data_1NAV # _entry.id 1NAV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1NAV RCSB RCSB017724 WWPDB D_1000017724 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1NAX _pdbx_database_related.details 'Thyroid receptor beta1 in complex with a beta-selective ligand' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1NAV _pdbx_database_status.recvd_initial_deposition_date 2002-11-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ye, L.' 1 'Li, Y.L.' 2 'Mellstrom, K.' 3 'Mellin, C.' 4 'Bladh, L.G.' 5 'Koehler, K.' 6 'Garg, N.' 7 'Garcia Collazo, A.M.' 8 'Litten, C.' 9 'Husman, B.' 10 'Persson, K.' 11 'Ljunggren, J.' 12 'Grover, G.' 13 'Sleph, P.G.' 14 'George, R.' 15 'Malm, J.' 16 # _citation.id primary _citation.title 'Thyroid receptor ligands. 1. Agonist ligands selective for the thyroid receptor beta1.' _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 46 _citation.page_first 1580 _citation.page_last 1588 _citation.year 2003 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12699376 _citation.pdbx_database_id_DOI 10.1021/jm021080f # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Ye, L.' 1 primary 'Li, Y.L.' 2 primary 'Mellstrom, K.' 3 primary 'Mellin, C.' 4 primary 'Bladh, L.G.' 5 primary 'Koehler, K.' 6 primary 'Garg, N.' 7 primary 'Garcia Collazo, A.M.' 8 primary 'Litten, C.' 9 primary 'Husman, B.' 10 primary 'Persson, K.' 11 primary 'Ljunggren, J.' 12 primary 'Grover, G.' 13 primary 'Sleph, P.G.' 14 primary 'George, R.' 15 primary 'Malm, J.' 16 # _cell.entry_id 1NAV _cell.length_a 109.319 _cell.length_b 109.319 _cell.length_c 134.652 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1NAV _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'hormone receptor alpha 1, THRA1' 29989.646 1 ? ? 'Ligand binding domain (residues 148-408)' ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn '{3,5-DICHLORO-4-[4-HYDROXY-3-(PROPAN-2-YL)PHENOXY]PHENYL}ACETIC ACID' 355.213 1 ? ? ? ? 4 water nat water 18.015 28 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;HMEEMIRSLQQRPEPTPEEWDLIHIATEAHRSTNAQGSHWKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPA ITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFELGKS LSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNIPHFWPKLLMKVTDLRMIGACHASRF LHMKVECPTELFPPLFLEVFEDQ ; _entity_poly.pdbx_seq_one_letter_code_can ;HMEEMIRSLQQRPEPTPEEWDLIHIATEAHRSTNAQGSHWKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPA ITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFELGKS LSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNIPHFWPKLLMKVTDLRMIGACHASRF LHMKVECPTELFPPLFLEVFEDQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 MET n 1 3 GLU n 1 4 GLU n 1 5 MET n 1 6 ILE n 1 7 ARG n 1 8 SER n 1 9 LEU n 1 10 GLN n 1 11 GLN n 1 12 ARG n 1 13 PRO n 1 14 GLU n 1 15 PRO n 1 16 THR n 1 17 PRO n 1 18 GLU n 1 19 GLU n 1 20 TRP n 1 21 ASP n 1 22 LEU n 1 23 ILE n 1 24 HIS n 1 25 ILE n 1 26 ALA n 1 27 THR n 1 28 GLU n 1 29 ALA n 1 30 HIS n 1 31 ARG n 1 32 SER n 1 33 THR n 1 34 ASN n 1 35 ALA n 1 36 GLN n 1 37 GLY n 1 38 SER n 1 39 HIS n 1 40 TRP n 1 41 LYS n 1 42 GLN n 1 43 ARG n 1 44 ARG n 1 45 LYS n 1 46 PHE n 1 47 LEU n 1 48 PRO n 1 49 ASP n 1 50 ASP n 1 51 ILE n 1 52 GLY n 1 53 GLN n 1 54 SER n 1 55 PRO n 1 56 ILE n 1 57 VAL n 1 58 SER n 1 59 MET n 1 60 PRO n 1 61 ASP n 1 62 GLY n 1 63 ASP n 1 64 LYS n 1 65 VAL n 1 66 ASP n 1 67 LEU n 1 68 GLU n 1 69 ALA n 1 70 PHE n 1 71 SER n 1 72 GLU n 1 73 PHE n 1 74 THR n 1 75 LYS n 1 76 ILE n 1 77 ILE n 1 78 THR n 1 79 PRO n 1 80 ALA n 1 81 ILE n 1 82 THR n 1 83 ARG n 1 84 VAL n 1 85 VAL n 1 86 ASP n 1 87 PHE n 1 88 ALA n 1 89 LYS n 1 90 LYS n 1 91 LEU n 1 92 PRO n 1 93 MET n 1 94 PHE n 1 95 SER n 1 96 GLU n 1 97 LEU n 1 98 PRO n 1 99 CYS n 1 100 GLU n 1 101 ASP n 1 102 GLN n 1 103 ILE n 1 104 ILE n 1 105 LEU n 1 106 LEU n 1 107 LYS n 1 108 GLY n 1 109 CYS n 1 110 CYS n 1 111 MET n 1 112 GLU n 1 113 ILE n 1 114 MET n 1 115 SER n 1 116 LEU n 1 117 ARG n 1 118 ALA n 1 119 ALA n 1 120 VAL n 1 121 ARG n 1 122 TYR n 1 123 ASP n 1 124 PRO n 1 125 GLU n 1 126 SER n 1 127 ASP n 1 128 THR n 1 129 LEU n 1 130 THR n 1 131 LEU n 1 132 SER n 1 133 GLY n 1 134 GLU n 1 135 MET n 1 136 ALA n 1 137 VAL n 1 138 LYS n 1 139 ARG n 1 140 GLU n 1 141 GLN n 1 142 LEU n 1 143 LYS n 1 144 ASN n 1 145 GLY n 1 146 GLY n 1 147 LEU n 1 148 GLY n 1 149 VAL n 1 150 VAL n 1 151 SER n 1 152 ASP n 1 153 ALA n 1 154 ILE n 1 155 PHE n 1 156 GLU n 1 157 LEU n 1 158 GLY n 1 159 LYS n 1 160 SER n 1 161 LEU n 1 162 SER n 1 163 ALA n 1 164 PHE n 1 165 ASN n 1 166 LEU n 1 167 ASP n 1 168 ASP n 1 169 THR n 1 170 GLU n 1 171 VAL n 1 172 ALA n 1 173 LEU n 1 174 LEU n 1 175 GLN n 1 176 ALA n 1 177 VAL n 1 178 LEU n 1 179 LEU n 1 180 MET n 1 181 SER n 1 182 THR n 1 183 ASP n 1 184 ARG n 1 185 SER n 1 186 GLY n 1 187 LEU n 1 188 LEU n 1 189 CYS n 1 190 VAL n 1 191 ASP n 1 192 LYS n 1 193 ILE n 1 194 GLU n 1 195 LYS n 1 196 SER n 1 197 GLN n 1 198 GLU n 1 199 ALA n 1 200 TYR n 1 201 LEU n 1 202 LEU n 1 203 ALA n 1 204 PHE n 1 205 GLU n 1 206 HIS n 1 207 TYR n 1 208 VAL n 1 209 ASN n 1 210 HIS n 1 211 ARG n 1 212 LYS n 1 213 HIS n 1 214 ASN n 1 215 ILE n 1 216 PRO n 1 217 HIS n 1 218 PHE n 1 219 TRP n 1 220 PRO n 1 221 LYS n 1 222 LEU n 1 223 LEU n 1 224 MET n 1 225 LYS n 1 226 VAL n 1 227 THR n 1 228 ASP n 1 229 LEU n 1 230 ARG n 1 231 MET n 1 232 ILE n 1 233 GLY n 1 234 ALA n 1 235 CYS n 1 236 HIS n 1 237 ALA n 1 238 SER n 1 239 ARG n 1 240 PHE n 1 241 LEU n 1 242 HIS n 1 243 MET n 1 244 LYS n 1 245 VAL n 1 246 GLU n 1 247 CYS n 1 248 PRO n 1 249 THR n 1 250 GLU n 1 251 LEU n 1 252 PHE n 1 253 PRO n 1 254 PRO n 1 255 LEU n 1 256 PHE n 1 257 LEU n 1 258 GLU n 1 259 VAL n 1 260 PHE n 1 261 GLU n 1 262 ASP n 1 263 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code THA_HUMAN _struct_ref.pdbx_db_accession P10827 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EEMIRSLQQRPEPTPEEWDLIHIATEAHRSTNAQGSHWKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAIT RVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFELGKSLS AFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNIPHFWPKLLMKVTDLRMIGACHASRFLH MKVECPTELFPPLFLEVFEDQ ; _struct_ref.pdbx_align_begin 148 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1NAV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 263 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P10827 _struct_ref_seq.db_align_beg 148 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 408 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 148 _struct_ref_seq.pdbx_auth_seq_align_end 408 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1NAV HIS A 1 ? UNP P10827 ? ? 'CLONING ARTIFACT' 146 1 1 1NAV MET A 2 ? UNP P10827 ? ? 'CLONING ARTIFACT' 147 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 IH5 non-polymer . '{3,5-DICHLORO-4-[4-HYDROXY-3-(PROPAN-2-YL)PHENOXY]PHENYL}ACETIC ACID' '3,5-DICHLORO-4-[(4-HYDROXY-3-ISOPROPYLPHENOXY)PHENYL]ACETIC ACID' 'C17 H16 Cl2 O4' 355.213 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1NAV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.87 _exptl_crystal.density_percent_sol 68.22 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details 'ammonium sulphate, sodium citrate, lithium sulphate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 20K, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2001-11-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8013 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X13' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, Hamburg' _diffrn_source.pdbx_synchrotron_beamline X13 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.8013 # _reflns.entry_id 1NAV _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.5 _reflns.number_obs 17266 _reflns.number_all ? _reflns.percent_possible_obs 99.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.051 _reflns.pdbx_netI_over_sigmaI 38 _reflns.B_iso_Wilson_estimate 49.5 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.54 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.43 _reflns_shell.meanI_over_sigI_obs 3.9 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 832 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1NAV _refine.ls_number_reflns_obs 16882 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 19.75 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 99.4 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.246 _refine.ls_R_factor_R_free 0.279 _refine.ls_R_factor_R_free_error 0.010 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 849 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 59.1 _refine.aniso_B[1][1] -2.95 _refine.aniso_B[2][2] -2.95 _refine.aniso_B[3][3] 5.91 _refine.aniso_B[1][2] 3.62 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.333696 _refine.solvent_model_param_bsol 33.7962 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1NAV _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free 0.46 _refine_analyze.Luzzati_sigma_a_free 0.47 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1984 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 28 _refine_hist.number_atoms_total 2040 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 19.75 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 19.7 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.92 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.55 1.00 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.72 1.20 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.12 1.20 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.33 1.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.50 _refine_ls_shell.d_res_low 2.66 _refine_ls_shell.number_reflns_R_work 2633 _refine_ls_shell.R_factor_R_work 0.36 _refine_ls_shell.percent_reflns_obs 100.0 _refine_ls_shell.R_factor_R_free 0.366 _refine_ls_shell.R_factor_R_free_error 0.032 _refine_ls_shell.percent_reflns_R_free 4.7 _refine_ls_shell.number_reflns_R_free 130 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER.PARAM WATER.TOP 'X-RAY DIFFRACTION' 3 INH.PAR INH.PAR 'X-RAY DIFFRACTION' 4 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1NAV _struct.title 'Thyroid Receptor Alpha in complex with an agonist selective for Thyroid Receptor Beta1' _struct.pdbx_descriptor 'hormone receptor alpha 1, THRA1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1NAV _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text 'Nuclear receptor, Thyroid receptor, ligand, complex, MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MET A 2 ? GLN A 10 ? MET A 147 GLN A 155 1 ? 9 HELX_P HELX_P2 2 GLU A 18 ? SER A 32 ? GLU A 163 SER A 177 1 ? 15 HELX_P HELX_P3 3 ASP A 66 ? LYS A 90 ? ASP A 211 LYS A 235 1 ? 25 HELX_P HELX_P4 4 LEU A 91 ? GLU A 96 ? LEU A 236 GLU A 241 1 ? 6 HELX_P HELX_P5 5 PRO A 98 ? ARG A 121 ? PRO A 243 ARG A 266 1 ? 24 HELX_P HELX_P6 6 SER A 132 ? GLU A 134 ? SER A 277 GLU A 279 5 ? 3 HELX_P HELX_P7 7 LYS A 138 ? GLY A 145 ? LYS A 283 GLY A 290 1 ? 8 HELX_P HELX_P8 8 GLY A 148 ? SER A 162 ? GLY A 293 SER A 307 1 ? 15 HELX_P HELX_P9 9 ASP A 167 ? MET A 180 ? ASP A 312 MET A 325 1 ? 14 HELX_P HELX_P10 10 CYS A 189 ? LYS A 212 ? CYS A 334 LYS A 357 1 ? 24 HELX_P HELX_P11 11 HIS A 217 ? CYS A 247 ? HIS A 362 CYS A 392 1 ? 31 HELX_P HELX_P12 12 PRO A 248 ? PHE A 252 ? PRO A 393 PHE A 397 5 ? 5 HELX_P HELX_P13 13 PRO A 253 ? GLU A 261 ? PRO A 398 GLU A 406 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 129 ? LEU A 131 ? LEU A 274 LEU A 276 A 2 MET A 135 ? VAL A 137 ? MET A 280 VAL A 282 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id LEU _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 131 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id LEU _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 276 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id MET _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 135 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id MET _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 280 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE SO4 A 500' AC2 Software ? ? ? ? 17 'BINDING SITE FOR RESIDUE IH5 A 600' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ARG A 12 ? ARG A 157 . ? 1_555 ? 2 AC1 4 HIS A 217 ? HIS A 362 . ? 1_555 ? 3 AC1 4 HOH D . ? HOH A 701 . ? 1_555 ? 4 AC1 4 HOH D . ? HOH A 713 . ? 1_555 ? 5 AC2 17 PHE A 73 ? PHE A 218 . ? 1_555 ? 6 AC2 17 THR A 74 ? THR A 219 . ? 1_555 ? 7 AC2 17 ILE A 77 ? ILE A 222 . ? 1_555 ? 8 AC2 17 ALA A 80 ? ALA A 225 . ? 1_555 ? 9 AC2 17 ARG A 83 ? ARG A 228 . ? 1_555 ? 10 AC2 17 MET A 111 ? MET A 256 . ? 1_555 ? 11 AC2 17 MET A 114 ? MET A 259 . ? 1_555 ? 12 AC2 17 LEU A 131 ? LEU A 276 . ? 1_555 ? 13 AC2 17 SER A 132 ? SER A 277 . ? 1_555 ? 14 AC2 17 GLY A 145 ? GLY A 290 . ? 1_555 ? 15 AC2 17 LEU A 147 ? LEU A 292 . ? 1_555 ? 16 AC2 17 ILE A 154 ? ILE A 299 . ? 1_555 ? 17 AC2 17 HIS A 236 ? HIS A 381 . ? 1_555 ? 18 AC2 17 MET A 243 ? MET A 388 . ? 1_555 ? 19 AC2 17 PHE A 256 ? PHE A 401 . ? 1_555 ? 20 AC2 17 HOH D . ? HOH A 725 . ? 1_555 ? 21 AC2 17 HOH D . ? HOH A 728 . ? 1_555 ? # _database_PDB_matrix.entry_id 1NAV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1NAV _atom_sites.fract_transf_matrix[1][1] 0.009148 _atom_sites.fract_transf_matrix[1][2] 0.005281 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010563 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007427 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 146 146 HIS HIS A . n A 1 2 MET 2 147 147 MET MET A . n A 1 3 GLU 3 148 148 GLU GLU A . n A 1 4 GLU 4 149 149 GLU GLU A . n A 1 5 MET 5 150 150 MET MET A . n A 1 6 ILE 6 151 151 ILE ILE A . n A 1 7 ARG 7 152 152 ARG ARG A . n A 1 8 SER 8 153 153 SER SER A . n A 1 9 LEU 9 154 154 LEU LEU A . n A 1 10 GLN 10 155 155 GLN GLN A . n A 1 11 GLN 11 156 156 GLN GLN A . n A 1 12 ARG 12 157 157 ARG ARG A . n A 1 13 PRO 13 158 158 PRO PRO A . n A 1 14 GLU 14 159 159 GLU GLU A . n A 1 15 PRO 15 160 160 PRO PRO A . n A 1 16 THR 16 161 161 THR THR A . n A 1 17 PRO 17 162 162 PRO PRO A . n A 1 18 GLU 18 163 163 GLU GLU A . n A 1 19 GLU 19 164 164 GLU GLU A . n A 1 20 TRP 20 165 165 TRP TRP A . n A 1 21 ASP 21 166 166 ASP ASP A . n A 1 22 LEU 22 167 167 LEU LEU A . n A 1 23 ILE 23 168 168 ILE ILE A . n A 1 24 HIS 24 169 169 HIS HIS A . n A 1 25 ILE 25 170 170 ILE ILE A . n A 1 26 ALA 26 171 171 ALA ALA A . n A 1 27 THR 27 172 172 THR THR A . n A 1 28 GLU 28 173 173 GLU GLU A . n A 1 29 ALA 29 174 174 ALA ALA A . n A 1 30 HIS 30 175 175 HIS HIS A . n A 1 31 ARG 31 176 176 ARG ARG A . n A 1 32 SER 32 177 177 SER SER A . n A 1 33 THR 33 178 178 THR THR A . n A 1 34 ASN 34 179 179 ASN ASN A . n A 1 35 ALA 35 180 180 ALA ALA A . n A 1 36 GLN 36 181 ? ? ? A . n A 1 37 GLY 37 182 ? ? ? A . n A 1 38 SER 38 183 ? ? ? A . n A 1 39 HIS 39 184 ? ? ? A . n A 1 40 TRP 40 185 ? ? ? A . n A 1 41 LYS 41 186 186 LYS LYS A . n A 1 42 GLN 42 187 187 GLN GLN A . n A 1 43 ARG 43 188 188 ARG ALA A . n A 1 44 ARG 44 189 189 ARG ARG A . n A 1 45 LYS 45 190 190 LYS ALA A . n A 1 46 PHE 46 191 191 PHE PHE A . n A 1 47 LEU 47 192 192 LEU LEU A . n A 1 48 PRO 48 193 193 PRO PRO A . n A 1 49 ASP 49 194 194 ASP ASP A . n A 1 50 ASP 50 195 195 ASP ASP A . n A 1 51 ILE 51 196 196 ILE ILE A . n A 1 52 GLY 52 197 197 GLY GLY A . n A 1 53 GLN 53 198 198 GLN GLN A . n A 1 54 SER 54 199 199 SER SER A . n A 1 55 PRO 55 200 ? ? ? A . n A 1 56 ILE 56 201 ? ? ? A . n A 1 57 VAL 57 202 ? ? ? A . n A 1 58 SER 58 203 ? ? ? A . n A 1 59 MET 59 204 ? ? ? A . n A 1 60 PRO 60 205 205 PRO PRO A . n A 1 61 ASP 61 206 206 ASP ASP A . n A 1 62 GLY 62 207 207 GLY GLY A . n A 1 63 ASP 63 208 208 ASP ASP A . n A 1 64 LYS 64 209 209 LYS ALA A . n A 1 65 VAL 65 210 210 VAL VAL A . n A 1 66 ASP 66 211 211 ASP ASP A . n A 1 67 LEU 67 212 212 LEU LEU A . n A 1 68 GLU 68 213 213 GLU GLU A . n A 1 69 ALA 69 214 214 ALA ALA A . n A 1 70 PHE 70 215 215 PHE PHE A . n A 1 71 SER 71 216 216 SER SER A . n A 1 72 GLU 72 217 217 GLU GLU A . n A 1 73 PHE 73 218 218 PHE PHE A . n A 1 74 THR 74 219 219 THR THR A . n A 1 75 LYS 75 220 220 LYS LYS A . n A 1 76 ILE 76 221 221 ILE ILE A . n A 1 77 ILE 77 222 222 ILE ILE A . n A 1 78 THR 78 223 223 THR THR A . n A 1 79 PRO 79 224 224 PRO PRO A . n A 1 80 ALA 80 225 225 ALA ALA A . n A 1 81 ILE 81 226 226 ILE ILE A . n A 1 82 THR 82 227 227 THR THR A . n A 1 83 ARG 83 228 228 ARG ARG A . n A 1 84 VAL 84 229 229 VAL VAL A . n A 1 85 VAL 85 230 230 VAL VAL A . n A 1 86 ASP 86 231 231 ASP ASP A . n A 1 87 PHE 87 232 232 PHE PHE A . n A 1 88 ALA 88 233 233 ALA ALA A . n A 1 89 LYS 89 234 234 LYS LYS A . n A 1 90 LYS 90 235 235 LYS LYS A . n A 1 91 LEU 91 236 236 LEU LEU A . n A 1 92 PRO 92 237 237 PRO PRO A . n A 1 93 MET 93 238 238 MET MET A . n A 1 94 PHE 94 239 239 PHE PHE A . n A 1 95 SER 95 240 240 SER ALA A . n A 1 96 GLU 96 241 241 GLU GLU A . n A 1 97 LEU 97 242 242 LEU LEU A . n A 1 98 PRO 98 243 243 PRO PRO A . n A 1 99 CYS 99 244 244 CYS CYS A . n A 1 100 GLU 100 245 245 GLU GLU A . n A 1 101 ASP 101 246 246 ASP ASP A . n A 1 102 GLN 102 247 247 GLN GLN A . n A 1 103 ILE 103 248 248 ILE ILE A . n A 1 104 ILE 104 249 249 ILE ILE A . n A 1 105 LEU 105 250 250 LEU LEU A . n A 1 106 LEU 106 251 251 LEU LEU A . n A 1 107 LYS 107 252 252 LYS LYS A . n A 1 108 GLY 108 253 253 GLY GLY A . n A 1 109 CYS 109 254 254 CYS CYS A . n A 1 110 CYS 110 255 255 CYS CYS A . n A 1 111 MET 111 256 256 MET MET A . n A 1 112 GLU 112 257 257 GLU GLU A . n A 1 113 ILE 113 258 258 ILE ILE A . n A 1 114 MET 114 259 259 MET MET A . n A 1 115 SER 115 260 260 SER SER A . n A 1 116 LEU 116 261 261 LEU LEU A . n A 1 117 ARG 117 262 262 ARG ARG A . n A 1 118 ALA 118 263 263 ALA ALA A . n A 1 119 ALA 119 264 264 ALA ALA A . n A 1 120 VAL 120 265 265 VAL VAL A . n A 1 121 ARG 121 266 266 ARG ARG A . n A 1 122 TYR 122 267 267 TYR TYR A . n A 1 123 ASP 123 268 268 ASP ASP A . n A 1 124 PRO 124 269 269 PRO PRO A . n A 1 125 GLU 125 270 270 GLU GLU A . n A 1 126 SER 126 271 271 SER SER A . n A 1 127 ASP 127 272 272 ASP ASP A . n A 1 128 THR 128 273 273 THR THR A . n A 1 129 LEU 129 274 274 LEU LEU A . n A 1 130 THR 130 275 275 THR THR A . n A 1 131 LEU 131 276 276 LEU LEU A . n A 1 132 SER 132 277 277 SER SER A . n A 1 133 GLY 133 278 278 GLY GLY A . n A 1 134 GLU 134 279 279 GLU GLU A . n A 1 135 MET 135 280 280 MET MET A . n A 1 136 ALA 136 281 281 ALA ALA A . n A 1 137 VAL 137 282 282 VAL VAL A . n A 1 138 LYS 138 283 283 LYS LYS A . n A 1 139 ARG 139 284 284 ARG ARG A . n A 1 140 GLU 140 285 285 GLU GLU A . n A 1 141 GLN 141 286 286 GLN GLN A . n A 1 142 LEU 142 287 287 LEU LEU A . n A 1 143 LYS 143 288 288 LYS LYS A . n A 1 144 ASN 144 289 289 ASN ASN A . n A 1 145 GLY 145 290 290 GLY GLY A . n A 1 146 GLY 146 291 291 GLY GLY A . n A 1 147 LEU 147 292 292 LEU LEU A . n A 1 148 GLY 148 293 293 GLY GLY A . n A 1 149 VAL 149 294 294 VAL VAL A . n A 1 150 VAL 150 295 295 VAL VAL A . n A 1 151 SER 151 296 296 SER SER A . n A 1 152 ASP 152 297 297 ASP ASP A . n A 1 153 ALA 153 298 298 ALA ALA A . n A 1 154 ILE 154 299 299 ILE ILE A . n A 1 155 PHE 155 300 300 PHE PHE A . n A 1 156 GLU 156 301 301 GLU GLU A . n A 1 157 LEU 157 302 302 LEU LEU A . n A 1 158 GLY 158 303 303 GLY GLY A . n A 1 159 LYS 159 304 304 LYS LYS A . n A 1 160 SER 160 305 305 SER SER A . n A 1 161 LEU 161 306 306 LEU LEU A . n A 1 162 SER 162 307 307 SER SER A . n A 1 163 ALA 163 308 308 ALA ALA A . n A 1 164 PHE 164 309 309 PHE PHE A . n A 1 165 ASN 165 310 310 ASN ASN A . n A 1 166 LEU 166 311 311 LEU LEU A . n A 1 167 ASP 167 312 312 ASP ASP A . n A 1 168 ASP 168 313 313 ASP ASP A . n A 1 169 THR 169 314 314 THR THR A . n A 1 170 GLU 170 315 315 GLU GLU A . n A 1 171 VAL 171 316 316 VAL VAL A . n A 1 172 ALA 172 317 317 ALA ALA A . n A 1 173 LEU 173 318 318 LEU LEU A . n A 1 174 LEU 174 319 319 LEU LEU A . n A 1 175 GLN 175 320 320 GLN GLN A . n A 1 176 ALA 176 321 321 ALA ALA A . n A 1 177 VAL 177 322 322 VAL VAL A . n A 1 178 LEU 178 323 323 LEU LEU A . n A 1 179 LEU 179 324 324 LEU LEU A . n A 1 180 MET 180 325 325 MET MET A . n A 1 181 SER 181 326 326 SER SER A . n A 1 182 THR 182 327 327 THR THR A . n A 1 183 ASP 183 328 328 ASP ASP A . n A 1 184 ARG 184 329 329 ARG ARG A . n A 1 185 SER 185 330 330 SER SER A . n A 1 186 GLY 186 331 331 GLY GLY A . n A 1 187 LEU 187 332 332 LEU LEU A . n A 1 188 LEU 188 333 333 LEU LEU A . n A 1 189 CYS 189 334 334 CYS CYS A . n A 1 190 VAL 190 335 335 VAL VAL A . n A 1 191 ASP 191 336 336 ASP ASP A . n A 1 192 LYS 192 337 337 LYS LYS A . n A 1 193 ILE 193 338 338 ILE ILE A . n A 1 194 GLU 194 339 339 GLU GLU A . n A 1 195 LYS 195 340 340 LYS LYS A . n A 1 196 SER 196 341 341 SER SER A . n A 1 197 GLN 197 342 342 GLN GLN A . n A 1 198 GLU 198 343 343 GLU GLU A . n A 1 199 ALA 199 344 344 ALA ALA A . n A 1 200 TYR 200 345 345 TYR TYR A . n A 1 201 LEU 201 346 346 LEU LEU A . n A 1 202 LEU 202 347 347 LEU LEU A . n A 1 203 ALA 203 348 348 ALA ALA A . n A 1 204 PHE 204 349 349 PHE PHE A . n A 1 205 GLU 205 350 350 GLU GLU A . n A 1 206 HIS 206 351 351 HIS HIS A . n A 1 207 TYR 207 352 352 TYR TYR A . n A 1 208 VAL 208 353 353 VAL VAL A . n A 1 209 ASN 209 354 354 ASN ASN A . n A 1 210 HIS 210 355 355 HIS HIS A . n A 1 211 ARG 211 356 356 ARG ARG A . n A 1 212 LYS 212 357 357 LYS LYS A . n A 1 213 HIS 213 358 358 HIS HIS A . n A 1 214 ASN 214 359 359 ASN ASN A . n A 1 215 ILE 215 360 360 ILE ILE A . n A 1 216 PRO 216 361 361 PRO PRO A . n A 1 217 HIS 217 362 362 HIS HIS A . n A 1 218 PHE 218 363 363 PHE PHE A . n A 1 219 TRP 219 364 364 TRP TRP A . n A 1 220 PRO 220 365 365 PRO PRO A . n A 1 221 LYS 221 366 366 LYS LYS A . n A 1 222 LEU 222 367 367 LEU LEU A . n A 1 223 LEU 223 368 368 LEU LEU A . n A 1 224 MET 224 369 369 MET MET A . n A 1 225 LYS 225 370 370 LYS LYS A . n A 1 226 VAL 226 371 371 VAL VAL A . n A 1 227 THR 227 372 372 THR THR A . n A 1 228 ASP 228 373 373 ASP ASP A . n A 1 229 LEU 229 374 374 LEU LEU A . n A 1 230 ARG 230 375 375 ARG ARG A . n A 1 231 MET 231 376 376 MET MET A . n A 1 232 ILE 232 377 377 ILE ILE A . n A 1 233 GLY 233 378 378 GLY GLY A . n A 1 234 ALA 234 379 379 ALA ALA A . n A 1 235 CYS 235 380 380 CYS CYS A . n A 1 236 HIS 236 381 381 HIS HIS A . n A 1 237 ALA 237 382 382 ALA ALA A . n A 1 238 SER 238 383 383 SER SER A . n A 1 239 ARG 239 384 384 ARG ARG A . n A 1 240 PHE 240 385 385 PHE PHE A . n A 1 241 LEU 241 386 386 LEU LEU A . n A 1 242 HIS 242 387 387 HIS HIS A . n A 1 243 MET 243 388 388 MET MET A . n A 1 244 LYS 244 389 389 LYS LYS A . n A 1 245 VAL 245 390 390 VAL VAL A . n A 1 246 GLU 246 391 391 GLU GLU A . n A 1 247 CYS 247 392 392 CYS CYS A . n A 1 248 PRO 248 393 393 PRO PRO A . n A 1 249 THR 249 394 394 THR THR A . n A 1 250 GLU 250 395 395 GLU GLU A . n A 1 251 LEU 251 396 396 LEU LEU A . n A 1 252 PHE 252 397 397 PHE PHE A . n A 1 253 PRO 253 398 398 PRO PRO A . n A 1 254 PRO 254 399 399 PRO PRO A . n A 1 255 LEU 255 400 400 LEU LEU A . n A 1 256 PHE 256 401 401 PHE PHE A . n A 1 257 LEU 257 402 402 LEU LEU A . n A 1 258 GLU 258 403 403 GLU GLU A . n A 1 259 VAL 259 404 404 VAL VAL A . n A 1 260 PHE 260 405 405 PHE PHE A . n A 1 261 GLU 261 406 406 GLU GLU A . n A 1 262 ASP 262 407 407 ASP ASP A . n A 1 263 GLN 263 408 408 GLN GLN A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-06-17 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SCALEPACK 'data scaling' . ? 2 CNX refinement 2000.1 ? 3 HKL-2000 'data reduction' . ? 4 CNX phasing 2000.1 ? 5 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 GLU _pdbx_validate_rmsd_angle.auth_seq_id_1 163 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 GLU _pdbx_validate_rmsd_angle.auth_seq_id_2 163 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 C _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 GLU _pdbx_validate_rmsd_angle.auth_seq_id_3 163 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 91.46 _pdbx_validate_rmsd_angle.angle_target_value 111.00 _pdbx_validate_rmsd_angle.angle_deviation -19.54 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.70 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 157 ? ? -114.78 68.00 2 1 PRO A 162 ? ? -64.94 68.34 3 1 GLU A 163 ? ? -149.00 -50.80 4 1 ASN A 179 ? ? -144.51 29.93 5 1 GLN A 187 ? ? -55.07 -79.56 6 1 ARG A 188 ? ? -96.17 49.61 7 1 SER A 277 ? ? 52.13 19.73 8 1 GLU A 279 ? ? -134.46 -59.80 9 1 LEU A 333 ? ? -97.13 -69.13 10 1 LYS A 357 ? ? 45.89 73.08 11 1 ASN A 359 ? ? -79.75 32.40 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 187 ? CG ? A GLN 42 CG 2 1 Y 1 A GLN 187 ? CD ? A GLN 42 CD 3 1 Y 1 A GLN 187 ? OE1 ? A GLN 42 OE1 4 1 Y 1 A GLN 187 ? NE2 ? A GLN 42 NE2 5 1 Y 1 A ARG 188 ? CG ? A ARG 43 CG 6 1 Y 1 A ARG 188 ? CD ? A ARG 43 CD 7 1 Y 1 A ARG 188 ? NE ? A ARG 43 NE 8 1 Y 1 A ARG 188 ? CZ ? A ARG 43 CZ 9 1 Y 1 A ARG 188 ? NH1 ? A ARG 43 NH1 10 1 Y 1 A ARG 188 ? NH2 ? A ARG 43 NH2 11 1 Y 1 A LYS 190 ? CG ? A LYS 45 CG 12 1 Y 1 A LYS 190 ? CD ? A LYS 45 CD 13 1 Y 1 A LYS 190 ? CE ? A LYS 45 CE 14 1 Y 1 A LYS 190 ? NZ ? A LYS 45 NZ 15 1 Y 1 A GLN 198 ? CG ? A GLN 53 CG 16 1 Y 1 A GLN 198 ? CD ? A GLN 53 CD 17 1 Y 1 A GLN 198 ? OE1 ? A GLN 53 OE1 18 1 Y 1 A GLN 198 ? NE2 ? A GLN 53 NE2 19 1 Y 1 A SER 199 ? OG ? A SER 54 OG 20 1 Y 1 A LYS 209 ? CG ? A LYS 64 CG 21 1 Y 1 A LYS 209 ? CD ? A LYS 64 CD 22 1 Y 1 A LYS 209 ? CE ? A LYS 64 CE 23 1 Y 1 A LYS 209 ? NZ ? A LYS 64 NZ 24 1 Y 1 A SER 240 ? OG ? A SER 95 OG 25 1 Y 1 A GLU 270 ? CG ? A GLU 125 CG 26 1 Y 1 A GLU 270 ? CD ? A GLU 125 CD 27 1 Y 1 A GLU 270 ? OE1 ? A GLU 125 OE1 28 1 Y 1 A GLU 270 ? OE2 ? A GLU 125 OE2 29 1 Y 1 A LYS 340 ? CG ? A LYS 195 CG 30 1 Y 1 A LYS 340 ? CD ? A LYS 195 CD 31 1 Y 1 A LYS 340 ? CE ? A LYS 195 CE 32 1 Y 1 A LYS 340 ? NZ ? A LYS 195 NZ 33 1 Y 1 A ASN 359 ? CG ? A ASN 214 CG 34 1 Y 1 A ASN 359 ? OD1 ? A ASN 214 OD1 35 1 Y 1 A ASN 359 ? ND2 ? A ASN 214 ND2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 181 ? A GLN 36 2 1 Y 1 A GLY 182 ? A GLY 37 3 1 Y 1 A SER 183 ? A SER 38 4 1 Y 1 A HIS 184 ? A HIS 39 5 1 Y 1 A TRP 185 ? A TRP 40 6 1 Y 1 A PRO 200 ? A PRO 55 7 1 Y 1 A ILE 201 ? A ILE 56 8 1 Y 1 A VAL 202 ? A VAL 57 9 1 Y 1 A SER 203 ? A SER 58 10 1 Y 1 A MET 204 ? A MET 59 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 '{3,5-DICHLORO-4-[4-HYDROXY-3-(PROPAN-2-YL)PHENOXY]PHENYL}ACETIC ACID' IH5 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 500 500 SO4 SO4 A . C 3 IH5 1 600 600 IH5 INH A . D 4 HOH 1 701 701 HOH WAT A . D 4 HOH 2 702 702 HOH WAT A . D 4 HOH 3 703 703 HOH WAT A . D 4 HOH 4 704 704 HOH WAT A . D 4 HOH 5 705 705 HOH WAT A . D 4 HOH 6 706 706 HOH WAT A . D 4 HOH 7 707 707 HOH WAT A . D 4 HOH 8 708 708 HOH WAT A . D 4 HOH 9 709 709 HOH WAT A . D 4 HOH 10 710 710 HOH WAT A . D 4 HOH 11 711 711 HOH WAT A . D 4 HOH 12 712 712 HOH WAT A . D 4 HOH 13 713 713 HOH WAT A . D 4 HOH 14 714 714 HOH WAT A . D 4 HOH 15 715 715 HOH WAT A . D 4 HOH 16 716 716 HOH WAT A . D 4 HOH 17 717 717 HOH WAT A . D 4 HOH 18 718 718 HOH WAT A . D 4 HOH 19 719 719 HOH WAT A . D 4 HOH 20 720 720 HOH WAT A . D 4 HOH 21 721 721 HOH WAT A . D 4 HOH 22 722 722 HOH WAT A . D 4 HOH 23 723 723 HOH WAT A . D 4 HOH 24 724 724 HOH WAT A . D 4 HOH 25 725 725 HOH WAT A . D 4 HOH 26 726 726 HOH WAT A . D 4 HOH 27 727 727 HOH WAT A . D 4 HOH 28 728 728 HOH WAT A . #