HEADER MEMBRANE PROTEIN 10-JAN-03 1NMJ TITLE THE SOLUTION STRUCTURE OF RAT AB-(1-28) AND ITS INTERACTION WITH ZINC: TITLE 2 INSIGHTS INTO THE SCARITY OF AMYLOID DEPOSITION IN AGED RAT BRAIN CAVEAT 1NMJ THERE ARE SEVERAL CHIRALITY ERRORS AT THE CA CENTER. COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMYLOID BETA-PEPTIDE FROM ALZHEIMER'S DISEASE AMYLOID A4 COMPND 3 PROTEIN HOMOLOG; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCOPROTEIN, AMYLOID, MEMBRANE PROTEIN EXPDTA SOLUTION NMR AUTHOR J.HUANG,Y.YAO,W.X.TANG REVDAT 4 23-FEB-22 1NMJ 1 REMARK REVDAT 3 24-FEB-09 1NMJ 1 VERSN REVDAT 2 03-MAY-05 1NMJ 1 AUTHOR JRNL REVDAT 1 28-JAN-03 1NMJ 0 JRNL AUTH J.HUANG,Y.YAO,J.LIN,Y.H.YE,W.Y.SUN,W.X.TANG JRNL TITL THE SOLUTION STRUCTURE OF RAT ABETA-(1-28) AND ITS JRNL TITL 2 INTERACTION WITH ZINC ION: INSIGHTS INTO THE SCARCITY OF JRNL TITL 3 AMYLOID DEPOSITION IN AGED RAT BRAIN JRNL REF J.BIOL.INORG.CHEM. V. 9 627 2004 JRNL REFN ISSN 0949-8257 JRNL PMID 15160315 JRNL DOI 10.1007/S00775-004-0556-X REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1NMJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-JAN-03. REMARK 100 THE DEPOSITION ID IS D_1000018005. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : 2MM RAT AB-(1-28) REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D TOCSY; DQF-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 3 46.03 -72.57 REMARK 500 PHE A 10 -79.42 1.33 REMARK 500 VAL A 12 -75.42 37.01 REMARK 500 ARG A 13 33.17 -70.51 REMARK 500 HIS A 14 12.07 54.72 REMARK 500 GLN A 15 -62.88 58.60 REMARK 500 PHE A 19 -82.56 -77.65 REMARK 500 ASN A 27 -103.56 -0.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 26 ASN A 27 148.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1AMB RELATED DB: PDB REMARK 900 RELATED ID: 1AMC RELATED DB: PDB REMARK 900 RELATED ID: 1BJB RELATED DB: PDB REMARK 900 RELATED ID: 1BJC RELATED DB: PDB DBREF 1NMJ A 1 28 UNP P08592 A4_RAT 672 699 SEQRES 1 A 28 ASP ALA GLU PHE GLY HIS ASP SER GLY PHE GLU VAL ARG SEQRES 2 A 28 HIS GLN LYS LEU VAL PHE PHE ALA GLU ASP VAL GLY SER SEQRES 3 A 28 ASN LYS HELIX 1 1 GLN A 15 GLY A 25 1 11 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000