data_1NC8 # _entry.id 1NC8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1NC8 pdb_00001nc8 10.2210/pdb1nc8/pdb WWPDB D_1000175223 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1NC8 _pdbx_database_status.recvd_initial_deposition_date 1998-05-14 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kodera, Y.' 1 'Sato, K.' 2 'Tsukahara, T.' 3 'Komatsu, H.' 4 'Maeda, T.' 5 'Kohno, T.' 6 # _citation.id primary _citation.title ;High-resolution solution NMR structure of the minimal active domain of the human immunodeficiency virus type-2 nucleocapsid protein. ; _citation.journal_abbrev Biochemistry _citation.journal_volume 37 _citation.page_first 17704 _citation.page_last 17713 _citation.year 1998 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9922136 _citation.pdbx_database_id_DOI 10.1021/bi981818o # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kodera, Y.' 1 ? primary 'Sato, K.' 2 ? primary 'Tsukahara, T.' 3 ? primary 'Komatsu, H.' 4 ? primary 'Maeda, T.' 5 ? primary 'Kohno, T.' 6 ? # _cell.entry_id 1NC8 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NC8 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'NUCLEOCAPSID PROTEIN' 3389.924 1 ? ? 'RESIDUES 1-29' ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code AQQRKVIRCWNCGKEGHSARQCRAPRRQG _entity_poly.pdbx_seq_one_letter_code_can AQQRKVIRCWNCGKEGHSARQCRAPRRQG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 GLN n 1 3 GLN n 1 4 ARG n 1 5 LYS n 1 6 VAL n 1 7 ILE n 1 8 ARG n 1 9 CYS n 1 10 TRP n 1 11 ASN n 1 12 CYS n 1 13 GLY n 1 14 LYS n 1 15 GLU n 1 16 GLY n 1 17 HIS n 1 18 SER n 1 19 ALA n 1 20 ARG n 1 21 GLN n 1 22 CYS n 1 23 ARG n 1 24 ALA n 1 25 PRO n 1 26 ARG n 1 27 ARG n 1 28 GLN n 1 29 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Lentivirus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus 2' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11709 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POL_HV2G1 _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P18042 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MGARNSVLRGKKADELEKIRLRPSGKKKYRLKHIVWAANELDKFGLAESLLESKEGCQKILTVLDPLVPTGSENLKSLFN TVCVIWCLHAEEKVKDTEEAKKLVQRHLGAETGTAEKMPSTSRPTAPPSGRGRNFPVQQTGGGNYIHVPLSPRTLNAWVK LVEDKKFGAEVVPGFQALSEGCTPYDINQMLNCVGDHQAAMQIIREIINDEAADWDAQHPIPGPLPAGQLRDPRGSDIAG TTSTVEEQIQWMYRPQNPVPVGNIYRRWIQIGLQKCVRMYNPTNILDVKQGPKEPFQSYVDRFYKSLRAEQTDPAVKNWM TQTLLIQNANPDCKLVLKGLGMNPTLEEMLTACQGVGGPGQKARLMAEALKEALTPPPIPFAAAQQRKVIRCWNCGKEGH SARQCRAPRRQGCWKCGKTGHVMAKCPERQAGFLGMGPWGKKPRNFPVAQAPPGLIPTAPPADPAVDLLERYMQQGREQR EQRERPYKEVTEDLLHLEQGKAPHREATEDLLHLNSLFGKDQ ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1NC8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 29 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P18042 _struct_ref_seq.db_align_beg 384 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 412 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 29 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 NOESY 1 2 1 COSY 1 3 1 TOCSY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 288 _pdbx_nmr_exptl_sample_conditions.pressure ? _pdbx_nmr_exptl_sample_conditions.pH 5.8 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model DMX500 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 500 # _pdbx_nmr_refine.entry_id 1NC8 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1NC8 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.conformer_selection_criteria ? # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement X-PLOR 3.1 BRUNGER 1 'structure solution' X-PLOR 3.1 ? 2 # _exptl.entry_id 1NC8 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1NC8 _struct.title ;HIGH-RESOLUTION SOLUTION NMR STRUCTURE OF THE MINIMAL ACTIVE DOMAIN OF THE HUMAN IMMUNODEFICIENCY VIRUS TYPE-2 NUCLEOCAPSID PROTEIN, 15 STRUCTURES ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1NC8 _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text 'NUCLEOCAPSID PROTEIN, HIV-2, RNA RECOGNITION, ZINC FINGER, Viral protein' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A Y N 1 ? B N N 2 ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id ALA _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 19 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLN _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 21 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ALA _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 19 _struct_conf.end_auth_comp_id GLN _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 21 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 A CYS 22 SG ? ? A CYS 9 A CYS 22 1_555 ? ? ? ? ? ? ? 2.588 ? ? metalc1 metalc ? ? A CYS 9 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 9 A ZN 30 1_555 ? ? ? ? ? ? ? 2.300 ? ? metalc2 metalc ? ? A CYS 12 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 12 A ZN 30 1_555 ? ? ? ? ? ? ? 2.296 ? ? metalc3 metalc ? ? A HIS 17 CE1 ? ? ? 1_555 B ZN . ZN ? ? A HIS 17 A ZN 30 1_555 ? ? ? ? ? ? ? 1.722 ? ? metalc4 metalc ? ? A HIS 17 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 17 A ZN 30 1_555 ? ? ? ? ? ? ? 1.996 ? ? metalc5 metalc ? ? A CYS 22 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 22 A ZN 30 1_555 ? ? ? ? ? ? ? 2.302 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details ZNB Unknown ? ? ? ? 14 'CCHC ZINC FINGER.' AC1 Software A ZN 30 ? 5 'BINDING SITE FOR RESIDUE ZN A 30' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 ZNB 14 CYS A 9 ? CYS A 9 . ? 1_555 ? 2 ZNB 14 TRP A 10 ? TRP A 10 . ? 1_555 ? 3 ZNB 14 ASN A 11 ? ASN A 11 . ? 1_555 ? 4 ZNB 14 CYS A 12 ? CYS A 12 . ? 1_555 ? 5 ZNB 14 GLY A 13 ? GLY A 13 . ? 1_555 ? 6 ZNB 14 LYS A 14 ? LYS A 14 . ? 1_555 ? 7 ZNB 14 GLU A 15 ? GLU A 15 . ? 1_555 ? 8 ZNB 14 GLY A 16 ? GLY A 16 . ? 1_555 ? 9 ZNB 14 HIS A 17 ? HIS A 17 . ? 1_555 ? 10 ZNB 14 SER A 18 ? SER A 18 . ? 1_555 ? 11 ZNB 14 ALA A 19 ? ALA A 19 . ? 1_555 ? 12 ZNB 14 ARG A 20 ? ARG A 20 . ? 1_555 ? 13 ZNB 14 GLN A 21 ? GLN A 21 . ? 1_555 ? 14 ZNB 14 CYS A 22 ? CYS A 22 . ? 1_555 ? 15 AC1 5 CYS A 9 ? CYS A 9 . ? 1_555 ? 16 AC1 5 CYS A 12 ? CYS A 12 . ? 1_555 ? 17 AC1 5 LYS A 14 ? LYS A 14 . ? 1_555 ? 18 AC1 5 HIS A 17 ? HIS A 17 . ? 1_555 ? 19 AC1 5 CYS A 22 ? CYS A 22 . ? 1_555 ? # _database_PDB_matrix.entry_id 1NC8 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1NC8 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 ARG 4 4 4 ARG ARG A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 CYS 9 9 9 CYS CYS A . n A 1 10 TRP 10 10 10 TRP TRP A . n A 1 11 ASN 11 11 11 ASN ASN A . n A 1 12 CYS 12 12 12 CYS CYS A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 HIS 17 17 17 HIS HIS A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 PRO 25 25 25 PRO PRO A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 ARG 27 27 27 ARG ARG A . n A 1 28 GLN 28 28 28 GLN GLN A . n A 1 29 GLY 29 29 29 GLY GLY A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id ZN _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 30 _pdbx_nonpoly_scheme.auth_seq_num 30 _pdbx_nonpoly_scheme.pdb_mon_id ZN _pdbx_nonpoly_scheme.auth_mon_id ZN _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 9 ? A CYS 9 ? 1_555 ZN ? B ZN . ? A ZN 30 ? 1_555 SG ? A CYS 12 ? A CYS 12 ? 1_555 86.9 ? 2 SG ? A CYS 9 ? A CYS 9 ? 1_555 ZN ? B ZN . ? A ZN 30 ? 1_555 CE1 ? A HIS 17 ? A HIS 17 ? 1_555 96.3 ? 3 SG ? A CYS 12 ? A CYS 12 ? 1_555 ZN ? B ZN . ? A ZN 30 ? 1_555 CE1 ? A HIS 17 ? A HIS 17 ? 1_555 174.7 ? 4 SG ? A CYS 9 ? A CYS 9 ? 1_555 ZN ? B ZN . ? A ZN 30 ? 1_555 NE2 ? A HIS 17 ? A HIS 17 ? 1_555 69.3 ? 5 SG ? A CYS 12 ? A CYS 12 ? 1_555 ZN ? B ZN . ? A ZN 30 ? 1_555 NE2 ? A HIS 17 ? A HIS 17 ? 1_555 144.0 ? 6 CE1 ? A HIS 17 ? A HIS 17 ? 1_555 ZN ? B ZN . ? A ZN 30 ? 1_555 NE2 ? A HIS 17 ? A HIS 17 ? 1_555 41.3 ? 7 SG ? A CYS 9 ? A CYS 9 ? 1_555 ZN ? B ZN . ? A ZN 30 ? 1_555 SG ? A CYS 22 ? A CYS 22 ? 1_555 68.4 ? 8 SG ? A CYS 12 ? A CYS 12 ? 1_555 ZN ? B ZN . ? A ZN 30 ? 1_555 SG ? A CYS 22 ? A CYS 22 ? 1_555 91.2 ? 9 CE1 ? A HIS 17 ? A HIS 17 ? 1_555 ZN ? B ZN . ? A ZN 30 ? 1_555 SG ? A CYS 22 ? A CYS 22 ? 1_555 93.9 ? 10 NE2 ? A HIS 17 ? A HIS 17 ? 1_555 ZN ? B ZN . ? A ZN 30 ? 1_555 SG ? A CYS 22 ? A CYS 22 ? 1_555 55.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-05-25 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' 4 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 5 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 6 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 7 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 10 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 11 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 12 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 13 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 14 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 15 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 16 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 17 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 18 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' 3.1 ? 1 X-PLOR refinement 3.1 ? 2 X-PLOR phasing 3.1 ? 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HE1 A HIS 17 ? ? ZN A ZN 30 ? ? 1.20 2 1 NE2 A HIS 17 ? ? SG A CYS 22 ? ? 2.02 3 5 HB2 A LYS 14 ? ? ZN A ZN 30 ? ? 1.55 4 5 NE2 A HIS 17 ? ? SG A CYS 22 ? ? 2.05 5 6 HE1 A HIS 17 ? ? ZN A ZN 30 ? ? 1.20 6 6 NE2 A HIS 17 ? ? SG A CYS 22 ? ? 2.10 7 6 SG A CYS 9 ? ? NE2 A HIS 17 ? ? 2.18 8 7 HE1 A HIS 17 ? ? ZN A ZN 30 ? ? 1.54 9 8 HE1 A HIS 17 ? ? ZN A ZN 30 ? ? 1.54 10 8 NE2 A HIS 17 ? ? SG A CYS 22 ? ? 2.15 11 10 HE1 A HIS 17 ? ? ZN A ZN 30 ? ? 1.14 12 10 NE2 A HIS 17 ? ? SG A CYS 22 ? ? 2.16 13 11 HE1 A HIS 17 ? ? ZN A ZN 30 ? ? 1.07 14 11 NE2 A HIS 17 ? ? SG A CYS 22 ? ? 2.08 15 12 HE1 A HIS 17 ? ? ZN A ZN 30 ? ? 1.21 16 13 HE1 A HIS 17 ? ? ZN A ZN 30 ? ? 1.10 17 13 NE2 A HIS 17 ? ? SG A CYS 22 ? ? 2.08 18 14 NE2 A HIS 17 ? ? SG A CYS 22 ? ? 2.14 19 15 NE2 A HIS 17 ? ? SG A CYS 22 ? ? 2.04 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 3 ? ? 44.62 76.23 2 1 ASN A 11 ? ? -41.00 -76.93 3 1 ALA A 24 ? ? -74.86 -74.72 4 1 ARG A 27 ? ? -178.79 85.69 5 2 ARG A 4 ? ? 177.21 76.50 6 2 CYS A 9 ? ? -41.78 109.63 7 2 ASN A 11 ? ? -38.91 -79.29 8 2 ALA A 24 ? ? -81.00 -72.86 9 2 ARG A 27 ? ? 174.81 105.88 10 3 LYS A 5 ? ? -96.08 -96.77 11 3 VAL A 6 ? ? 49.02 176.86 12 3 CYS A 9 ? ? -41.05 98.88 13 3 ASN A 11 ? ? -39.79 -79.12 14 3 ALA A 24 ? ? -71.57 -77.20 15 3 ARG A 27 ? ? 166.61 100.02 16 4 GLN A 2 ? ? -71.91 -140.92 17 4 CYS A 9 ? ? -48.43 97.30 18 4 ALA A 24 ? ? -87.37 -76.50 19 4 ARG A 27 ? ? 169.46 95.45 20 4 GLN A 28 ? ? 59.91 15.89 21 5 GLN A 3 ? ? 65.32 72.21 22 5 ARG A 4 ? ? -163.43 85.88 23 5 CYS A 9 ? ? -43.00 108.32 24 5 ALA A 24 ? ? -72.96 -82.08 25 5 ARG A 27 ? ? 164.17 95.93 26 6 LYS A 5 ? ? 55.09 96.61 27 6 CYS A 9 ? ? -45.77 98.90 28 6 ALA A 24 ? ? -72.02 -77.91 29 6 ARG A 27 ? ? 171.14 103.80 30 7 GLN A 2 ? ? -113.57 61.57 31 7 LYS A 5 ? ? -142.19 -43.20 32 7 CYS A 9 ? ? -39.91 93.89 33 7 ALA A 24 ? ? -68.12 -80.05 34 7 ARG A 27 ? ? 172.21 113.55 35 8 GLN A 2 ? ? 176.39 151.67 36 8 LYS A 5 ? ? 168.23 143.09 37 8 VAL A 6 ? ? -43.07 155.42 38 8 CYS A 9 ? ? -43.22 101.55 39 8 ALA A 24 ? ? -82.16 -80.82 40 8 ARG A 27 ? ? 172.87 100.92 41 9 VAL A 6 ? ? 54.49 166.83 42 9 ALA A 24 ? ? -68.65 -93.91 43 9 ARG A 27 ? ? 175.62 103.14 44 10 CYS A 9 ? ? -34.50 97.96 45 10 ALA A 24 ? ? -65.37 -78.52 46 10 ARG A 27 ? ? 178.31 111.44 47 11 ARG A 4 ? ? 64.92 159.03 48 11 GLU A 15 ? ? -32.20 137.13 49 11 CYS A 22 ? ? -54.94 96.65 50 11 ALA A 24 ? ? -74.42 -76.63 51 12 GLN A 2 ? ? 65.53 -85.48 52 12 GLU A 15 ? ? -39.23 128.84 53 12 ALA A 24 ? ? -68.19 -83.22 54 12 ARG A 27 ? ? 170.86 97.19 55 13 GLN A 3 ? ? 67.39 -177.17 56 13 ARG A 4 ? ? 73.55 173.04 57 13 LYS A 5 ? ? -105.55 78.94 58 13 CYS A 9 ? ? -41.88 109.59 59 13 ASN A 11 ? ? -44.72 -70.18 60 13 GLU A 15 ? ? -36.44 138.36 61 13 ALA A 24 ? ? -83.54 -73.05 62 13 ARG A 27 ? ? -179.24 111.63 63 14 GLN A 2 ? ? -114.27 -158.81 64 14 GLN A 3 ? ? 60.42 149.83 65 14 VAL A 6 ? ? 57.75 118.83 66 14 CYS A 9 ? ? -43.27 98.80 67 14 ASN A 11 ? ? -41.66 -77.54 68 14 GLU A 15 ? ? -29.82 137.03 69 14 ARG A 27 ? ? -162.11 106.69 70 15 LYS A 5 ? ? -178.41 36.64 71 15 VAL A 6 ? ? -43.78 159.09 72 15 GLU A 15 ? ? -36.49 145.88 73 15 ALA A 24 ? ? -80.61 -76.15 74 15 ARG A 27 ? ? -177.23 100.07 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 4 ? ? 0.317 'SIDE CHAIN' 2 1 ARG A 8 ? ? 0.267 'SIDE CHAIN' 3 1 ARG A 20 ? ? 0.285 'SIDE CHAIN' 4 1 ARG A 23 ? ? 0.183 'SIDE CHAIN' 5 1 ARG A 26 ? ? 0.306 'SIDE CHAIN' 6 1 ARG A 27 ? ? 0.313 'SIDE CHAIN' 7 2 ARG A 4 ? ? 0.230 'SIDE CHAIN' 8 2 ARG A 8 ? ? 0.311 'SIDE CHAIN' 9 2 ARG A 20 ? ? 0.197 'SIDE CHAIN' 10 2 ARG A 23 ? ? 0.214 'SIDE CHAIN' 11 2 ARG A 26 ? ? 0.311 'SIDE CHAIN' 12 2 ARG A 27 ? ? 0.180 'SIDE CHAIN' 13 3 ARG A 8 ? ? 0.270 'SIDE CHAIN' 14 3 ARG A 20 ? ? 0.181 'SIDE CHAIN' 15 3 ARG A 26 ? ? 0.277 'SIDE CHAIN' 16 3 ARG A 27 ? ? 0.247 'SIDE CHAIN' 17 4 ARG A 4 ? ? 0.202 'SIDE CHAIN' 18 4 ARG A 8 ? ? 0.271 'SIDE CHAIN' 19 4 ARG A 20 ? ? 0.202 'SIDE CHAIN' 20 4 ARG A 26 ? ? 0.317 'SIDE CHAIN' 21 4 ARG A 27 ? ? 0.150 'SIDE CHAIN' 22 5 ARG A 8 ? ? 0.284 'SIDE CHAIN' 23 5 ARG A 20 ? ? 0.294 'SIDE CHAIN' 24 5 ARG A 23 ? ? 0.239 'SIDE CHAIN' 25 5 ARG A 27 ? ? 0.089 'SIDE CHAIN' 26 6 ARG A 4 ? ? 0.250 'SIDE CHAIN' 27 6 ARG A 8 ? ? 0.310 'SIDE CHAIN' 28 6 ARG A 20 ? ? 0.180 'SIDE CHAIN' 29 6 ARG A 23 ? ? 0.269 'SIDE CHAIN' 30 6 ARG A 27 ? ? 0.217 'SIDE CHAIN' 31 7 ARG A 4 ? ? 0.202 'SIDE CHAIN' 32 7 ARG A 8 ? ? 0.293 'SIDE CHAIN' 33 7 ARG A 20 ? ? 0.207 'SIDE CHAIN' 34 7 ARG A 23 ? ? 0.310 'SIDE CHAIN' 35 7 ARG A 26 ? ? 0.106 'SIDE CHAIN' 36 7 ARG A 27 ? ? 0.222 'SIDE CHAIN' 37 8 ARG A 4 ? ? 0.108 'SIDE CHAIN' 38 8 ARG A 8 ? ? 0.211 'SIDE CHAIN' 39 8 ARG A 20 ? ? 0.222 'SIDE CHAIN' 40 8 ARG A 23 ? ? 0.273 'SIDE CHAIN' 41 8 ARG A 27 ? ? 0.315 'SIDE CHAIN' 42 9 ARG A 4 ? ? 0.300 'SIDE CHAIN' 43 9 ARG A 8 ? ? 0.231 'SIDE CHAIN' 44 9 ARG A 20 ? ? 0.224 'SIDE CHAIN' 45 9 ARG A 23 ? ? 0.317 'SIDE CHAIN' 46 9 ARG A 26 ? ? 0.124 'SIDE CHAIN' 47 9 ARG A 27 ? ? 0.318 'SIDE CHAIN' 48 10 ARG A 4 ? ? 0.272 'SIDE CHAIN' 49 10 ARG A 8 ? ? 0.317 'SIDE CHAIN' 50 10 ARG A 20 ? ? 0.299 'SIDE CHAIN' 51 10 ARG A 23 ? ? 0.288 'SIDE CHAIN' 52 10 ARG A 26 ? ? 0.306 'SIDE CHAIN' 53 10 ARG A 27 ? ? 0.185 'SIDE CHAIN' 54 11 ARG A 4 ? ? 0.264 'SIDE CHAIN' 55 11 ARG A 8 ? ? 0.211 'SIDE CHAIN' 56 11 ARG A 23 ? ? 0.315 'SIDE CHAIN' 57 11 ARG A 26 ? ? 0.303 'SIDE CHAIN' 58 11 ARG A 27 ? ? 0.215 'SIDE CHAIN' 59 12 ARG A 4 ? ? 0.278 'SIDE CHAIN' 60 12 ARG A 8 ? ? 0.280 'SIDE CHAIN' 61 12 ARG A 20 ? ? 0.274 'SIDE CHAIN' 62 12 ARG A 23 ? ? 0.262 'SIDE CHAIN' 63 12 ARG A 26 ? ? 0.248 'SIDE CHAIN' 64 12 ARG A 27 ? ? 0.274 'SIDE CHAIN' 65 13 ARG A 4 ? ? 0.316 'SIDE CHAIN' 66 13 ARG A 8 ? ? 0.207 'SIDE CHAIN' 67 13 ARG A 20 ? ? 0.265 'SIDE CHAIN' 68 13 ARG A 23 ? ? 0.240 'SIDE CHAIN' 69 13 ARG A 26 ? ? 0.258 'SIDE CHAIN' 70 13 ARG A 27 ? ? 0.198 'SIDE CHAIN' 71 14 ARG A 8 ? ? 0.258 'SIDE CHAIN' 72 14 ARG A 20 ? ? 0.308 'SIDE CHAIN' 73 14 ARG A 23 ? ? 0.199 'SIDE CHAIN' 74 14 ARG A 26 ? ? 0.307 'SIDE CHAIN' 75 14 ARG A 27 ? ? 0.087 'SIDE CHAIN' 76 15 ARG A 4 ? ? 0.300 'SIDE CHAIN' 77 15 ARG A 8 ? ? 0.310 'SIDE CHAIN' 78 15 ARG A 20 ? ? 0.110 'SIDE CHAIN' 79 15 ARG A 23 ? ? 0.237 'SIDE CHAIN' 80 15 ARG A 26 ? ? 0.105 'SIDE CHAIN' 81 15 ARG A 27 ? ? 0.262 'SIDE CHAIN' # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN #