HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 11-DEC-02 1NEI TITLE SOLUTION NMR STRUCTURE OF PROTEIN YOAG FROM ESCHERICHIA COLI. ONTARIO TITLE 2 CENTRE FOR STRUCTURAL PROTEOMICS TARGET EC0264_1_60; NORTHEAST TITLE 3 STRUCTURAL GENOMICS CONSORTIUM TARGET ET94. COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN YOAG; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS ALPHA/BETA PROTEIN, HOMODIMER, OCSP, NESG, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, STRUCTURAL GENOMICS, PSI, NORTHEAST STRUCTURAL GENOMICS KEYWDS 3 CONSORTIUM, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 19 AUTHOR B.WU,A.PINEDA-LUCENA,A.YEE,J.CORT,M.A.KENNEDY,A.M.EDWARDS, AUTHOR 2 C.H.ARROWSMITH,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 5 23-FEB-22 1NEI 1 REMARK REVDAT 4 24-FEB-09 1NEI 1 VERSN REVDAT 3 25-JAN-05 1NEI 1 AUTHOR KEYWDS REVDAT 2 12-OCT-04 1NEI 1 KEYWDS REMARK TITLE REVDAT 1 13-APR-04 1NEI 0 JRNL AUTH B.WU,A.PINEDA-LUCENA,A.YEE,J.CORT,M.A.KENNEDY,A.M.EDWARDS, JRNL AUTH 2 C.H.ARROWSMITH JRNL TITL SOLUTION STRUCTURE OF HYPOTHETICAL PROTEIN DIMER ENCODED BY JRNL TITL 2 THE YOAG GENE FROM ESCHERICHIA COLI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 1.0.5, CYANA 1.0.5 REMARK 3 AUTHORS : GUNTER, P. (CYANA), GUNTER, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 2609 NOE-DERIVED DISTANCE CONSTRAINTS, REMARK 3 180 DIHEDRAL ANGLE CONSTRAINTS (PHI AND PSI) REMARK 4 REMARK 4 1NEI COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-DEC-02. REMARK 100 THE DEPOSITION ID IS D_1000017805. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 450 MM NACL, 25 MM PHOSPHATE REMARK 210 BUFFER REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM EC264, U-15N, 13C; 450 MM REMARK 210 NACL, 25 MM NA2PO4, 1 MM REMARK 210 BENZAMIDINE, 1 X INHIBITOR REMARK 210 COCKTAIL, 0.01% NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 19 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY,TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO B 232 H ALA B 236 1.43 REMARK 500 O PRO A 32 H ALA A 36 1.46 REMARK 500 O LYS B 240 H ASN B 244 1.47 REMARK 500 O LYS A 40 H ASN A 44 1.48 REMARK 500 H ASN A 12 O VAL A 17 1.55 REMARK 500 H VAL B 210 O VAL B 219 1.58 REMARK 500 O GLU B 237 H ASP B 241 1.58 REMARK 500 H VAL A 10 O VAL A 19 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 26 -90.85 -75.11 REMARK 500 1 GLU A 52 -57.57 80.23 REMARK 500 1 GLU A 54 83.03 27.07 REMARK 500 1 HIS A 55 147.69 80.33 REMARK 500 1 CYS A 58 -72.52 -153.68 REMARK 500 1 PRO B 226 -84.03 -75.01 REMARK 500 1 CYS B 258 58.44 -163.34 REMARK 500 2 PRO A 26 -87.46 -74.97 REMARK 500 2 GLU A 54 51.46 -114.19 REMARK 500 2 HIS A 55 -57.77 -146.56 REMARK 500 2 CYS A 58 -46.75 -163.46 REMARK 500 2 PRO B 226 -84.54 -75.08 REMARK 500 2 CYS B 258 161.65 62.04 REMARK 500 3 PRO A 26 -88.79 -74.98 REMARK 500 3 GLU A 52 -61.11 75.20 REMARK 500 3 GLU A 54 163.42 -49.62 REMARK 500 3 HIS A 55 99.15 51.35 REMARK 500 3 CYS A 58 88.46 -69.88 REMARK 500 3 PRO B 226 -83.73 -75.10 REMARK 500 3 CYS B 258 154.98 69.41 REMARK 500 4 PRO A 26 -90.29 -75.03 REMARK 500 4 GLU A 52 -96.68 -61.08 REMARK 500 4 HIS A 55 -74.37 -167.94 REMARK 500 4 CYS A 58 -62.39 -133.52 REMARK 500 4 PRO B 226 -86.03 -74.95 REMARK 500 4 GLU B 252 53.67 -95.66 REMARK 500 4 GLU B 254 -157.60 37.98 REMARK 500 4 HIS B 255 -65.32 -173.53 REMARK 500 4 CYS B 258 -64.56 -120.57 REMARK 500 5 PRO A 26 -91.10 -75.05 REMARK 500 5 HIS A 55 67.18 161.43 REMARK 500 5 CYS A 58 56.19 -148.32 REMARK 500 5 PRO B 226 -84.63 -74.98 REMARK 500 5 HIS B 255 149.25 63.53 REMARK 500 6 PRO A 26 -87.53 -75.02 REMARK 500 6 HIS A 55 -80.55 -151.49 REMARK 500 6 CYS A 58 -56.05 -135.32 REMARK 500 6 PRO B 226 -83.20 -75.10 REMARK 500 6 ASP B 250 65.43 -104.27 REMARK 500 6 HIS B 255 -61.01 73.20 REMARK 500 7 PRO A 26 -85.46 -74.98 REMARK 500 7 GLU A 52 101.29 54.01 REMARK 500 7 HIS A 55 -74.85 -173.90 REMARK 500 7 CYS A 58 -59.73 -126.24 REMARK 500 7 PRO B 226 -83.45 -75.04 REMARK 500 7 HIS B 255 133.90 -175.65 REMARK 500 7 CYS B 258 69.13 -113.60 REMARK 500 8 PRO A 26 -88.27 -75.00 REMARK 500 8 ASP A 50 85.10 -151.96 REMARK 500 8 GLU A 54 72.10 -112.52 REMARK 500 REMARK 500 THIS ENTRY HAS 116 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: ET94 RELATED DB: TARGETDB DBREF 1NEI A 1 60 UNP P64496 YOAG_ECOLI 1 60 DBREF 1NEI B 201 260 UNP P64496 YOAG_ECOLI 1 60 SEQRES 1 A 60 MET GLY LYS ALA THR TYR THR VAL THR VAL THR ASN ASN SEQRES 2 A 60 SER ASN GLY VAL SER VAL ASP TYR GLU THR GLU THR PRO SEQRES 3 A 60 MET THR LEU LEU VAL PRO GLU VAL ALA ALA GLU VAL ILE SEQRES 4 A 60 LYS ASP LEU VAL ASN THR VAL ARG SER TYR ASP THR GLU SEQRES 5 A 60 ASN GLU HIS ASP VAL CYS GLY TRP SEQRES 1 B 60 MET GLY LYS ALA THR TYR THR VAL THR VAL THR ASN ASN SEQRES 2 B 60 SER ASN GLY VAL SER VAL ASP TYR GLU THR GLU THR PRO SEQRES 3 B 60 MET THR LEU LEU VAL PRO GLU VAL ALA ALA GLU VAL ILE SEQRES 4 B 60 LYS ASP LEU VAL ASN THR VAL ARG SER TYR ASP THR GLU SEQRES 5 B 60 ASN GLU HIS ASP VAL CYS GLY TRP HELIX 1 1 PRO A 26 LEU A 30 5 5 HELIX 2 2 VAL A 31 TYR A 49 1 19 HELIX 3 3 MET B 227 LEU B 230 5 4 HELIX 4 4 VAL B 231 TYR B 249 1 19 SHEET 1 A 4 SER A 18 GLU A 22 0 SHEET 2 A 4 TYR A 6 ASN A 12 -1 N VAL A 10 O VAL A 19 SHEET 3 A 4 TYR B 206 ASN B 212 -1 O THR B 207 N THR A 11 SHEET 4 A 4 SER B 218 THR B 223 -1 O VAL B 219 N VAL B 210 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1