH 253 572 254 HOH HOH A . B 2 HOH 254 573 255 HOH HOH A . B 2 HOH 255 574 256 HOH HOH A . B 2 HOH 256 575 257 HOH HOH A . B 2 HOH 257 576 258 HOH HOH A . B 2 HOH 258 577 259 HOH HOH A . B 2 HOH 259 578 260 HOH HOH A . B 2 HOH 260 579 261 HOH HOH A . B 2 HOH 261 580 262 HOH HOH A . B 2 HOH 262 581 263 HOH HOH A . B 2 HOH 263 582 264 HOH HOH A . B 2 HOH 264 583 265 HOH HOH A . B 2 HOH 265 584 266 HOH HOH A . B 2 HOH 266 585 267 HOH HOH A . B 2 HOH 267 586 268 HOH HOH A . B 2 HOH 268 587 269 HOH HOH A . B 2 HOH 269 588 270 HOH HOH A . B 2 HOH 270 589 271 HOH HOH A . B 2 HOH 271 590 272 HOH HOH A . B 2 HOH 272 591 273 HOH HOH A . B 2 HOH 273 592 274 HOH HOH A . B 2 HOH 274 593 275 HOH HOH A . B 2 HOH 275 594 276 HOH HOH A . B 2 HOH 276 595 277 HOH HOH A . B 2 HOH 277 596 278 HOH HOH A . B 2 HOH 278 597 279 HOH HOH A . B 2 HOH 279 598 280 HOH HOH A . B 2 HOH 280 599 281 HOH HOH A . B 2 HOH 281 600 282 HOH HOH A . B 2 HOH 282 601 283 HOH HOH A . B 2 HOH 283 602 284 HOH HOH A . B 2 HOH 284 603 285 HOH HOH A . B 2 HOH 285 604 286 HOH HOH A . B 2 HOH 286 605 287 HOH HOH A . B 2 HOH 287 606 288 HOH HOH A . B 2 HOH 288 607 289 HOH HOH A . B 2 HOH 289 608 290 HOH HOH A . B 2 HOH 290 609 291 HOH HOH A . B 2 HOH 291 610 292 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 CNS refinement . ? 3 CNX refinement 2000.1 ? 4 CNS phasing . ? 5 # _cell.entry_id 1N3Y _cell.length_a 84.694 _cell.length_b 84.694 _cell.length_c 65.776 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1N3Y _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1N3Y _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.70 _exptl_crystal.density_percent_sol 54.03 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_details 'ammonium sulfate, glycerol, sodium acetate, EDTA, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2001-10-18 _diffrn_detector.details 'osmic mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54178 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type ENRAF-NONIUS _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54178 # _reflns.entry_id 1N3Y _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.65 _reflns.number_obs 32357 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.061 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.9 _reflns.B_iso_Wilson_estimate 20.7 _reflns.pdbx_redundancy 5.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.65 _reflns_shell.d_res_low 1.71 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.229 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3199 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1N3Y _refine.ls_number_reflns_obs 32311 _refine.ls_number_reflns_all 32357 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 27.72 _refine.ls_d_res_high 1.65 _refine.ls_percent_reflns_obs 99.8 _refine.ls_R_factor_obs 0.209 _refine.ls_R_factor_all 0.209 _refine.ls_R_factor_R_work 0.208 _refine.ls_R_factor_R_free 0.225 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1601 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 23.5 _refine.aniso_B[1][1] -2.05 _refine.aniso_B[2][2] -2.05 _refine.aniso_B[3][3] 4.10 _refine.aniso_B[1][2] -0.74 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.412969 _refine.solvent_model_param_bsol 61.5352 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'In-house structure of a Mac1 I domain' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1N3Y _refine_analyze.Luzzati_coordinate_error_obs 0.19 _refine_analyze.Luzzati_sigma_a_obs 0.11 _refine_analyze.Luzzati_d_res_low_obs 5.0 _refine_analyze.Luzzati_coordinate_error_free 0.21 _refine_analyze.Luzzati_sigma_a_free 0.11 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1513 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 291 _refine_hist.number_atoms_total 1804 _refine_hist.d_res_high 1.65 _refine_hist.d_res_low 27.72 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.2 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.72 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.24 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.98 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.23 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.45 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.65 _refine_ls_shell.d_res_low 1.75 _refine_ls_shell.number_reflns_R_work 5055 _refine_ls_shell.R_factor_R_work 0.269 _refine_ls_shell.percent_reflns_obs 99.9 _refine_ls_shell.R_factor_R_free 0.298 _refine_ls_shell.R_factor_R_free_error 0.018 _refine_ls_shell.percent_reflns_R_free 5.3 _refine_ls_shell.number_reflns_R_free 283 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM ? 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1N3Y _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1N3Y _struct.title 'Crystal structure of the alpha-X beta2 integrin I domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1N3Y _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text 'alpha/beta Rossmann fold, CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ITAX_HUMAN _struct_ref.pdbx_db_accession P20702 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RQEQDIVFLIDGSGSISSRNFATMMNFVRAVISQFQRPSTQFSLMQFSNKFQTHFTFEEFRRTSNPLSLLASVHQLQGFT YTATAIQNVVHRLFHASYGARRDATKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIAS KPSQEHIFKVEDFDALKDIQNQLKEKIFAIEG ; _struct_ref.pdbx_align_begin 147 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1N3Y _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 7 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 198 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P20702 _struct_ref_seq.db_align_beg 147 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 338 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 128 _struct_ref_seq.pdbx_auth_seq_align_end 319 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1N3Y GLY A 1 ? UNP P20702 ? ? 'cloning artifact' 122 1 1 1N3Y SER A 2 ? UNP P20702 ? ? 'cloning artifact' 123 2 1 1N3Y HIS A 3 ? UNP P20702 ? ? 'cloning artifact' 124 3 1 1N3Y MET A 4 ? UNP P20702 ? ? 'cloning artifact' 125 4 1 1N3Y ALA A 5 ? UNP P20702 ? ? 'cloning artifact' 126 5 1 1N3Y SER A 6 ? UNP P20702 ? ? 'cloning artifact' 127 6 1 1N3Y SER A 69 ? UNP P20702 THR 209 'engineered mutation' 190 7 1 1N3Y ALA A 111 ? UNP P20702 THR 251 'engineered mutation' 232 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 23 ? SER A 39 ? SER A 144 SER A 160 1 ? 17 HELX_P HELX_P2 2 THR A 62 ? SER A 69 ? THR A 183 SER A 190 1 ? 8 HELX_P HELX_P3 3 ASN A 71 ? ALA A 77 ? ASN A 192 ALA A 198 5 ? 7 HELX_P HELX_P4 4 TYR A 87 ? HIS A 97 ? TYR A 208 HIS A 218 1 ? 11 HELX_P HELX_P5 5 HIS A 101 ? GLY A 105 ? HIS A 222 GLY A 226 5 ? 5 HELX_P HELX_P6 6 ASP A 128 ? ALA A 139 ? ASP A 249 ALA A 260 1 ? 12 HELX_P HELX_P7 7 LEU A 150 ? ASN A 154 ? LEU A 271 ASN A 275 5 ? 5 HELX_P HELX_P8 8 SER A 157 ? ALA A 165 ? SER A 278 ALA A 286 1 ? 9 HELX_P HELX_P9 9 SER A 169 ? GLU A 171 ? SER A 290 GLU A 292 5 ? 3 HELX_P HELX_P10 10 ASP A 178 ? ASP A 184 ? ASP A 299 ASP A 305 5 ? 7 HELX_P HELX_P11 11 ILE A 185 ? ALA A 195 ? ILE A 306 ALA A 316 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ARG 43 A . ? ARG 164 A PRO 44 A ? PRO 165 A 1 -0.17 2 LYS 167 A . ? LYS 288 A PRO 168 A ? PRO 289 A 1 0.11 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 57 ? PHE A 61 ? PHE A 178 PHE A 182 A 2 THR A 46 ? PHE A 53 ? THR A 167 PHE A 174 A 3 GLN A 10 ? ASP A 17 ? GLN A 131 ASP A 138 A 4 ALA A 111 ? THR A 118 ? ALA A 232 THR A 239 A 5 ILE A 142 ? VAL A 148 ? ILE A 263 VAL A 269 A 6 ILE A 173 ? VAL A 176 ? ILE A 294 VAL A 297 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLN A 58 ? O GLN A 179 N GLN A 52 ? N GLN A 173 A 2 3 O GLN A 47 ? O GLN A 168 N ILE A 12 ? N ILE A 133 A 3 4 N LEU A 15 ? N LEU A 136 O ILE A 115 ? O ILE A 236 A 4 5 N LEU A 114 ? N LEU A 235 O ILE A 142 ? O ILE A 263 A 5 6 N GLY A 147 ? N GLY A 268 O PHE A 174 ? O PHE A 295 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 175 ? ? -150.92 -114.51 2 1 ASN A 192 ? ? -151.86 75.68 3 1 SER A 199 ? ? -108.49 49.00 4 1 GLN A 204 ? ? 73.05 174.32 5 1 ARG A 219 ? ? -144.80 -57.62 6 1 ASN A 275 ? ? -87.16 -145.74 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 122 ? A GLY 1 2 1 Y 1 A SER 123 ? A SER 2 3 1 Y 1 A HIS 124 ? A HIS 3 4 1 Y 1 A MET 125 ? A MET 4 5 1 Y 1 A ALA 126 ? A ALA 5 6 1 Y 1 A SER 127 ? A SER 6 7 1 Y 1 A ARG 128 ? A ARG 7 8 1 Y 1 A GLU 318 ? A GLU 197 9 1 Y 1 A GLY 319 ? A GLY 198 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TRP N N N N 307 TRP CA C N S 308 TRP C C N N 309 TRP O O N N 310 TRP CB C N N 311 TRP CG C Y N 312 TRP CD1 C Y N 313 TRP CD2 C Y N 314 TRP NE1 N Y N 315 TRP CE2 C Y N 316 TRP CE3 C Y N 317 TRP CZ2 C Y N 318 TRP CZ3 C Y N 319 TRP CH2 C Y N 320 TRP OXT O N N 321 TRP H H N N 322 TRP H2 H N N 323 TRP HA H N N 324 TRP HB2 H N N 325 TRP HB3 H N N 326 TRP HD1 H N N 327 TRP HE1 H N N 328 TRP HE3 H N N 329 TRP HZ2 H N N 330 TRP HZ3 H N N 331 TRP HH2 H N N 332 TRP HXT H N N 333 TYR N N N N 334 TYR CA C N S 335 TYR C C N N 336 TYR O O N N 337 TYR CB C N N 338 TYR CG C Y N 339 TYR CD1 C Y N 340 TYR CD2 C Y N 341 TYR CE1 C Y N 342 TYR CE2 C Y N 343 TYR CZ C Y N 344 TYR OH O N N 345 TYR OXT O N N 346 TYR H H N N 347 TYR H2 H N N 348 TYR HA H N N 349 TYR HB2 H N N 350 TYR HB3 H N N 351 TYR HD1 H N N 352 TYR HD2 H N N 353 TYR HE1 H N N 354 TYR HE2 H N N 355 TYR HH H N N 356 TYR HXT H N N 357 VAL N N N N 358 VAL CA C N S 359 VAL C C N N 360 VAL O O N N 361 VAL CB C N N 362 VAL CG1 C N N 363 VAL CG2 C N N 364 VAL OXT O N N 365 VAL H H N N 366 VAL H2 H N N 367 VAL HA H N N 368 VAL HB H N N 369 VAL HG11 H N N 370 VAL HG12 H N N 371 VAL HG13 H N N 372 VAL HG21 H N N 373 VAL HG22 H N N 374 VAL HG23 H N N 375 VAL HXT H N N 376 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TRP N CA sing N N 293 TRP N H sing N N 294 TRP N H2 sing N N 295 TRP CA C sing N N 296 TRP CA CB sing N N 297 TRP CA HA sing N N 298 TRP C O doub N N 299 TRP C OXT sing N N 300 TRP CB CG sing N N 301 TRP CB HB2 sing N N 302 TRP CB HB3 sing N N 303 TRP CG CD1 doub Y N 304 TRP CG CD2 sing Y N 305 TRP CD1 NE1 sing Y N 306 TRP CD1 HD1 sing N N 307 TRP CD2 CE2 doub Y N 308 TRP CD2 CE3 sing Y N 309 TRP NE1 CE2 sing Y N 310 TRP NE1 HE1 sing N N 311 TRP CE2 CZ2 sing Y N 312 TRP CE3 CZ3 doub Y N 313 TRP CE3 HE3 sing N N 314 TRP CZ2 CH2 doub Y N 315 TRP CZ2 HZ2 sing N N 316 TRP CZ3 CH2 sing Y N 317 TRP CZ3 HZ3 sing N N 318 TRP CH2 HH2 sing N N 319 TRP OXT HXT sing N N 320 TYR N CA sing N N 321 TYR N H sing N N 322 TYR N H2 sing N N 323 TYR CA C sing N N 324 TYR CA CB sing N N 325 TYR CA HA sing N N 326 TYR C O doub N N 327 TYR C OXT sing N N 328 TYR CB CG sing N N 329 TYR CB HB2 sing N N 330 TYR CB HB3 sing N N 331 TYR CG CD1 doub Y N 332 TYR CG CD2 sing Y N 333 TYR CD1 CE1 sing Y N 334 TYR CD1 HD1 sing N N 335 TYR CD2 CE2 doub Y N 336 TYR CD2 HD2 sing N N 337 TYR CE1 CZ doub Y N 338 TYR CE1 HE1 sing N N 339 TYR CE2 CZ sing Y N 340 TYR CE2 HE2 sing N N 341 TYR CZ OH sing N N 342 TYR OH HH sing N N 343 TYR OXT HXT sing N N 344 VAL N CA sing N N 345 VAL N H sing N N 346 VAL N H2 sing N N 347 VAL CA C sing N N 348 VAL CA CB sing N N 349 VAL CA HA sing N N 350 VAL C O doub N N 351 VAL C OXT sing N N 352 VAL CB CG1 sing N N 353 VAL CB CG2 sing N N 354 VAL CB HB sing N N 355 VAL CG1 HG11 sing N N 356 VAL CG1 HG12 sing N N 357 VAL CG1 HG13 sing N N 358 VAL CG2 HG21 sing N N 359 VAL CG2 HG22 sing N N 360 VAL CG2 HG23 sing N N 361 VAL OXT HXT sing N N 362 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type other _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.details 'In-house structure of a Mac1 I domain' # _atom_sites.entry_id 1N3Y _atom_sites.fract_transf_matrix[1][1] 0.011807 _atom_sites.fract_transf_matrix[1][2] 0.006817 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013634 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015203 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_