data_1NKL # _entry.id 1NKL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1NKL pdb_00001nkl 10.2210/pdb1nkl/pdb WWPDB D_1000175320 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1NKL _pdbx_database_status.recvd_initial_deposition_date 1997-04-17 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Otting, G.' 1 'Liepinsh, E.' 2 # _citation.id primary _citation.title 'Saposin fold revealed by the NMR structure of NK-lysin.' _citation.journal_abbrev Nat.Struct.Biol. _citation.journal_volume 4 _citation.page_first 793 _citation.page_last 795 _citation.year 1997 _citation.journal_id_ASTM NSBIEW _citation.country US _citation.journal_id_ISSN 1072-8368 _citation.journal_id_CSD 2024 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9334742 _citation.pdbx_database_id_DOI 10.1038/nsb1097-793 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liepinsh, E.' 1 ? primary 'Andersson, M.' 2 ? primary 'Ruysschaert, J.M.' 3 ? primary 'Otting, G.' 4 ? # _cell.entry_id 1NKL _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NKL _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description NK-LYSIN _entity.formula_weight 8945.699 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details 'ACTIVE BY MEMBRANE-BINDING' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GYFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKILRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICKE _entity_poly.pdbx_seq_one_letter_code_can GYFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKILRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICKE _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 TYR n 1 3 PHE n 1 4 CYS n 1 5 GLU n 1 6 SER n 1 7 CYS n 1 8 ARG n 1 9 LYS n 1 10 ILE n 1 11 ILE n 1 12 GLN n 1 13 LYS n 1 14 LEU n 1 15 GLU n 1 16 ASP n 1 17 MET n 1 18 VAL n 1 19 GLY n 1 20 PRO n 1 21 GLN n 1 22 PRO n 1 23 ASN n 1 24 GLU n 1 25 ASP n 1 26 THR n 1 27 VAL n 1 28 THR n 1 29 GLN n 1 30 ALA n 1 31 ALA n 1 32 SER n 1 33 GLN n 1 34 VAL n 1 35 CYS n 1 36 ASP n 1 37 LYS n 1 38 LEU n 1 39 LYS n 1 40 ILE n 1 41 LEU n 1 42 ARG n 1 43 GLY n 1 44 LEU n 1 45 CYS n 1 46 LYS n 1 47 LYS n 1 48 ILE n 1 49 MET n 1 50 ARG n 1 51 SER n 1 52 PHE n 1 53 LEU n 1 54 ARG n 1 55 ARG n 1 56 ILE n 1 57 SER n 1 58 TRP n 1 59 ASP n 1 60 ILE n 1 61 LEU n 1 62 THR n 1 63 GLY n 1 64 LYS n 1 65 LYS n 1 66 PRO n 1 67 GLN n 1 68 ALA n 1 69 ILE n 1 70 CYS n 1 71 VAL n 1 72 ASP n 1 73 ILE n 1 74 LYS n 1 75 ILE n 1 76 CYS n 1 77 LYS n 1 78 GLU n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name pig _entity_src_nat.pdbx_organism_scientific 'Sus scrofa' _entity_src_nat.pdbx_ncbi_taxonomy_id 9823 _entity_src_nat.genus Sus _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ INTESTINE _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NKL_PIG _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession Q29075 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;PGLAFSGLTPEHSALARAHPCDGEQFCQNLAPEDPQGDQLLQREELGLICESCRKIIQKLEDMVGPQPNEDTVTQAASRV CDKMKILRGVCKKIMRTFLRRISKDILTGKKPQAICVDIKICKEKTGLI ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1NKL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 78 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q29075 _struct_ref_seq.db_align_beg 47 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 124 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 78 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1NKL TYR A 2 ? UNP Q29075 LEU 48 conflict 2 1 1 1NKL PHE A 3 ? UNP Q29075 ILE 49 conflict 3 2 1 1NKL GLN A 33 ? UNP Q29075 ARG 79 conflict 33 3 1 1NKL LEU A 38 ? UNP Q29075 MET 84 conflict 38 4 1 1NKL LEU A 44 ? UNP Q29075 VAL 90 conflict 44 5 1 1NKL SER A 51 ? UNP Q29075 THR 97 conflict 51 6 1 1NKL TRP A 58 ? UNP Q29075 LYS 104 conflict 58 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 NOESY 1 2 1 COSY 1 3 1 TOCSY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 309 _pdbx_nmr_exptl_sample_conditions.pressure ? _pdbx_nmr_exptl_sample_conditions.pH 5.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength 1 DMX600 Bruker 600 2 UNITY750 Varian 750 # _pdbx_nmr_refine.entry_id 1NKL _pdbx_nmr_refine.method 'VARIABLE TARGET FUNCTION' _pdbx_nmr_refine.details ;USING DEFAULT PARAMETERS PROVIDED BY THE PROGRAM WITH RESTRAINTS FOR PEPTIDE BOND PLANARITY. PROGRAM DIANA BY GUNTERT, BRAUN, WUTHRICH ALSO WAS USED. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1NKL _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'LEAST RESTRAINT VIOLATION' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement OPAL ? LUGINBUHL,GUNTERT,BILLETER,WUTHRICH 1 'structure solution' DIANA ? ? 2 'structure solution' OPAL ? ? 3 # _exptl.entry_id 1NKL _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1NKL _struct.title 'NK-LYSIN FROM PIG, NMR, 20 STRUCTURES' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1NKL _struct_keywords.pdbx_keywords 'SAPOSIN FOLD' _struct_keywords.text 'SAPOSIN FOLD, ANTIBACTERIAL PEPTIDE, TUMOUROLYTIC PEPTIDE' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag Y _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 3 ? VAL A 18 ? PHE A 3 VAL A 18 1 ? 16 HELX_P HELX_P2 2 GLU A 24 ? LYS A 37 ? GLU A 24 LYS A 37 1 ? 14 HELX_P HELX_P3 3 ARG A 42 ? SER A 51 ? ARG A 42 SER A 51 1 ? 10 HELX_P HELX_P4 4 LEU A 53 ? LEU A 61 ? LEU A 53 LEU A 61 1 ? 9 HELX_P HELX_P5 5 PRO A 66 ? ASP A 72 ? PRO A 66 ASP A 72 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 4 SG ? ? ? 1_555 A CYS 76 SG ? ? A CYS 4 A CYS 76 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf2 disulf ? ? A CYS 7 SG ? ? ? 1_555 A CYS 70 SG ? ? A CYS 7 A CYS 70 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf3 disulf ? ? A CYS 35 SG ? ? ? 1_555 A CYS 45 SG ? ? A CYS 35 A CYS 45 1_555 ? ? ? ? ? ? ? 2.012 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1NKL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1NKL _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 TYR 2 2 2 TYR TYR A . n A 1 3 PHE 3 3 3 PHE PHE A . n A 1 4 CYS 4 4 4 CYS CYS A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 CYS 7 7 7 CYS CYS A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 GLN 12 12 12 GLN GLN A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 MET 17 17 17 MET MET A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 PRO 22 22 22 PRO PRO A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 GLN 29 29 29 GLN GLN A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 GLN 33 33 33 GLN GLN A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 CYS 35 35 35 CYS CYS A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 ILE 40 40 40 ILE ILE A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 CYS 45 45 45 CYS CYS A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 MET 49 49 49 MET MET A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 PHE 52 52 52 PHE PHE A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 TRP 58 58 58 TRP TRP A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 PRO 66 66 66 PRO PRO A . n A 1 67 GLN 67 67 67 GLN GLN A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 CYS 70 70 70 CYS CYS A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 ASP 72 72 72 ASP ASP A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 ILE 75 75 75 ILE ILE A . n A 1 76 CYS 76 76 76 CYS CYS A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 GLU 78 78 78 GLU GLU A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-06-16 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE1 A GLU 24 ? ? HG A SER 57 ? ? 1.54 2 2 OE1 A GLU 24 ? ? HG A SER 57 ? ? 1.54 3 2 HD2 A ASP 59 ? ? OD2 A ASP 72 ? ? 1.59 4 5 OE2 A GLU 24 ? ? HG A SER 57 ? ? 1.58 5 6 OE2 A GLU 24 ? ? HG A SER 57 ? ? 1.58 6 8 OE2 A GLU 24 ? ? HG A SER 57 ? ? 1.59 7 9 OE1 A GLU 24 ? ? HG A SER 57 ? ? 1.55 8 10 OE1 A GLU 24 ? ? HG A SER 57 ? ? 1.56 9 11 OE1 A GLU 24 ? ? HG A SER 57 ? ? 1.54 10 12 OE1 A GLU 24 ? ? HG A SER 57 ? ? 1.59 11 13 OE1 A GLU 24 ? ? HG A SER 57 ? ? 1.55 12 15 OE2 A GLU 24 ? ? HG A SER 57 ? ? 1.58 13 16 OE2 A GLU 24 ? ? HG A SER 57 ? ? 1.58 14 17 OE1 A GLU 24 ? ? HG A SER 57 ? ? 1.55 15 19 OE2 A GLU 24 ? ? HG A SER 57 ? ? 1.59 16 20 OE1 A GLU 24 ? ? HG A SER 57 ? ? 1.56 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A VAL 34 ? ? CB A VAL 34 ? ? CG1 A VAL 34 ? ? 121.61 110.90 10.71 1.50 N 2 2 CA A VAL 34 ? ? CB A VAL 34 ? ? CG1 A VAL 34 ? ? 120.93 110.90 10.03 1.50 N 3 3 CA A VAL 34 ? ? CB A VAL 34 ? ? CG1 A VAL 34 ? ? 120.57 110.90 9.67 1.50 N 4 4 CA A VAL 34 ? ? CB A VAL 34 ? ? CG1 A VAL 34 ? ? 120.06 110.90 9.16 1.50 N 5 5 CA A VAL 34 ? ? CB A VAL 34 ? ? CG1 A VAL 34 ? ? 120.12 110.90 9.22 1.50 N 6 5 CB A ASP 36 ? ? CG A ASP 36 ? ? OD2 A ASP 36 ? ? 112.32 118.30 -5.98 0.90 N 7 6 CA A VAL 34 ? ? CB A VAL 34 ? ? CG1 A VAL 34 ? ? 121.97 110.90 11.07 1.50 N 8 7 CA A VAL 34 ? ? CB A VAL 34 ? ? CG1 A VAL 34 ? ? 120.08 110.90 9.18 1.50 N 9 8 CA A VAL 34 ? ? CB A VAL 34 ? ? CG1 A VAL 34 ? ? 119.91 110.90 9.01 1.50 N 10 9 CA A VAL 34 ? ? CB A VAL 34 ? ? CG1 A VAL 34 ? ? 120.80 110.90 9.90 1.50 N 11 9 CB A ASP 59 ? ? CG A ASP 59 ? ? OD2 A ASP 59 ? ? 124.73 118.30 6.43 0.90 N 12 10 CA A VAL 34 ? ? CB A VAL 34 ? ? CG1 A VAL 34 ? ? 122.04 110.90 11.14 1.50 N 13 10 CB A ASP 59 ? ? CG A ASP 59 ? ? OD2 A ASP 59 ? ? 123.71 118.30 5.41 0.90 N 14 11 CA A VAL 34 ? ? CB A VAL 34 ? ? CG1 A VAL 34 ? ? 121.95 110.90 11.05 1.50 N 15 11 CB A ASP 59 ? ? CG A ASP 59 ? ? OD2 A ASP 59 ? ? 123.71 118.30 5.41 0.90 N 16 12 CA A VAL 34 ? ? CB A VAL 34 ? ? CG1 A VAL 34 ? ? 121.59 110.90 10.69 1.50 N 17 13 CA A VAL 34 ? ? CB A VAL 34 ? ? CG1 A VAL 34 ? ? 121.63 110.90 10.73 1.50 N 18 14 CA A VAL 34 ? ? CB A VAL 34 ? ? CG1 A VAL 34 ? ? 121.35 110.90 10.45 1.50 N 19 15 CA A VAL 34 ? ? CB A VAL 34 ? ? CG1 A VAL 34 ? ? 120.93 110.90 10.03 1.50 N 20 16 CA A VAL 34 ? ? CB A VAL 34 ? ? CG1 A VAL 34 ? ? 121.37 110.90 10.47 1.50 N 21 16 CB A ASP 36 ? ? CG A ASP 36 ? ? OD1 A ASP 36 ? ? 112.44 118.30 -5.86 0.90 N 22 17 CA A VAL 34 ? ? CB A VAL 34 ? ? CG1 A VAL 34 ? ? 120.87 110.90 9.97 1.50 N 23 18 CA A VAL 34 ? ? CB A VAL 34 ? ? CG1 A VAL 34 ? ? 120.97 110.90 10.07 1.50 N 24 18 CB A LYS 39 ? ? CA A LYS 39 ? ? C A LYS 39 ? ? 123.79 110.40 13.39 2.00 N 25 19 CA A VAL 34 ? ? CB A VAL 34 ? ? CG1 A VAL 34 ? ? 121.50 110.90 10.60 1.50 N 26 20 CA A VAL 34 ? ? CB A VAL 34 ? ? CG1 A VAL 34 ? ? 121.79 110.90 10.89 1.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 2 ? ? 57.91 -60.36 2 1 PHE A 3 ? ? -29.41 -38.56 3 1 GLN A 21 ? ? 20.15 66.34 4 1 ILE A 40 ? ? 75.17 -64.92 5 1 PHE A 52 ? ? -144.06 39.77 6 1 LYS A 74 ? ? 65.91 73.40 7 1 CYS A 76 ? ? -83.24 -94.09 8 1 LYS A 77 ? ? 172.67 80.65 9 2 GLN A 21 ? ? -0.45 79.21 10 2 ILE A 40 ? ? 74.44 -61.75 11 2 LEU A 53 ? ? -61.04 -70.53 12 2 LYS A 74 ? ? 68.22 77.49 13 2 CYS A 76 ? ? -83.60 -83.89 14 2 LYS A 77 ? ? -149.61 54.80 15 3 PHE A 3 ? ? -38.46 -38.63 16 3 GLN A 21 ? ? 33.49 60.18 17 3 PRO A 22 ? ? -78.90 -162.66 18 3 ILE A 40 ? ? 68.89 -69.18 19 3 PHE A 52 ? ? -144.16 38.52 20 3 LYS A 74 ? ? 61.52 81.47 21 3 CYS A 76 ? ? -83.78 -103.53 22 3 LYS A 77 ? ? -173.76 82.19 23 4 TYR A 2 ? ? 61.38 -47.58 24 4 GLN A 21 ? ? 22.31 65.88 25 4 PRO A 22 ? ? -78.20 -167.75 26 4 ILE A 40 ? ? 69.71 -61.63 27 4 PHE A 52 ? ? -148.79 38.40 28 4 THR A 62 ? ? -89.07 30.15 29 4 LYS A 74 ? ? 69.62 76.78 30 4 ILE A 75 ? ? -141.52 -27.00 31 5 GLN A 21 ? ? -28.00 93.06 32 5 ILE A 40 ? ? 75.82 -60.85 33 5 PHE A 52 ? ? -143.86 39.23 34 5 LYS A 74 ? ? 72.86 87.03 35 5 CYS A 76 ? ? -88.67 -87.69 36 5 LYS A 77 ? ? -156.99 71.20 37 6 GLN A 21 ? ? 29.22 59.53 38 6 ILE A 40 ? ? 79.10 -49.90 39 6 LYS A 74 ? ? 69.08 80.45 40 6 ILE A 75 ? ? -140.91 -24.07 41 6 CYS A 76 ? ? -84.17 -84.58 42 6 LYS A 77 ? ? -163.11 69.01 43 7 TYR A 2 ? ? 61.50 -60.20 44 7 PHE A 3 ? ? -29.34 -38.92 45 7 GLN A 21 ? ? 34.85 58.99 46 7 ILE A 40 ? ? 81.07 -52.61 47 7 LYS A 74 ? ? 61.81 75.98 48 7 CYS A 76 ? ? -82.90 -100.86 49 7 LYS A 77 ? ? -171.01 71.23 50 8 TYR A 2 ? ? 61.55 -48.43 51 8 ILE A 40 ? ? 81.21 -52.78 52 8 PHE A 52 ? ? -143.22 38.44 53 8 LYS A 74 ? ? 62.56 83.76 54 8 ILE A 75 ? ? -141.39 -19.05 55 8 CYS A 76 ? ? -83.35 -92.64 56 9 GLN A 21 ? ? 33.35 59.23 57 9 PRO A 22 ? ? -78.99 -167.67 58 9 ILE A 40 ? ? 81.12 -54.44 59 9 PHE A 52 ? ? -150.97 38.02 60 9 LYS A 74 ? ? 70.79 78.75 61 9 ILE A 75 ? ? -140.91 -26.13 62 10 PHE A 3 ? ? -39.28 -38.50 63 10 GLN A 21 ? ? -18.22 88.62 64 10 ILE A 40 ? ? 81.16 -62.72 65 10 PHE A 52 ? ? -154.92 38.78 66 10 LYS A 74 ? ? 72.77 85.60 67 10 CYS A 76 ? ? -83.56 -89.54 68 10 LYS A 77 ? ? -161.03 77.47 69 11 PHE A 3 ? ? -36.07 -38.54 70 11 GLN A 21 ? ? 5.44 75.11 71 11 ILE A 40 ? ? 75.41 -59.84 72 11 PHE A 52 ? ? -142.07 40.99 73 11 LYS A 74 ? ? 79.99 80.92 74 11 ILE A 75 ? ? -140.70 -22.95 75 11 CYS A 76 ? ? -83.88 -92.60 76 11 LYS A 77 ? ? -164.82 77.84 77 12 GLN A 21 ? ? 26.14 62.15 78 12 PRO A 22 ? ? -79.44 -168.47 79 12 ILE A 40 ? ? 75.56 -57.69 80 12 LYS A 74 ? ? 59.42 85.47 81 12 CYS A 76 ? ? -108.64 -156.33 82 13 ILE A 40 ? ? 80.83 -58.82 83 13 PHE A 52 ? ? -145.75 39.00 84 13 LYS A 74 ? ? 70.29 69.43 85 13 CYS A 76 ? ? -86.64 -158.60 86 14 GLN A 21 ? ? -14.60 87.97 87 14 ILE A 40 ? ? 80.93 -57.09 88 14 PHE A 52 ? ? -144.05 51.05 89 14 LYS A 74 ? ? 58.31 81.05 90 14 ILE A 75 ? ? -140.93 -19.61 91 15 ILE A 40 ? ? 80.79 -61.74 92 15 LYS A 74 ? ? 58.83 84.93 93 15 ILE A 75 ? ? -140.79 -22.46 94 16 GLN A 21 ? ? 30.15 58.91 95 16 ILE A 40 ? ? 75.24 -64.21 96 16 PHE A 52 ? ? -143.82 38.40 97 16 LYS A 74 ? ? 69.55 75.55 98 16 ILE A 75 ? ? -141.01 -19.87 99 16 CYS A 76 ? ? -83.66 -87.15 100 16 LYS A 77 ? ? -152.37 71.08 101 17 TYR A 2 ? ? 64.68 -42.12 102 17 ILE A 40 ? ? 72.76 -58.40 103 17 PHE A 52 ? ? -141.35 38.35 104 17 LYS A 74 ? ? 61.54 82.27 105 17 ILE A 75 ? ? -141.20 -20.42 106 17 LYS A 77 ? ? 145.30 81.26 107 18 GLN A 21 ? ? 31.82 58.98 108 18 ILE A 40 ? ? 81.15 -57.62 109 18 LYS A 74 ? ? 63.75 66.77 110 18 CYS A 76 ? ? -83.49 -87.00 111 18 LYS A 77 ? ? -169.02 64.34 112 19 GLN A 21 ? ? 35.04 59.41 113 19 PRO A 22 ? ? -77.26 -167.91 114 19 ILE A 40 ? ? 70.79 -56.88 115 19 PHE A 52 ? ? -142.56 38.79 116 19 LYS A 74 ? ? 58.65 76.53 117 19 LYS A 77 ? ? 57.66 82.08 118 20 TYR A 2 ? ? 62.19 -41.23 119 20 ILE A 40 ? ? 78.47 -57.24 120 20 PHE A 52 ? ? -140.85 38.94 121 20 LYS A 74 ? ? 66.32 73.65 122 20 ILE A 75 ? ? -140.97 -19.29 123 20 CYS A 76 ? ? -103.24 -98.68 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 3 _pdbx_validate_main_chain_plane.auth_comp_id LYS _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 77 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 10.96 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 TYR A 2 ? ? 0.122 'SIDE CHAIN' 2 1 ASP A 16 ? ? 0.088 'SIDE CHAIN' 3 2 TYR A 2 ? ? 0.076 'SIDE CHAIN' 4 2 ARG A 42 ? ? 0.092 'SIDE CHAIN' 5 3 TYR A 2 ? ? 0.117 'SIDE CHAIN' 6 3 ARG A 54 ? ? 0.102 'SIDE CHAIN' 7 5 TYR A 2 ? ? 0.110 'SIDE CHAIN' 8 8 ASP A 16 ? ? 0.080 'SIDE CHAIN' 9 9 ASP A 16 ? ? 0.078 'SIDE CHAIN' 10 10 TYR A 2 ? ? 0.113 'SIDE CHAIN' 11 11 TYR A 2 ? ? 0.130 'SIDE CHAIN' 12 11 ARG A 54 ? ? 0.084 'SIDE CHAIN' 13 12 ASP A 16 ? ? 0.104 'SIDE CHAIN' 14 12 ARG A 42 ? ? 0.078 'SIDE CHAIN' 15 13 ASP A 16 ? ? 0.097 'SIDE CHAIN' 16 14 ASP A 16 ? ? 0.083 'SIDE CHAIN' 17 15 ASP A 16 ? ? 0.077 'SIDE CHAIN' 18 15 ARG A 42 ? ? 0.079 'SIDE CHAIN' 19 16 ASP A 16 ? ? 0.074 'SIDE CHAIN' 20 17 TYR A 2 ? ? 0.100 'SIDE CHAIN' 21 18 ASP A 16 ? ? 0.087 'SIDE CHAIN' #