HEADER TRANSFERASE 02-DEC-02 1NB2 TITLE CRYSTAL STRUCTURE OF NUCLEOSIDE DIPHOSPHATE KINASE FROM BACILLUS TITLE 2 HALODENITRIFICANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOSIDE DIPHOSPHATE KINASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.4.6 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIRGIBACILLUS HALODENITRIFICANS; SOURCE 3 ORGANISM_TAXID: 1482 KEYWDS NUCLEOSIDE DIPHOSPHATE KINASE, BACILLUS HALODENITRIFIANS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.-J.CHEN,M.-Y.LIU,W.-C.CHANG,T.CHANG,B.-C.WANG,J.LE GALL REVDAT 3 13-MAR-24 1NB2 1 REMARK REVDAT 2 24-FEB-09 1NB2 1 VERSN REVDAT 1 06-MAY-03 1NB2 0 JRNL AUTH C.-J.CHEN,M.-Y.LIU,T.CHANG,W.-C.CHANG,B.-C.WANG,J.LE GALL JRNL TITL CRYSTAL STRUCTURE OF A NUCLEOSIDE DIPHOSPHATE KINASE FROM JRNL TITL 2 BACILLUS HALODENITRIFICANS: COEXPRESSION OF ITS ACTIVITY JRNL TITL 3 WITH A MN-SUPEROXIDE DISMUTASE. JRNL REF J.STRUCT.BIOL. V. 142 247 2003 JRNL REFN ISSN 1047-8477 JRNL PMID 12713952 JRNL DOI 10.1016/S1047-8477(03)00014-5 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 87.0 REMARK 3 NUMBER OF REFLECTIONS : 21145 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2115 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1026 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 34 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.734 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1NB2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-DEC-02. REMARK 100 THE DEPOSITION ID IS D_1000017730. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL17B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.116 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21145 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.0 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05600 REMARK 200 FOR THE DATA SET : 16.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 64.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.26000 REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM FORMATE, MES, PH 6.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+1/4,X+3/4,-Z+3/4 REMARK 290 14555 -Y+1/4,-X+1/4,-Z+1/4 REMARK 290 15555 Y+3/4,-X+3/4,Z+1/4 REMARK 290 16555 -Y+3/4,X+1/4,Z+3/4 REMARK 290 17555 X+1/4,Z+3/4,-Y+3/4 REMARK 290 18555 -X+3/4,Z+1/4,Y+3/4 REMARK 290 19555 -X+1/4,-Z+1/4,-Y+1/4 REMARK 290 20555 X+3/4,-Z+3/4,Y+1/4 REMARK 290 21555 Z+1/4,Y+3/4,-X+3/4 REMARK 290 22555 Z+3/4,-Y+3/4,X+1/4 REMARK 290 23555 -Z+3/4,Y+1/4,X+3/4 REMARK 290 24555 -Z+1/4,-Y+1/4,-X+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 57.03500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.03500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.03500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 57.03500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 57.03500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 57.03500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 57.03500 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 57.03500 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 57.03500 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 57.03500 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 57.03500 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 57.03500 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 57.03500 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 57.03500 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 57.03500 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 57.03500 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 57.03500 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 57.03500 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 28.51750 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 85.55250 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 85.55250 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 28.51750 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 28.51750 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 28.51750 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 85.55250 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 85.55250 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 28.51750 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 85.55250 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 28.51750 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 85.55250 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 28.51750 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 85.55250 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 85.55250 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 85.55250 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 28.51750 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 85.55250 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 28.51750 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 28.51750 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 28.51750 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 85.55250 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 85.55250 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 28.51750 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 28.51750 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 85.55250 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 85.55250 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 85.55250 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 85.55250 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 28.51750 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 85.55250 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 28.51750 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 85.55250 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 28.51750 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 28.51750 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 28.51750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A HEXAMER GENERATED FROM THE REMARK 300 MONOMER IN THE ASYMMETRIC UNIT BY THE CRYSTALLOGRAPHIC OPERATIONS. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 -1.000000 0.000000 142.58750 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 142.58750 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 142.58750 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 142.58750 REMARK 350 BIOMT2 5 0.000000 0.000000 -1.000000 142.58750 REMARK 350 BIOMT3 5 0.000000 -1.000000 0.000000 142.58750 REMARK 350 BIOMT1 6 0.000000 0.000000 -1.000000 142.58750 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 142.58750 REMARK 350 BIOMT3 6 -1.000000 0.000000 0.000000 142.58750 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 2 CB CG CD CE NZ REMARK 470 ALA A 51 CB REMARK 470 THR A 141 CB OG1 CG2 REMARK 470 PRO A 142 CB CG CD REMARK 470 ALA A 143 CB REMARK 470 ALA A 144 CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 120 C ALA A 121 N 0.150 REMARK 500 PHE A 131 C PHE A 132 N 0.142 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER A 120 CA - C - N ANGL. DEV. = 16.1 DEGREES REMARK 500 SER A 120 O - C - N ANGL. DEV. = -16.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 17 18.32 55.84 REMARK 500 ALA A 36 133.56 -176.03 REMARK 500 LYS A 43 -70.92 60.25 REMARK 500 ALA A 46 -74.57 -69.04 REMARK 500 SER A 68 -96.47 -68.01 REMARK 500 PRO A 70 -172.35 -58.06 REMARK 500 ASP A 96 -1.56 -155.46 REMARK 500 ALA A 114 -79.11 25.64 REMARK 500 SER A 118 141.11 -32.97 REMARK 500 PHE A 132 -134.49 -92.14 REMARK 500 SER A 139 42.32 -103.30 REMARK 500 ALA A 144 3.50 165.81 REMARK 500 REMARK 500 REMARK: NULL DBREF 1NB2 A 1 150 UNP Q7SIA9 Q7SIA9_BACHA 1 150 SEQRES 1 A 150 THR LYS GLU ARG THR PHE LEU MET VAL LYS PRO ASP GLY SEQRES 2 A 150 VAL GLN ARG ASN LEU VAL GLY GLU VAL VAL LYS ARG PHE SEQRES 3 A 150 GLU SER LYS GLY LEU LYS LEU ALA GLY ALA LYS LEU MET SEQRES 4 A 150 VAL ILE SER LYS ASP GLY ALA ALA ALA HIS TYR ALA GLU SEQRES 5 A 150 LEU GLY GLY GLY PRO PHE PHE GLY GLY LEU VAL GLY GLY SEQRES 6 A 150 ALA THR SER GLY PRO VAL PHE ALA MET VAL TRP GLU GLY SEQRES 7 A 150 LEU ASN ALA ALA ALA THR ALA ARG GLN ILE LEU GLY ALA SEQRES 8 A 150 THR ASN PRO SER ASP ALA ALA PRO GLY THR ILE ARG GLY SEQRES 9 A 150 ASP PHE GLY VAL SER ALA GLY ARG ASN ALA ILE HIS GLY SEQRES 10 A 150 SER ASP SER ALA GLY SER ALA ALA LYS GLU ILE GLY ALA SEQRES 11 A 150 PHE PHE GLY GLY GLY GLU ALA ALA SER GLY THR PRO ALA SEQRES 12 A 150 ALA ALA ALA ASP ILE TYR GLY FORMUL 2 HOH *34(H2 O) HELIX 1 1 LYS A 10 ARG A 16 1 7 HELIX 2 2 LEU A 18 SER A 28 1 11 HELIX 3 3 LYS A 43 TYR A 50 1 8 HELIX 4 4 PHE A 58 THR A 67 1 10 HELIX 5 5 ASN A 80 GLY A 90 1 11 HELIX 6 6 THR A 101 PHE A 106 1 6 HELIX 7 7 SER A 120 PHE A 132 1 13 HELIX 8 8 ALA A 144 ILE A 148 5 5 SHEET 1 A 4 LYS A 32 LYS A 37 0 SHEET 2 A 4 ALA A 73 GLU A 77 -1 O GLU A 77 N LYS A 32 SHEET 3 A 4 THR A 5 VAL A 9 -1 N THR A 5 O TRP A 76 SHEET 4 A 4 ILE A 115 GLY A 117 -1 O HIS A 116 N MET A 8 CRYST1 114.070 114.070 114.070 90.00 90.00 90.00 P 43 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008767 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008767 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008767 0.00000